BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg483891
Length=2712
Score E
Sequences producing significant alignments: (Bits) Value
AT2G47160.2 | Symbols: BOR1 | HCO3- transporter family | chr2:1... 3615 0.0
AT3G62270.1 | Symbols: | HCO3- transporter family | chr3:23042... 2224 0.0
> AT2G47160.2 | Symbols: BOR1 | HCO3- transporter family | chr2:19357478-19361147
REVERSE LENGTH=2812
Length=2812
Score = 3615 bits (1957), Expect = 0.0
Identities = 2106/2176 (97%), Gaps = 17/2176 (1%)
Strand=Plus/Plus
Query 543 GATGGAGTTCTCACGGCTGTTCAAACCTTAGCATCTACAGCCATTTGCGGCATGATACAC 602
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 622 GATGGAGTTCTCACGGCTGTTCAAACCTTAGCATCTACAGCCATTTGCGGTATGATACAT 681
Query 603 TCCATTATCGGAGGTCAGCCACTGCTTATTCTCGGAGTTGCTGAGCCAACTGTGATTATG 662
|| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct 682 TCGATTATCGGAGGTCAGCCACTGCTTATTCTCGGTGTTGCAGAGCCTACTGTGATTATG 741
Query 663 TACACATTCATGTTTAACTTTGCAAAGGCCAGACCTGAATTGGGACGAGACCTCTTCTTG 722
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 742 TACACATTCATGTTTAACTTTGCAAAGGCCAGACCTGAATTGGGACGAGACCTGTTCTTG 801
Query 723 GCGTGGTCTGGATGGGTTTGTGTTTGGACTGCTTTGATGCTGTTTGTGTTGGCTATATGT 782
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 802 GCGTGGTCTGGATGGGTTTGTGTTTGGACTGCTTTGATGCTGTTTGTGTTGGCAATATGT 861
Query 783 GGAGCTTGTTCCATCATCAATAGGTTCACTCGAGTAGCTGGAGAATTGTTTGGACTGCTT 842
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 862 GGAGCTTGTTCTATCATCAATAGGTTTACTCGAGTAGCTGGAGAATTGTTTGGACTGCTT 921
Query 843 ATTGCTATGCTCTTCATGCAACAAGCCATCAAAGGGCTTGTCGATGAATTCCGCATTCCT 902
||||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||
Sbjct 922 ATTGCTATGCTTTTCATGCAGCAAGCCATCAAAGGGCTAGTTGATGAATTCCGCATTCCT 981
Query 903 GAACGAGAAAATCAGAAGCTGAAGGAGTTCTTACCTTCCTGGAGGTTTGCTAATGGGATG 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 982 GAACGAGAAAATCAGAAGCTGAAGGAGTTCTTACCTTCCTGGAGGTTTGCTAATGGGATG 1041
Query 963 TTTGCTCTGGTTCTCTCCTTTGGCCTTCTTCTAACTGGACTTAGAAGCAGAAAAGCCAGA 1022
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1042 TTTGCTCTGGTTCTCTCCTTTGGCCTTCTTCTGACTGGACTTAGAAGCAGAAAAGCCAGA 1101
Query 1023 TCATGGCGGTACGGAACTGGCTGGCTCAGAAGCTTAATAGCTGACTATGGTGTACCACTC 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 TCATGGCGGTACGGAACTGGCTGGCTCAGAAGCTTAATAGCTGACTATGGTGTACCACTC 1161
Query 1083 ATGGTGCTCGTGTGGACCGGTGTCTCCTACATTCCAGCAGGAGACGTTCCAAAAGGAATT 1142
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1162 ATGGTGCTCGTGTGGACCGGTGTCTCCTACATTCCAGCAGGAGATGTTCCAAAAGGAATT 1221
Query 1143 CCCCGGCGACTTTTTAGCCCAAATCCTTGGTCCCCTGGTGCTTATGGAAACTGGACCGTA 1202
|| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1222 CCTCGGCGACTTTTTAGCCCAAATCCTTGGTCTCCTGGTGCTTATGGGAACTGGACCGTA 1281
Query 1203 GTAAAGGAGATGCTTGATGTTCCAATCGTCTACATAATTGGAGCTTTCATTCCAGCATCA 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1282 GTAAAGGAGATGCTTGATGTTCCAATCGTCTACATAATTGGAGCTTTCATTCCAGCATCA 1341
Query 1263 ATGATTGCTGTGCTTTACTACTTCGACCATAGTGTTGCTTCACAGCTCGCGCAGCAGAAA 1322
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1342 ATGATTGCTGTGCTTTACTACTTCGACCATAGTGTAGCTTCACAGCTCGCGCAGCAGAAA 1401
Query 1323 GAATTCAATTTGAGAAAACCGTCTTCTTACCACTATGACTTGCTTCTTCTTGGGTTTCTG 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1402 GAATTCAATTTGAGAAAACCGTCTTCTTACCACTATGACTTGCTTCTTCTTGGGTTTCTG 1461
Query 1383 ACATTAATGTGTGGTCTACTTGGAGTCCCTCCATCAAATGGTGTCATTCCTCAATCTCCA 1442
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1462 ACATTAATGTGTGGTCTACTTGGAGTCCCTCCATCAAACGGTGTCATTCCTCAATCTCCA 1521
Query 1443 ATGCATACCAAGAGCTTAGCAACTCTTAAATATCAGTTGCTTCGTAACAGACTGGTCGCA 1502
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1522 ATGCATACCAAGAGCTTAGCAACTCTTAAATACCAGTTGCTTCGTAACAGACTGGTCGCA 1581
Query 1503 ACAGCACGAAGAAGTATCAAAACGAATGCGAGTTTGGGACAACTCTATGACAATATGCAA 1562
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1582 ACAGCACGAAGAAGTATCAAAACAAATGCGAGTTTGGGTCAACTCTATGACAATATGCAA 1641
Query 1563 GAAGCTTACAATCACATGCAGACACCATTAGTATACCAGCAACCCCAAGGTTTAAAAGAG 1622
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1642 GAAGCTTACCATCACATGCAGACACCATTAGTATACCAGCAACCCCAAGGTCTAAAAGAG 1701
Query 1623 CTCAAGGAATCGACAATCCAAGCTACTACATTCACCGGAAACCTCAATGCTCCAGTTGAT 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1702 CTCAAGGAATCGACAATCCAAGCTACTACATTCACCGGAAACCTCAATGCTCCAGTTGAT 1761
Query 1683 GAAACTCTGTTTGATATAGAGAAAGAAATTGATGATTTACTACCAGTTGAAGTCAAAGAA 1742
||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1762 GAAACTCTGTTCGACATAGAGAAAGAAATAGATGATTTACTACCAGTTGAAGTCAAAGAA 1821
Query 1743 CAACGGTTAAGCAACTTGCTTCAGTCTACAATGGTAGGAGGATGCGTTGCAGCTATGCCT 1802
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1822 CAACGGGTAAGCAACTTGCTTCAGTCTACAATGGTAGGAGGATGCGTTGCAGCTATGCCT 1881
Query 1803 ATCCTTAAAATGATCCCAACATCAGTCCTTTGGGGATATTTTGCCTTCATGGCCATCGAA 1862
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1882 ATCCTTAAAATGATCCCAACATCAGTCCTTTGGGGCTATTTTGCCTTCATGGCCATCGAA 1941
Query 1863 AGCTTACCCGGAAACCAATTCTGGGAAAGAATCTTACTTCTGTTCACCGCCCCAAGTCGC 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1942 AGCTTACCCGGAAACCAATTCTGGGAAAGAATCTTACTTCTGTTCACCGCCCCAAGTCGC 2001
Query 1923 CGCTTCAAGGTTCTTGAAGACTACCACGCAACATTCGTGGAAACCGTTCCATTCAAGACG 1982
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2002 CGCTTCAAGGTTCTTGAAGATTACCACGCGACATTCGTGGAAACCGTTCCATTCAAGACG 2061
Query 1983 ATTGCAATGTTCACTCTTTTCCAAACGACTTATCTCTTAATCTGCTTTGGCCTCACATGG 2042
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 2062 ATTGCAATGTTTACTCTTTTCCAAACGACTTATCTCTTGATCTGCTTTGGTCTCACATGG 2121
Query 2043 ATCCCAATCGCAGGAGTCATGTTCCCTTTAATGATCATGTTCTTAATCCCCGTACGACAA 2102
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2122 ATACCAATCGCAGGAGTCATGTTCCCTTTAATGATCATGTTCTTAATCCCCGTACGACAA 2181
Query 2103 TATCTCCTCCCTAGATTCTTCAAAGGAGCTCATCTTCAGGACTTGGACGCAGCAGAGTAT 2162
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2182 TATCTCCTCCCTAGATTCTTCAAAGGAGCTCATCTTCAGGACTTAGATGCAGCAGAGTAT 2241
Query 2163 GAAGAAGCTCCAGCTTTACCCTACAATCTCGCAGCGGAAACGGAGATTGGATCCACAACA 2222
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2242 GAAGAAGCTCCAGCTTTACCCTTCAATCTCGCAGCGGAAACGGAGATTGGATCCACAACA 2301
Query 2223 TCGTATCCGGGAGATTTGGAGATTCTTGATGAGGTTATTACCCGAAGCAGAGGAGAGTTT 2282
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2302 TCGTATCCGGGAGATTTGGAGATTCTTGATGAGGTTATGACCCGAAGCAGAGGAGAGTTT 2361
Query 2283 AGACACACGAGTAGTCCTAAGGTCACAAGTTCAAGTTCGACTCCAGTCAATAATCGGAGT 2342
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2362 AGACACACGAGTAGTCCTAAGGTGACAAGTTCAAGTTCGACTCCAGTCAATAATCGGAGT 2421
Query 2343 TTGTCACAAGTGTTTAGTCCAAGAGTGAGTGAAATCAGGTTGGGTCAGATGAGTCCTCGA 2402
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2422 TTGTCACAAGTGTTTAGTCCAAGAGTGAGTGGAATCAGGTTGGGTCAGATGAGTCCTCGA 2481
Query 2403 GTCGTCGGAAATAGTCCAAAGCCGGCGAGTCGTGGGAGGAGTCCCTTGAACCAGTCGTCA 2462
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2482 GTCGTCGGGAATAGTCCAAAGCCGGCGAGTTGTGGGAGGAGTCCCTTGAACCAGTCGTCA 2541
Query 2463 TCATCGAACTGAGATTATAT-T-CAGGAAGCTTAATAAAAGATACTAAAAATCTAATGAG 2520
|| ||||||||||||||| | ||||||||||||||||| | ||||| |||||||||
Sbjct 2542 TC---GAACTGAGATTATATATTCAGGAAGCTTAATAAAACA-ACTAA---TCTAATGAG 2594
Query 2521 GATGGATTAAGAATGTTTAATTAGTTAATTAATTTGATCTTTAGCTCTTAAGaaaaaaaa 2580
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 2595 GATGGATTAAGAATGTTTAATTAGTTAATTAATTTGATCTTTAGCTCTT--GAAAAAGAA 2652
Query 2581 aa-aGGCTTCTTGAATCTTTCTTTAGTTTATGTTTTGTGTGTTTAATCCC-TTT-GTGGT 2637
|| || |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct 2653 AAGAG-CTTCTTGAATCTCTCTTTAGTTTATGTTTTGTGTGTTTAATCCCCTTTCGTGGT 2711
Query 2638 GTTTGATCTTGAGTCTTATGTAAAATACTAAAATGTCC-TACTTATTTCATAATATATGT 2696
|||| ||||| |||||||||||||||||||||||||| | |||||||| | ||||||||
Sbjct 2712 GTTTCATCTTCAGTCTTATGTAAAATACTAAAATGTCTGT-CTTATTTCGTTATATATGT 2770
Query 2697 AAAATTCGTTAAATAT 2712
||||||||||||||||
Sbjct 2771 AAAATTCGTTAAATAT 2786
Score = 638 bits (345), Expect = 0.0
Identities = 427/464 (92%), Gaps = 15/464 (3%)
Strand=Plus/Plus
Query 84 CTCCCTCTCTTTCTTCATGTAAATTCTTTCCTT-TTTTACATGTATCGAGATTCGATCTT 142
||| || |||||||||||||||||| ||| || |||| |||||||||||||||||||||
Sbjct 95 CTCTCTTTCTTTCTTCATGTAAATTGTTT-GTTCTTTTCCATGTATCGAGATTCGATCTT 153
Query 143 CTTCTTCTTCTCACGAACCTCCTTATTGGGTTTCCCCTGCATTCTC-CTATTCTTCGCTA 201
|||||||||| |||||||||||||||| | |||| ||||||||||| |||||||||||||
Sbjct 154 CTTCTTCTTCACACGAACCTCCTTATT-GTTTTCTCCTGCATTCTCTCTATTCTTCGCTA 212
Query 202 AACCTTGAATAAAGACATGTTCTTCGACATGGTTTTTTCCGGTTTAAAGTAGTTCAG-A- 259
|||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |
Sbjct 213 AACCTTGAATAAAGACATGTTCTTTAACATGGGTTTTTCCGGTTTAAAGTAGTT--GTAT 270
Query 260 CTTCGTTTCCCCCTTAAACCGGGTTTGAGCTCAACCTTTTCTTAGAAGAACTCCAAGTGT 319
||| |||||||| ||||||||||||| ||||||| |||||||||||| |||||||| |||
Sbjct 271 CTTTGTTTCCCCTTTAAACCGGGTTTAAGCTCAATCTTTTCTTAGAACAACTCCAACTGT 330
Query 320 TTGACGAATTGACTGAGAGAAACAGAGCAAGTGAGTCATGGAAGAGACTTTTGTGCCGTT 379
||||||| ||||||||||| || | | | | ||||||||||||||||||||||||||||
Sbjct 331 TTGACGATTTGACTGAGAG-AA-A-A-C-A--GAGTCATGGAAGAGACTTTTGTGCCGTT 383
Query 380 TGAAGGAATCAAGAATGATCTTAAAGGAAGATTGATGTGCTATAAGCAAGATTGGACTGG 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 TGAAGGAATCAAGAATGATCTTAAAGGAAGATTGATGTGCTATAAGCAAGATTGGACTGG 443
Query 440 TGGATTCAAGGCTGGATTTAGGATTCTGGCTCCCACCACTTACATATTTTTCGCGTCTGC 499
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 444 TGGATTCAAAGCTGGATTTAGGATTCTGGCTCCCACCACTTACATATTTTTCGCTTCTGC 503
Query 500 GATTCCTGTCATCTCATTCGGTGAACAACTGGAAAGAAGCACCG 543
|||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 504 GATTCCTGTCATCTCATTTGGTGAACAACTCGAAAGAAGCACCG 547
> AT3G62270.1 | Symbols: | HCO3- transporter family | chr3:23042284-23046048
REVERSE LENGTH=2771
Length=2771
Score = 2224 bits (1204), Expect = 0.0
Identities = 1774/2046 (87%), Gaps = 51/2046 (2%)
Strand=Plus/Plus
Query 356 CATGGAAGAGACTTTTGTGCCGTTTGAAGGAATCAAGAATGATCTTAAAGGAAGATTGAT 415
|||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||
Sbjct 415 CATGGAAGAGACTTTTGTTCCGTTTGAAGGTATCAAGAATGATCTTAAAGGAAGGTTAAT 474
Query 416 GTGCTATAAGCAAGATTGGACTGGTGGATTCAAGGCTGGATTTAGGATTCTGGCTCCCAC 475
|||||| || ||||||||||| || ||| |||| ||||| ||||||||||||||||| ||
Sbjct 475 GTGCTACAAACAAGATTGGACCGGAGGAATCAAAGCTGGGTTTAGGATTCTGGCTCCTAC 534
Query 476 CACTTACATATTTTTCGCGTCTGCGATTCCTGTCATCTCATTCGGTGAACAACTGGAAAG 535
||| |||||||| |||||||||||||||||||| || |||||||| ||||| ||||| |
Sbjct 535 CACATACATATTCTTCGCGTCTGCGATTCCTGTTATTTCATTCGGCGAACAGTTGGAACG 594
Query 536 AAGCACCGATGGAGTTCTCACGGCTGTTCAAAC-CTTAGCATCTACAGCCATTTGCGGCA 594
|||||| ||||||||||| || |||||||| || | | || |||||||||||||| || |
Sbjct 595 AAGCACTGATGGAGTTCTTACCGCTGTTCAGACAC-TGGCCTCTACAGCCATTTGTGGAA 653
Query 595 TGATACACTCCATTATCGGAGGTCAGCCACTGCTTATTCTCGGAGTTGCTGAGCCAACTG 654
| || ||||| || |||||||| ||||| |||||||| ||||||||||| ||||||||||
Sbjct 654 TCATTCACTCGATCATCGGAGGCCAGCCTCTGCTTATACTCGGAGTTGCAGAGCCAACTG 713
Query 655 TGATTATGTACACATTCATGTTTAACTTTGC-AAAGGCCAGACCTGAATTGGGACG-AGA 712
| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| | |
Sbjct 714 TTATTATGTACACATTCATGTTTAACTTTGCTAAAGG-GAGACCTGAACTGGGACGCA-A 771
Query 713 CCTCTTCTTGGCGTGGTCTGGATGGGTTTGTGTTTGGACTGCTTTGATGCTGTTTGTGTT 772
| |||||||| |||||||||||||||||||| |||||| | ||||| |||||||||||
Sbjct 772 TTTATTCTTGGCTTGGTCTGGATGGGTTTGTGTCTGGACTTCGTTGATACTGTTTGTGTT 831
Query 773 GGCTATATGTGGAGCTTGTTCCA-TCATCAATAGGTTCACTC-GAGTAGCTGGAGAATTG 830
|||||||||||||||||||| || | ||||| || ||||| | |||||||||||||||||
Sbjct 832 GGCTATATGTGGAGCTTGTT-CATTTATCAACAGATTCAC-CAGAGTAGCTGGAGAATTG 889
Query 831 TTTGGACTGCTTATTGCTATGCTCTTCATGCAACAAGCCATCAAAGGGCTT-GTCGATGA 889
||||| || ||||| |||||||||||||||||||||||||||||| || || ||||||||
Sbjct 890 TTTGGCCTTCTTATAGCTATGCTCTTCATGCAACAAGCCATCAAA-GGATTAGTCGATGA 948
Query 890 ATTCCGCATTCCTGAACGAGA-A-AATCAGAAGC-TGAAGGAGTTCTTACCTTCCTGGAG 946
||| ||| ||||| ||||| | ||| ||| | || |||||| ||||||||||||||
Sbjct 949 ATTTCGCGCTCCTG--CGAGAGAGGATCTGAAACTTG-TGGAGTTTTTACCTTCCTGGAG 1005
Query 947 GTTTGCTAATGGGATGTTTGCTCTGGTTCTCTCCTTTGGCCTTCTTCTAACTGGACTTAG 1006
||||| ||||||||||||||| ||||||| |||||||| ||||| |||||| ||||||
Sbjct 1006 ATTTGCAAATGGGATGTTTGCTTTGGTTCTTTCCTTTGGTCTTCTGATAACTGCACTTAG 1065
Query 1007 AAGCAGAAAAGCCAGATCATGGCGGTACGGAACTGGCTGGCTCAGAAGCTTAATAGCTGA 1066
|||||||||||| ||||||||| | || ||||| |||||||| ||||| ||| |||||||
Sbjct 1066 AAGCAGAAAAGCAAGATCATGGAGATATGGAACAGGCTGGCTTAGAAGTTTAGTAGCTGA 1125
Query 1067 CTATGGTGTACCACTCATGGTGCTCGTGTGGACCGGTGTCTCCTACATTCCAGCAGGAGA 1126
||||||||| ||||||||||| || ||||||||||||||||||||||| ||| |||||||
Sbjct 1126 CTATGGTGTGCCACTCATGGTTCTGGTGTGGACCGGTGTCTCCTACATCCCAACAGGAGA 1185
Query 1127 CGTTCCAAAAGGAATTCCCCGGCGACTTTTTAGCCCAAATCCTTGGTCCCCTGGTGCTTA 1186
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1186 TGTTCCAAAAGGAATTCCTCGGCGACTTTTTAGCCCAAATCCTTGGTCCCCTGGTGCTTA 1245
Query 1187 TGGA-AACTGGACCGTAGTAAAGGAGATGCTTGATGTTCCAATCGTCTACATAATTGGAG 1245
| || || ||||| || ||||||||||||||| | |||||||| ||||||||||||||||
Sbjct 1246 T-GAGAATTGGACTGTTGTAAAGGAGATGCTTCAAGTTCCAATTGTCTACATAATTGGAG 1304
Query 1246 CTTTCATTCCAGCATCAATGATTGCTGTGCTTTACTACTTCGACCATAGTGTTGCTTCAC 1305
| |||||||||||| |||||||||| || |||||||||||||| |||||||| || ||||
Sbjct 1305 CATTCATTCCAGCAACAATGATTGCAGTTCTTTACTACTTCGATCATAGTGTAGCATCAC 1364
Query 1306 AGCTCGCGCAGCAGAAAGAATTCAATTTGAGAAAACCGTCTTCTTACCACTATGACT-TG 1364
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||
Sbjct 1365 AGCTTGCGCAGCAGAAAGAATTCAATTTGAGAAAACCATCTTCTTACCACTATGA-TCTG 1423
Query 1365 CTTCTTCTTGGGTTTCTGACATTAATGTGTGGTCTACTTGGAGTCCCTCCATCAAATGGT 1424
||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 1424 CTTCTTCTTGGATTTCTGACCTTAATGTGTGGTCTACTTGGAATTCCTCCATCAAATGGA 1483
Query 1425 GTCATTCCTCAATCTCCAATGCATACCAAGAGCTTAGCAACTCTTAAATATCAGTTGCTT 1484
||||| |||||||| ||||||||||| |||||||||||||| || ||||||||| |||||
Sbjct 1484 GTCATCCCTCAATCACCAATGCATACTAAGAGCTTAGCAACACTAAAATATCAGCTGCTT 1543
Query 1485 CGTAACAGACTGGTCGCAACAGCACG-AAGAAGTATCAAAAC-GAATGCGAGTTTGGGAC 1542
|| |||||||| || ||||| || || || ||| ||| || | |||||||||| | ||||
Sbjct 1544 CGGAACAGACTAGTTGCAACTGCTCGCAA-AAGCATC-AAGCAGAATGCGAGTCTAGGAC 1601
Query 1543 AACTCTAT-GACAATATGCAAGAAGCTTACAATCACATGCAGACACCATTAGTATACCAG 1601
| | ||| || || |||||||| | ||| ||||| |||||||| |||||||| |||||
Sbjct 1602 AGTTGTATGGA-AACATGCAAGATGTTTATAATCAAATGCAGACTCCATTAGTCTACCAA 1660
Query 1602 CAACCCCAAGGTTTAAAAGAGCTCAAG-GAATCGACAATCCAAGCTACTACATTCACCGG 1660
|| || || ||| | |||||||| ||| ||||| ||||||||||| || |||||||| ||
Sbjct 1661 CAGCCTCAGGGTCTGAAAGAGCT-AAGAGAATCAACAATCCAAGCAACAACATTCACAGG 1719
Query 1661 AAACCTCAATGCTCCAGTTGATGAAACTCTGTTTGATATAGAGAAAGAAATTGATGATTT 1720
||| ||| |||||||||||||||| |||||||||||||| |||||||| |||||||||||
Sbjct 1720 AAATCTCGATGCTCCAGTTGATGAGACTCTGTTTGATATCGAGAAAGAGATTGATGATTT 1779
Query 1721 ACTACCAGTTGAAGTCAAAGAACA-ACG-GTTAAGCAACTTGCTTC-AGTCTA-CAATGG 1776
| | ||| |||||||||||||||| | | | ||||||||||||||| || | | |||||
Sbjct 1780 ATTGCCAATTGAAGTCAAAGAACAGA-GAG-TAAGCAACTTGCTTCAAG-C-AGTAATGG 1835
Query 1777 TAGGAGGATGCGTTGCAGCTATGCCTATCCTTAAAATGATCCCAACATCAGTCCTTTGGG 1836
| ||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1836 TTGGAGGGTGTGTTGCAGCTATGCCTCTCCTTAAAATGATCCCTACATCAGTCCTTTGGG 1895
Query 1837 GATATTTTGCCTTCATGGCCATCGAAAGCTTACCCGGAAACCAATTCTGGGAAAGAATCT 1896
| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1896 GCTACTTTGCCTTCATGGCAATCGAAAGCTTACCCGGAAACCAATTCTGGGAAAGAATCT 1955
Query 1897 TACTTCTGTTCACCGCCCCAAGTCGCCGCTTCAAGGTTCTTGAAGACTA-CCACGCAACA 1955
||||||| ||||| || || ||||| || |||||||| |||||||| || |||||| |||
Sbjct 1956 TACTTCTCTTCACAGCTCCTAGTCGTCGATTCAAGGTCCTTGAAGA-TAACCACGCGACA 2014
Query 1956 TTCGTGGAAACCGTTCCATTCAAGACGATTGCAATGTTCACTCTTTTCCAAACGACTTAT 2015
||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||
Sbjct 2015 TTCGTGGAAACCGTTCCATTCAAAACGATCGCAATGTTCACAATTTTCCAAACAACTTAT 2074
Query 2016 CTCTTAATCT-GCTTTGGCCTCACATGGATCCCAATCGCAGGAGTCATGTTCCCTTTAAT 2074
||||||| || ||||||| ||||| ||||| |||||||| ||||| ||||||||| || |
Sbjct 2075 CTCTTAA-CTTGCTTTGGTCTCACGTGGATACCAATCGCTGGAGTTATGTTCCCTCTACT 2133
Query 2075 GATCATGTT-CTTAATCCCCGTACGACAATATCTCCTCCCTAGATTCTTCAAAGGAGCTC 2133
||||||||| || | | |||||| | |||||| ||||||| |||||||||||| | ||||
Sbjct 2134 GATCATGTTTCTGA-TACCCGTAAGGCAATATATCCTCCCAAGATTCTTCAAAAGTGCTC 2192
Query 2134 ATCTTCAGGACTTGGACGCAGCAGAGTATGAAGAAGCTCCAGCTTTACCCTACAATCTCG 2193
||||||||||||| |||||||||||||| |||||||| || |||||||| | | ||||||
Sbjct 2193 ATCTTCAGGACTTAGACGCAGCAGAGTACGAAGAAGCACCCGCTTTACCGTTCCATCTCG 2252
Query 2194 CAG--C-GGAAACGGAGATTGGATCCACAACATCGTATCCGGGAGATT-TGGAGATTCTT 2249
||| | |||| | ||||| ||||| || | |||||||| | |||| || ||||||||
Sbjct 2253 CAGTACCGGAAGCTGAGATGGGATCAACTGCTTCGTATCCATGTGATTCTG-AGATTCTT 2311
Query 2250 GATGAGGTTATTACCCGAAGCAGAGGAGAGTTTAGACACACGA-GTAGTCCTAAGGTCAC 2308
|||||| ||||||| ||||||||||||||||||||||||| | |||||||||| || ||
Sbjct 2312 GATGAGTTTATTACAAGAAGCAGAGGAGAGTTTAGACACAC-ATGTAGTCCTAAAGTTAC 2370
Query 2309 AAGTTCAAGTTCGACTCCAGTCAATAATCGGAGTTTGTCACAAGTGTTTAGTCCAAGAGT 2368
||||| | ||| || || || ||||||||| | | || |||||||||||||| |||||
Sbjct 2371 TAGTTCGACTTCAACACCGGTTTATAATCGGAATCTCTCTCAAGTGTTTAGTCCTAGAGT 2430
Query 2369 GAGTGA 2374
|| |||
Sbjct 2431 GATTGA 2436
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134698241955
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5