BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484121
Length=3537
Score E
Sequences producing significant alignments: (Bits) Value
AT2G01980.1 | Symbols: SOS1, ATSOS1, ATNHX7 | sodium proton exc... 5515 0.0
AT1G14660.1 | Symbols: ATNHX8, NHX8 | Na+/H+ exchanger 8 | chr1... 1622 0.0
> AT2G01980.1 | Symbols: SOS1, ATSOS1, ATNHX7 | sodium proton exchanger,
putative (NHX7) (SOS1) | chr2:457010-463326 FORWARD
LENGTH=3682
Length=3682
Score = 5515 bits (2986), Expect = 0.0
Identities = 3343/3512 (95%), Gaps = 37/3512 (1%)
Strand=Plus/Plus
Query 22 TCAAAGAAAATGGCGACTGTAATCGACGCGACGATGACTTATCGATTTCTGGAGGAAGAG 81
||||| |||||| ||||||||||||||||||||||| | ||| ||||||||||||||| |
Sbjct 52 TCAAATAAAATGACGACTGTAATCGACGCGACGATGGCGTATAGATTTCTGGAGGAAGCG 111
Query 82 ACCG----G-----TTCGTCTTCTTCTTCCAAAGTAGAATCTAGCCCCGTCGACGCCGTT 132
|||| | ||| ||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 112 ACCGATTCGTCTTCTTCTTCTTCTTCTTCCAAACTAGAATCTAGCCCTGTCGACGCCGTT 171
Query 133 CTCTTCGTCGGAATGTCTCTGGTGCCCGGTATTGCTTCTAGGCATTTGCTTCGTGGAACT 192
||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 172 CTCTTCGTCGGAATGTCTCTGGTACTCGGTATTGCTTCTAGGCACTTGCTTCGTGGAACT 231
Query 193 AGGGTTCCTTACACCGTCGCTCTTCTCGTTATCGGAATTGCTCTTGGATCTCTCGAATAT 252
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 AGGGTTCCTTACACTGTCGCTCTTCTCGTTATCGGAATTGCTCTTGGATCTCTCGAATAT 291
Query 253 GGAGCTAAACATAACCTTGGAAAGATCGGCCATGGAATTCGTATCTGGAATGATATCGAT 312
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 292 GGAGCTAAACATAACCTTGGAAAGATCGGCCATGGAATTCGTATCTGGAATGAGATCGAT 351
Query 313 CCTGAACTTCTTTTGGCTGTTTTTCTTCCGGCTCTTCTTTTCGAAAGTTCGTTTTCAATG 372
|| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 352 CCAGAACTTCTTTTAGCTGTTTTTCTTCCGGCTCTTCTTTTCGAGAGTTCGTTTTCAATG 411
Query 373 GAAGTTCACCAGATCAAGAGGTGTCTGGGACAAATGGTGTTACTTGCTGGCCCTGGAGTT 432
||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 412 GAAGTTCACCAAATTAAGAGGTGTCTGGGACAAATGGTGTTACTTGCTGTCCCTGGAGTT 471
Query 433 CTTATTTCAACAGCTTGTCTCGGATGGCTTGTGAAGGTCACGTTTCCGTATGACTGGGAC 492
|||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||
Sbjct 472 CTTATTTCAACAGCTTGTCTTGGATCGCTTGTGAAGGTCACGTTTCCGTATGAATGGGAC 531
Query 493 TGGAAAACGTCGTTGTTGCTTGGGGGACTTCTAAGTGCTACCGACCCTGTTGCTGTTGTT 552
||||||||||| |||||||||||||||||| |||||||||| || || ||||||||||||
Sbjct 532 TGGAAAACGTCCTTGTTGCTTGGGGGACTTTTAAGTGCTACTGATCCGGTTGCTGTTGTT 591
Query 553 GCTTTATTAAAGGAGCTTGGTGCTAGTAAGAAGCTAAGCACCATAATTGAAGGGGAATCC 612
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 GCTTTGCTAAAGGAGCTTGGTGCTAGTAAGAAGCTAAGCACCATAATTGAAGGGGAATCC 651
Query 613 CTGATGAATGATGGGACGGCGATTG-TGCTTTTCCAGTTATTCTTAAAGATGG-TGATGG 670
||||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||
Sbjct 652 CTGATGAATGATGGGACGGCGATTGTTG-TTTTCCAGTTATTCTTAAAGATGGCT-ATGG 709
Query 671 GACAAAACTCTGACTGGGGTTCTATAATCAAATTTCTGCTTAAAGTCGCACTTGGAGCTG 730
| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 GGCAAAACTCTGACTGGAGTTCTATAATCAAATTTCTGCTTAAAGTCGCACTTGGAGCTG 769
Query 731 TAGGCATTGGTCTGGCGTTTGGCATTGCATCAGTTATTTGGCTCAAGTTCATATTCAATG 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 TAGGCATTGGTCTGGCGTTTGGCATTGCATCAGTTATTTGGCTCAAGTTCATATTCAATG 829
Query 791 ACACTGTAATAGAGATTACTCTTACAATTGCAGTGAGCTATTTCGCATACTACACTGCTC 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 830 ACACTGTAATAGAGATTACTCTTACAATTGCAGTGAGCTATTTCGCATACTACACTGCTC 889
Query 851 AAGAGTGGGCTGGGGCTTCTGGTGTTTTGACGGTGATGACTTTGGGCATGTTTTATGCTG 910
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 890 AAGAGTGGGCTGGGGCTTCTGGTGTTTTGACGGTCATGACTTTGGGCATGTTTTATGCTG 949
Query 911 CACTTGCAAGGACAGCCTTTAAAGGTGACAGTCAAAAAAGTTTGCATCACTTCTGGGAAA 970
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 950 CATTTGCAAGGACAGCCTTTAAAGGTGACAGTCAAAAAAGCTTGCATCACTTCTGGGAAA 1009
Query 971 TGGTTGCATATATTGCAAATACTTTGATATTTATCCTCAGTGGTGTTGTCATTGCTGAAG 1030
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1010 TGGTTGCATATATTGCAAACACTTTGATATTTATCCTCAGTGGTGTTGTCATTGCTGAAG 1069
Query 1031 GCATTCTCGACAGCGATAAGATTGCCTACCAAGGGAATTCATGGGGATTTCTTTTTCTAC 1090
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1070 GCATTCTCGACAGTGATAAGATTGCCTACCAAGGGAATTCATGGCGATTTCTTTTTCTGC 1129
Query 1091 TATATC-TTTACATCCAACTATCGCGTGGTGTTGTTGTTGGAGTTCTATATCCA-TTGTT 1148
|||| | ||||||||||||||||||||| ||||||||||||||||||||||||| || ||
Sbjct 1130 TATA-CGTTTACATCCAACTATCGCGTGTTGTTGTTGTTGGAGTTCTATATCCACTT-TT 1187
Query 1149 ATGTCGTTTTGGCTATGGTTTGGATTGGAAAGAATCCATTATACTCGTATGGTCTGGTTT 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 ATGTCGTTTTGGCTATGGTTTGGATTGGAAAGAATCCATTATACTCGTATGGTCTGGTTT 1247
Query 1209 GAGGGGTGCAGTGGCTCTTGCACTTTCTTTATCCGTGAAGCAATCAAGCGGAGATTCACA 1268
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1248 GAGGGGCGCAGTGGCTCTTGCACTTTCTTTATCCGTGAAGCAATCAAGCGGAAATTCACA 1307
Query 1269 TATCAGCAAGGAGACTGGAACATTGTTTCTTTTCTTCACGGGTGGAATTGTGTTCCTAAC 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 TATCAGCAAGGAGACTGGAACATTGTTTCTTTTCTTCACGGGTGGAATTGTGTTCCTAAC 1367
Query 1329 TCTGATAGTTAATGGATCCACTACCCAATTTGTTCTACGCCTTCTTCGCATGGACATTTT 1388
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1368 TCTGATAGTTAATGGATCCACTACCCAATTTGTTCTACGCCTTCTTCGCATGGATATTTT 1427
Query 1389 ACCAGCCCCCAAGAAACGAATATTGGAATATACAAAGTACGAAATGCTGAATAAGGCCTT 1448
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1428 ACCAGCCCCCAAGAAACGAATATTGGAATATACAAAGTACGAAATGTTGAATAAGGCCTT 1487
Query 1449 ACGAGCGTTTCAAGATCTAGGAGATGATGAGGAGCTAGGACCTGCTGACTGGCCTACAGT 1508
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1488 ACGAGCGTTTCAAGATCTAGGAGACGATGAGGAGCTAGGACCTGCTGACTGGCCTACAGT 1547
Query 1509 TGAGAGTTATATTTCAAGCCTAAAAAATTCAGAAGGGGAACTAGTTCATC--C-TCACAA 1565
||| ||||||||||||||||||||| ||||||||||||||||||||||| | ||||||
Sbjct 1548 TGAAAGTTATATTTCAAGCCTAAAAGGTTCAGAAGGGGAACTAGTTCATCATCCTCACAA 1607
Query 1566 TGGTTCTAAAAGTGGAAATCTTGACCCTAAGAGTTTAAAGGACATACGTATACGGTTCTT 1625
||| ||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1608 TGGCTCTAAAATTGGAAGTCTTGACCCTAAAAGTTTAAAGGACATACGTATGCGGTTCTT 1667
Query 1626 AAATGGTGTGCAAGCAGCTTACTGGGAGATGCTTGATGAAGGCAGAATATCTGA-GATTA 1684
|||||||||||||||| |||||||||||||||||||||| |||||||||||||| | |||
Sbjct 1668 AAATGGTGTGCAAGCAACTTACTGGGAGATGCTTGATGAGGGCAGAATATCTGAAG-TTA 1726
Query 1685 CTGCTAATATTTTGATGCAGTCAGTGGATGAGGCTCTTGATCAAGTTTCTACAAGTTTAT 1744
|||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||
Sbjct 1727 CTGCTAATATTTTGATGCAGTCAGTGGATGAGGCGCTTGATCAGGTTTCTACAACTTTAT 1786
Query 1745 GTGATTGGAGAGGTCTAAAACCACACGTCAATTTCCCAAATTACTACAAGTTTCTTCATT 1804
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1787 GTGATTGGAGAGGTCTAAAACCACATGTCAATTTCCCAAATTACTACAACTTTCTTCATT 1846
Query 1805 CTAAAATTATCCCACACAAGTTGGTCACATACTTTGCTGTCGAAAGACTGGAATCTGCTT 1864
||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1847 CTAAAGTTGTCCCACGCAAGTTGGTCACATACTTTGCTGTCGAAAGACTAGAATCTGCTT 1906
Query 1865 GCTACATTTCTGCTGCATTTCTTCGCGCGCATACAATTGCACGACAGCAATTGTATGATT 1924
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1907 GCTACATTTCTGCTGCGTTTCTTCGCGCACATACAATTGCACGACAGCAATTGTATGATT 1966
Query 1925 TTCTAGGGGAGAGTAATATTGGTTCCATTGTAATCAATGAAAGTGAAAAGGAAGGAGAGG 1984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1967 TTCTAGGGGAGAGTAATATTGGTTCCATTGTAATCAATGAAAGTGAAAAGGAAGGAGAGG 2026
Query 1985 AAGCGAAAGAGTTCTTGGAAAAAGTCCGATCTTCACTTCCTCAGGTTCTCCGTGTTGTGA 2044
|||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2027 AAGCAAAAAAGTTCTTGGAAAAAGTCCGATCTTCATTTCCTCAGGTTCTCCGTGTTGTGA 2086
Query 2045 AAACAAAACAAGTAACGCATTCAGTGTTGAATCATTTACTGGGTTACATTGAAAACCTCG 2104
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 2087 AAACAAAACAAGTAACATATTCAGTGTTGAATCATTTACTCGGTTACATTGAAAACCTCG 2146
Query 2105 AGAAGGTTGGCTTGTTGGAGCAAAAAGAAATCGCTCATCTTCATGATGCTGTCCAGACCG 2164
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AGAAGGTTGGCTTGTTGGAGGAAAAAGAAATCGCTCATCTTCATGATGCTGTCCAGACCG 2206
Query 2165 GCTTGAAAAAGCTTTTGAGAAACCCTCCAATAGTTAAACTTCCAAAATTGAGCGACATGA 2224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2207 GCTTGAAAAAGCTTTTGAGAAACCCTCCAATAGTTAAACTTCCAAAATTGAGCGACATGA 2266
Query 2225 TCACCTCACATCCGTTATCCGTTGCTCTTCCTCCCGCAATATGTGAACCTCTAAAACATT 2284
||||||||||||||||||| |||||||||||||| ||| | ||||||||| ||||||| |
Sbjct 2267 TCACCTCACATCCGTTATCGGTTGCTCTTCCTCCTGCATTTTGTGAACCTTTAAAACACT 2326
Query 2285 CGAAAAAAGAACCAATGAAGCTGCGTGGTGTCACACTTTATAAAGAAGGTTCAAAGCCAA 2344
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 2327 CGAAAAAAGAACCAATGAAACTGCGTGGTGTCACGCTTTATAAAGAAGGTTCAAAGCCAA 2386
Query 2345 CTGGAGTCTGGCTTATTTTTGATGGCATTGTTAAGTGGAAAAGCAAAAGCTTAAGCAATA 2404
|||||||||||||||||||||||||||| |||||||||||||| || | ||||||||| |
Sbjct 2387 CTGGAGTCTGGCTTATTTTTGATGGCATCGTTAAGTGGAAAAGTAAGATCTTAAGCAACA 2446
Query 2405 ATCACTCGTTGCATCCAACTTTTTCTCACGGTAGTACATTGGGACTCTACGAAGTCCTCA 2464
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2447 ATCACTCGCTGCATCCAACTTTTTCTCACGGTAGTACATTGGGACTCTACGAAGTCCTCA 2506
Query 2465 CTGGGAAGCCATATATGTGTGACATGATTACAGATTCTATGGTTCTTTGCTTTTTCATCG 2524
|||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct 2507 CTGGGAAGCCATATCTGTGCGACTTGATTACAGATTCTATGGTTCTTTGCTTTTTCATTG 2566
Query 2525 ATAGCGAAAAAATTCTCTCACTACAATCAGATTCTACCATCGATGATTTCCTTTGGCAGG 2584
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2567 ATAGCGAGAAAATTCTATCACTACAATCAGATTCTACCATCGATGATTTCCTTTGGCAGG 2626
Query 2585 AAAGTGCATTGGTTCTTCTGAAACTCTTGCGTCCTCAGATATTTGAAAATGTGGCTATGC 2644
||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||
Sbjct 2627 AAAGTGCATTGGTTCTTCTCAAACTCTTGCGTCCTCAGATATTTGAAAGTGTGGCAATGC 2686
Query 2645 AAGAATTACGAGCCCTTGTTTCAACTGAAAGCTCGAAACTGACAACATATGTGACGGGAG 2704
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2687 AAGAATTACGAGCCCTTGTTTCAACTGAAAGCTCGAAACTTACAACATATGTGACGGGAG 2746
Query 2705 AATCAATCGAAATCGACTGCAACAGCATTGGTTTGTTATTAGAAGGATTCGTAAAACCGG 2764
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2747 AATCAATCGAAATCGACTGCAACAGCATTGGTTTATTATTAGAAGGATTCGTAAAACCGG 2806
Query 2765 TTGGTATCCAAGAAGAGCTTATATCATCTCCCGCCGCATTATTACCTTCTAACGGGAATC 2824
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2807 TTGGTATCAAAGAAGAGCTTATATCATCTCCCGCCGCATTATCACCTTCTAACGGGAATC 2866
Query 2825 AAAGCTTCCATAATTCATCAGAAGCTTCAGGTATCATGAGAGTGAGTTTCTCACAACAAA 2884
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2867 AAAGCTTCCATAATTCATCAGAAGCTTCAGGTATCATGAGAGTCAGTTTCTCACAACAAG 2926
Query 2885 CAACACAATACAGTGTTGAGACAAGAGCAAGAGCAATCATCTTCAACATTGGAGCATTTG 2944
||||||| || | ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2927 CAACACAGTATATTGTTGAGACGAGAGCAAGAGCAATCATCTTCAACATTGGAGCATTTG 2986
Query 2945 GAGCTGATAGGACTCCACATCGAAGACCATCTACGTTAACACCACCACGTAGCTCAAGCT 3004
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2987 GAGCTGATAGGACTCTACATCGAAGACCATCTTCGTTAACACCACCACGTAGCTCAAGCT 3046
Query 3005 CTGATCAGCTTCAGAGATCATCATTTCGTAAAGAACACAGAGGTCTCATGAGCTGGCCTG 3064
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 3047 CTGATCAGCTTCAGAGATCAT--TT-CGTAAAGAACACAGAGGTCTCATGAGCTGGCCTG 3103
Query 3065 AAAGTATTTACAAAGCCAAACAACAACAAGAGATCAATAGAACGGCATTAAGTTTATCTG 3124
||| ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 3104 AAAATATTTAC---GCCAAACAACAACAAGAGATCAATAAAACGACATTAAGTTTATCTG 3160
Query 3125 AACGAGCAATGCAACTCAGCATTTTCGGCAGCATGGTCAATGTTTACAGAAGGAGTGCAA 3184
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||
Sbjct 3161 AACGAGCAATGCAACTCAGCATTTTCGGCAGCATGGTTAATGTGTACAGAAGGAGTGTAA 3220
Query 3185 GTTTCGGTGGGATCTATAATAACAAGTCACAAGATAACTTTTTGTACAAAAAACATCCAC 3244
||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||
Sbjct 3221 GTTTCGGTGGGATCTATAATAACAAGTTACAAGATAACTTGTTGTACAAAAAACTTCCAC 3280
Query 3245 TAAACTCAGCTCAAGGTCTCGTTTCAGCCAGATCAGAAAGTTCGATTGTGACCAAGAAGC 3304
||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 3281 TAAACCCAGCTCAAGGTCTCGTTTCAGCCAAATCAGAAAGTTCAATTGTGACCAAGAAGC 3340
Query 3305 AGCTTGAAACCCGTAAATATCCGTGTCAGGTTCCTCTGCAAGCGGAAAGCAGCAAAAGGC 3364
||||||||||||||||| || |||||||| |||||||| ||| ||||||||||| |||||
Sbjct 3341 AGCTTGAAACCCGTAAACATGCGTGTCAGCTTCCTCTGAAAGGGGAAAGCAGCACAAGGC 3400
Query 3365 GAAATACGATGGTTGTTGAATCAAGCGATGAAGAAGATGAAG--GAA----TCGTTGTGA 3418
|||||||||||||| |||||||||||||||||||||||| ||| |||||||||
Sbjct 3401 AAAATACGATGGTTG---AATCAAGCGATGAAGAAGATGAAGATGAAGGAATCGTTGTGA 3457
Query 3419 GAATCGATTCTCCGAGTAAAATCGTTTTCTGGAACGATCTATGAGCAGTGAGATGTTTGT 3478
||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||
Sbjct 3458 GAATCGATTCTCCGAGTAAAATCGTTTTCAGGAACGATCTATGAGAATTGAGATGTTTGT 3517
Query 3479 AACATAATAAAACAAAAATGTTAGCTTACTCT 3510
||||||| ||||||||| ||||||||||||||
Sbjct 3518 AACATAAGAAAACAAAATTGTTAGCTTACTCT 3549
> AT1G14660.1 | Symbols: ATNHX8, NHX8 | Na+/H+ exchanger 8 | chr1:5031972-5036448
REVERSE LENGTH=2471
Length=2471
Score = 1622 bits (878), Expect = 0.0
Identities = 1698/2090 (81%), Gaps = 71/2090 (3%)
Strand=Plus/Plus
Query 190 ACTAGGGTTCCTTACACCGTCGCTCTTCTCGTTATCGGAATTGCTCTTGGATCTCTCGAA 249
||||| ||||| |||||||||| ||||||||| ||||| ||| ||| ||||| || |||
Sbjct 172 ACTAGAGTTCCGTACACCGTCGTTCTTCTCGTCATCGGCATTTTTCTCGGATCCCTAGAA 231
Query 250 TATGGAGCTAAACATAACCTTGGAAAGATCGGCCATGGAATTCGTATCTGGAATGATATC 309
|||||| |||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct 232 TATGGAACTAAGCATAACCTTGGGAAGCTCGGCCATGGAATTCGTATCTGGAATGGTATC 291
Query 310 GATCCTGAACTTCTTTTGGCTGTTTTTCTTCCGGCTCTTCTTTTCGAAAGTTCGTTTTCA 369
| ||||| || ||||||||||||||||| || | |||||||||||| || || || ||
Sbjct 292 AACCCTGACCTACTTTTGGCTGTTTTTCTCCCTGTTCTTCTTTTCGAGAGCTCATTCTCC 351
Query 370 ATGGAAGTTCACCAGATCAAGAGGTGTCTGGGACAAATGGTGT-TACTTGCTGGCCCTGG 428
||||| || |||||||||||||| ||| ||||||||||||| | | |||||||| |||||
Sbjct 352 ATGGATGTGCACCAGATCAAGAGATGTATGGGACAAATGGT-TCTGCTTGCTGGACCTGG 410
Query 429 AGTTCTTATTTCAACAGCTTGTCTCGGATG-GCTTGTGAAGGTCACGTTTCCGTATGACT 487
|||||| ||||| || |||||||||| | ||| | ||| | || ||||| ||| |||
Sbjct 411 AGTTCTGATTTCCACCTTTTGTCTCGGA-GCTCTTATAAAGCTTACTTTTCCATATAACT 469
Query 488 GGGACTGGAAAACGTCGTTGTTGCTTGGGGGACTTCTAAGTGCTACCGACCCTGTTGCTG 547
||||||||||||| || ||||||||||| |||||| || | ||||||||||| || ||||
Sbjct 470 GGGACTGGAAAACATCATTGTTGCTTGGAGGACTTTTAGGAGCTACCGACCCCGTGGCTG 529
Query 548 TTGTTGCTTTATTAAAGGAGCTTGGTGCTAGTAAGAAGCTAAGCACCATAATTGAAGGGG 607
|||||||||| |||||||||||||||||||||||||| | | ||| ||||||| ||||
Sbjct 530 TTGTTGCTTTGCTAAAGGAGCTTGGTGCTAGTAAGAAGATGACCACGTTAATTGATGGGG 589
Query 608 AATCCCTGATGAATGATGGGACGGCGATTGTGCTTTTCCAGTTATTCTTAAAGATGGTGA 667
|||| || ||||| |||||| || ||||| |||| || |||||||| ||||||||||
Sbjct 590 AATCTCTCATGAACGATGGGGTATCGGTTGTGGTTTTTCAATTATTCTTCAAGATGGTGA 649
Query 668 TGGGACAAAACTCTGACTGGGGTTCTATAATCAAATTTC-TGCT-TAAAGTCGCACTT-G 724
|||| || |||||||| |||||||| ||||||||||||| || | ||| | || || |
Sbjct 650 TGGGGCATAACTCTGATTGGGGTTCCATAATCAAATTTCTTG-TCCAAA-ACTCA-TTCG 706
Query 725 GAGCTGTAGGCATTGGTCTGGCGTTTGGCATTGCATCAGTTATTTGGCTCAAGTTCATAT 784
||||||||||||||||||| || ||||| |||||||||||| ||||||| || |||||||
Sbjct 707 GAGCTGTAGGCATTGGTCTAGCTTTTGGAATTGCATCAGTTTTTTGGCTTAAATTCATAT 766
Query 785 TCAATGACACTGT-AATAGAGATTACTCTTACAATTGCAGTGAGCTATTTCGCATACTAC 843
|||||||||| || | |||| ||| | ||| || ||| |||||||||||| || |||
Sbjct 767 TCAATGACACGGTGGCT-CAGATCACTGTAACACTTTCAGCGAGCTATTTCGCCTATTAC 825
Query 844 ACTGCTCAAGAGTGGGCTGGGGCTTCTGGTGTTTTGACGGTGATGACTTTGGGCATGTTT 903
|||||||||||||||||||||| |||||| ||||||| || |||| |||||| ||||||
Sbjct 826 ACTGCTCAAGAGTGGGCTGGGGTTTCTGGAATTTTGACTGTCATGATTTTGGGGATGTTT 885
Query 904 TAT-GCTGCACTTGCAAGGACAGCCTTTAAAGGTGACAGTCAAAAAAGTTTGCATCACTT 962
| | |||||| ||||||||||||| ||||| || |||||||| | ||| ||||||||||
Sbjct 886 T-TCGCTGCATTTGCAAGGACAGCTTTTAAGGGGGACAGTCACCAGAGTCTGCATCACTT 944
Query 963 CTGGGAAATGGTTGCATATATTGCAAATAC-TTTGATATTTATCCTCAGTGGTGTTGTCA 1021
||||||||||| || || ||||||||||| | | | ||||| |||||||| ||| | |
Sbjct 945 CTGGGAAATGGCCGCTTACATTGCAAATACACTAG-TTTTTATGCTCAGTGGAGTTATTA 1003
Query 1022 TTGCTGAAGGCATTC-TCGACAG-C-GATAAGATTGCCTACCAAGGGAATTCATGGGGAT 1078
| |||||| || ||| | | | | | || || | | | ||| |||| || || ||| | |
Sbjct 1004 TCGCTGAAAGCGTTCTTAG-CGGTCAGACAATA-T-CTTACAAAGGAAACTCGTGGAGCT 1060
Query 1079 TTCTTTTTCTAC-TATATCTT-TACATCCAACTATCGCG-TGGTGTTGTTGTTGGAGTTC 1135
| ||||| || | |||| ||| || ||||||| || || | |||||||||||||||||
Sbjct 1061 TCCTTTTCCT-CTTATA-CTTGTATGTCCAACTTTCCCGCT-GTGTTGTTGTTGGAGTTT 1117
Query 1136 TATATCCATTGTTATGTCGTTTTGGCTATGGTTTGGATTGGAAAGAATCCATTATACTCG 1195
| || |||||| |||| |||| ||||||||| ||||||||||| |||||||| ||||||
Sbjct 1118 TGTACCCATTGCTATGCCGTTCTGGCTATGGGTTGGATTGGAAGGAATCCATCATACTCA 1177
Query 1196 TATGGTCTGGTTTGAGGGGTGCAGTGGCTCTTG-CACTTTCTTTATCCGTGAAGCAATCA 1254
|||||||| || |||||||| || | | || | || || |||| || || ||||||
Sbjct 1178 CGTGGTCTGGATTAAGGGGTGCTGTTTCGC-TGTCGCTCGCTCTATCTGTAAAACAATCA 1236
Query 1255 AGCGGAGATTCACATATCAG--CAAGGAGACTGGAACATTGTTTCTTTTCTTCACGGGTG 1312
|| ||| ||||| || |||| | | || || |||||| |||||| ||| |||| ||||
Sbjct 1237 AGTGGAAATTCATATCTCAGTTC-A-GATACGGGAACAAGGTTTCTATTCCTCACAGGTG 1294
Query 1313 GAATTGTGTTCCTAACTCTGATAGTTAATGGATCCACTACCCAATTTGTTC-TACGCCTT 1371
| ||||| ||||||||| || | ||||||||||||||||||||| ||| || | | ||||
Sbjct 1295 GGATTGTTTTCCTAACTTTGGTTGTTAATGGATCCACTACCCAA-TTGCTCTTGCACCTT 1353
Query 1372 CTTCGCATGGACATTTTACCAGCCCCCAAGAAACGAATATTGGAATATACAAAGTACGAA 1431
||||||||||||| |||| | ||| | ||||||||||||||||| |||||||||| |||
Sbjct 1354 CTTCGCATGGACACTTTAACGGCCACTAAGAAACGAATATTGGAGTATACAAAGTTTGAA 1413
Query 1432 ATGCTGAATAAGGCCTTACGAGCGTTTCAAGATCTAGGAGATGATGAGGAGCTAGGACCT 1491
||| |||| | || ||| ||| ||| || |||| |||||||| |||||||| ||| ||
Sbjct 1414 ATGATGAAGACTGCTTTAAAAGCTTTTGAAAATCTTGGAGATGACGAGGAGCTTGGATCT 1473
Query 1492 GCTGACTGGCCTACAGTTGA-GAGTTATATTTCAAGCCTAAAAAATTCAGAAGGGGA-AC 1549
|||||||||||||||||| | || ||||||||||| | ||| ||| |||| |||| ||
Sbjct 1474 GCTGACTGGCCTACAGTT-ATAAGACATATTTCAAGCTTGAAAGATTTAGAA-GGGAGAC 1531
Query 1550 TAGTTCATCCTCACAAT-GGTTCTAAAAG-TGGAAATCTTGACCCTAAGAGTTTAAAGGA 1607
|||| |||||||| || ||| | ||| ||||| ||||||||||| || | ||| |||
Sbjct 1532 AAGTTAATCCTCACGATGGGTAC--GAAGCTGGAAGTCTTGACCCTACGAATATAATGGA 1589
Query 1608 CATACGTATACGGTTCTTAAATGGTGTGCAAGCAGCTTACTGGGAGATGCTTGATGAAGG 1667
|||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 1590 CATACGTATACGCTTCTTAAATGGTGTCCAGGCAGCTTACTGGGAGATGCTTGATGATGG 1649
Query 1668 CAGAATATCTGAGAT-TACTGCTAATATTTTGATGCAGTCAGTGGATGAGGCTCTTGATC 1726
|||||| | | || |||||||||| |||||||||| ||||| |||||||| ||||| |
Sbjct 1650 GAGAATAACACA-ATGTACTGCTAATGTTTTGATGCAATCAGTAGATGAGGCACTTGACC 1708
Query 1727 AAGTTTCTACAAG---TTTATGTGATTGGAGAGGTCTAAAACCACACG-TCAATTTCCCA 1782
|||||||| || |||| | || ||||| ||| || |||| | | || ||||||||
Sbjct 1709 TTGTTTCTACCAGTTCTTTAAGCGACTGGAGGGGTTTAGAACCGCGTGTTC-ATTTCCCA 1767
Query 1783 AATTACTACAAGTTTCTTCATTCTAAAATTATCCCACACAAGTTGGTCACATACTTTGCT 1842
|||||||||||||||||||| || ||||||||||| |||||||| ||||| | |||| |
Sbjct 1768 AATTACTACAAGTTTCTTCAGTCAAAAATTATCCCCCACAAGTTAGTCACGCA-TTTGAT 1826
Query 1843 -GTCGAAAGACTGGAATCTGCTTGCTACATTTCTGCTGCATTTCTTCGCGCGCATACAAT 1901
|| |||||||||||||||||||| ||||||||| |||||||||| || || |||| ||
Sbjct 1827 CGTTGAAAGACTGGAATCTGCTTGTTACATTTCTTCTGCATTTCTCCGTGCCCATAGGAT 1886
Query 1902 TGCACGACAGCAATTGTATGAT-TTTCTAGGGGAGAGTAATATTGGTTCCATTGTAATCA 1960
||| |||||||||||| || || |||||||| | ||||| |||| || | ||||||||
Sbjct 1887 TGCGCGACAGCAATTGCAT-ATCTTTCTAGGTAACAGTAACATTGCCTCTACTGTAATCA 1945
Query 1961 ATGAAAGTGAAAAGGAAGGAGAGGAAGCGAAAGAGTTCTTGGAAAAAGTCCGATC-TTCA 2019
|||||||||| ||||||||| ||||| ||| ||||||||||| | ||||| | ||||
Sbjct 1946 ATGAAAGTGAGGTGGAAGGAGAAGAAGCAAAACAGTTCTTGGAAGATGTCCG-TGATTCA 2004
Query 2020 CTTCCTCAGGTTCTCCGTGTTGTGAAAACAAAACAAGTAACGCATTCA-GTGTTGAATCA 2078
||||||||||| | ||||| ||||||||| ||||||||| |||| | ||| |||||||
Sbjct 2005 TTTCCTCAGGTTTTGAGTGTTTTGAAAACAAGACAAGTAACACATT-ATGTGCTGAATCA 2063
Query 2079 TTTAC-TGGGTTACATTGAAAACCTCGAGAAGGTTGGCTTGTTGGAGCAAAAAGAAATCG 2137
| || ||| ||| ||| ||||||| ||||||||||||||||| ||| ||||||| |
Sbjct 2064 TCTAAATGG-TTATATTAAAAACCTTGAGAAGGTTGGCTTGTTAGAGGGAAAAGAAGTTT 2122
Query 2138 CTCATCTTCATGATGCTGTCCAGACCGGCTTGAAAAAGCTTTTGAGAAACCCTCCAAT-A 2196
||||||||||||||| ||| ||| | | |||||| ||||| ||||| | ||||| | |
Sbjct 2123 CTCATCTTCATGATGTTGTTCAGTCTGACTTGAAGAAGCTCCTGAGACATCCTCCT-TCA 2181
Query 2197 GTTAAACTTCCAAAAT-T-GAGCGA-CATGATCACCT-CACATCCGTTAT 2242
| ||||||||||| | | || ||| | |||||||| || |||| ||||
Sbjct 2182 CTAAAACTTCCAAA-TGTAGA-CGATC-TGATCACCAGCA-ATCCTTTAT 2227
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 176085969930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5