BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483883
Length=3341
Score E
Sequences producing significant alignments: (Bits) Value
AT2G47070.1 | Symbols: SPL1 | squamosa promoter binding protein... 4274 0.0
AT3G60030.1 | Symbols: SPL12 | squamosa promoter-binding protei... 1487 0.0
> AT2G47070.1 | Symbols: SPL1 | squamosa promoter binding protein-like
1 | chr2:19336695-19340869 FORWARD LENGTH=3412
Length=3412
Score = 4274 bits (2314), Expect = 0.0
Identities = 2745/2935 (94%), Gaps = 102/2935 (3%)
Strand=Plus/Plus
Query 416 GGTCCGTAGGTAAGACAAGTGTGGAGTGGGATTTGAATGATTGGAAATGGGATGGTGATC 475
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 GGTCCGTAGGTAAAAGAAGTGTGGAGTGGGATTTGAATGATTGGAAATGGGATGGTGATC 555
Query 476 TCTTTCTCGCTACTCAATTGAATCCTGCCGCCAGCGAAACTACGGGG-CGTCAGCTTTTC 534
|||||||||| || | | || || |||| |||| |||||| |||||
Sbjct 556 TCTTTCTCGCCAC-CCA---AA--CT------------ACTA-GGGGACGTCAGTTTTTC 596
Query 535 CCTCTAGGAAACTCGTCCAATAGCTCCTCCTCCTGCTCTGATGAAGGGAATAATACTAAT 594
||||||||||||||||||||||||||||||||||||||||||||| || | |
Sbjct 597 CCTCTAGGAAACTCGTCCAATAGCTCCTCCTCCTGCTCTGATGAA-GG-------C--A- 645
Query 595 ATGGTTGAGAAGAAGAGGAGAGCTGTTGCCATACAAGGAGACAGTAATGCTGCTGGTGGT 654
| ||| ||||||||||||||||||||||| |||||||||| ||| ||||| |
Sbjct 646 A----TGACAAGAAGAGGAGAGCTGTTGCCATTCAAGGAGACACTAA------TGGTGCT 695
Query 655 CTTACTTTGAAGC-T--TGGAGACAA-TGCTTGTCATCTTAATGCTGCCAAGAAGACCAA 710
||||||||||| | | ||| || || || || | ||| | ||||||||||||||||
Sbjct 696 CTTACTTTGAATCTTAATGGTGA-AAGTG-ATGGC--CTTTTTCCTGCCAAGAAGACCAA 751
Query 711 ATTCGGAGCAGCCGTTTGTCAGGTGGAAAACTGTGAAGCTGATCTTAGTAAAGTTAAGGA 770
| || | | ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 752 A-TCCG-G-AGCCGTTTGTCAGGTCGAAAACTGTGAAGCTGATCTTAGTAAAGTTAAGGA 808
Query 771 TTATCATAGACGTCATAAGGTCTGTGAGATGCATTCCAAGGCTACTAGTGCCATTGTCGG 830
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 809 TTATCATAGACGCCATAAGGTCTGTGAGATGCATTCCAAGGCTACTAGTGCCACTGTCGG 868
Query 831 AGGTATCTTGCAGCGCTTTTGTCAGCAATGTAGTAGGTTCCATCTTCTTCAGGAGTTTGA 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 AGGTATCTTGCAGCGCTTTTGTCAGCAATGTAGTAGGTTCCATCTTCTTCAGGAGTTTGA 928
Query 891 TGAAGGAAAGAGAAGTTGTCGTAGACGTTTGGCTGGGCATAATAAACGTAGGAGGAAAAC 950
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 929 TGAAGGAAAGAGAAGTTGTCGTAGACGTTTGGCTGGCCATAATAAACGTCGGAGGAAAAC 988
Query 951 AAATCCTGAACCTGGCGCTAACGGGAATCCTAGTGATGATCAGTCAAGCAACTATCTCTT 1010
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 989 AAATCCCGAACCTGGCGCTAACGGGAATCCTAGTGATGATCACTCAAGCAACTATCTCTT 1048
Query 1011 GATTAGTCTCTTGAAGATACTCTCCAATATGCATAACCATACCGGTGATCAAGATTTGAT 1070
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 GATTACTCTCTTGAAGATACTCTCCAATATGCATAACCATACCGGTGATCAAGATTTGAT 1108
Query 1071 GTCTCATCTTCTGAAGAGCCTCGTAAGCCATGCTGGTGAACAGTTAGGGAAAAACTTAGT 1130
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1109 GTCTCATCTTCTGAAGAGCCTCGTAAGCCATGCTGGCGAACAGTTAGGGAAAAACTTAGT 1168
Query 1131 TGAACTTCTTCTAC-A--AGGAGGATCTCAAGGTTCCTTAAATATTGGAAACTCGGCTTT 1187
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169 TGAACTTCTTCTACAAGGAGGAGGATCTCAAGGTTCCTTAAATATTGGAAACTCGGCTTT 1228
Query 1188 GCTTGGAATTGAGCAAGCTCCTCAAGAGGATTTAAAGCAACTTTCGGTAAACGTACCTCG 1247
|||||| ||||||||||||||||||||||| ||||||||| ||| | || ||||
Sbjct 1229 GCTTGGGATTGAGCAAGCTCCTCAAGAGGAGTTAAAGCAA-TTT---T---CG--GCTCG 1279
Query 1248 GCAAGATGGGACAGCTACCGAGACCAGATCAGAAAAACAAGTCAAAATGAATGATTTTGA 1307
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1280 GCAAGATGGGACAGCTACCGAGAACAGATCAGAAAAACAAGTCAAAATGAATGATTTTGA 1339
Query 1308 TTTGAATGATATTTATATAGACTCAGATGACACAGATATCGAAAGATCTCCTCCTCCAAC 1367
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1340 TTTGAATGATATCTATATAGACTCAGATGACACAGACGTCGAAAGATCTCCTCCTCCAAC 1399
Query 1368 CAATCCAGCAACCAGTTCTCTTGATTATCCTTCATGGATACATCAGTCTAGTCCACCTCA 1427
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1400 GAATCCAGCGACCAGTTCTCTTGATTATCCTTCATGGATACATCAGTCTAGTCCGCCTCA 1459
Query 1428 GACAAGTAGGAATTCAGATTCAGCATCTGACCAGTCACCGTCAAGTTCCAGTGAAGATGC 1487
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1460 GACAAGTAGGAATTCAGATTCAGCATCTGACCAGTCACCCTCAAGTTCTAGTGAAGATGC 1519
Query 1488 TCAGATGCGCACAGGCCGGATTGTGTTCAAACTATTTGGGAAAGAGCCAAATGAATTTCC 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 TCAGATGCGCACAGGCCGGATTGTGTTCAAACTATTTGGGAAAGAGCCAAATGAATTTCC 1579
Query 1548 TATTGTCTTGCGTGGACAGATTCTTGACTGGTTATCGCATAGTCCAACTGACATGGAGAG 1607
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580 TATTGTCTTACGAGGACAGATTCTTGACTGGTTATCGCATAGTCCAACTGACATGGAGAG 1639
Query 1608 CTACATTAGGCCTGGCTGTATCGTATTGACCATCTATCTTCGTCAAGCTGAAACTGCTTG 1667
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1640 CTACATAAGACCTGGCTGTATCGTATTGACCATCTATCTTCGTCAAGCTGAAACTGCTTG 1699
Query 1668 GGAAGAGCTCTCAGACGATCTGGGTTTTAGCTTAAGGAAGCTTCTAGATCTCTCTGATGA 1727
|||||| || |||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1700 GGAAGAACTTTCAGACGATCTGGGTTTTAGCTTAGGGAAGCTTCTAGATCTCTCCGATGA 1759
Query 1728 TCCCTTGTGGACAACTGGATGGATTTATGTTAGGGTGCAAAACCAACTTGCATTTGTATA 1787
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1760 TCCCTTGTGGACAACTGGATGGATTTATGTTAGGGTGCAGAACCAACTTGCATTTGTATA 1819
Query 1788 TAACGGTCAGGTTGTTGTTGACACTTCATTGCCTATAAAAAGTCGTGATTATAGCCACAT 1847
||||||||||||||| ||||||||||||||| || ||||||||||||||||||| |||||
Sbjct 1820 TAACGGTCAGGTTGTCGTTGACACTTCATTGTCTCTAAAAAGTCGTGATTATAGTCACAT 1879
Query 1848 CATTAACGTTAAACCGCTTGCTATAGCTGCAACGGGGAAGGCTCAATTTACAGTTAAAGG 1907
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1880 CATTAGCGTTAAACCGCTTGCTATAGCTGCAACGGAGAAGGCTCAATTTACAGTTAAAGG 1939
Query 1908 CATTAATCTCCGTCGA-CGTGGCACAAGGTTGCTTTGTGCTGTTGAAGGAAAATACTTGA 1966
||| |||||||||| | |||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1940 CATGAATCTCCGTC-AGCGTGGCACAAGGTTACTTTGTTCTGTTGAAGGAAAATACTTGA 1998
Query 1967 TTCAGGAAACAACACACGACTCGACGACCGGGGAGAATGATGATCTCAAGGAGAATAATG 2026
||||||||||||||||||| ||||||||| ||||| |||| ||| ||||||| || | ||
Sbjct 1999 TTCAGGAAACAACACACGATTCGACGACCAGGGAGGATGACGATTTCAAGGACAACAGTG 2058
Query 2027 AGATTGTTGAGTGTGTAAACTTTTCTTGTGATATGCCTATAACGAGTGGTCGAGGATAT- 2085
|||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
Sbjct 2059 AGATTGTTGAGTGTGTAAACTTCTCTTGTGATATGCCTATATTGAGTGGTCGAGGAT-TC 2117
Query 2086 ATGGAGATTGAAGACCAAGGACTCAGCAGCAGCTTCTTCCCTTTCTTAGTTGTTGAAGAT 2145
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 2118 ATGGAGATTGAAGACCAAGGACTCAGTAGCAGCTTCTTCCCTTTCTTAGTGGTTGAAGAT 2177
Query 2146 GATGATGTTTGTTCTGAAATCCGTATACTTGAAACCACATTAGAGTTCACTGGAACTGAT 2205
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2178 GACGATGTTTGTTCTGAAATCCGTATACTTGAAACCACATTAGAGTTCACTGGAACTGAT 2237
Query 2206 TCTGCTAAGCAAGCTATGGATTTCATTCATGAAATCGGTTGGCTTCTTCACAGAAGTAAG 2265
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2238 TCTGCTAAGCAAGCTATGGATTTCATACATGAAATCGGTTGGCTTCTTCACAGAAGTAAA 2297
Query 2266 CTTGGGGAATCAGACCCAAATCCAGACGTTTTCCCATTAATACGCTTCCAGTGGCTAATC 2325
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2298 CTTGGGGAATCAGACCCAAATCCAGGCGTTTTCCCATTAATACGCTTCCAGTGGCTAATC 2357
Query 2326 GAGTTCTCAATGGATCGAGAGTGGTGCGCTGTGATCAGAAAGCTATTAAACATGTTCTTT 2385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2358 GAGTTCTCAATGGATCGAGAGTGGTGCGCTGTGATCAGAAAGCTATTAAACATGTTCTTT 2417
Query 2386 GATGGAGCTGTTGGTGAATTTTCTTCCTCCTCTAATGCCACACTATCAGAACTGTGCCTT 2445
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2418 GATGGAGCTGTTGGTGAATTTTCTTCCTCCTCTAATGCCACACTGTCAGAACTGTGCCTT 2477
Query 2446 CTTCACAGAGCCGTGAGGAAAAACTCTAAGCCTATGGTCGAAATGCTCTTGAGATATGTT 2505
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 2478 CTTCACAGAGCCGTGAGGAAAAACTCTAAGCCTATGGTTGAAATGCTCTTGAGATATATT 2537
Query 2506 CCCAAGCAACAAAGAAACAGCTTGTTTAGACCCGATGCTGCTGGTCCAGCCGGCTTAACA 2565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2538 CCCAAGCAACAAAGAAACAGCTTGTTTAGACCCGATGCTGCTGGTCCAGCCGGCTTAACA 2597
Query 2566 CCTCTTCATATTGCAGCCGGTAAAGACGGTTCAGAAGATGTGTTGGATGCGCTAACAGAA 2625
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2598 CCTCTTCATATTGCAGCTGGTAAAGACGGTTCAGAAGATGTGTTGGATGCGCTAACAGAA 2657
Query 2626 GATCCTGCAATGGTGGGGATTGAAGCGTGGAAGACATCTCGAGACAGCACAGGCTTCACA 2685
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2658 GATCCTGCAATGGTGGGGATTGAAGCGTGGAAGACATGTCGAGACAGCACAGGCTTCACA 2717
Query 2686 CCAGAAGACTACGCACGCTTACGCGGTCACTTCTCATACATCCACTTGATTCAACGCAAG 2745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2718 CCAGAAGACTACGCACGCTTACGCGGTCACTTCTCATACATCCACTTGATTCAACGCAAG 2777
Query 2746 ATCAATAAAAAGTCAACAACTGAAGATCATGTTGTGGTCAACATCCCAGTTTCTTTCTCA 2805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2778 ATCAATAAAAAGTCAACAACTGAAGATCATGTTGTGGTCAACATCCCAGTTTCTTTCTCA 2837
Query 2806 GACAGAGAGCAGAAAGAACCAAAATCAGGTCCGATGGCTTCAGCCTTGGAGATTAAC-CA 2864
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 2838 GACAGAGAGCAGAAAGAACCAAAATCAGGTCCGATGGCTTCAGCCTTGGAGA-TCACACA 2896
Query 2865 GCTTCCATGCAAGCTCTGTGACCATAAACTGGTGTATGGGACAACACGCAGGTCTGTAGC 2924
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2897 GATTCCATGCAAGCTCTGTGACCATAAACTGGTGTATGGGACAACACGCAGGTCTGTAGC 2956
Query 2925 GTACAGACCAGCTATGTTGTCAATGGTGGCGATTGCTGCGGTTTGCGTCTGTGTGGCACT 2984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2957 GTACAGACCAGCTATGTTGTCAATGGTGGCGATTGCTGCGGTTTGCGTCTGTGTGGCACT 3016
Query 2985 TCTGTTTAAGAGTTGCCCGGAAGTGCTCTATGTGTTTCAACCGTTCAGGTGGGAGTTATT 3044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3017 TCTGTTTAAGAGTTGCCCGGAAGTGCTCTATGTGTTTCAACCGTTCAGGTGGGAGTTATT 3076
Query 3045 GGACTATGGAACAAGCTGAGTGTAAGTCTACTTTGAAAGATCTTCTAAGATATATAT--G 3102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3077 GGACTATGGAACAAGCTGAGTGTAAGTCTACTTTGAAAGATCTTCTAAGATATATATATG 3136
Query 3103 AATGTTACTTATATAAAACCCATAGAGGTGTGATTTCTATATGTAACTATATGAGTATAA 3162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3137 AATGTTACTTATATAAAACCCATAGAGGTGTGATTTCTATATGTAACTATATGAGTATAA 3196
Query 3163 GATATAGAGACATGTTGGAGTTAGAAGAttgttgtt------gttgttgt-gt------- 3208
|||||||||||||||||||| |||||||||||||| |||||||| ||
Sbjct 3197 GATATAGAGACATGTTGGAGA-AGAAGATTGTTGTTATTATTGTTGTTGTTGTTGTTGTG 3255
Query 3209 -AAAAGCCT-TCCCTTTCTCTCTGGA------G-ATG-T-TGA-TGATTAGTATATTTTT 3256
|||||||| ||| | ||||||| || | || | | ||||||||||||||||
Sbjct 3256 TAAAAGCCTCTCC-TATCTCTCTCGAACCTAAGGATTCTCTCTCTGATTAGTATATTTTT 3314
Query 3257 TGTTTGACAGAATAATTTGTTTCTTAT-T-GTAATTTAACAATGGAGATGTTCTT 3309
||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||
Sbjct 3315 TGTTTGACAGAATAATTTGTTACTTATATTGTAATTTAACAATGGAGTTGTTCTT 3369
Score = 207 bits (112), Expect = 4e-52
Identities = 132/141 (94%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 1 TCTAtctctctctctcactctttgtctctcCCCTAACCtttttttGTACTAGCATAAGCA 60
||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||
Sbjct 29 TCTCTCTCTCTCTCTCACTCTTTGTCTCTCCCCTAACCTTTATT-GTACTAGCATAACCA 87
Query 61 TTACCATACATACTCTTCTCCACCACGCCACAAACGCAGATTCA-CATCTTCTTCTTCTT 119
|||||||||||||||||||| | ||||||||||||||||||||| || | ||||||||||
Sbjct 88 TTACCATACATACTCTTCTCTATCACGCCACAAACGCAGATTCATCA-CATCTTCTTCTT 146
Query 120 GTTCATAGCATCTCCATCACT 140
|||||||||||||||||||||
Sbjct 147 GTTCATAGCATCTCCATCACT 167
> AT3G60030.1 | Symbols: SPL12 | squamosa promoter-binding protein-like
12 | chr3:22165654-22169572 REVERSE LENGTH=3148
Length=3148
Score = 1487 bits (805), Expect = 0.0
Identities = 1955/2478 (79%), Gaps = 208/2478 (8%)
Strand=Plus/Plus
Query 726 TTGTCAGGTGGAAAACTGTGAAGCTGATCTT-AGTAAAGTTAAGGATTATCATAGACGTC 784
||||||||| || ||||||| ||||||| || || |||||||||||||||||||||||||
Sbjct 540 TTGTCAGGTAGACAACTGTGGAGCTGAT-TTAAGCAAAGTTAAGGATTATCATAGACGTC 598
Query 785 ATAAGGTCTGTGAGATGCATTCCAAGGCTACTAGTGC-CATTGTCGGAGGTATCT-TGCA 842
|||||||||||||||| ||||| || ||||||| ||| | |||| ||||| || | ||||
Sbjct 599 ATAAGGTCTGTGAGATTCATTCTAAAGCTACTACTGCAC-TTGTTGGAGGAAT-TATGCA 656
Query 843 GCGCTTTTGTCAGCAATGTAGTAGGTTCCATCTTCTTCAGGAGTTTGATGAAGGAAAGAG 902
||| ||||||||||||||||||||||| ||| | ||| | ||||||||||| ||||||||
Sbjct 657 GCGGTTTTGTCAGCAATGTAGTAGGTTTCATGTGCTTGAAGAGTTTGATGAGGGAAAGAG 716
Query 903 AAGTTGTCGTAGACGTTTGGCTGGGCATAATAAACGTAGGAGGAAAA-CAAATCCTGA-A 960
|||||| |||||||||||||||||||||||||| ||||| || |||| |||||||||| |
Sbjct 717 AAGTTGCCGTAGACGTTTGGCTGGGCATAATAAGCGTAGAAG-AAAAGCAAATCCTGATA 775
Query 961 CC-TGGCGCTAACGGGAATCCTA-G--TGATGATCAGTCAAGCAACTATCTCTTGATTAG 1016
| | | || || |||| | ||| | ||||||||| ||||||| ||| | |||||||
Sbjct 776 CTATAG-GC-AATGGGACTTCTATGAGTGATGATCAAACAAGCAATTATATGTTGATTAC 833
Query 1017 TCTCTTGAAGATACTCTCCAATATGCAT---AACCA-T---A-C---CGG-TGATCAAGA 1064
|||||||||||||||||||||||| ||| || || | | | ||| |||||| ||
Sbjct 834 TCTCTTGAAGATACTCTCCAATATTCATTCGAATCAGTCGGATCAAACGGGTGATCAGGA 893
Query 1065 TTTGA-TGTCTCATCTTCTGAAGAGCCTCGTAAGCCATGCTGGTGAACAGT-TAGGGAAA 1122
| | | ||||||||||||| |||||||| |||||||| ||||||||||| | ||||||
Sbjct 894 TCT-ACTGTCTCATCTTCTAAAGAGCCTTGTAAGCCAAGCTGGTGAACA-TATAGGGAGG 951
Query 1123 AACTTAGTTGAACTTCTTC----TACAAGGAGGATCTCAAGG-TTCCTTAAA-TATTGGA 1176
|| ||||||| ||||| | | | |||||| ||| ||| ||| | ||| |||||||
Sbjct 952 AATTTAGTTGGGCTTCTACAGGGTGGA-GGAGGA-CTCCAGGCTTC-TCAAAATATTGGA 1008
Query 1177 AACT---CGGCTTTGCT-TGGAATTGAGCAAGCTCCTCAAGAGGATTTAAAGCAACTTTC 1232
|||| | |||||||| | | | |||||||| |||| ||||||| |||| || | |||
Sbjct 1009 AACTTATCCGCTTTGCTCTC-ACTCGAGCAAGCCCCTCGAGAGGATATAAAACATCATTC 1067
Query 1233 -G-GT---AAACGTACCTCGGCAAGATGGG-A--C-A---G--CT-ACC-GAGA----CC 1272
| || ||||| ||| ||||||| | | | | | | || | |||| ||
Sbjct 1068 AGTGTCTGAAACG--CCTTGGCAAGAAGTGTATGCCAATAGTGCTCAAGAGAGAGTTGCC 1125
Query 1273 A-G-AT----CAGAAAAACAAGTCAAAATGAATGATTTTGATTTGAATGATATTTATATA 1326
| || | || |||||||||||| |||||||||||||||||||||| || || |||
Sbjct 1126 CCGGATAGGTCCGAGAAACAAGTCAAAGTGAATGATTTTGATTTGAATGACATCTACATA 1185
Query 1327 GACTCAGATGA--C-ACAGATATCGAAAGATC-TC-C-TCCTCCAACCAATCCAGCAACC 1380
||||||||||| | |||||||| || ||||| || | |||||| || |||||||| ||
Sbjct 1186 GACTCAGATGATACCACAGATATAGAGAGATCATCACCTCCTCCGACAAATCCAGCTACT 1245
Query 1381 AGTTCTCTTGATTATCCTTCATGGA-TA-CATCAGTCTAGTCCACCTCAGACAAGTAGGA 1438
|||||||||||||||| | || | | | | |||||||||||||||||| || |||||||
Sbjct 1246 AGTTCTCTTGATTATCAT-CAAG-ACTCGCGTCAGTCTAGTCCACCTCAAACTAGTAGGA 1303
Query 1439 --A-TTCAGATTCAGCATCTGACCAGTCACCGTCAAGTTCCAGTGAAGATGCTCAGATGC 1495
| |||||||||||| |||||||| ||||| ||||||||||||| |||||| |||| ||
Sbjct 1304 GGAATTCAGATTCAGCTTCTGACCAATCACCTTCAAGTTCCAGTGGAGATGCACAGA-GC 1362
Query 1496 -GCACAGGCCGGATTGTGTTCAAACTATTTGGGAAAGAGCCAAATGAATTTCCTA-TTGT 1553
| || | ||||||||||||||||| |||||||||||||| ||||| ||||| | |||
Sbjct 1363 CGTACTGATCGGATTGTGTTCAAACTCTTTGGGAAAGAGCCGAATGATTTTCC-AGTTGC 1421
Query 1554 CTTGCGTGGACAGATTCTTGACTGGTTATCGCATAGTCCAACTGACATGGAGAGCTACAT 1613
||| || |||||||||||| |||||||| |||||| ||||||||| ||||||||||||||
Sbjct 1422 CTTACGAGGACAGATTCTTAACTGGTTAGCGCATACTCCAACTGATATGGAGAGCTACAT 1481
Query 1614 TAGGCCTGGCTGTATCGTATTGACCATCTATCTTCGTCAAGCTGAAACTGCTTGGGAAGA 1673
||| ||||| |||||||| |||||||| ||||||||||||| |||| || ||||||||||
Sbjct 1482 TAGACCTGGTTGTATCGTTTTGACCATTTATCTTCGTCAAGATGAAGCTTCTTGGGAAGA 1541
Query 1674 GCTCTCA-GACGATCTGGGTTTTAGCTTAAGGAAGCTTCTAGATCTCTCTGATGATCCCT 1732
|| | | |||||| |||| ||||| |||| |||||||||||| || |||||||| |
Sbjct 1542 ACTTTGTTGT-GATCTGAGTTTCAGCTTGAGGAGGCTTCTAGATCTTTCAGATGATCCTT 1600
Query 1733 TGTGGACA-ACTGGATGGATTTATGTTAGGGTGCAAAACCAACTTGCATTTGTATATAAC 1791
| ||||| | ||| ||| ||||| ||||||||||||||||||| ||||||| | |||
Sbjct 1601 TATGGACTGA-TGGGTGGCTTTATCTTAGGGTGCAAAACCAACTCGCATTTGCGTTTAAT 1659
Query 1792 GGTCAGGTTGTTGTTGACACTTCATTGCCTATAAAAAGTCGTGATTATAGCCACATCATT 1851
|||||||||||| ||||||| || || ||| | | ||| | |||||||||||| ||||||
Sbjct 1660 GGTCAGGTTGTTCTTGACACATCTTTACCTCTGAGAAGCCATGATTATAGCCAAATCATT 1719
Query 1852 AAC-GTTAAACCGCTTGCTATAGCTGCAACGGGGAAGGCTCAATTTACAGTTAAAGGCAT 1910
| | |||| ||| |||||| || | || | ||| ||||||||||||| ||||||||
Sbjct 1720 A-CTGTTAGACCACTTGCTGTAACA--AA-GA--AAG-CTCAATTTACAGTAAAAGGCAT 1772
Query 1911 TAATCTCCGTCGACGTGGCACAAGGTTGCTTTGTGCTGTTGAAGGAAAATACTTGATTCA 1970
||||||||||||| |||||||||||| |||||| |||||||||||| | ||||| ||||
Sbjct 1773 CAATCTCCGTCGACCTGGCACAAGGTTACTTTGTACTGTTGAAGGAACACACTTGGTTCA 1832
Query 1971 GGAAACAACACACG-ACTCGACG-ACCGGGGAGAATGATGATCTCAAGGAGAATAATGAG 2028
|||| ||||||| | | || | | || |||| |||||||| |||||||||||||||
Sbjct 1833 GGAAGCAACACAAGGAGG-GATGGA--GGAGAGA--GATGATCTAAAGGAGAATAATGAG 1887
Query 2029 ATTG-TTGAGTGTGTAAACTTTTCTTGTGATATGCCTATAACGAGTGGTCGAGGATAT-A 2086
|||| || | ||| || ||||| ||||| |||||||| | ||||||||||| | | |
Sbjct 1888 ATTGATT---T-TGTCAATTTTTCCTGTGAGATGCCTATTGCAAGTGGTCGAGGTT-TCA 1942
Query 2087 TGGAGATTGAAGACCAAGGA---CTCAGCAGCAGCTTCTTCCCTTTCTTAGT-TGTTGAA 2142
|||| |||||||||||||| || ||||| || |||||||||||| |||| | | |||
Sbjct 1943 TGGAAATTGAAGACCAAGGTGGGCTAAGCAGTAGTTTCTTCCCTTTCATAGTATCT-GAA 2001
Query 2143 GATGATGATGTTTGTTCTGAAATCCGTATACTTGAAACCACATTAGAGTTCACTGGAACT 2202
|| || ||| |||||||||||||||| | ||| |||| |||||||||||| |||||||||
Sbjct 2002 GACGAAGATATTTGTTCTGAAATCCGAAGACTCGAAAGCACATTAGAGTTTACTGGAACT 2061
Query 2203 GATTCTGCTAA-GCAAGCTATGGATTTCATTCATGAAATCGGTTGGCTTCTTCACAGAAG 2261
|||||||| || |||||| ||||||||||| || ||||||||||||||||| ||||||||
Sbjct 2062 GATTCTGC-AATGCAAGCAATGGATTTCATCCACGAAATCGGTTGGCTTCTACACAGAAG 2120
Query 2262 T-AA-----G-C-----TTGGGGAATCAGACCCA-AATCCAGACG-T-T-TTCCCATTAA 2305
| || | | ||| | |||||| | | |||||||| | | | || | ||||
Sbjct 2121 TGAACTCAAGTCAAGACTTGCAGCATCAGATC-ATAATCCAGAGGATCTGTTTTCTTTAA 2179
Query 2306 TACGCTTCCAGTGGCTAATCGAGTTCTCAATGGATCGAGAGTGGTGC-GCTGTGATCA-G 2363
|||| || ||| ||||| |||||||||||||| || || |||||| | |||||| | |
Sbjct 2180 TACGGTTTAAGTTTCTAATAGAGTTCTCAATGGACCGGGAATGGTGCTG-TGTGATGAAG 2238
Query 2364 AAAGCTATTAAACATGTTCT-TT-GATGGAG-CTGTTGGTGAATTTTCTTCCTCCTCTAA 2420
|| | |||| || || | || || || | || | | | ||| | | || |||| |
Sbjct 2239 AA-GTTATTGAATAT-T-CTATTCGAAGAAGGCACT-GTTGA-TC--CATC-TCCTG-A- 2288
Query 2421 TGCCACACTATCAGAACTGTGCCTTCTTCACAGAGCCGTGAGGAAAAACTCTAAGCCTAT 2480
||| | ||||||||||||| |||||||||||||||||||||||||| || || || ||
Sbjct 2289 TGCTGCGTTATCAGAACTGTGTCTTCTTCACAGAGCCGTGAGGAAAAATTCAAAACCCAT 2348
Query 2481 GGTCGAAATGCT-CTTGAGAT--ATGTTCCCAAGCA-AC-AA--AGAAAC-AGC---TT- 2528
||| || ||||| ||| |||| | || |||||| | | || ||| | ||| ||
Sbjct 2349 GGTTGAGATGCTTCTT-AGATTCA-GT-CCCAAGAAGAAGAATCAGACATTAGCCGGTTT 2405
Query 2529 GTTTAGACCCGATGCTGCTGGTCCAGCCGGCTTAACACCTCTTCATATTGCAGCCGGTAA 2588
||||||||||||||| |||||||||| ||| |||||||| ||||| |||||||| |||||
Sbjct 2406 GTTTAGACCCGATGCAGCTGGTCCAGGCGGTTTAACACCGCTTCACATTGCAGCTGGTAA 2465
Query 2589 AGACGGTTCAGAAGATGTGTTGGATGCGCTAACAGAAGATCCTGCAATGG-TGGGGATTG 2647
||||||||||||||||||||||||||| || || || ||||||| |||| ||| |||
Sbjct 2466 AGACGGTTCAGAAGATGTGTTGGATGCCCTGACTGAGGATCCTGGAATGACTGGT-ATTC 2524
Query 2648 AAGCGTGGAAGACAT-CTCGAGACAGCACAGGCTTCACACCAGAAGACTACGCACGCTTA 2706
|||| ||||| | || | || |||| || || ||||||||||||||||| ||||| |||
Sbjct 2525 AAGCCTGGAAAA-ATTCCCGGGACAATACCGGATTCACACCAGAAGACTATGCACGTTTA 2583
Query 2707 CGCGGTCACTTCTCATACATCCA-CTTGATTCAACGCAAGA-TCAATAA-AAAGTCAA-C 2762
|| ||||||||||| || || || || | | ||||| || | ||| | ||| ||| |
Sbjct 2584 CGAGGTCACTTCTCGTATATTCATCTGG-TGCAACGGAA-ACTCAGTCGGAAAC-CAATC 2640
Query 2763 AACTGAAGATCATGTTGTGGTCAACATCCCAGTTTCTTTCTCAGACAGAGAGCAGAAAGA 2822
| |||| || || ||||||||||| || | |||||| | ||| ||||| ||| |
Sbjct 2641 GCCA-AAGAACACGTGGTGGTCAACATTCCTGAGTCTTTC--A-ACATTGAGCACAAACA 2696
Query 2823 ACCAAA-ATCAGGTCCGATGG---CTTCA-GCCTTGGAGATTAAC-CAGCTT--CCA-TG 2873
| ||| | || ||| |||| ||||| || |||||||| ||| ||| | ||| ||
Sbjct 2697 AGAAAAGAGGAG-TCCAATGGATTCTTCAAGC-TTGGAGAT-AACACAGATAAACCAATG 2753
Query 2874 CAAGCTCTGTGACCATAAAC-TGGTGTATGGGACAAC--ACG-CAGGTCTGTAGCGTACA 2929
||||||||||| || |||| || ||| || ||||| || || |||||| || ||||
Sbjct 2754 TAAGCTCTGTGATCACAAACGTG-TGTTTGTCACAACGCACCACAAGTCTGTTGCCTACA 2812
Query 2930 GACCAGCTATG-TTGTCAATGGTGGCGATTGCTGCGGTTTGCGTCTGTGTGGCACTTCTG 2988
| ||||| ||| || || ||||| ||||| || ||||||||||| ||||| || ||| ||
Sbjct 2813 GGCCAGCAATGCTT-TCGATGGTAGCGATAGCAGCGGTTTGCGTTTGTGTCGCTCTTTTG 2871
Query 2989 TTTAAGAGTTGCCCGGAAGTGCTCTATGTGTTTCAACCGTTCAGGTGGGAGTTA-TTGGA 3047
|| |||||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||| |
Sbjct 2872 TTCAAGAGTTGCCCGGAAGTGCTATATGTCTTTCAGCCATTCAGGTGGGAATTACTTG-A 2930
Query 3048 CTATGGAACAAGCTGAGT 3065
||||||||||||| |||
Sbjct 2931 GTATGGAACAAGCT-AGT 2947
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 166253249102
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5