BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484163
Length=4042
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein | c... 6495 0.0
AT1G14460.1 | Symbols: | AAA-type ATPase family protein | chr1... 1642 0.0
> AT2G02480.1 | Symbols: STI | AAA-type ATPase family protein |
chr2:660743-665635 FORWARD LENGTH=4163
Length=4163
Score = 6495 bits (3517), Expect = 0.0
Identities = 3884/4058 (96%), Gaps = 37/4058 (1%)
Strand=Plus/Plus
Query 1 CTCGCAGTCGCAGGCGACTAAC-AGTTTCAGAACTCGAGATTCATCATCATTCTCTGTTC 59
|||||||||||||||||||| | ||||||||||||||||| | ||||||||||||||||
Sbjct 1 CTCGCAGTCGCAGGCGACTATCAAGTTTCAGAACTCGAGA-T--TCATCATTCTCTGTTC 57
Query 60 CACCGCCGGCGAATG---TATAATCCCTAGACCTTAGTTCCGGCGAACTCTGGAAGTAGA 116
||| |||||| ||| ||||||||||||||||||||||||||||||||| |||| | |
Sbjct 58 CACTTCCGGCG-ATGTATTATAATCCCTAGACCTTAGTTCCGGCGAACTCTCGAAGAACA 116
Query 117 AACAATTTTTGAAATGTCACTGAAAACTCGAAGCTGAGAGA-G-G-AGGAAGAAATCGAA 173
||||| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct 117 AACAAGTTTTGAAATGTCAGTGAAAACGCGAAGCTGAGAGAGGAGAAGGAAGAAATCGAA 176
Query 174 GGAAGCTGATTCAAATTT-TG--GAAG-AAAAATGTCAGGTTCGAGAGTTTCGGATCTGA 229
|||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||
Sbjct 177 GGAAGCTGATTCAAATTTAGGAAGAAGAAAAAATGTCAGGTTCGAGAGTTTCGGATCTGA 236
Query 230 GTAAATTGCATCTGAAGAAGGAGCTTACTCAAATCAGAAAAGCTGGCCGTGTTTTACGCG 289
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 237 GTAAATTGCATCTGAAGAAGGAGCTGACTCAAATCAGAAAAGCTGGCCGTGTTTTACGCG 296
Query 290 ATCCAGGCACTACTTCCTCGTGGAAATCTCCTCTCGATTCGTCAAGATCCGTCGCGGTTT 349
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 297 ATCCAGGTACTACTTCCTCCTGGAAATCTCCTCTCGATTCGTCAAGATCCGTCGCGCTTT 356
Query 350 TCGAGACTCCGGCGAGTAGAAACGGTGGGAGTTCGAGTCAGTTTCCGATTCGAGGAGAGA 409
| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 357 TGGAGACTCCGGCGAGCAGAAACGGTGGCAGTTCGAGTCAGTTTCCGATTCGAGGAGAGA 416
Query 410 GTAGTACTAA---TCGTGGGAAAGAGAAGAAGGTGTTCTTGTATAACTGGAAGACTCAGA 466
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 417 GTAGTACTAATCGTCGTGGGAAAGAGAAGAAGGTGTTTTTGTATAACTGGAAGACTCAGA 476
Query 467 AATCTTCTAGTGAGAAAAGTGGGTTAGCTAAGAATGGTAAGgaagaagaagaagaagaag 526
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||
Sbjct 477 AATCTTCTAGTGAGAAAAGTGGATTAGCTAAGAATGGTAAGGAAGAAG-AG--GAAGAAG 533
Query 527 aagaagaTGCTTCTTCGTGGACTCAAGCTAGTGTTAATGATGATGATGATGTGAGTGACG 586
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 534 AAGAAGATGCTTCTTCGTGGACGCAAGCTAGTGTTAATGATGATGATGATGTGAGTGATG 593
Query 587 CGAGGAATGGTGGTGATTCCAAGAGTGATTCATATCTTGGAGATATCCAATCAGCTTCGA 646
|||||||||||||||||| | || | || || |||| || |||||||||||||
Sbjct 594 CGAGGAATGGTGGTGATT-C----GT-A-TCGTA-----GAGAAATACAATCAGCTTCGA 641
Query 647 TGGGTTTTAGGTGTAGAGATACGAATCTAGCGTCACAAGGTGTGTCAAAGATGAGAAAGA 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 642 TGGGTTTTAGGTGTAGAGATACGAATCTAGCGTCACAAGGTGTGTCAAAGATGAGGAAGA 701
Query 707 GTAATGTTGGTAGTTGTAAGAAGAAGAGTAAGCAAAAAATTAGCTCGTCTCGTTTGGATT 766
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 702 GTAATGTTGGTAGTTGTAAGAAGAAGAGTAAGAAAAAAATTAGCTCTTCTCGTTTGGATT 761
Query 767 TTTTGTCAAAGTACCAACCTAGAGAAGATATTGTTGCTAGAAACTGTAATGCTGGATCAG 826
|||||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||
Sbjct 762 GTTTGTCAAAGTATCAACCTAGAGATGACATTGTTGCTAGAAATTGTAATGCTGGATCAG 821
Query 827 ATGATACAGAGGAGGAATTGAGTAATTCAGAGGATTTTAGGAAGGTTACTGGTGCATCTC 886
|||| |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 822 ATGACACAGAGGAGGAATTGAGTAATTCAGAGGATTTGAGGAAGGTCACTGGTGCGTCTC 881
Query 887 CTTTGCTTAAGAAGCTGAAGCAGAAGAACTGGTCACGTTCTTCATCAAAATTGTTGAGAG 946
|||||||| |||||| |||||||||||||||||||||||||| |||| |||||||||||
Sbjct 882 CTTTGCTTTTGAAGCTTAAGCAGAAGAACTGGTCACGTTCTTCGTCAAGATTGTTGAGAG 941
Query 947 CTAATAATAGAAAAGAGGATTCTTCATGTACGTATAATAGTACACCGGCTTTATCCACTA 1006
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 942 CTAATAATAGAAAAGAGGATTCTTCATGTACTTATAATAGTACACCGGCTTTATCCACTA 1001
Query 1007 GCTCGTATAATATGTATGCTGTTCGTAATCCAAGCACTGTTGGATCTTGGGATGGTACCA 1066
| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1002 GTTCGTACAATATGTATGCTGTTCGTAATCCCAGCACTGTTGGATCTTGGGATGGTACCA 1061
Query 1067 CGACTTCGCTGAATGATGGTGATGATGAGTTGGATGATAACTTGGATTTACCAGGGAGGC 1126
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1062 CGACTTCGGTGAATGATGGTGATGATGAGTTGGATGATAACTTGGATTTACCAGGGAGGC 1121
Query 1127 AAGGTTGTGGCATTCCGTGTTATTGGACGAAGAAGGCGATGAAACATAGAGGTGGATGCA 1186
|||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1122 AAGGATGTGGTATTCCGTGTTATTGGACGAAGAAGGCGATGAAACATAGAGGCGGATGCA 1181
Query 1187 GAAGTTGTTGTTCTCCATCGTTTTCGGATACTTTGAGAAGAACCGGAAGTAGCATTTTGT 1246
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 GAAGTTGTTGCTCTCCATCGTTTTCGGATACTTTGAGAAGAACCGGAAGTAGCATTTTGT 1241
Query 1247 GTGGGAGTCAATCTGTGTATCGTAGACATAATAGACATTCTTCTGGAGGGTATATTAAAC 1306
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1242 GTGGGAGTCAATCTGTGTATCGTAGACATAATAGACATTCTTCTGGAGGGTATAGTAAAC 1301
Query 1307 AAAAAATTGCTTGTAGAAGTGCACAAGGTGTTTTACCTTTACTCACATATGGTGGTGATG 1366
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1302 AAAAAATTGCTTGTAGAAGTGCACAAGGTGTTTTACCTTTACTCAGTTACGGTGGTGATG 1361
Query 1367 GTAGAGGAGGGTCTTCTTTAGGAACCGGGCTTAGTGATGACGAGCTTTCCACCAATTACG 1426
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 1362 GTAGAGGAGGGTCTTCTTTAGGAACCGGGCTTAGTGATGATGAGCTTTCTACCAATTATG 1421
Query 1427 GAGAGCTTGATTTAGAGGCTCAGAGTAGATTAGATGGGAGGAGGTGGTCTACTAGTTATA 1486
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1422 GAGAGCTTGATTTAGAGGCTCAGAGTAGATTAGACGGGAGGAGGTGGTCTACTAGTTATA 1481
Query 1487 GGAGTCAAGATGGTTTGGAGGCTGTAGCGTTAGATGGAGAAGGAGAAGACGGAAGTACAC 1546
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1482 GGAGTCAAGATGGTTTGGAGGCTGTAGCGTTAGATGGAGAAGAAGAAGAAGGAAGTACAC 1541
Query 1547 CGGAAACAATCCGAAGTTTCAGCCAAAAGTACAGACCAATGTTTTTTGAGGAATTGATTG 1606
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1542 CGGAAACAATCCGAAGCTTCAGCCAAAAGTACAGACCAATGTTTTTTGAGGAATTGATTG 1601
Query 1607 GACAGAGTATAGTGGTTCAATCGTTAATGAACGCTGTAAAAAGGAGTAGGATCGCTCCTG 1666
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1602 GACAAAGTATAGTGGTTCAATCGTTAATGAACGCTGTTAAAAGGAGTAGGATCGCTCCTG 1661
Query 1667 TTTATCTTTTCCAGGGTCCTAGAGGAACTGGTAAAACATCAACCGCAAGAATTTTTTCAG 1726
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1662 TTTATCTTTTCCAGGGTCCTAGAGGAACTGGTAAAACATCAACCGCAAGGATTTTTTCAG 1721
Query 1727 CCGCCCTAAATTGTGTGGCCACTGAAGAAATGAAGCCTTGTGGGTACTGTAAAGAGTGCA 1786
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1722 CCGCCCTGAATTGTGTGGCCACTGAAGAAATGAAGCCTTGTGGGTACTGTAAAGAGTGCA 1781
Query 1787 ATGAGTTCATGTCTGGGAAAAGTAAGGATTTTTGGGAACTTGATGGAGCTAATAAGAAGG 1846
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1782 ATGATTTCATGTCTGGGAAAAGTAAGGATTTTTGGGAACTTGATGGAGCTAATAAGAAGG 1841
Query 1847 GAGCTGATAAGGTTAGGTACCTTTTAAAAAACCTACCGACGATACTTCCACGGAATTCCT 1906
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1842 GAGCTGATAAGGTTAGGTACCTTTTAAAAAACCTACCGACGATACTTCCACGAAATTCCT 1901
Query 1907 CAATGTACAAGGTTTTTGTGATAGACGAGTGTCATTTGCTGCCATTGAAGACTTGGCTGT 1966
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 1902 CAATGTACAAGGTTTTTGTGATAGACGAGTGTCATTTGCTGCCATCGAAGACGTGGCTGT 1961
Query 1967 CTTTTCTTAAGTTTCTTGAGAACCCTCTGCAGAAAGTTGTCTTCATATTTATAACAACTG 2026
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1962 CTTTTCTTAAGTTTCTTGAAAACCCTCTGCAGAAAGTTGTCTTCATATTTATAACTACTG 2021
Query 2027 ACCTTGAAAATGTTCCTCGGACCATTCAGTCAAGGTGCCAGAAGTTCCTCTTTGATAAAC 2086
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 2022 ACCTTGAAAATGTTCCCCGGACCATTCAGTCAAGGTGCCAGAAGTTTCTCTTTGACAAAC 2081
Query 2087 TCAAAGATTCTGACATAGTAGTGAGACTAAAGAAAATTGCTTCAGATGAAAATCTAGATG 2146
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 2082 TCAAAGATTCTGACATAGTAGTGAGACTAAAGAAAATTGCTTCAGACGAAAATCTTGATG 2141
Query 2147 TAGACTTGCATGCGTTGGACCTGATTGCTATGAACGCAGATGGCTCACTTCGAGATGCTG 2206
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2142 TAGACTTGCATGCGTTGGACCTGATTGCTATGAACGCGGATGGCTCACTTCGAGATGCTG 2201
Query 2207 AAACTATGTTGGAGCAGCTGAGTTTGCTGGGAAAACGCATCACCACTGCTCTAGTAAACG 2266
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 2202 AAACTATGTTGGAGCAGCTGAGTTTGCTGGGAAAACGCATCACCACAGCTTTAGTAAACG 2261
Query 2267 AGCTAGTGGGTGTTGTTTCAGATGAAAAATTGTTGGAACTCTTGGAATTAGCATTGTCTT 2326
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2262 AGCTAGTTGGTGTTGTTTCAGATGAAAAATTGTTGGAACTCTTGGAATTAGCATTGTCTT 2321
Query 2327 CTGACACGGCAGAGACCGTGAAGCGAGCTAGAGAGTTGTTGGACCTTGGAGCTGACCCAA 2386
||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2322 CTGACACAGCAGAGACTGTTAAGCGAGCTAGAGAGTTGTTGGACCTTGGAGCTGACCCAA 2381
Query 2387 TAGTCTTGATGTCTCAACTCGCCAGTCTTATCATGGATATCATTGCTGGTACATACAAGG 2446
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2382 TAGTCTTGATGTCTCAACTCGCCAGTCTTATTATGGATATCATTGCTGGTACATACAAGG 2441
Query 2447 TCGTAGATGAAAAATACAGCAACGCCTTCCTTGACGGAAGAAACTTGACTGAAGCAGATA 2506
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2442 TCGTAGATGAAAAATACAGCAACGCCTTCTTTGACGGAAGAAACTTGACTGAAGCAGATA 2501
Query 2507 TGGAGGGATTAAAGCATGCTTTGAAACTTCTTTCTGAGGCTGAGAAGCAGCTTAGAGTTT 2566
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2502 TGGAGGGATTAAAGCATGCTTTGAAACTTCTTTCTGAGGCTGAGAAGCAGCTGAGAGTTT 2561
Query 2567 CTAATGACCGTTCAACATGGTTCACAGCGACTTTGCTTCAGCTTGGGTCAATGCCATCTC 2626
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2562 CTAATGACCGTTCAACATGGTTCACAGCGACTTTGCTTCAGCTTGGGTCAATGCCTTCTC 2621
Query 2627 CTGGCACCACACATACAGGAAGTAGTAGAAGGCAAAGCTCTAGAGCAACTGACGATGACC 2686
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2622 CTGGCACCACACATACAGGCAGTAGTAGAAGGCAAAGCTCTAGAGCAACTGACGATGACC 2681
Query 2687 C-GTCAAGCATTTCAAGGGAAGTGATGGCTTACAAACAGAGAATAGGAGGGCTTCACTTT 2745
| | ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2682 CAG-CAAGCGTTTCAAGGGAAGTGATGGCTTACAAACAGAGAATAGGAGGACTTCACTTT 2740
Query 2746 AGTAAGTTAGCATCCCCAGCTTCGGTTATAAAAAGGAACGGGAATCATTCCCATGAAGCG 2805
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2741 AGTAAGTCGGCATCTCCAGCTTCGGTTATAAAAAGGAACGGGAATCATTCCCATGAAGCG 2800
Query 2806 AAAGCATTCTCCAGGGTTATCGATAATAACTGCTATAAATCCTCCTCATCTAGCCAAGTT 2865
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2801 AAACCATTCTCCAGGGTTATCGATAATAACTGCTATAAATCCTCCTCATCTAGCCAAATG 2860
Query 2866 ATAGAGAGCGAAGCTTCCATTGCCTCGCATGAAAATAGCGTCGCAAGCACCATGATGCTT 2925
||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 2861 ATAGAGAGCGAAGGTTCCATTGCCTCACATGAAAATAGCATCGCAAGCACCATGATGCTT 2920
Query 2926 AATCAAAGAAGTTCAGAGAAACTTAACGATATATGGAGAAAATGTATTGAAAGATGTCAC 2985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2921 AATCAAAGAAGTTCAGAGAAACTTAACGATATATGGAGAAAATGTATTGAAAGATGTCAC 2980
Query 2986 TCCAAGACACTGAGGCAGCTGCTCTATACTCATGGGAAACTTATATCTATCAGTGAAGTT 3045
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2981 TCAAAGACACTGAGGCAGCTGCTCTATACTCATGGGAAACTTATATCTATCAGTGAAGTT 3040
Query 3046 GAAGGTATACTAGTTGCTTATATCGCGTTTGGAG-AAACTGATATCAAATTGAGAGCTGA 3104
|| ||||| || |||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct 3041 GAGGGTATTCTCGTTGCTTATATCGCGTTTGGAGAAAAC-GATATCAAACTGAGAGCTGA 3099
Query 3105 AAGGTTTCTAAGCAGTATCACAAACTCGATCGAAATGGTACTAAGGCGAAGCGTAGAGGT 3164
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3100 AAGGTTTCTAAGCAGTATCACAAACTCGATTGAAATGGTACTAAGGCGAAGCGTAGAGGT 3159
Query 3165 CAGGATAATCCTCTTGCCTGAAACCGAGTTACTCGTCGTCCCTCACCAAACCCGGAAACC 3224
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3160 CAGGATAATTCTCTTGCCTGAAACCGAGTTACTCGTTGTCCCTCACCAAACCCGGAAACC 3219
Query 3225 CGAAATGACCAACAAAAGTGGGCATCTAAATACCATCACTGGTTTAAATGCTGAATCAGA 3284
||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| ||||
Sbjct 3220 AGAAATGACCAACAAAAGTGGGCATCTAAATAACATCGCTGGTTTAAATGCCGAAACAGA 3279
Query 3285 TGTTGAAGTTGGTAGCAGCGAGGAAAGCAGATCAAAACTCCCAATGCAAAGGATAGAATC 3344
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 3280 TGTTGAAGTTGGTAGCAGCGTGGAAAGCAGATCAAAACTCCCGATGCAAAGGATAGAATC 3339
Query 3345 GATCATCCGAGAACAAAGATTAGAAACCGCGTGGTTACAAACCGCTGATAAAGACACACC 3404
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3340 AATCATCAGAGAACAAAGATTAGAAACCGCTTGGTTACAAACCGCTGATAAAGACACACC 3399
Query 3405 TGGATCGATAATACGGGTAAAACCCGAAAGAAATCAAATTCTACCTCAAGAAGACACTTA 3464
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 3400 TGGATCGATAATACGGGTAAAACCCGAAAGGAATCAGATTCTACCTCAAGAAGACACTTA 3459
Query 3465 TCGCCAACCTAACGTAGCTTCTGCTATTTCTTCTTCTGGACTAACCACTCACCATTGGGT 3524
||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 3460 TCGCCAAACTAACGTAGCTTCTGCTATTTCTTCTTCTGGCCTAACCACTCACCAATGGGT 3519
Query 3525 AGATGAGTTAAACAATGAAGTTAAGCTTCTGAAAATCGGCGACAATGGTGAGCTTCAGGA 3584
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3520 AGATGAGCTAAACAATGAAGTTAAGCTTTTGAAAATCGGCGACAATGGTGAGCTTCAGGA 3579
Query 3585 GAATCTAACTGGTACAAGAGGACAGCATTGTCCTCTTTCCCCAAGCTTACTTCATGATAC 3644
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3580 GAATCTAACCGGTACAAGAGGACAGCATTGTCCTCTTTCCCCAAGCTTACTTCATGATAC 3639
Query 3645 TAACTTCGGAAACAACAAAGACAATCTAGGAGGATACGAATCAGGATCAGGAAGAGTTGG 3704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3640 TAACTTCGGAAACAACAAAGACAATCTAGGAGGATACGAATCAGGATCAGGAAGAGTTGG 3699
Query 3705 TTGTAATATATTATTTTGTTGGAAGACAAAAAAGACTCAGAGACGAAGCAAGTCGAAACA 3764
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3700 TTGTAATATATTATTTTGTTGGAACACAAAAAAGACTCAGAGACGAAGCAAGTCGAAACA 3759
Query 3765 GGTTAAAGGAACTCCTGTTCGTTCCCGGAGAAATCGGAAGAGCCGATTCTCTCTGTTTAA 3824
||| || ||||||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct 3760 GGTCAAGGGAACTCCTGTTCGTTCGCGGAGAAATCGGAAGAGTCGGTTCTCTCTGTTTAA 3819
Query 3825 TGGATGTGCTAAGCCAAGGAAAGCAGAAGGTAACATTAGAAGATGAAACTAAGTTCTTAA 3884
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3820 TGGATGTGCTAAGCCAAGGAAAGCAGAAGGTAACATTAGAAGATGAAACTAAGTTCTTTA 3879
Query 3885 GTCATGAAAAACAAAATTGTTCCCTCAAGCTCTAATTTATCATATGTTCTTCCACTTCCA 3944
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3880 GTCATGAAAAACAAAATTGTTCCCTCAAGCTCTAATTTATCATCTGTTCTTCCACTTCCA 3939
Query 3945 CATAGTTTTTCCTTAATTCTGTTTGATAATGATATGTCAAAGGACAGTTTTAATTTATTC 4004
||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 3940 CATAGTTTTCCCTTAATTATGTTTGATAATGATATGTCAAAGGACAGTTTTAATATATTC 3999
Query 4005 ACTGTAAAGTTCTTATCCATTTTTGTTATCTATCTTAT 4042
|||||||||||| |||||||||||||||||||||||||
Sbjct 4000 ACTGTAAAGTTCCTATCCATTTTTGTTATCTATCTTAT 4037
> AT1G14460.1 | Symbols: | AAA-type ATPase family protein | chr1:4948748-4952927
REVERSE LENGTH=3742
Length=3742
Score = 1642 bits (889), Expect = 0.0
Identities = 1593/1919 (83%), Gaps = 104/1919 (5%)
Strand=Plus/Plus
Query 881 CATCTCCTTTGCTTAAGAAGCTGAAGCAG-AAGAACTGGTCACGTTCTTCATCAAAATTG 939
|||||||||||||| ||| || |||| | |||||||||||||||||||| || || ||
Sbjct 797 CATCTCCTTTGCTTTTGAAACTAAAGC-GCAAGAACTGGTCACGTTCTTCTTCTAAGTTC 855
Query 940 TTGAGAGCTAATAAT-AGAAAAGAGGATTCTTCAT-GTACGTATAATAGTACACCGGCTT 997
|||||| || || | || | |||||||||||| | ||| | ||| |||||||| || |
Sbjct 856 CTGAGAGGTACTAGTAAG-AGAGAGGATTCTTC-TCATACTTGTAACAGTACACCTGCAT 913
Query 998 TATCCACTAGCTCGTATAATATGTATGCTGTTCGTAATCCAAGCACTGTTGGATCTTGGG 1057
| || |||||||| ||||||||||||| | | |||||||| |||||||||||||||||||
Sbjct 914 TGTCGACTAGCTCATATAATATGTATGGTATCCGTAATCCTAGCACTGTTGGATCTTGGG 973
Query 1058 ATGGTACCACGACTTCGCTGAATGATGGTGATGATGAGTTGGATGATAACTTGGA-TTTA 1116
| | || | | | ||||| ||| | || | | |||||||||||||| ||||
Sbjct 974 A--G------GA--T-G--G--TGATGATGA-GTTG-GAT-GATGATAACTTGGATTTTA 1015
Query 1117 CCAGGGAGGCAAGGTTGTGGCATTCCGTGTTATTGGACGAAGAAGGCGA--TGAAACATA 1174
|||||| ||||||||||| ||||| | ||||||||| ||| ||| | |||||||||
Sbjct 1016 -AAGGGAGACAAGGTTGTGGGATTCCTTTTTATTGGACTAAG-AGG-AATCTGAAACATA 1072
Query 1175 GAGGTGGATGCAGAAGTTGTTGTTCTCCATCGTTTTCGGATACT-TTGA-GAAGAACCGG 1232
|||||||||| || |||||||| ||||| ||||||||||||||| || | || ||| ||
Sbjct 1073 GAGGTGGATGTAGGAGTTGTTGCTCTCCTTCGTTTTCGGATACTCTT-AGGAGGAA-AGG 1130
Query 1233 AAGTAGCATTTTGTGTGGGAGTCAATCTGTGTATCGTAGACATAATAGACATTCTTCT-G 1291
|||||||||||| |||||||||||||||||||||||||||| |||| ||||| ||| |
Sbjct 1131 AAGTAGCATTTTATGTGGGAGTCAATCTGTGTATCGTAGAC---ATAGGCATTCCTCTGG 1187
Query 1292 GAGGGTATATTAAACAAAAAATTGCTTGT-AGAAGTGCACAAGGTGTTTTACCTTTACTC 1350
|| ||| || |||||| || |||||| | ||||||||| |||||||||||||||| |||
Sbjct 1188 GA-GGTTTAATAAACAGAAGCTTGCTT-TAAGAAGTGCAAAAGGTGTTTTACCTTTGCTC 1245
Query 1351 ACATATGGTGGTGATGGTAGAGGAGGGTCTTCTTTAGGAACCGGGCT-TAGTGATGACGA 1409
| ||||||||||||| ||||||||||||| ||| |||||| ||| | ||||||||| ||
Sbjct 1246 AAATATGGTGGTGATAGTAGAGGAGGGTCATCTATAGGAATTGGG-TATAGTGATGATGA 1304
Query 1410 GCTTTCCACCAATTACGGAGAGCTTGATTTAGAGGCTCAGAGTAGATTAGATGGGAGGAG 1469
||||| || ||| |||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1305 TCTTTCTACTGATTTTGGAGAGATTGATTTAGAAGCTCAGAGTAGATTAGATGGGAGGAG 1364
Query 1470 GTGGTCTACTAGTTATAGGAGTCAAGATGGTTTGGAGGCTGTAGCGTTAGATGGAGAAGG 1529
||||||| | ||| || |||||| ||||| | | | | | | ||| | ||| |
Sbjct 1365 ATGGTCTAGTTGTTGTAAGAGTCAGGATGG--AGAAAG-AG-A-AG-AAGA--G-GAA-G 1414
Query 1530 AGAAGACGGAAGTACACCGGAAA-CAATCCGAAGTTTCAGCCAAAAGTAC-AGACCAATG 1587
| | || |||||||||||||||| | || | || || |||||||||||| || ||||||
Sbjct 1415 A-AGGA-GGAAGTACACCGGAAAGTATTCAG-AGCTTGAGCCAAAAGTACAAG-CCAATG 1470
Query 1588 TTTTTTGAGGAATTGATTGGACAGAGTATAGTGGTTCAATCGTTAATGAACGCTGT-AAA 1646
|| ||||| ||| ||||||| ||||||||||| |||||||| ||||||||||||| ||
Sbjct 1471 TTCTTTGATGAACTGATTGGGCAGAGTATAGTTGTTCAATCACTAATGAACGCTGTGAAG 1530
Query 1647 AAGGAGTAGGATCGCTCCTGTTTATCTTTTCCAGGGTCCTAGAGGAACTGGTAAAACATC 1706
|||| ||||| | |||| ||||||||||||||| ||||||||||| ||||| || |||||
Sbjct 1531 AAGG-GTAGGGTTGCTCATGTTTATCTTTTCCAAGGTCCTAGAGGTACTGGGAAGACATC 1589
Query 1707 AACCGCAAGAATTTTTTCAGCCGCCCT-AAAT-TG-TGTGGCCACTGAAGAAATGAAGCC 1763
||||| |||||| |||| |||||| | || | || ||||| ||||||||||||||| ||
Sbjct 1590 TACCGCGAGAATTCTTTCGGCCGCCTTGAATTGTGATGTGGTCACTGAAGAAATGAAACC 1649
Query 1764 TTGTGGGTACTGTAAAGAGTGCAATGAGTT-CATGTCT-GGGAAAAGTAAGGATTT-TTG 1820
|||||||||||| ||||| || | ||| || |||| || |||||||||| |||||| ||
Sbjct 1650 TTGTGGGTACTGCAAAGAATGTAGTGA-TTACATG-CTAGGGAAAAGTAGGGATTTATT- 1706
Query 1821 GGAACTTGATGGAGCTAATAAGAAGGGAGCTGATAAGGTTAGGTACCTTTT-AAAAAACC 1879
||||||||||| | ||| ||||| ||||| || || |||||||||||||| ||||||
Sbjct 1707 GGAACTTGATGCTGGTAAGAAGAATGGAGCCGAGAAAGTTAGGTACCTTTTGAAAAAA-T 1765
Query 1880 TACCGACGA-TA-CTTCCACGGAATTCCTCAATG-TACAAGGTTTTTGTGATAGACGAGT 1936
| ||| | || | ||| | || || ||||| | |||||||||||||| ||||| ||||
Sbjct 1766 TGTTGAC-ATTAGC-TCCTCAGAGTT-CTCAAAGATACAAGGTTTTTGTTATAGATGAGT 1822
Query 1937 GTCATTTGCTGCCAT-TGAAGACTTGGCTGTCTTTTCTTAAGTTTCTTGAGAACCCTCTG 1995
||||||| | |||| | | ||||||||| ||||| || |||||||||||||||||||||
Sbjct 1823 GTCATTTATTACCATCT-AGGACTTGGCTATCTTTACTCAAGTTTCTTGAGAACCCTCTG 1881
Query 1996 CAGAAAGTTGTCTTCATATTTATAACAACTGACCTTGAAAATGTTCCTCGGACCATTCAG 2055
|||||| ||||||| ||| ||| || ||||||||||| |||||||||||||||||||||
Sbjct 1882 CAGAAATTTGTCTTTGTATGTATCACGACTGACCTTGACAATGTTCCTCGGACCATTCAG 1941
Query 2056 TCAAGGTGCCAGAAGTTCCTCTTTGATAAACTCAAAGATTCTGACATAGTAGTGAGACTA 2115
|||||||||||||||| | |||| | ||| ||| |||| |||||| || |||||||||
Sbjct 1942 TCAAGGTGCCAGAAGTACATCTTCAACAAAGTCAGAGATGGTGACATTGTTGTGAGACTA 2001
Query 2116 AAGAAAATTGCTTCAGATGAAAATCTAGATGTAGACTTGCATGCGTTGGACCTGATTGCT 2175
| ||| |||||||||||||||||||||||||| || | || ||||||||||||||||||
Sbjct 2002 AGGAAGATTGCTTCAGATGAAAATCTAGATGTGGAATCACAGGCGTTGGACCTGATTGCT 2061
Query 2176 ATGAACGCAGATGGCTCACTTCGAGATGCTGAAACTATGTTGGAGCAGCTGAGTTTGCTG 2235
|||| || |||||||| ||||||||||||||||| ||||| |||||| |||||||| ||
Sbjct 2062 TTGAATGCTGATGGCTCGCTTCGAGATGCTGAAACCATGTTAGAGCAGTTGAGTTTGATG 2121
Query 2236 GGAAAACGCATCACCACTGCTCTAGTAAACGAGCTAGTGGGTGTTGTTTCAGATGAAAAA 2295
|||||||| |||||| || ||| ||||| ||||| || ||||||||||||||||| |||
Sbjct 2122 GGAAAACGAATCACCGTTGATCTTGTAAATGAGCTTGTTGGTGTTGTTTCAGATGATAAA 2181
Query 2296 TTG-TTGGAACTCTTGGAATTAGCATTGTCTTCTGACACGGCAGAGACCGTGAAGCGAGC 2354
||| || ||||||||||||||||| |||||||||||||||||||||||||| ||| |||
Sbjct 2182 TTGCTT-GAACTCTTGGAATTAGCGTTGTCTTCTGACACGGCAGAGACCGTTAAGAAAGC 2240
Query 2355 TAGAGAGTTGTTGGACCTT-GGAGCTGACCCAATAGTCTTGATGTCTCAACTCGCCAGTC 2413
||||||||| |||| ||| |||||||| |||||| || ||||||||||||| |||||||
Sbjct 2241 TAGAGAGTTACTGGA-CTTGGGAGCTGATCCAATACTCATGATGTCTCAACTAGCCAGTC 2299
Query 2414 TTATCATGGATATCATTGCTGGTA-CATACAAGGTC-GTAGATGAAAAATACAGC-AACG 2470
|||||||||||||||||||||| | ||||||||| | | || |||||||||||| || |
Sbjct 2300 TTATCATGGATATCATTGCTGG-AGCATACAAGG-CTTTGGACGAAAAATACAGCGAA-G 2356
Query 2471 CCTTCCTTGACGGAAGAAACTTGACTGAAGCAGATATGGAGGGATTAAAGCATGCTTTGA 2530
|||| ||||| |||| |||||||||||||| ||| ||||| || |||||||||||||||
Sbjct 2357 CCTTTCTTGATAGAAGGAACTTGACTGAAGCGGATTTGGAGAGACTAAAGCATGCTTTGA 2416
Query 2531 AACTTCTTTCTGAGGCTGAGAAGCAGCTTAGAGTTTCTAATGACCGTTCAACATGGTTCA 2590
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 2417 AACTTCTTTCTGAGGCTGAGAAGCAGCTTAGAGTTTCTACTGATCGTTCAACATGGTTCA 2476
Query 2591 CAGCGACTTTGCTTCAGCTTGGGTCAATGCCATCTCCTGGCACCACACATACAGGAAGTA 2650
||| || |||||||||||||| |||||||| |||||||| ||||||||||| || || |
Sbjct 2477 TAGCTACCTTGCTTCAGCTTGGTTCAATGCCTTCTCCTGGAACCACACATACCGGTAGCA 2536
Query 2651 GTAGAAGGCAAAGCTCTAGAGCAACTGACGATGACCCGTCAAGCATTTCAAGGGAAGTGA 2710
|||||||||||||||||||||||||||| | || |||||||||||| ||||| |
Sbjct 2537 GTAGAAGGCAAAGCTCTAGAGCAACTGA--A-GA------AAGCATTTCAAGAGAAGTTA 2587
Query 2711 TGGCTTACAAACAGAGAATAGGAGGGCTTCACTTTAGTAAGTT-AGCATCCCCAGCTTC 2768
| ||||||||||||||| | ||| ||||| | |||||| | ||| |||||| ||||
Sbjct 2588 TTGCTTACAAACAGAGA-TC--AGGCCTTCAATGTAGTAA-TACAGCCTCCCCAACTTC 2642
Score = 122 bits (66), Expect = 2e-26
Identities = 128/156 (82%), Gaps = 11/156 (7%)
Strand=Plus/Plus
Query 195 AAGAAAAATGTCAGGTTCGA-GAGTTTCGGATCTGAGTAAATTGCATCTGAAGAAGGAGC 253
|||||||||||| |||| | || ||||||||| ||| ||||||||||||||||||||||
Sbjct 171 AAGAAAAATGTCGGGTTTAAGGA-TTTCGGATCCGAGCAAATTGCATCTGAAGAAGGAGC 229
Query 254 TTACTCAAATCAGAAAAGCTGGC--CGT---GTTTTACGCGATCCAGGCACTACTTCCTC 308
||||||| ||||| |||| || | | | | |||||||||||| || || ||||||||
Sbjct 230 TTACTCATATCAGGAAAGTTG-CTTC-TAAAGGTTTACGCGATCCTGGAACCACTTCCTC 287
Query 309 GTGGAAATCTCCTCTCGA-TTCGTCAAGATCCGTCG 343
|||||||||||||| | ||| || |||| |||||
Sbjct 288 ATGGAAATCTCCTCTT-ACTTCCTCGAGATTCGTCG 322
Score = 71.3 bits (38), Expect = 7e-11
Identities = 40/41 (98%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 565 GATGATGATGATGTGAGTGACGCGAGGAATGGTGGTGATTC 605
||||||||||||||||||||||||||||||||||| |||||
Sbjct 535 GATGATGATGATGTGAGTGACGCGAGGAATGGTGGAGATTC 575
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 201420276145
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5