BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484127
Length=1977
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02040.1 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | p... 3020 0.0
AT1G62200.1 | Symbols: | Major facilitator superfamily protein... 704 0.0
> AT2G02040.1 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 |
peptide transporter 2 | chr2:487423-489832 FORWARD LENGTH=2002
Length=2002
Score = 3020 bits (1635), Expect = 0.0
Identities = 1886/2004 (94%), Gaps = 30/2004 (1%)
Strand=Plus/Plus
Query 1 AGTCGCCGGGaaaagtaaaataaaaaaCCGTCACGTCTTCTGATAAATAATAGAGTATCG 60
|||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||
Sbjct 2 AGTCGCCGGGAAAAGTAAAATAAAAAGCCGTCACGTC-TCCGATAAATAATAGAGTATCG 60
Query 61 ATAGATAGGTAGCTTCAACGTAAGGAATCTAAATTGGTTCTGCTC-AAAAACGAAAACGA 119
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 61 TTAGATAGGTAGCTTCAACGTAAGGAATCTAAATTGGTTCAGCTCAAAAAACGAAAACGA 120
Query 120 TGGGTTCCATTGAAGAAGAAGCAAGACCTCTCATCGAAGAAGGTTTAATATTACAGGAAG 179
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 121 TGGGTTCCATCGAAGAAGAAGCAAGACCTCTCATCGAAGAAGGTTTAATTTTACAGGAAG 180
Query 180 CGAAATTGTATGCTGAAGATGGTTCAGTGGACTTTAATGGAAACCCACCATTGAAGGAGA 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TGAAATTGTATGCTGAAGATGGTTCAGTGGACTTTAATGGAAACCCACCATTGAAGGAGA 240
Query 240 AAACAGGAAACTGGAAAGCTTGTCCTTTTATTCTTGGTAATGAATGTTGTGAGAGGCTAG 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AAACAGGAAACTGGAAAGCTTGTCCTTTTATTCTTGGTAATGAATGTTGTGAGAGGCTAG 300
Query 300 CTTACTATGGTATTGCTGGGAATCTTA-TCACTTACCTCACCACTAAGCTACATCAAGGA 358
||||||||||||||||||||||| ||| |||||||||||||||||||||| || ||||||
Sbjct 301 CTTACTATGGTATTGCTGGGAAT-TTAATCACTTACCTCACCACTAAGCTTCACCAAGGA 359
Query 359 AATGTGTCTGCTGCTACAAATGTTACTACATGGCAAGGGACTTGTTATCTTACTCCTCTT 418
||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct 360 AATGTTTCTGCTGCTACAAACGTTACCACATGGCAAGGGACTTGTTATCTCACTCCTCTC 419
Query 419 ATTGGAGCTGTTTTGGCCGATGCTTACTGGGGACGATACTGGACTATTGCTTGTTTCTCC 478
|||||||||||| |||| ||||||||||||||||| |||||||| || ||||||||||||
Sbjct 420 ATTGGAGCTGTTCTGGCTGATGCTTACTGGGGACGTTACTGGACCATCGCTTGTTTCTCC 479
Query 479 GGGATTTATTTCATCGGGATGTCGGCGTTAACTCTTTCAGCCTCAGTTCCGGCATTGAAG 538
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 480 GGGATTTATTTCATCGGGATGTCTGCGTTAACTCTTTCAGCTTCAGTTCCGGCATTGAAG 539
Query 539 CCAGCGGAATGTATTGGCGGTTTTTGTCCATCAGCAACGCCAGCTCAATATGCGATGTTC 598
||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||
Sbjct 540 CCAGCGGAATGTATTGGTGACTTTTGTCCATCTGCAACGCCAGCTCAGTATGCGATGTTC 599
Query 599 TTTGGCGGGCTTTACCTGATCGCCCTTGGCACTGGAGGTATCAAACCATGCGTCTCATCC 658
||||| ||||||||||||||||| ||||| ||||||||||||||||| || |||||||||
Sbjct 600 TTTGGTGGGCTTTACCTGATCGCTCTTGGAACTGGAGGTATCAAACCGTGTGTCTCATCC 659
Query 659 TTTGGTGCAGATCAGTTTGATGACACGGACTCGCGTGAACGAGTTAGAAAAGCTTCGTTC 718
|| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 660 TTCGGTGCCGATCAGTTTGATGACACGGACTCTCGGGAACGAGTTAGAAAAGCTTCGTTC 719
Query 719 TTTAACTGGTTTTACTTCTCCATCAATATTGGAGCACTTGTGTCATCTAGTCTTCTAGTT 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TTTAACTGGTTTTACTTCTCCATCAATATTGGAGCACTTGTGTCATCTAGTCTTCTAGTT 779
Query 779 TGGATTCAAGAGAATCGCGGGTGGGGTTTAGGATTTGGGATACCAACCGTGTTCATGGGA 838
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 780 TGGATTCAAGAGAATCGCGGGTGGGGTTTAGGGTTTGGGATACCAACAGTGTTCATGGGA 839
Query 839 CTTGCCATTGCAAGTTTCTTCTTTGGCACACCGCTTTACAGGTTTCAGAAACCTGGAGGA 898
|| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 840 CTAGCCATTGCAAGTTTCTTCTTTGGCACACCTCTTTATAGGTTTCAGAAACCTGGAGGA 899
Query 899 AGCCCGATAACTCGGATTTCCCAAGTCGTGGTTGCTTCATTCCGGAAATCATCTGTCAAA 958
||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 900 AGCCCTATAACTCGGATTTCCCAAGTCGTGGTTGCTTCGTTCCGGAAATCGTCTGTCAAA 959
Query 959 CTCCCTGAAGACCCCACGCTTCTGTATGAAACACAAGACAAGAACTCTGCTATTGCTGGA 1018
||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 960 GTCCCTGAAGACGCCACACTTCTGTATGAAACTCAAGACAAGAACTCTGCTATTGCTGGA 1019
Query 1019 AGTAGAAAAATCGAGTATACCGATGATTGCAAGTATCTTGACAAAGCCGCTGTTATCTCA 1078
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1020 AGTAGAAAAATCGAGCATACCGATGATTGCCAGTATCTTGACAAAGCCGCTGTTATCTCA 1079
Query 1079 GAAGAAGAATCGAAATCCGGAGATTATTCCAACTCGTGGAGACTATGCACGGTTACGCAA 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 GAAGAAGAATCGAAATCCGGAGATTATTCCAACTCGTGGAGACTATGCACGGTTACGCAA 1139
Query 1139 GTCGAAGAACTCAAGATTCTGATTCGAATGTTCCCAATCTGGGCTTCCGGTATAATTTTC 1198
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 1140 GTCGAAGAACTCAAGATTCTGATCCGAATGTTCCCAATCTGGGCTTCTGGTATCATTTTC 1199
Query 1199 TCAGCTGTATACGCACAAATGTCCACAATGTTTGTTCAACAAGGCCGAGCCATGAACTGC 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 TCAGCTGTATACGCACAAATGTCCACAATGTTTGTTCAACAAGGCCGAGCCATGAACTGC 1259
Query 1259 AAAATCGGATCGTTCCAGCTTCCTCCAGCAGCACTAGGGACATTCGACACTGCTAGCGTC 1318
||||| ||||| |||||||||||||| |||||||| |||||||||||||| || ||||||
Sbjct 1260 AAAATTGGATCATTCCAGCTTCCTCCTGCAGCACTCGGGACATTCGACACAGCAAGCGTC 1319
Query 1319 ATCATCTGGGTCCCGCTCTACGACCGGTTCATCATTCCCTTAGCAAGACGGTTCACAGGA 1378
||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1320 ATCATCTGGGTGCCGCTCTACGACCGGTTCATCGTTCCCTTAGCAAGAAAGTTCACAGGA 1379
Query 1379 GTAGACAAAGGATTCACGGAGATACAAAGAATGGGAATCGGTCTTTTTGTCTCTGTTCTC 1438
||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1380 GTAGACAAAGGATTCACTGAGATACAAAGAATGGGAATTGGTCTGTTTGTCTCTGTTCTC 1439
Query 1439 TGTATGGCAGCTGCAGCCATTGTCGAAATCATCCGTCTCCATATGGCCAACGACCTCGGA 1498
||||||||||||||||| || |||||||||||||||||||||||||||||||| || |||
Sbjct 1440 TGTATGGCAGCTGCAGCTATCGTCGAAATCATCCGTCTCCATATGGCCAACGATCTTGGA 1499
Query 1499 TTAGTCGAGTCCGGAGCCCCAGTTCCCATATCCGTCTTATGGCAGATTCCGCAGTACTTC 1558
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1500 TTAGTCGAGTCAGGAGCCCCAGTTCCCATATCCGTCTTGTGGCAGATTCCACAGTACTTC 1559
Query 1559 ATTCTCGGTGCAGCAGAAGTATTCTACTTCATCGGTCAGCTAGAATTCTTCTACGACCAA 1618
|||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1560 ATTCTCGGTGCAGCCGAAGTATTCTACTTCATCGGTCAGCTCGAGTTCTTCTACGACCAA 1619
Query 1619 TCTCCAGATGCAATGAGAAGCTTGTGCAGTGCCTTATCTCTTCTGACCACCGCACTGGGG 1678
||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| ||
Sbjct 1620 TCTCCAGATGCAATGAGAAGCTTGTGCAGTGCCTTGGCTCTTTTGACCAATGCACTTGGT 1679
Query 1679 AACTACTTGAGCTCGTTGATCCTCACGCTCGTGACTTATTTCACGACAAGAAATGGTCAA 1738
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 1680 AACTACTTGAGCTCGTTGATCCTCACGCTCGTGACTTATTTTACAACAAGAAATGGGCAA 1739
Query 1739 GAAGGTTGGATATCGGATAATCTCAATTCGGGTCATCTCGATTACTTCTTCTGGCTCTTG 1798
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1740 GAAGGTTGGATTTCGGATAATCTCAATTCAGGTCATCTCGATTACTTCTTCTGGCTCTTG 1799
Query 1799 GCTGGTCTTAGCCTTGTGAACATGGCGGTTTACTTCTTCTCTGCTGCTAGGTATAAGCAA 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 GCTGGTCTTAGCCTTGTGAACATGGCGGTTTACTTCTTCTCTGCTGCTAGGTATAAGCAA 1859
Query 1859 AAGAAAGCTTCGT---AGTA-T-CTCT---CT--C--CTTTCATTACATACAAAAGTTTG 1906
||||||||||||| |||| | || | || | |||||||||||||||||||||||
Sbjct 1860 AAGAAAGCTTCGTCGTAGTAATGCTGTTATCTATCTACTTTCATTACATACAAAAGTTTG 1919
Query 1907 TTTCTTTCAACTGTAACTGTCTCTGTAT---T---------GCTGTGTACTTTCTC-TTT 1953
|||||||||||||||||||||||||||| | |||||||||||| || |||
Sbjct 1920 TTTCTTTCAACTGTAACTGTCTCTGTATCAATAACAACATTGCTGTGTACTTT-TCCTTT 1978
Query 1954 CAATTTCAAAAGTTTAAGTCGCAT 1977
||||||||||||||||||||||||
Sbjct 1979 CAATTTCAAAAGTTTAAGTCGCAT 2002
> AT1G62200.1 | Symbols: | Major facilitator superfamily protein
| chr1:22982036-22984359 REVERSE LENGTH=1909
Length=1909
Score = 704 bits (381), Expect = 0.0
Identities = 1010/1308 (77%), Gaps = 65/1308 (5%)
Strand=Plus/Plus
Query 191 GCTGAAGATGGTTC-AGTGGAC-TTTAATGGAAACCCACCATTGAAGGAGAAAACAGGAA 248
|||||||||||||| | | ||| ||| ||||||||||||||| |||| |||| |||||||
Sbjct 131 GCTGAAGATGGTTCTA-TTGACATTT-ATGGAAACCCACCATCGAAGAAGAAGACAGGAA 188
Query 249 ACTGGAAAGCTTGTCCTTTTATTCTTGGTAATGAATGTTGTGAGAGGCTAGCTTACTATG 308
|||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||
Sbjct 189 ACTGGAAAGCTTGTCCCTTTATTCTTGGAAACGAATGTTGTGAGAGATTAGCTTACTATG 248
Query 309 GTATTGCTGGGAATCTTATCACTTACCT-CACCACT-AAGCTACATCAAG-GAAATGTGT 365
| ||||| |||||| |||||||| || ||| | | || |||| | || ||||| |
Sbjct 249 GAATTGCCAAGAATCTAATCACTTA-CTACACAAGTGAA-TTACA-CGAGTCCAATGTTT 305
Query 366 CTGCTGCTACAAATGTTACT-ACATGGCAAGGGACTTGTTATCTTACTCCTCTTATTGGA 424
|||| |||| | |||| | | |||||||| ||||| ||| | || ||||| ||||||
Sbjct 306 CTGCAGCTAGTGACGTTA-TGATTTGGCAAGGAACTTGCTATATCACACCTCTCATTGGA 364
Query 425 GCTGTTTTGGCCGATGCTTACTGGGGACGATACTGGACTATTGCTTGTTTCTCCGGGATT 484
|||||| | || ||| ||||||||||| |||||||||| ||||||| |||||| | |||
Sbjct 365 GCTGTTATAGCTGATTCTTACTGGGGAAGATACTGGACCATTGCTTCTTTCTCTGCTATT 424
Query 485 TATTTCATCGGGATGTCGGCGTTAACTCTTTCAGCCTCAGTTCCGGCATTGAAGCCAGCG 544
|||||||| || ||| | ||| || || || || ||| |||||| || |||||||||
Sbjct 425 TATTTCATTGGAATGGCTTTGTTGACACTCTCGGCTTCACTTCCGGTTTTAAAGCCAGCG 484
Query 545 G-A-ATG-T---ATTG--GCGG-TTTTTGTC-CATCAGCAACGCCAGCTCAATATGCGAT 594
| | || | ||| |||| | | || | || ||||||| | | ||| |||||| |
Sbjct 485 GCATGTGCTGGCGTTGCTGCGGCTCTATG-CTCACCAGCAACAACGGTTCAGTATGCGGT 543
Query 595 GTTCTTTGGC-GGGCTTTACCTGATCGCCCTTGGCACTGGAGGTATCAAACCATGCGTCT 653
|||||| | ||||||||||| || || ||||| |||||||||||||||||||| || |
Sbjct 544 TTTCTTT-ACAGGGCTTTACCTTATTGCTCTTGGTACTGGAGGTATCAAACCATGTGTAT 602
Query 654 CATCCTTTGGTGCAGATCAGTTTGATGACACGGACTCGCGTGAACGAGTTAGAAAAGCTT 713
|||| |||||||| |||||||||||||| || ||| || | |||||||||||||||||||
Sbjct 603 CATCTTTTGGTGCTGATCAGTTTGATGATACTGACCCGAGGGAACGAGTTAGAAAAGCTT 662
Query 714 CGTTCTTTAACTGGTTTTACTTCTCCATCAATATTGGAGCACTTGTGTCATCTAGTCTTC 773
| ||||||||||||||||||||||||||||| ||||| || || | ||||| | | ||
Sbjct 663 CTTTCTTTAACTGGTTTTACTTCTCCATCAACATTGGTTCATTTATCTCATCCACT-TTG 721
Query 774 T-AGTTTGGATTCAAGAGAATCG-CGGGTGGGGTTTAGGATT-TGGGATACCAACCGTGT 830
| ||||||| ||||||| ||| | ||||||||| | || || | | || || |||||||
Sbjct 722 TTAGTTTGGGTTCAAGAAAAT-GTCGGGTGGGGACTCGGTTTCTTG-ATTCCCACCGTGT 779
Query 831 TCATGGGACT-TGCCATTGCAAGTTTCTTCTTTGGCACACCGCTTTA-CAGGTTTCAGAA 888
| |||||| | | | ||||| ||||||||| |||| || |||||||| | ||||||||||
Sbjct 780 TTATGGGAGTCT-CTATTGCGAGTTTCTTCATTGGAACTCCGCTTTATC-GGTTTCAGAA 837
Query 889 ACCTGGAGGAAGCCCGATAACTCG-GATTTCCCAAGT-CGTGGTTGCTTCATTCCGGAAA 946
||| ||||| || ||||| ||| | | ||| |||||| | || | ||| ||| ||| |||
Sbjct 838 ACCGGGAGGTAGTCCGATTACTAGAG-TTTGCCAAGTTCTTG-TAGCTGCATACCGTAAA 895
Query 947 TC-AT-CTGTCAAACTCCCTGAAGACCCCACGCTTCTGTATGAAACACAAGACAAGAACT 1004
| | || | || ||||||||||| | | ||||||||||||||| ||| || ||||
Sbjct 896 TTGAAGCT-T-AATCTCCCTGAAGATATCTCATTTCTGTATGAAACACGAGAGAAAAACT 953
Query 1005 C--TGCTATTGCTGGAAGTAGAAAAAT-CGAGTATACCGATGATTGCAAGTATCTTGACA 1061
| || ||||||||||| || || || | | | || || | || ||||| ||||||||
Sbjct 954 CCATG--ATTGCTGGAAGCAGGAAGATTCAAC-ACACTGACGGTTACAAGTTTCTTGACA 1010
Query 1062 AAGCCGCTGTTATCTCAGAAGAAGAATCGAAATCCGGAGATTATTCCAACTCGTGGA-GA 1120
|||| ||||||||||||||| | ||||| |||||||| | || ||||||| | |||| |
Sbjct 1011 AAGCTGCTGTTATCTCAGAATATGAATCTAAATCCGGTGCTTTTTCCAACCCATGGAAG- 1069
Query 1121 CTATGCACGGTTACGCAAGTCGAAGAACTCAAGATTCTGATTCGAATGTTCCCAATCTGG 1180
||||| || || || |||||||||||| | |||| ||| || || ||||| |||||||||
Sbjct 1070 CTATGTACTGTAACTCAAGTCGAAGAAGTTAAGACTCTAATCCGTATGTTTCCAATCTGG 1129
Query 1181 GCTTCCGGTATAATTTTCTCAG-CTGTATACGCACAAATGTCCACAATGTTTGTTCAACA 1239
|| || || || | | ||| | | |||| |||| || ||||| | || || |||||
Sbjct 1130 GCCTCGGGGATCGTCTACTCGGTCC-TATATTCACAGATTTCCACTCTATTCGTGCAACA 1188
Query 1240 AGGCCGAG-CCATGAACTGCAA-AATCGGATCGTTCCAGCTTCCTCCAGCAGCACTAGGG 1297
||| || | |||||||| | || |||| | || ||| || | ||||| || || | |||
Sbjct 1189 AGGACG-GTCCATGAACCG-AATAATCCGTTCTTTCGAGATCCCTCCTGCTTCATTCGGG 1246
Query 1298 ACATTCGACACTGCT-AGCGT-CATCATCTGGGTCCCGCTCTACGACCGGTTCATCATTC 1355
|||||||| || | ||| | |||| | |||| | || ||||| ||| || | |
Sbjct 1247 GTTTTCGACACA-CTTATCGTGC-TCATATCCATCCCAATATATGACCGTTTCCTCGTAC 1304
Query 1356 CCTTAGCAAGACGGTTCACAGGAGTAGAC-AAA-GGATTCACGGAGATACAAAGAATGGG 1413
|||| | ||||||||||||||| | | || ||| || || || || | || |||||||
Sbjct 1305 CCTTTGTAAGACGGTTCACAGG-G-ATACCAAAAGGGTTAACTGATCTGCAGCGAATGGG 1362
Query 1414 AATCGGTCTTTTTGTCTCTGTTCTCTGTATGGCAGCTGCAGCCATTGT 1461
|| ||||||||| ||||||| || | || ||||||||||| |||||
Sbjct 1363 CATTGGTCTTTTTCTCTCTGTCCTAAGCATTGCAGCTGCAGCTATTGT 1410
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97941263295
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5