BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484065
Length=1426
Score E
Sequences producing significant alignments: (Bits) Value
AT2G01470.1 | Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein |... 1978 0.0
AT5G50650.1 | Symbols: | Transducin/WD40 repeat-like superfami... 1127 0.0
AT5G50550.1 | Symbols: | Transducin/WD40 repeat-like superfami... 1127 0.0
> AT2G01470.1 | Symbols: STL2P, ATSEC12 | SEC12P-like 2 protein
| chr2:211970-214472 REVERSE LENGTH=1464
Length=1464
Score = 1978 bits (1071), Expect = 0.0
Identities = 1312/1423 (92%), Gaps = 37/1423 (3%)
Strand=Plus/Plus
Query 1 GGACTTCACATTGAGCTC--GAGAC--ACACGGAGGATGGCGAATCAGAGTACAGAGACG 56
|||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 2 GGACTTGGCATTGAGCTCGAGAGACAGACACGGAGGATGGCGAATCAGAGTACAGAGACG 61
Query 57 AATCAACCGTCGAATATGCAGACTTACGGTGTACCGATTTACGCCGTCGATTGGATTCCG 116
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 62 AATCAACCGTCGAATATGCAGACTTACGGTGTACCGATTTACGCCGCCGACTGGATTCCG 121
Query 117 GAGGTAGCTGTCAGATCGAAAATCATAATGGATCCGGATAAATCCGAAGATGATGATGAg 176
||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct 122 GAGGTAGATGTCAGATCCAAAATCATAATGGATCCGGAGAAATCTGAAGATGATGATGAG 181
Query 177 tcttcgtcgtcttcgtcgtcgtcgtcttcttcCCGGAGCTGCATCGTTTTGTCCGGCGGA 236
||||| ||||| | || | ||||||||||||||||||||||||||||||||||||
Sbjct 182 ---TCGTCTTCTTC-T--TC-T--TCTTCTTCCCGGAGCTGCATCGTTTTGTCCGGCGGA 232
Query 237 GGCGGAGAGGGAAGAAGCGGAATCCCTAATGTTATCTTAATCTGTCGTGTTGATCTAAAC 296
|||||||||||| |||| |||||| ||||||| || ||||| || |||||||||||||||
Sbjct 233 GGCGGAGAGGGACGAAGTGGAATCTCTAATGTCATATTAATATGCCGTGTTGATCTAAAC 292
Query 297 ACCAATTCTCTCTCGGAACAACCTTTGGGTAGGCTTGTGGTTGGCACTGATCTACCTTAT 356
|||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct 293 ACCAATTCTCTCTCGGAACAACCTCTGGGTAGGCTTGTGGTTGGCTCTGATCTGCCTTAT 352
Query 357 CGTATGGCTGTTCATCCTCGGGAAGGTGGTCTTATTTGCGCATTGCCTAACAGTTGCAGA 416
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 353 CGGATGGCTGTTCATCCTCGGGAAGGTGGTCTTATTTGCGCGTTGCCTAACAGTTGCAAA 412
Query 417 CTGTTTCATTGGGAAGACATTATGAGCCGAGAGGATAATCAGGCTGGTGAAGAGTCAGAG 476
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 413 CTGTTTCATTGGGAAGACATTATGAGCCGAGAGGATAATCAGGCTGGT---GAGTCGGAG 469
Query 477 AAAGTGATTAAAGAGTTAAAAGATGTTGGACAACAATTGGCTCTGGC-TTTCGATCAGGA 535
|||||||||||||||||| ||||||||||||||| ||||||||||| ||| ||| |||
Sbjct 470 GAAGTGATTAAAGAGTTAAGAGATGTTGGACAACAGTTGGCTCTGGCGTTT-AATCCGGA 528
Query 536 GGGGTCTGTTCTCGCCGCTGGTGCGGAGGATGGGACTTTGAGGGTTTTTGAATGGCCCAG 595
|||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 529 GGGGTCTGTTCTTGCTGCTGGTGCGGAGGATGGGACTTTGAGGGTTTTTAAATGGCCTAG 588
Query 596 CATGAAAACGTTACTTAATGAGTCTCAGGCTCATTCATCAGTTAAAAGCCTGACTTTCAG 655
|||||| || |||||||||||||| ||||||||||| ||||||||| |||| ||||||||
Sbjct 589 CATGAATACTTTACTTAATGAGTCCCAGGCTCATTCTTCAGTTAAATGCCTTACTTTCAG 648
Query 656 CGAAAGTGGTAAATTTCTTGTATCTCTTGACGGTCCAGTTTGTCGGGTTTGGGATGTGAA 715
|||||||||| |||||||||||||||||| ||||||||||||||| |||||||| |||||
Sbjct 649 CGAAAGTGGTCAATTTCTTGTATCTCTTGGCGGTCCAGTTTGTCGAGTTTGGGACGTGAA 708
Query 716 TGCTTCTGCTGCCGTTGCCAGTCTATCAAAAGAGAAGGACGAGATGTTTGCCTCCTGTAG 775
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 TGCTTCTGCTGCTGTTGCCAGTCTATCAAAAGAGAAGGACGAGATGTTTGCCTCCTGTAG 768
Query 776 ATTCTCTGTAGACAGTGCAGGCAATGAAGTTCTTTACATTGCTGCAAACACTGAACGTGG 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 ATTCTCTGTAGACAGTGCAGGCAATGAAGTTCTTTACATTGCTGCAAACACTGAACGTGG 828
Query 836 TGGGAGTATTATAACATATGATTCAAAATCATGGAAAAGAAAATGGTCGAAGCCTATAAA 895
||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||
Sbjct 829 TGGGAGTATTATAACATGTGATACAAAATTATGGAAAAGAAAATGGTCGAAGCCTATAAA 888
Query 896 AAAGAACTCTATATCAGCCTTTAATGTCTCAGCTGATGGAAAGCTTCTTGCAATAGGCAC 955
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 889 AAAGAACTCTATATCAGCTTTTAATGTCTCAGCTGATGGGAAGCTTCTTGCAATAGGAAC 948
Query 956 CCTTGAAGGAGATGTTTTAATACTTGAACCGACGAGAATGCAAACTATCCAAGTCGTCAA 1015
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 949 CCTTGAAGGAGATGTTTTAATACTTGAATCGACAAGAATGCAAACTATCCAAGTCGTCAA 1008
Query 1016 GAAAGCGCATCTCGGTTTGGTCACAGCGCTGACTTTCTCCCCTGATTCAAGGGGCTTAGT 1075
|||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||||
Sbjct 1009 GAAAGCGCATCTTGGTTTGGTCACAGCACTGACTTTCTCTCCTGATTCAAGGGGATTAGT 1068
Query 1076 GTCGGTATCTTTCGACTCAAGGGCAAGGCTGACCATGATTGAACAAAAGGGTGACAAACC 1135
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1069 GTCGGTATCTTTTGACTCAAGGGCAAGGCTGACCATGATTGAACAAAAGGGGGACAAACC 1128
Query 1136 TGGAATAAGGTGGTGGCTACTGATTTTATTGGTAGTGTTACTATACGTGGTTGCATATTA 1195
|||| ||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||
Sbjct 1129 TGGAGTAAGGTGGTGGCTACTGGTTTTATTGATAGTGTTGCTATACGTGGTTGCATACTA 1188
Query 1196 TTATATGAAGGCAAAGGGTGTCATACCTTAAAAAGGC----A-----CCAGA-AG-ACGA 1244
||||||||||||||||||| |||||||||| |||||| | ||| | || ||||
Sbjct 1189 TTATATGAAGGCAAAGGGTATCATACCTTAGAAAGGCCTTTAAGTGACCACACAGGACGA 1248
Query 1245 TACAGCGGAGTGGCTTTGTAACCGACATATTATACGCT--C--TTTGAGTTAGCTTTTTA 1300
||||||||| |||||| |||||| |||||| ||||| | | |||||||||||||||||
Sbjct 1249 TACAGCGGAATGGCTT-GTAACCAACATATCATACGATTACGCTTTGAGTTAGCTTTTTA 1307
Query 1301 CGTTTCACATCTACCAGAAACTTGCTTGCTTTTATATCAATAAAAAATGTAAACTAACAC 1360
|||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 1308 TGTTTGACATCTACCAGAAACTTGCTTGCTTT-ATATCAATAAAACATGTAAACTAACAC 1366
Query 1361 TTAAAACAGTAAAAATTACAATTTGTTTCC-Cttttttttttt 1402
| ||||||| |||| ||||||||||||||| ||||||||||||
Sbjct 1367 T-AAAACAGCAAAAGTTACAATTTGTTTCCTCTTTTTTTTTTT 1408
> AT5G50650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:20610212-20612255 FORWARD LENGTH=1346
Length=1346
Score = 1127 bits (610), Expect = 0.0
Identities = 1002/1181 (85%), Gaps = 67/1181 (6%)
Strand=Plus/Plus
Query 62 ACCGTCGAATATGCAGACTTACGGTGTACCGATTTACGCCGTCGATTGGATTCCGGAGGT 121
|||||||||| | ||||| ||||||||||| |||||||||||||| ||||||| ||||
Sbjct 21 ACCGTCGAATCTACAGACCTACGGTGTACCAATTTACGCCGTCGACTGGATTCTAGAGGA 80
Query 122 AGCTGTCAGATCGAAAATCA-TAATGGATCCGGATAAATCCGAAGATGATGATGAgtctt 180
|||||||||||| ||||||| ||| ||||| || || || ||||||||||| |
Sbjct 81 AGCTGTCAGATCCAAAATCACTAA-GGATCAGG----AT--GATGATGATGATGA----T 129
Query 181 cgtcgtcttcgtcgtcgtcgtcttcttcCCGGAGCTGCATCGTTTTGTCCGGCGGAGGCG 240
| | |||||||||||| | | | | ||||||||| ||||||||||| |
Sbjct 130 -G--G--ATCGTCGTCGTCG------T--C---G-TACATCGTTTTATCCGGCGGAGGAG 172
Query 241 GAGAGGGAAGAAGCGGAATCCCTAATGTTATCTTAATCTGTCGTGTTGATCTAAACACCA 300
|||| ||| |||| ||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct 173 GAGAAGGACGAAGTGGAATACCTAATGTCATCTTAATCTGTCGTGTTGATCTCCACACCA 232
Query 301 ATTCTCTCTCGGAACAACCT-TTGGGTAGGCTTGTGGTTGGCACTGATCTACCTTATCGT 359
|||||||||| ||||||||| || ||||||| |||| |||||||||||||||||||||||
Sbjct 233 ATTCTCTCTCTGAACAACCTATT-GGTAGGCGTGTGATTGGCACTGATCTACCTTATCGT 291
Query 360 ATGGCTGTTCATCCTCGGGAAGGTGGTCTTATTTGCGCATTGCCTAACAGTTGCAGACTG 419
|||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 292 ATGGCTATTCATCCTCGTCAAGGTGGTCTTATTTGTGCATTGCCTAACAGTTGCAGACTG 351
Query 420 TTTCATTGGGAAGACATTATGAGCCGAGAGGATAATCAGGCTGGTGAAGAGTCAGAGAAA 479
||| |||||||| ||||||| || | || |||||| | | |||||||||||||||
Sbjct 352 TTTGATTGGGAAAACATTAT-AG-AG-GATGATAAT---G--AG-GAAGAGTCAGAGAAA 402
Query 480 G-TGATTAAAGAGTTAAAAGATGTTGGACAACAATTGGCTCTGGC-TTTCGATCAGGAGG 537
| || |||||||||||||||||||||||||||| ||| |||| | ||| ||||||| |
Sbjct 403 GTTG-TTAAAGAGTTAAAAGATGTTGGACAACAGTTGTCTCTCTCGTTT-AATCAGGATG 460
Query 538 GGTCTGTTCTCGCCGCTGGTGCGGAGGATGGGACTTTGAGGGTTTTTGAATGGCCCAGCA 597
|| ||||||| || ||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 461 GGACTGTTCTAGCTACTGGTGCAGAGGATGGGACTTTGAGGGTTTTTGAATGGCCAAGCA 520
Query 598 TGAAAACGTTACTTAATGAGTCTCAGGCTCATTCATCAGTTAAAAGCCTGACTTTCAGCG 657
|||| || ||||||||||||||| || | ||| |||||||||||||||| ||||||||||
Sbjct 521 TGAAGACTTTACTTAATGAGTCTAAGACACATGCATCAGTTAAAAGCCTAACTTTCAGCG 580
Query 658 AAAGTGGTAAATTTCTTGTATCTCTT-GACGGTCCAGTTTGTCGGGTTTGGGATGTGAAT 716
|||||||||| ||||||||||||||| || | |||| |||||||||||||||||||||||
Sbjct 581 AAAGTGGTAAGTTTCTTGTATCTCTTGGA-GCTCCACTTTGTCGGGTTTGGGATGTGAAT 639
Query 717 GCTTCTGCTGCCGTTGCCAGTCTATCAAAAGAGAAGGACGAGATGTTTGCCTCCTGTAGA 776
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 640 GCTTCTGCTGCTATTGCCAGTCTATCAAAAGAGAAGGACGAGATGTTTGCCTCGTGTAGA 699
Query 777 TTCTCTGTAGACAGTGCAGGCAATGAAGTTCTTTACATTGCTGCAAACACTGAACGTGGT 836
||||||||||||| | |||||| |||||||||||| |||||||||||||| ||||||||
Sbjct 700 TTCTCTGTAGACAATTCAGGCAGTGAAGTTCTTTATGTTGCTGCAAACACTCAACGTGGT 759
Query 837 GGGAGTATTATAACATATGATTCAAAATCATGGAAAAGAA-AATGGTCGAAGCCTAT-AA 894
|||||||||||||||| ||| ||| |||||||| ||||| || | || |||| ||| ||
Sbjct 760 GGGAGTATTATAACATGGGATACAACATCATGGAGAAGAAGAA-GTTCAAAGCTTATTAA 818
Query 895 AA-AAG-AACTCTATATCAGCCTTTAATGTCTCAGCTGATGGAAAGCTTCTTGCAATAGG 952
|| || ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||
Sbjct 819 AAGAAACAACTCTATATCTGCCTTTAATGTCTCAGCTGATGGGAAGCTTCTTGCAGTAGG 878
Query 953 CACCCTTGAAGGAGATGTTTTAATACTTGAACCGACGA-GAATGCAAACTATCCAAGTCG 1011
||||| |||||||||||||||||| |||| |||| | || ||||||||| |||| |||
Sbjct 879 AACCCTCGAAGGAGATGTTTTAATAATTGATTCGACAAAGA-TGCAAACTAACCAAATCG 937
Query 1012 TCAAGAAAGCGCATCTCGGTTTGGTCACAGCGCTGACTTTCTCCCCTGATTCAAGGGGCT 1071
|||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||
Sbjct 938 TCAAGAAAGCTCATCTCGGTTTGGTCACCGCACTGACTTTCTCCCCTGATTCAAGGTGCT 997
Query 1072 TAGTGTCGGTATCTTTCGACTCAAGGGCAAGGCTGACCATGATTGAACAAAAGGGTGACA 1131
||||||| |||||||| ||||||||||||||||| ||| |||| ||||||||||||| |
Sbjct 998 TAGTGTCAGTATCTTTTGACTCAAGGGCAAGGCTAACCGTGATCAAACAAAAGGGTGAAA 1057
Query 1132 AACCTGGAATA-AG--GTGG-TGGCTACTGATT-TTATTGGTAGTGTTACTATACGTGGT 1186
||| | || || | |||| |||| | ||| || || | ||||| ||||||||||
Sbjct 1058 AACGTCGAGTATATCTGTGGGTGGCGGC--ATTGTTGTT--T-GTGTTGGTATACGTGGT 1112
Query 1187 TGCATATTATTAT-ATGAAGGCAAAGGGTG-TCATACCTTA 1225
| ||||||| | ||| ||||| ||| | |||||| |||
Sbjct 1113 TTTGTATTATT-TGATGGTGGCAATGGG-GATCATACATTA 1151
> AT5G50550.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:20576870-20578913 FORWARD LENGTH=1346
Length=1346
Score = 1127 bits (610), Expect = 0.0
Identities = 1002/1181 (85%), Gaps = 67/1181 (6%)
Strand=Plus/Plus
Query 62 ACCGTCGAATATGCAGACTTACGGTGTACCGATTTACGCCGTCGATTGGATTCCGGAGGT 121
|||||||||| | ||||| ||||||||||| |||||||||||||| ||||||| ||||
Sbjct 21 ACCGTCGAATCTACAGACCTACGGTGTACCAATTTACGCCGTCGACTGGATTCTAGAGGA 80
Query 122 AGCTGTCAGATCGAAAATCA-TAATGGATCCGGATAAATCCGAAGATGATGATGAgtctt 180
|||||||||||| ||||||| ||| ||||| || || || ||||||||||| |
Sbjct 81 AGCTGTCAGATCCAAAATCACTAA-GGATCAGG----AT--GATGATGATGATGA----T 129
Query 181 cgtcgtcttcgtcgtcgtcgtcttcttcCCGGAGCTGCATCGTTTTGTCCGGCGGAGGCG 240
| | |||||||||||| | | | | ||||||||| ||||||||||| |
Sbjct 130 -G--G--ATCGTCGTCGTCG------T--C---G-TACATCGTTTTATCCGGCGGAGGAG 172
Query 241 GAGAGGGAAGAAGCGGAATCCCTAATGTTATCTTAATCTGTCGTGTTGATCTAAACACCA 300
|||| ||| |||| ||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct 173 GAGAAGGACGAAGTGGAATACCTAATGTCATCTTAATCTGTCGTGTTGATCTCCACACCA 232
Query 301 ATTCTCTCTCGGAACAACCT-TTGGGTAGGCTTGTGGTTGGCACTGATCTACCTTATCGT 359
|||||||||| ||||||||| || ||||||| |||| |||||||||||||||||||||||
Sbjct 233 ATTCTCTCTCTGAACAACCTATT-GGTAGGCGTGTGATTGGCACTGATCTACCTTATCGT 291
Query 360 ATGGCTGTTCATCCTCGGGAAGGTGGTCTTATTTGCGCATTGCCTAACAGTTGCAGACTG 419
|||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 292 ATGGCTATTCATCCTCGTCAAGGTGGTCTTATTTGTGCATTGCCTAACAGTTGCAGACTG 351
Query 420 TTTCATTGGGAAGACATTATGAGCCGAGAGGATAATCAGGCTGGTGAAGAGTCAGAGAAA 479
||| |||||||| ||||||| || | || |||||| | | |||||||||||||||
Sbjct 352 TTTGATTGGGAAAACATTAT-AG-AG-GATGATAAT---G--AG-GAAGAGTCAGAGAAA 402
Query 480 G-TGATTAAAGAGTTAAAAGATGTTGGACAACAATTGGCTCTGGC-TTTCGATCAGGAGG 537
| || |||||||||||||||||||||||||||| ||| |||| | ||| ||||||| |
Sbjct 403 GTTG-TTAAAGAGTTAAAAGATGTTGGACAACAGTTGTCTCTCTCGTTT-AATCAGGATG 460
Query 538 GGTCTGTTCTCGCCGCTGGTGCGGAGGATGGGACTTTGAGGGTTTTTGAATGGCCCAGCA 597
|| ||||||| || ||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 461 GGACTGTTCTAGCTACTGGTGCAGAGGATGGGACTTTGAGGGTTTTTGAATGGCCAAGCA 520
Query 598 TGAAAACGTTACTTAATGAGTCTCAGGCTCATTCATCAGTTAAAAGCCTGACTTTCAGCG 657
|||| || ||||||||||||||| || | ||| |||||||||||||||| ||||||||||
Sbjct 521 TGAAGACTTTACTTAATGAGTCTAAGACACATGCATCAGTTAAAAGCCTAACTTTCAGCG 580
Query 658 AAAGTGGTAAATTTCTTGTATCTCTT-GACGGTCCAGTTTGTCGGGTTTGGGATGTGAAT 716
|||||||||| ||||||||||||||| || | |||| |||||||||||||||||||||||
Sbjct 581 AAAGTGGTAAGTTTCTTGTATCTCTTGGA-GCTCCACTTTGTCGGGTTTGGGATGTGAAT 639
Query 717 GCTTCTGCTGCCGTTGCCAGTCTATCAAAAGAGAAGGACGAGATGTTTGCCTCCTGTAGA 776
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 640 GCTTCTGCTGCTATTGCCAGTCTATCAAAAGAGAAGGACGAGATGTTTGCCTCGTGTAGA 699
Query 777 TTCTCTGTAGACAGTGCAGGCAATGAAGTTCTTTACATTGCTGCAAACACTGAACGTGGT 836
||||||||||||| | |||||| |||||||||||| |||||||||||||| ||||||||
Sbjct 700 TTCTCTGTAGACAATTCAGGCAGTGAAGTTCTTTATGTTGCTGCAAACACTCAACGTGGT 759
Query 837 GGGAGTATTATAACATATGATTCAAAATCATGGAAAAGAA-AATGGTCGAAGCCTAT-AA 894
|||||||||||||||| ||| ||| |||||||| ||||| || | || |||| ||| ||
Sbjct 760 GGGAGTATTATAACATGGGATACAACATCATGGAGAAGAAGAA-GTTCAAAGCTTATTAA 818
Query 895 AA-AAG-AACTCTATATCAGCCTTTAATGTCTCAGCTGATGGAAAGCTTCTTGCAATAGG 952
|| || ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||
Sbjct 819 AAGAAACAACTCTATATCTGCCTTTAATGTCTCAGCTGATGGGAAGCTTCTTGCAGTAGG 878
Query 953 CACCCTTGAAGGAGATGTTTTAATACTTGAACCGACGA-GAATGCAAACTATCCAAGTCG 1011
||||| |||||||||||||||||| |||| |||| | || ||||||||| |||| |||
Sbjct 879 AACCCTCGAAGGAGATGTTTTAATAATTGATTCGACAAAGA-TGCAAACTAACCAAATCG 937
Query 1012 TCAAGAAAGCGCATCTCGGTTTGGTCACAGCGCTGACTTTCTCCCCTGATTCAAGGGGCT 1071
|||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||
Sbjct 938 TCAAGAAAGCTCATCTCGGTTTGGTCACCGCACTGACTTTCTCCCCTGATTCAAGGTGCT 997
Query 1072 TAGTGTCGGTATCTTTCGACTCAAGGGCAAGGCTGACCATGATTGAACAAAAGGGTGACA 1131
||||||| |||||||| ||||||||||||||||| ||| |||| ||||||||||||| |
Sbjct 998 TAGTGTCAGTATCTTTTGACTCAAGGGCAAGGCTAACCGTGATCAAACAAAAGGGTGAAA 1057
Query 1132 AACCTGGAATA-AG--GTGG-TGGCTACTGATT-TTATTGGTAGTGTTACTATACGTGGT 1186
||| | || || | |||| |||| | ||| || || | ||||| ||||||||||
Sbjct 1058 AACGTCGAGTATATCTGTGGGTGGCGGC--ATTGTTGTT--T-GTGTTGGTATACGTGGT 1112
Query 1187 TGCATATTATTAT-ATGAAGGCAAAGGGTG-TCATACCTTA 1225
| ||||||| | ||| ||||| ||| | |||||| |||
Sbjct 1113 TTTGTATTATT-TGATGGTGGCAATGGG-GATCATACATTA 1151
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70280763000
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5