BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484032
Length=1414
Score E
Sequences producing significant alignments: (Bits) Value
AT2G01220.2 | Symbols: | Nucleotidylyl transferase superfamily... 2078 0.0
AT3G27610.2 | Symbols: | Nucleotidylyl transferase superfamily... 1258 0.0
AT1G80010.1 | Symbols: FRS8 | FAR1-related sequence 8 | chr1:30... 102 9e-21
> AT2G01220.2 | Symbols: | Nucleotidylyl transferase superfamily
protein | chr2:123276-126466 FORWARD LENGTH=1445
Length=1445
Score = 2078 bits (1125), Expect = 0.0
Identities = 1339/1438 (93%), Gaps = 31/1438 (2%)
Strand=Plus/Plus
Query 1 CGAGAGAAACAATGGGAGAGGCTGCGATCCGTACCATCGTCGAAGCCATTCACTCATCTC 60
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 15 CGAGAGAAACAATGGGAGACGCTGCGATCCGTACCGTCGTCGAAGCCATTCACTCATCTC 74
Query 61 CGACGCAGGCCGTCGTCTACCTTTCCGGCGGTGCCTCTCTGGCTTTAGGTTGGTTGATGT 120
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 75 CGACGCAGGCCGTCGTCTATCTTTGCGGCGGTGCCTCTCTGGCTTTAGGTTGGTTGATGT 134
Query 121 CGGTTCCTGGAGCTTCCAACACGCTTCTCGAAG-CCGTGGTTCCTTATTCCAGAGTTTCT 179
||||||||||||| || ||||||||||||| || |||||||||||||||| ||||| |||
Sbjct 135 CGGTTCCTGGAGCGTCGAACACGCTTCTCG-AGTCCGTGGTTCCTTATTCGAGAGTATCT 193
Query 180 ATGGTCCAATTACTCGGCAGGGTTCCGAGCCAACACTGTAGCCAAGCAATGGCCAAGGAG 239
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 194 ATGGTTCAATTACTCGGCAGGGTTCCGAGCCAACACTGTAGCCAAGCATTGGCCAAGGAG 253
Query 240 ATGGCCTTGTTAGCCTACAATCGGGCGCTTAAGCTCTCTAAACCAGGATATCCGGTTCTC 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 ATGGCCTTGTTAGCCTACAATCGGGCGCTTAAGCTCTCTAAACCAGGATATCCGGTTCTC 313
Query 300 GGTCTCGGTTTTACGGGATCATTGGCAACTTCTCGTCCTAAGCGTGGGGATCACAGGTTC 359
||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 314 GGTGTCGGGTTTACGGGATCATTGGTAACTTCTCGTCCTAAGCGTGGAGATCACAGGTTC 373
Query 360 TTTTTGTCTATGAGAGCATCCAACCGGATTTGGGAATCTTCAGTCACTCTAACTAAGAAC 419
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 374 TTTTTGTCTATGAGAGCATCCGACCGGATTTTGGAATCTTCAGTCACTCTAACTAAGAAC 433
Query 420 TTACGCAGCCGAGAAGAAGAAGATAAGGTGTCAAGTTGTGCACTGATCCAGGCTATGGCC 479
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 434 TTACGGAGCCGAGAAGAAGAAGATAAGGTGTCAAGCTGTGCACTGATCCAGGCTATGGCC 493
Query 480 AAAGCATGCCAAGTTTCTGGGACACTTGACTCTGGCTTGACCGAGTCTGAGGTGCCTTAT 539
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 494 AAGGCATGCCAAGTTTCTGGGACACTTGACTCTGGCTTGACCGAGTCTGAGGTGCCTTAT 553
Query 540 GAGTCTGAAACCCACTTTACTGAAGAACAAGAACTAGAGCAGCTTATAAATGGGCACTTG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 GAGTCTGAAACCCACTTTACTGAAGAACAAGAACTAGAGCAGCTTATAAATGGGCACTTG 613
Query 600 ACCTGTAAGATTTATCCATTTTCTGGGGAAGCACATGGGTCTGATGAAGATAGAAAGATT 659
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 614 TGCTGTAAGATTTATCCATTTTCTGGGGAAGCACACGGGTCTGATGAAGACAGAAAGATT 673
Query 660 ATACTTCCTGGCTCTTTTAACCCATTACATGAAGGTCATCTCAAGCTATTAGAAGTTGCT 719
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 674 ATACTACCTGGCTCTTTTAACCCATTACATGAAGGTCATCTCAAGCTGTTAGAAGTTGCT 733
Query 720 CTGAGGGTTTGTGGGGGCGGGTACCCATGTTTTGAAATATCCGCAATAAATGCCGACAAA 779
|||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 734 ATGAGTGTTTGTGGGGGCGGCTACCCATGTTTTGAAATATCCGCAATAAATGCCGACAAA 793
Query 780 CCACCGCTTTCAGTTGCACAGATTAAAGATCGTGTCAAGCAATTTGAAGCAGTTGGAAAG 839
||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 794 CCACCGCTTACAATTGCACAGATTAAAGATCGTGTCAAGCAATTTGAAGTAGTTGGAAAG 853
Query 840 ACAATTATAGTTTCAAATCAGCCATACTTCTACAAGAAAGCTGAACTCTTCCCAGGAAGC 899
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 854 ACGATAATAGTTTCAAATCAGCCATACTTCTACAAGAAAGCTGAACTCTTCCCAGGAAGC 913
Query 900 AGTTTTGTAATTGGCGCTGACACTGCAGCGAGGCTTGTCGATCTAAAGTACTATGAAGGA 959
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 914 AGTTTTGTAATTGGCGCTGACACTGCAGCGAGGCTTGTCAATCCAAAGTACTATGAAGGA 973
Query 960 AGC-TACAAAAGGATGTTGGAGATACTTGGTGATTGCAAACGGACAGGTTGCACTTTCCT 1018
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 AGCAT-CAAAAGGATGTTGGAGATACTTGGTGATTGCAAACGGACAGGTTGCACTTTCCT 1032
Query 1019 TGTTGGTGGCCGCAATGTAGATGGTGTATTTAAGGTTCTTGAAGATCTTGATATTCCGGA 1078
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 1033 TGTTGGTGGCCGCAATGTAGATGGTGTATTTAAGGTTCTTGAAGATGTTGATATTCCAGA 1092
Query 1079 GGAAATCATCGACATGTTTATCTCAATTCCAGCAGATAAATTCAGGATGGATATATCCTC 1138
|||||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||||
Sbjct 1093 GGAAATAATCGACATGTTTATTTCAATTCCAGCAGATATATTCCGGATGGATATATCCTC 1152
Query 1139 TACAGAGATAAGAAAAAACCAAGGGGGTATTACGAAGTAATGACCGT-TCAACCCGCATG 1197
|||||||||||||||||| ||||||||| |||||| ||||||| | ||||||||| ||
Sbjct 1153 TACAGAGATAAGAAAAAAACAAGGGGGTGGTACGAACTAATGACT-TCTCAACCCGCTTG 1211
Query 1198 AATGTCTTGGCTCGCAAGACAATTTCTTTAGTGCAGTTGCTTTTTGATATGATCTGTATT 1257
|| |||||||||||||||||||||| |||||||||||| ||||||||| |||| ||||||
Sbjct 1212 AAAGTCTTGGCTCGCAAGACAATTTATTTAGTGCAGTTACTTTTTGATTTGATATGTATT 1271
Query 1258 GTGGT-CAGGTCGTGTGGACATAATG-AATCCGGATCAATGGTATGAGCATTTGCACATG 1315
||| | || || ||| || ||| |||||||||||||||||||||||||||||||||
Sbjct 1272 GTGTTGCAT-TC-TGTTCTTATTATGGAATCCGGATCAATGGTATGAGCATTTGCACATG 1329
Query 1316 -CA--GA--GTTGCCTGGGAAGCGTT--A----AAAC-TTAAAAGTGTGCGAATGTTTGT 1363
|| || | || | | | | ||| | |||| || |||| |||||||| |||||
Sbjct 1330 ACATCGAAAGA-GCATTGCA-GAGTTGCATGGGAAACGTTTAAAGAGTGCGAATATTTGT 1387
Query 1364 GAATTGTGACAGAGAAGCCTTGTTAGATATTTA-GA--G----CTGATTAGAATCTGT 1414
||||||||||||||||||||||||| ||||||| || | |||||||||||||||
Sbjct 1388 GAATTGTGACAGAGAAGCCTTGTTAAATATTTATGAATGTGAGCTGATTAGAATCTGT 1445
> AT3G27610.2 | Symbols: | Nucleotidylyl transferase superfamily
protein | chr3:10225525-10228192 REVERSE LENGTH=1417
Length=1417
Score = 1258 bits (681), Expect = 0.0
Identities = 1021/1185 (86%), Gaps = 24/1185 (2%)
Strand=Plus/Plus
Query 1 CGAGAGAAACAATGG-GAGAGGCTGCGATCCGTACCATCGTCGAAGCCATTCACTCATCT 59
||||||||||||||| | ||| |||||||||| |||||||||||| | |||||||||||
Sbjct 30 CGAGAGAAACAATGGCG-GAGTCTGCGATCCGAACCATCGTCGAATCAATTCACTCATCG 88
Query 60 CCGACGCAGGCCGTCGTCTACCTTTCCGGCGGTGCCTCTCTGGCTTTAGGTTGGTTGATG 119
|||||||| |||||||| || || |||||||||||||||| | ||||||||||||| |||
Sbjct 89 CCGACGCAAGCCGTCGTGTATCTCTCCGGCGGTGCCTCTCAGTCTTTAGGTTGGTTAATG 148
Query 120 TCGGTTCCTGGAGCTTCCAACACGCTTCTCGAAGCCGTGGTTCCTTATTCCA-GAGTTTC 178
|| |||||||||||||| ||||| |||||||||||||||||||| ||||||| || | ||
Sbjct 149 TCAGTTCCTGGAGCTTCGAACACACTTCTCGAAGCCGTGGTTCCGTATTCCATGA-TCTC 207
Query 179 TATGGTCCAATTACTCGGCAGGGTTCCGAGCCAACACTGTAGCCAAGCAATGGCCAAGGA 238
|||||| |||||||||||||||||||||| |||||||||||||||| ||||||| || ||
Sbjct 208 TATGGTTCAATTACTCGGCAGGGTTCCGAACCAACACTGTAGCCAATCAATGGCGAATGA 267
Query 239 GATGGCCTTGTTAGCCTACAATCGGGCGCTTAAGCTCTCTAAACCAGGATATCCGGTTCT 298
||||| |||||||| || ||||| || |||||||| ||||| ||||||| | |||||||
Sbjct 268 AATGGCTTTGTTAGCTTATAATCGTGCTCTTAAGCTTTCTAAGCCAGGATGTGCGGTTCT 327
Query 299 CGGTCTCGGTTTTACGGGATCATTGGCAACTTCTCGTCCTAAGCGTGGGGATCACAGGTT 358
||| | |||||||| ||| | || |||||||||||||| |||||||||||||| |||||
Sbjct 328 TGGTGTTGGTTTTACTGGAACGTTAGCAACTTCTCGTCCAAAGCGTGGGGATCATAGGTT 387
Query 359 CTTTTTGTCTATGAGAGCATCCAACCGGATTTGGGAATCTTCAGTCACTCTAACTAA--G 416
||||||||| || ||||| ||||||||||| |||||| ||||||| |||||||| || |
Sbjct 388 CTTTTTGTCGATAAGAGCTTCCAACCGGATATGGGAAACTTCAGTTACTCTAACAAAGGG 447
Query 417 AACTTACGCAGCCGAGAAGAAGAAGATAAGGTGTCAAGTTGTGCACTGATCCAGGCTATG 476
|| ||| |||||||| ||||||||||| ||| |||| | || |||||| |||||||||
Sbjct 448 AA--AACGAAGCCGAGAGGAAGAAGATAAAGTGGCAAGCTCTGTACTGATTCAGGCTATG 505
Query 477 GCCAAAGCATGCCAAGTTTCTGGGACACTTGACTCTGGCTTGACCGAGTCTGAGGTGCCT 536
|| || |||||||||||||||| ||||||||||||||||||||| || ||||||||| ||
Sbjct 506 GCTAAGGCATGCCAAGTTTCTGAGACACTTGACTCTGGCTTGACTGATTCTGAGGTG-CT 564
Query 537 T-ATGAGTCTGAAACCCACTTTACTGAAGAACAAGAACTAGAGCAGCTTATAAATGGGC- 594
| ||||||||| || ||| |||| ||||||| |||||||||| ||||||||| |||| |
Sbjct 565 TAATGAGTCTGTAATCCAGTTTAGTGAAGAAGAAGAACTAGAACAGCTTATAGATGGACA 624
Query 595 ACT-TGACCTGTAAGATTTATCCATTTTCT---GGGGAAGCACATGGGTCTGATGAAGAT 650
| | || || |||||| |||||||||||| | ||| || | ||||| ||| |||||
Sbjct 625 AATATG--CTCTAAGATCTATCCATTTTCTAAAGCAGAATCATACGGGTCGGATAAAGAT 682
Query 651 AGAAAGATTATACTTCCTGGCTCTTTTAACCCATTACATGAAGGTCATCTCAAGCTATTA 710
|||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||| ||
Sbjct 683 AGAAAGATTATACTGCCTGGTTCTTTTAACCCATTACATGACGGTGATCTCAAGCTGTTG 742
Query 711 GAAGTTGCTCTGAGGGTTTGTG-GG--GGCGGGTACCCATGTTTTGAAATATCCGCAATA 767
|||| |||| |||| |||| || || || ||||| ||||||||||||||||| ||| |
Sbjct 743 GAAGCTGCTATGAGTGTTTCTGAGGAAGGAGGGTATCCATGTTTTGAAATATCTGCACTG 802
Query 768 AATGCCGACAAACCACCGCTTTCAGTTGCACAGATTAAAGATCGTGTCAAGCAATTTGAA 827
||||| ||||||||| ||||| ||||| || ||||||||||||||||||| |||||||||
Sbjct 803 AATGCAGACAAACCATCGCTTACAGTTACAGAGATTAAAGATCGTGTCAAACAATTTGAA 862
Query 828 GCAGTTGGAAAGACAATTATAGTTTCAAATCAGCCATACTTCTACAAGAAAGCTGAACTC 887
| | ||| |||||| | ||||||||||||||||| | ||||||||||||||||||||||
Sbjct 863 GTACTTGAAAAGACGGTAATAGTTTCAAATCAGCCTTTCTTCTACAAGAAAGCTGAACTC 922
Query 888 TTCCCAGGAAGCAGTTTTGTAATTGGCGCTGACACTGCAGCGAGGCTTGTCGATCTAAAG 947
|||||||||||||||||||||||||| ||||| |||||||| ||| |||| ||| ||||
Sbjct 923 TTCCCAGGAAGCAGTTTTGTAATTGGTGCTGATACTGCAGCAAGGATTGTTAATCCAAAG 982
Query 948 TACTATGAAGGAAGCTACAAAAGGATGTTGGAGATACTTGGTGATTGCAAACGGACAGGT 1007
||||||||||||||| ||||||||||||||||| |||| |||||||||||||| ||||||
Sbjct 983 TACTATGAAGGAAGCCACAAAAGGATGTTGGAGGTACTAGGTGATTGCAAACGAACAGGT 1042
Query 1008 TGCACTTTCCTTGTTGGTGGCCGCAATGTAGATGGTGTATTTAAGGTTCTTGAAGATCTT 1067
|||| ||||||||||||||||| ||||||||| ||||||| ||||||||||| |||| |
Sbjct 1043 TGCAAGTTCCTTGTTGGTGGCCGTAATGTAGATAGTGTATTCAAGGTTCTTGACGATCAT 1102
Query 1068 GATATTCCGGAGGAAATCA-TCGACA-TGTTTATCTCAATTCCAGCAGATAAATTCAGGA 1125
|| ||||| ||||||| | | ||| |||||| ||||||| ||||||||| |||| | |
Sbjct 1103 GAGATTCCAAAGGAAATAAGT--ACAATGTTTACCTCAATTTCAGCAGATACATTCCGTA 1160
Query 1126 TGGATATATCCTCTACAGAGATAAGAAAAAACCAAGGGGGTATTA 1170
|||||||||||||||||||| ||||||| |||||||| ||| |||
Sbjct 1161 TGGATATATCCTCTACAGAGCTAAGAAAGAACCAAGGAGGTGTTA 1205
> AT1G80010.1 | Symbols: FRS8 | FAR1-related sequence 8 | chr1:30097401-30099846
FORWARD LENGTH=2342
Length=2342
Score = 102 bits (55), Expect = 9e-21
Identities = 62/65 (95%), Gaps = 2/65 (3%)
Strand=Plus/Plus
Query 1256 TTGTGGTCAGGTCGTGTGGACATAATGAATCCGGATCAATGGTATGAGCATTTGCACATG 1315
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2167 TTG-GGTCAGGTCGTGTGGACATAATGAATCCGGATCAATGGTATGAGCATTTGCACA-G 2224
Query 1316 CAGAG 1320
||||
Sbjct 2225 AAGAG 2229
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69678356460
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5