BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484066
Length=2469
Score E
Sequences producing significant alignments: (Bits) Value
AT2G01480.1 | Symbols: | O-fucosyltransferase family protein |... 3592 0.0
AT1G14970.1 | Symbols: | O-fucosyltransferase family protein |... 1526 0.0
> AT2G01480.1 | Symbols: | O-fucosyltransferase family protein
| chr2:216722-220989 FORWARD LENGTH=2610
Length=2610
Score = 3592 bits (1945), Expect = 0.0
Identities = 2303/2464 (93%), Gaps = 72/2464 (3%)
Strand=Plus/Plus
Query 1 GGGCATGTGACTGATCACGGCTTTGCCTCCACCGCATAAAGCTCCCTTCACAGATAGATT 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 26 GGGCATGTGACTGATCACGGCTTTGCCTCCACCGCATAAAGCTCCCTTCACAGATACA-T 84
Query 61 ACActctctttctctctctcCCGGCGTTTAATT-TTCTAATTTCACAACCGTGCTCCGCC 119
||||||||||||||||||| ||||||||| ||| |||| ||||| | ||||| |||||||
Sbjct 85 ACACTCTCTTTCTCTCTCTTCCGGCGTTT-ATTCTTCTTATTTCGCCACCGTCCTCCGCC 143
Query 120 GCCGTCTCCGCCGTGGGGACTTATATCGCCGCCTATTTCACGACCTGCCGCCACCGCCGG 179
|||| | | || ||||||||||| | | | |||||||||||||||||||||||||
Sbjct 144 GCCG--T--G--GT--GGACTTATATCTCTG-C-GTTTCACGACCTGCCGCCACCGCCGG 193
Query 180 CGATAGGTTT-AATGATGAATTAAGGCGTTGTCgagagagagagagagagGAAGGGATTG 238
|||||||||| |||||||||||||||||||| | ||||||||| ||| | | |||||
Sbjct 194 CGATAGGTTTCAATGATGAATTAAGGCGTTG--GCCAGAGAGAGA-AGA-G-A--GATTG 246
Query 239 AGATCTGTCGATATGCTAGCGAAAAATCGGCTGCCGGGAAGCGGCCACACTACTCCGTCT 298
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 247 AGATCTGTCGATATGCTAGCGAAGAATCGGCTGCCGGGAAGCGGCCACACTACTCCGTCT 306
Query 299 CCTCCGGCGTCTCCTCGCCGTTCTCCTCGTTACCGTCACGGTCGGTCTAAAGCCGCCGCC 358
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 307 CCTCCGGCATCTCCTCGCCGTTCTCCTCGTTATCGTCACGGTCGGTCTAAAGCCGCCGCC 366
Query 359 GGTAGTAGATTTCCTACGGTTCAACCAAGTCGGACCCTCGCTCATCGTCTCTCTTGGATC 418
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 367 GGTAGTAGATTTCCTACGGTTCAACCAAGTCGGACCCTCGCTCATCGCCTCTCGTGGATC 426
Query 419 CTCTTATCGGTTCTTCTCCGTCGCCAGGGAATATTCCTATTCGCTCCTCTAATCTATATC 478
||||||||||||||||||||||| ||||| || ||| |||||||||||||||||||||||
Sbjct 427 CTCTTATCGGTTCTTCTCCGTCGTCAGGGGATTTTCTTATTCGCTCCTCTAATCTATATC 486
Query 479 TCTTGTATGCTCCTTTACATGGGAACCGTCTCGTTCGATGTTGTTCCAATCATACAGCGT 538
||||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||
Sbjct 487 TCTTGTATGCTGCTTTACATGGGAACCGTCTCCTTCGACGTTGTTCCAATCATTCAGCGT 546
Query 539 CGACCTCCGCCAGGATCCGTTTACAAAAGCCCTCAGGTTTACGCCAAGCTCCGTCCTGAG 598
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 CGACCTCCTCCAGGATCCGTTTACAAAAGCCCTCAGGTTTACGCCAAGCTCCGTCCTGAG 606
Query 599 ATGGACGCCGATAATTCCACCGCTGATGCCATAACAACCATTTGGAAACATTCCTATAAA 658
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 607 ATGGACGCCGATAATTCCACCGCTGATGCCATAACAACCATCTGGAAACATTCCTATAAA 666
Query 659 GGTGGTGAATGGAAGCCCTACGTGAACAAGTCTACTGGAGACTTGCCCGAGTCAAACGGT 718
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 667 GGTGGTGAATGGAAGCCGTACGTGAACAAGTCTACTGGAGACTTGCCTGAGTCAAACGGT 726
Query 719 TTCATATATGTCGAGGCAAACGGAGGCTTGAATCAGCAGCGGACATCGATATGCAATGCG 778
| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 727 TACATATATGTTGAGGCAAATGGAGGCTTGAATCAGCAGCGGACATCGATATGCAATGCG 786
Query 779 GTTGCTGTGGCAGGCTATCTTAATGCAACTCTAGTAATTCCCAACTTTCACTATCACAGC 838
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 GTTGCTGTGGCAGGATATCTTAATGCAACTCTAGTAATTCCCAACTTTCACTATCACAGC 846
Query 839 ATATGGAGAGATCCAAGTAAATTTGGGGACATCTACGATGAAGATTTCTTTGTTAGTACC 898
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 847 ATATGGAGAGATCCAAGTAAATTTGGGGACATCTACGATGAAGAGTTCTTTGTCAGTACC 906
Query 899 TTAGCAAATGATGTGCGGGTGGTTGATACAATTCCTGAATATCTAATGGAGCGTTTTGAC 958
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 TTATCAAATGATGTGCGGGTGGTTGATACAATTCCTGAATATCTAATGGAGCGTTTTGAC 966
Query 959 TACAACATGACAAATGTCTATAACTTCAGAGTTAAAGCATGGTCACCTATTCAATATTAT 1018
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 CATAACATGACAAATGTCTATAACTTCAGAGTTAAAGCATGGTCACCTATTCAATATTAT 1026
Query 1019 CGAGACTCGATCTTGCCGAAGCTGCTTGAGGAGAAGATTATACGAATATCTCCATTTGCA 1078
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1027 CGAGACTCGATCTTGCCGAAACTTCTTGAGGAGAAGATTATACGAATATCTCCATTTGCA 1086
Query 1079 AATAGACTTTCTTTTGATGCTCCGCAAGCTGTCCAGAGACTTAGATGTTTGGCGAATTAT 1138
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1087 AATAGACTTTCTTTTGATGCTCCTCAAGCTGTCCAGAGACTTAGATGTTTGGCGAATTAC 1146
Query 1139 GAAGCCCTGAAGTTTTCGAAACCCATACTAACCCTAGGAGAAACACTGGTGAAGAGAATG 1198
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1147 GAAGCCCTGAAGTTTTCGAAAACCATACTAACCCTAGGAGAAACACTGGTGAAGAGAATG 1206
Query 1199 AAAGAGCAAAGTGCAAACCACGGCGCAAAATACGTTTCTGTACATCTGCGTTTTGAAGAG 1258
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1207 AAAGAGCAAAGTGCAAACCACGGTGCAAAATACGTGTCTGTACATCTGCGTTTTGAAGAG 1266
Query 1259 GACATGGTAGCTTTCTCTTGTTGCATATTTGATGGTGGGAACCAAGAAAAACAAGATATG 1318
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1267 GACATGGTAGCTTTCTCCTGTTGCATATTTGATGGTGGGAACCAAGAAAAACAAGATATG 1326
Query 1319 ATTGCAGCAAGAGAAAGAGGATGGAAAGGAAAGTTCACAAAACCAGGTCGTGTTATACGA 1378
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1327 ATTGCAGCAAGAGAACGAGGATGGAAAGGAAAGTTCACAAAACCAGGCCGTGTTATACGA 1386
Query 1379 CCTGGTGCTATCAGGCAAAACGGAAAATGCCCTTTGACTCCTTTAGAGGTGGGTTTAATG 1438
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1387 CCTGGTGCTATCAGGCAAAACGGAAAATGCCCTTTAACTCCTTTAGAGGTGGGTTTAATG 1446
Query 1439 CTTAGAGGAATGGGGTTCAACAAAAGCACATATATTTACCTTGCGTCTGGTGAAATATAT 1498
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 1447 CTTAGAGGAATGGGGTTCAACAAAAGCACATATATTTTCCTCGCGTCTGGTGAAATATAT 1506
Query 1499 GACGCGAATCGAACTATGGCCCCGCTACTAGAGATGTTCCC-AATTTACAAACTAAGGAG 1557
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1507 GATGCGAATCGAACTATGGCCCCGCTACTAGAGATGTTCCCAAATTTACAAACTAAGGAG 1566
Query 1558 ATGCTTGCATCAGAGGAGGAACTTGCTCCATATAAGAAACTTCTCTTCCAGAATGGCTGC 1617
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1567 ATGCTTGCATCAGAGGAGGAACTTGCTCCATATAAG-AATTTCTCTTCCAGAATGGCTGC 1625
Query 1618 AATAGATTACACGGTCTGTCTCCACAGTGAGGTATTTGTGACCACGCAAGGTGGAAACTT 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 AATAGATTACACGGTCTGTCTCCACAGTGAGGTATTTGTGACCACGCAAGGTGGAAACTT 1685
Query 1678 TCCTCATTTTCTCATGGGTCATCGGAGATATTTGTTTGGAGGACATTCGAAGACCATTAG 1737
||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 1686 TCCTCATTTCCTCATGGGTCATCGGAGATATATGTTTGGAGGACATTCCAAGACCATTAG 1745
Query 1738 ACCGGACAAGCGAAAGTTAGCAATTCTCTTTGACAATCCCAACATCGGATGGCGGAGTTT 1797
||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1746 ACCAGACAAGCGAAAGTTAGCAATCCTCTTTGACAATCCAAACATCGGATGGCGGAGTTT 1805
Query 1798 TAAACGTCAGATGCTAAACATGAGGTCTCATAGTGACTCAAAGGGGTTTGAGCTAAAACG 1857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1806 TAAACGTCAGATGCTAAACATGAGGTCTCATAGTGACTCAAAGGGGTTTGAGCTAAAACG 1865
Query 1858 ACCTAATGACTCCATTTACACATTCCCTTGCCCTGACTGCATGTCCCGTAGGAACAAAAC 1917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1866 ACCTAATGACTCCATTTACACATTCCCTTGCCCTGACTGCATGTCCCGTAGGAACAAAAC 1925
Query 1918 AACAACCCCAGATTCCAGACCACCTCCTGTCACCTGAAACACACACATTTGATTACCGGC 1977
|||||||||||| || ||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1926 AACAACCCCAGAATCGAGACCACCTCCTGCCACCTGAAA-ACACACATTTGATTACCGGC 1984
Query 1978 CTTCCAGAATCCGCTTCTACAGGCTATGTTCATTCCTTGTAATTCTAATTCTTTCAAACC 2037
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1985 CTTCCAGAATCTGCTTCTACAGGCTACGTTCATTCCTTGTAATTCTAATTCTTTCAAATC 2044
Query 2038 AGACA--GGAC-TTAGTAACTCGGCCTGCCCAGAATTTTAGGGA-GACAGCGTTTGAAGG 2093
||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||| |
Sbjct 2045 AGACACAGGACCTTAGTGACTCGGCCTGCCCAGAATTTTAGGGAAGACAGCGTTTGAATG 2104
Query 2094 GGCCGCAGAATCGTCTATTTAT-CTCCAGGGAGGTTAGCCGAGGAGTAACAGCCACAACA 2152
||||| ||||| ||||||||| |||| || | ||||||||||||||||||||
Sbjct 2105 GGCCGTGGAATCATCTATTTATTCTCC-GG--------C-GAGGAGTAACAGCCACAACA 2154
Query 2153 TTGTTTGATACTTTTGACACATTGAAGCTGATGTATCTAACAGGAGAGACAAGATTGAAG 2212
||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 2155 TTGTTTGATACCTTTGACACATTGAAGCTGATGTATCTAACAGGAAAGACGAGATTGAAG 2214
Query 2213 TTTTAACAGAAT----AG--GA--CAg--c---gttt-ggat----tttgg-t---g-t- 2248
|||||||| | | || | | | | | | ||| ||||| | | |
Sbjct 2215 TTTTAACACATTCCCTAGCTGCTGCTGGGCAAAGAATAGGACAGCGTTTGGATTTTGGTG 2274
Query 2249 ttttatgcttggggtgttttgc-ggtttgaag---cgtttgcgttttgtacattttgtAA 2304
|||| | |||||||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct 2275 TTTTTTTCTTGGGGTGTTTTGGTGGTTTGAAGAAGCGTTTGCGTTTTGTACATTTTGTGA 2334
Query 2305 ACGCAGTCTTTGTGTTAGGAGATATGTAGAGAGA--CGGACAAGGG--ATATAGGAAGCT 2360
|||||| ||||||||||||||||||||||||||| |||||||||| | | | ||||||
Sbjct 2335 ACGCAGGCTTTGTGTTAGGAGATATGTAGAGAGAGACGGACAAGGGGGAGAAAAGAAGCT 2394
Query 2361 GCCCGAAAAGTTTTGTACATTTGATTTGGTTAGAGATCATTGTGtcttcttttcttttct 2420
|||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 2395 GCCCTAAAAGTTTTGTACATT-GATTTGGTTAGAGATCATTGTCTCTTCTTTTCTTTTCT 2453
Query 2421 tttc 2424
||||
Sbjct 2454 TTTC 2457
> AT1G14970.1 | Symbols: | O-fucosyltransferase family protein
| chr1:5161949-5164917 REVERSE LENGTH=1825
Length=1825
Score = 1526 bits (826), Expect = 0.0
Identities = 1322/1559 (85%), Gaps = 44/1559 (3%)
Strand=Plus/Plus
Query 385 AAGTCGGACCCTCGCTCATCGTCTCTCTTGGATCCTCTTATCGGTTCTTCTCCGTCGCCA 444
|||||||| | ||||||| |||||||| |||||| | ||||| ||||||||||| || ||
Sbjct 138 AAGTCGGAACGTCGCTCACCGTCTCTCATGGATCATTTTATCTGTTCTTCTCCGGCGTCA 197
Query 445 GGGAATAT-TCCTATTCGCTCCTCTAATCTATATCTCTTGTATGCTCCTTTACATGGGA- 502
|||||| | |||| ||||||||| | ||||| ||||| |||||||| ||| || |
Sbjct 198 GGGAAT-TCTCCTTTTCGCTCCTATCATCTACATCTCCTGTATGCT--TTTTCA-CCTAC 253
Query 503 AC-CGTC-TCGTTCGATGTTGT-TCCAATCATACAGCGTCGACCTCCGCCAGGATCCGTT 559
|| || | ||||| |||| | ||| || || || || || ||| | || ||||||||
Sbjct 254 ACGCGGCGTCGTTTGATG-CCTCTCCCATTATCCACCGCCGTCCTGCTCCGGGATCCGTC 312
Query 560 TACAAAAGCCCTCAGGTTTACGCCAAGC-TC-CGTCCTGAGATGGACGCCGATAATTCCA 617
||| ||||||||||||||||| | || || || | ||||| || ||||||||| |||
Sbjct 313 TACCGGAGCCCTCAGGTTTACGCTAGGCTTCGCG-GC-GAGATTGAAGCCGATAATACCA 370
Query 618 CCGCTGATGCCATAACAACCATTTGGAAACATTCCTATAAAGGTGGT-GAATGGAAGCCC 676
| |||||||| ||| |||| |||||||| | ||||||||||||| || |||||||||||
Sbjct 371 CGGCTGATGCGATATCAACAATTTGGAAGCGTTCCTATAAAGGT-GTAGAATGGAAGCCA 429
Query 677 TACGTGAACAAGTCTACTGGAGACTTGCCCGAGTCAAACGGTTTCATATATGTCGAGGCA 736
| ||||||| ||||||||||| || || | |||||| |||||||||| | | ||||||
Sbjct 430 TGTGTGAACATGTCTACTGGAGTTTTACCTGTGTCAAATGGTTTCATATTTATTGAGGCA 489
Query 737 AACGGAGGCTTGAATCAGCAGCGGACATCGATATGCAATGCGGTTGCTGTGGCAGGCTAT 796
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 490 AATGGAGGCTTGAATCAGCAGCGGACTTCGATATGCAATGCGGTTGCTGTGGCAGGCTAC 549
Query 797 CTTAATGCAACTCTAGTAATTCCCAACTTTCACTATCACAGCATATGGAGAGATCCAAGT 856
|||||||| || || |||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 550 CTTAATGCGACCCTTGTAATTCCCAACTTTCACTATCACAGCATATGGAAAGATCCGAGT 609
Query 857 AAATTTGGGGACATCTACGATGAAGATTTCTTTGTT-AGTACCTTAGCAAATGATGTGCG 915
||||||||||||||||| |||||||| | |||| | | |||||||||||||||||||||
Sbjct 610 AAATTTGGGGACATCTATGATGAAGAGTACTTTATCGA-TACCTTAGCAAATGATGTGCG 668
Query 916 GGTGGTTGATACAATTCCTGAATATCTA-ATGGAGCGTTTTGACTACAACATGACAAATG 974
|||||| |||||| |||||||||| || ||||||||||||||||| ||| |||||||||
Sbjct 669 GGTGGTCGATACAGTTCCTGAATA-CTTGATGGAGCGTTTTGACTATAACTTGACAAATG 727
Query 975 TCTATAACTTCAGAGTTAAAGCATGGTCACCTAT-TCAATATTATCGAGACTC-GATCTT 1032
|||| ||||||||||||||||||||| |||| | || ||||| || ||||| | || |
Sbjct 728 TCTACAACTTCAGAGTTAAAGCATGGGCACCCACCTCC-TATTACCGGGACTCAG-TCCT 785
Query 1033 GCCGAAGCTGCTTGAGGAGAAGATTATACGAATATCTCCATTTGCAAATAGACTTTCTTT 1092
||| ||||||||||| || ||| ||||| |||| || |||||||||||||||||||| ||
Sbjct 786 GCCAAAGCTGCTTGAAGAAAAGGTTATAAGAATTTCCCCATTTGCAAATAGACTTTCGTT 845
Query 1093 TGATGCTCCGCAAGCTGTCCAGAGACTTAGATGTTTGGCGAATTATGAAGCCCTGA-AGT 1151
||||||||| | ||||||||||||| ||||||||||||||||| ||| |||| || | |
Sbjct 846 TGATGCTCCTCGAGCTGTCCAGAGATTTAGATGTTTGGCGAATAATGTAGCCTTGCGA-T 904
Query 1152 TTTCGAAACCCATACTAACCCTAGGAGAAACACTGGTGAAGAGAATGAAAGAG-CAAAGT 1210
|||| ||||||||||| |||| |||||||||| ||||||| | |||||| | | | |||
Sbjct 905 TTTCAAAACCCATACTGACCCAAGGAGAAACATTGGTGAACAAAATGAAGG-GTCTTAGT 963
Query 1211 GCAAACCACGGCGCAAAATACGTTTCTGTACATCTGCGTTTTGAAGAGGACATGGTAGCT 1270
|||||| ||| || |||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct 964 GCAAACAACGCCGGGAAATACGTTTCTGTGCATCTTCGTTTTGAAGAGGATATGGTTGCG 1023
Query 1271 TTCTCTTGTTGCATATTTGATGGTGG-GAACCAAGAAAAACAAGATATGATTGCAGCAAG 1329
||||||||||| ||||||||||||| || ||||||||||||||| |||||||| || ||
Sbjct 1024 TTCTCTTGTTGTGTATTTGATGGTGGAGA-CCAAGAAAAACAAGACATGATTGCCGCTAG 1082
Query 1330 AGAAAGAGGATGGAAAGGAAAGTTCACAAAACCAGGTCGTGTTATACGACCTGGTGCTAT 1389
|||| ||||||||||||| |||||||||||||| || ||||| |||||||| || ||||
Sbjct 1083 AGAACGAGGATGGAAAGGGAAGTTCACAAAACCGGGCCGTGTGATACGACCAGGAGCTAA 1142
Query 1390 CAGGCAAAACGGAAAATGCCCTTTGACTCCTTTAGAGGTGGGTTTAATGCTTAGAGGAAT 1449
||||| || || ||||||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct 1143 CAGGCTCAATGGGAAATGCCCTTTAACTCCTTTAGAGGTCGGTTTGATGCTTAGAGGAAT 1202
Query 1450 GGGGTTCAACAAAAGCACATATAT-TTACCTTGC-GTCTGGT--GAAATATATGACGCGA 1505
||| ||||||||||| |||||||| || |||||| | |||| || ||||| | ||| |
Sbjct 1203 GGGCTTCAACAAAAGTACATATATATT-CCTTGCCG-CTGGCCCGATATATA-G-CGCAA 1258
Query 1506 ATCGAACTATGGCCCCGCTACTAGAGATGTTCCC-AATTTACAAACTAAGGAGATGCTTG 1564
|| ||||||||||||| ||||| ||||||||||| ||| |||| || |||||||||||||
Sbjct 1259 ATAGAACTATGGCCCCACTACTCGAGATGTTCCCTAATCTACAGACAAAGGAGATGCTTG 1318
Query 1565 CATCAGAGGAGGAACTTGCTCCATATAAGAAACTTCTCTTCCAGAATGGCTGCAATAGAT 1624
| || ||||| || || ||||| | |||||| |||||| || ||||||||||||||||||
Sbjct 1319 CTTCTGAGGAAGACCTGGCTCCTTTTAAGAA-CTTCTCCTCGAGAATGGCTGCAATAGAT 1377
Query 1625 TACACGGTCTGTCTCCACAGTGAGGTATTTGTGACCACGCAAGGTGGAAACTTTCCTCAT 1684
|||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 1378 TACACGGTGTGTCTCCACAGTGAGGTATTTGTGACAACACAAGGTGGAAACTTCCCTCAT 1437
Query 1685 TTTCTCATGGGTCATCGGAGATATTTGTTTGGAGGACATTCGAAGACCATT-AGACCGGA 1743
|| |||||||| |||||||| |||||||||||||||||||| ||||| ||| || || ||
Sbjct 1438 TTCCTCATGGGGCATCGGAGGTATTTGTTTGGAGGACATTCAAAGACGATTCAG-CCAGA 1496
Query 1744 CAAGCGAAAGTTAGCAATTCTCTTTGACAATCCCAACATCGGATGGCGGAGTTTTAAACG 1803
||||||||||||||| | ||||||||||||||||| | |||||| |||||||||||
Sbjct 1497 CAAGCGAAAGTTAGCCGTACTCTTTGACAATCCCAAGTTGGGATGGAAAAGTTTTAAACG 1556
Query 1804 TCAGATGCTAAACATGAGGTCTCATAGTGACTCAAAGGGGTTTGAGCTAAAACGACCTAA 1863
|| ||||||| |||||||| ||||||||||| |||||||||||||| |||||| | ||
Sbjct 1557 GCAAATGCTAAGTATGAGGTCCCATAGTGACTCCAAGGGGTTTGAGCTGAAACGATC-AA 1615
Query 1864 -TGACTCCATTTACACATTCCCTTGCCCTGACTGCATGTCCCGTAGGAACAAAACAACA 1921
|||||||||||||| ||||||||| ||||| || |||| ||| | |||||||||||||
Sbjct 1616 GTGACTCCATTTACATATTCCCTTGTCCTGATTGTATGTGCCGGAAGAACAAAACAACA 1674
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122507674806
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5