BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484177
Length=1718
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02720.1 | Symbols: | Pectate lyase family protein | chr2:7... 2556 0.0
AT1G14420.1 | Symbols: AT59 | Pectate lyase family protein | ch... 732 0.0
AT2G02730.1 | Symbols: | Protein of unknown function (DUF1664)... 553 2e-156
AT4G13210.2 | Symbols: | Pectin lyase-like superfamily protein... 93.5 6e-18
> AT2G02720.1 | Symbols: | Pectate lyase family protein | chr2:763011-765027
FORWARD LENGTH=1723
Length=1723
Score = 2556 bits (1384), Expect = 0.0
Identities = 1617/1726 (94%), Gaps = 30/1726 (2%)
Strand=Plus/Plus
Query 1 AAGTTCCTTGTTATTTAAGAAAGCCATGAATCCGATTATCTATTTCTAACCCTGGGCCGA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAGTTCCTTGTTATTTAAGAAAGCCATGAATCCGATTATCTATTTCTAACCCTGGGCCGA 60
Query 61 CCAGAAAAC-TTTTGGACGACCCAAATTTCAAGGGTTCTAATAAATTCTTCACCGGAAAA 119
||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 61 CCAGAAAACTTTTTGGACGACCCAAACTTCAAGGGTTCTAATAAATTCATCACCGGAAAA 120
Query 120 A-ATATTTAT-AAATAAAAATCTCTCACCACCGCCGATTCAAATGTTGAATCTTGGGAGC 177
| ||| ||| |||||||||||||||||||| || |||||||||| ||||||||||||||
Sbjct 121 AGATACATATAAAATAAAAATCTCTCACCACTGCTGATTCAAATGGTGAATCTTGGGAGC 180
Query 178 TACGTTTTCGTCTTTGTCTCGTTGTCTCTCACCGTGGTAGTTCCATCGGTTCAAGCCCAC 237
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 181 TACGTTTTCGTCTTTGTCGCGTTGTCTCTCACCGTGGTGGTTCCATCGGTTCAAGCCCAC 240
Query 238 ATCGCCGTATATGATGACTACTGGACGCAGCGTCAAACCATCGCATTGCGACAAACTTTG 297
||||||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||||
Sbjct 241 ATCGCCGAATATGATGAATACTGGACGCAGCGTCAAACCAACGCATTGCGAGAAACTTTG 300
Query 298 GAATCATATGACCCGAACCCAGATAACGTCACAGACCACTTCAACTACCATGCCGCCTTA 357
||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct 301 GAATCTTATGACCCGAACCCAGAGAACGTCACGGACCACTTTAACTACCATGCCGCCTTA 360
Query 358 GCCATGGAGACTACAGGGATAGTCAACGAAACAAGGAGGGATCTCCGTCAGGTCAGAAGC 417
|| |||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 361 GCTATGGAGACGACAGGGATAGTAAACGAAACAAGGAGGGATCTCCGTCAGGTCGGACGC 420
Query 418 GGTAAGAAAA-AACCTAGACGTGGCGGAAGGTTCGAATCCCTTAATGCGATCGATAAATG 476
|||||||||| || |||||||||| |||||||| |||||||| || ||||||||||||||
Sbjct 421 GGTAAGAAAACAA-CTAGACGTGGAGGAAGGTTTGAATCCCTAAACGCGATCGATAAATG 479
Query 477 CTGGCGAGGCGACAAAAACTGGGACAAAAACCGGAAAAAACTAGCAGATTGCGTCCTTGG 536
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct 480 CTGGCGAGGCGACAAAAACTGGGACAAAAACAGGAAAAAACTAGCAGATTGTGTCCTCGG 539
Query 537 ATTTGGCCGTAAAACAACCGGAGGCAAAAACGGACCAATCTATGTAGTCACTGACCCATC 596
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 540 ATTTGGCCGGAAAACAACCGGAGGCAAAAACGGACCGATCTATGTAGTCACTGACCCATC 599
Query 597 CGACAACGATCTACTGAACCCAAAACC-GGGAACTATAAGACACGCCGTGACAAGAGACC 655
||||||||||||||| || |||||||| ||| |||||||| |||||||||||||| ||||
Sbjct 600 CGACAACGATCTACTAAAACCAAAACCAGGG-ACTATAAGGCACGCCGTGACAAGGGACC 658
Query 656 GACCACTGTGGATCGTATTCGCGAGAAGCATGATCATAAAACTGCAACAAGAACTGATCA 715
||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GACCACTCTGGATCATCTTTGCGAGAAGCATGATCATAAAACTGCAACAAGAACTGATCA 718
Query 716 TAACGAATGATAAAACAATCGACGGTCGGGGAGCGAGAATTTATATAACTGGGGGTGCAG 775
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 719 TAACGAATGATAAAACAATCGACGGTCGGGGAGCGAAAATTTATATCACTGGGGGTGCAG 778
Query 776 GTTTAACGTTGCAGTTCGTGAGGAATGTGATAATACATAATGTTCATATCAAACTCATTA 835
||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||
Sbjct 779 GTTTAACGTTGCAGTTCGTCAGGAATGTGATAATACATAATATTCATATCAAACAGATTA 838
Query 836 AAAAAGGAGTTGGTGGGGTGATTAGAGACTCCGAGCATCATTATGGGCATCGGACAATGA 895
||| |||| ||||||| |||||| |||||||||||| |||| ||||| ||||||| |||
Sbjct 839 AAAGGGGAGCTGGTGGGTTGATTATAGACTCCGAGCAACATTTTGGGCTTCGGACAGTGA 898
Query 896 GTGATGGTGATGGGATTAATATTTTTGGAGCAACGAATGTTTGGATCGATCATGTCTCAA 955
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GTGATGGCGATGGGATTAATATTTTTGGAGCAACGAATGTTTGGATCGATCATGTCTCAA 958
Query 956 TGACGGATTGTTCTGATGGGATGATTGATGCGATCATGGGATCGACCGCGATTACTATCT 1015
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 959 TGACGGATTGTTCTGATGGGATGATTGATGCGATCATGGGATCGACTGCAATTACTATCT 1018
Query 1016 CCAATTCACATTTTACCGACCACGACGAGGTGATGCTGTTTGGGGGTACAAACAAGGATG 1075
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1019 CCAATTCCCATTTTACCGACCACGACGAGGTGATGCTATTTGGGGGTACAAACAAGGATG 1078
Query 1076 TGATCGACAAGAAAATGCAGATAACGGTTGCGTTTAACCATTTTGGTAAGAGATTGAAGC 1135
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1079 TGATCGACAAGAAAATGCAGATAACAGTTGCGTTTAACCATTTTGGTAAGAGATTGAAGC 1138
Query 1136 AAAGAATGCCAAGGGTCAGATATGGTTTGGTCCATGTTGTGAACAATGACTACACTCACT 1195
|||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1139 AAAGAATGCCTAGAGTCAGATTTGGTTTGGTCCATGTTGTGAACAATGACTACACTCACT 1198
Query 1196 GGGAAATGTATGCAATTGGTGGAAACATGAACCCTACCATTATAAGCCAAGGCAATCGTT 1255
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1199 GGGAAATGTATGCAATTGGTGGAAACATGAACCCTACCATTATAAGTCAAGGCAATCGTT 1258
Query 1256 TCATTGCTCCTCCTATTGAAGATTCCAAGCAGGTTACAAAGAGAGAGTACACACCTTATC 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCATTGCTCCTCCTATTGAAGATTCCAAGCAGGTTACAAAGAGAGAGTACACACCTTATC 1318
Query 1316 CTGAATGGAAAACATGGAATTGGCAATCAGAGAAAGATTATTTCTTGAACGGAGCTTACT 1375
||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1319 CTGAATGGAAATCATGGAACTGGCAATCAGAGAAAGATTATTTCTTGAATGGAGCTTACT 1378
Query 1376 TTGTGCAATCAGGAAAAGCAAATGCGTGGAGCTCTACCCCGAAAAATCCAATCCCTAGAA 1435
|||||||||||||||| || || ||||||||| | ||||| |||||||||||||||||||
Sbjct 1379 TTGTGCAATCAGGAAAGGCGAACGCGTGGAGCGCAACCCCAAAAAATCCAATCCCTAGAA 1438
Query 1436 AGTTTGCAATCCGGCCACAGCCAGGAACAAAGGTCAGAAGACTCACCAAGGATGCTGGTA 1495
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1439 AGTTTGCAATCCGGCCACAGCCAGGAACAAAGGTCAGAAGACTTACCAAGGATGCTGGTA 1498
Query 1496 CGCTTGGCTGCAAACCGGGCAAGTCCTGCTGAGAAAAGCTCCATGTTCGTGCGTGTGTGT 1555
|||||||||||||||| ||||||||||||||||||||||| ||| | |||||||||
Sbjct 1499 CGCTTGGCTGCAAACCTGGCAAGTCCTGCTGAGAAAAGCT---TGT--G--CGTGTGTGT 1551
Query 1556 TCCCGTGTTGTTATGGTAACAAAGaaaaaaaaa--GACAAAAAGAACTGTACT-TGTTGT 1612
|| ||| |||||||||||||| ||||||||| ||||||||||| |||| | ||||||
Sbjct 1552 TCA--TGT-GTTATGGTAACAAACAAAAAAAAAAAGACAAAAAGAATTGTA-TGTGTTGT 1607
Query 1613 GGATGGTGTTTGTAACAAATTGTGCATAATGCAGTACGGATTATTATTATTAGAAAAAAT 1672
|||||||||||||||||||||||||||||||||||| | ||||||| ||||||||
Sbjct 1608 GGATGGTGTTTGTAACAAATTGTGCATAATGCAGTA----T-ATTATTA---GAAAAAAT 1659
Query 1673 ATAGGTTTCAATTTTTTGTTGGATGCGAAAAAATTCAAGGAAAAAA 1718
|||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1660 ATAGGTTTCA-TTTTTTGTTGGATGCGAAAAAATTGAAGGAAAAAA 1704
> AT1G14420.1 | Symbols: AT59 | Pectate lyase family protein |
chr1:4931566-4933515 REVERSE LENGTH=1768
Length=1768
Score = 732 bits (396), Expect = 0.0
Identities = 857/1074 (80%), Gaps = 54/1074 (5%)
Strand=Plus/Plus
Query 464 CGATCGATAAATGCTGGCGAGGCGA-CAAAAACTGGGAC-AAAAACCGGAAAAAACTAGC 521
|||| || || ||||||||| |||| | ||||||| | || |||||||| ||||||||
Sbjct 427 CGATAGACAACTGCTGGCGATGCGATC-GTAACTGGG-CTAATAACCGGAAGAAACTAGC 484
Query 522 AGATTGCGTCCTTGGATTTGGCCGTAAAACAACCGGAGGCAAAA-ACGGACCAATCTATG 580
|| || || || ||||| ||||| | ||| |||||||| |||| ||||||| || || |
Sbjct 485 CGACTGTGTGCTCGGATTCGGCCGGAGAACCACCGGAGG-AAAAGACGGACCGATATACG 543
Query 581 TAGTCACTGACCCATCCGACAACGATC-TACTGAACCCAAAACCGGGAAC-TATAAGACA 638
| |||| ||| | || |||||||||| || | ||||| ||||| ||||| | |||| ||
Sbjct 544 TCGTCAAAGACGCGTCTGACAACGATCTTA-TCAACCCTAAACCAGGAACGT-TAAGGCA 601
Query 639 CGCCGTGACAAGAGACCGACCACTGTGGATCGTATTCGCGAGAAGCATGATCATAAAACT 698
|| ||||| ||||| |||| || |||||| ||||||| ||||||||||||||||||||
Sbjct 602 TGCAGTGACTCGAGACGGACCGCTTTGGATCATATTCGCAAGAAGCATGATCATAAAACT 661
Query 699 GCAACAAGAACTGATCATAACGAATGATAAAACAATCGACGGTCGGGGAGCGAGAATTTA 758
||||||||||||||| ||||||| || ||||||||||| || | ||||| || ||||
Sbjct 662 GCAACAAGAACTGATGATAACGAGCGACAAAACAATCGATGGAAGAGGAGCTAGGGTTTA 721
Query 759 TATAACTGG-GGGTGCAGGTTTAACGTTGCAGTTCGTGAGGAATGTGATAATACATAATG 817
|| | ||| ||||| || ||||||||||| || |||| |||||||| || || |||
Sbjct 722 CATCA-TGGAAGGTGCTGGATTAACGTTGCAATTTGTGAATAATGTGATCATTCACAATA 780
Query 818 TTCATATCAAACTCATT-AAAAAAGGAGTTGGTGGGGTGATTAGAGACTCCGA-GCATCA 875
|| || |||| | |||| ||| |||||| |||| |||||||| || || |||
Sbjct 781 TTTATGTCAAGCACATTGTTCCTGGGA-ACGGTGGGTTGATCAGAGACTCTGAGGC-TCA 838
Query 876 TTAT-GGGCATCGGACAATGAGTGATGGTGATGGGATTAATATT-TTTGGAGCAACGAAT 933
|| |||| | |||||| |||||||||||||| || | | || ||||||||||| |||
Sbjct 839 -CATAGGGCTTAGGACAAAAAGTGATGGTGATGGAATCAGT-TTGTTTGGAGCAACCAAT 896
Query 934 GTTTGGATCGATCATGTCTCAATGAC-GGATTGTTCTGATGGGATGATTGATGCGA-TCA 991
|||||||||| |||||||||||||| || ||| | ||||| ||||| ||||| | | |
Sbjct 897 ATTTGGATCGACCATGTCTCAATGACAAGA-TGTGCAGATGGTATGATCGATGCTATTGA 955
Query 992 TGGGATCGACCGC-GATTACTATCTCCAATTCA--CATTTTACCGACCACGACGAGGTGA 1048
|| || || || | | ||||| ||||| || ||||| ||||||||| | |||||||
Sbjct 956 -CGGCTCCACTGCTG-TAACTATTTCCAA--CAGTCATTTCACCGACCACCAAGAGGTGA 1011
Query 1049 TGCTGTTTGGGG-GTACAAAC-AAGGATGTGATCGACAAGAAAATGCAGATAACGGTTGC 1106
|| ||||||||| | | || || | ||||||||||||||||||||||||||||||||
Sbjct 1012 TGTTGTTTGGGGCG-AGGGACGAA-CACGTGATCGACAAGAAAATGCAGATAACGGTTGC 1069
Query 1107 GTTTAACCATTTTGGTAAGAGATTG-AAGCAAAGAATGCCAAGG-GTCAGATATGGTTTG 1164
||||||||| || |||||| ||||| || || |||||||| | | |||||| || |
Sbjct 1070 GTTTAACCACTTCGGTAAGCGATTGGAA-CAGAGAATGCCTCGTTG-CAGATACGGAACG 1127
Query 1165 GTCCATGTTGTGAACAATGACTACACTCACTGGGAAATGTATGCAATTGGTGGAAACATG 1224
| ||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct 1128 ATACATGTGGTGAACAATGACTACACACATTGGGAAATGTATGCAATTGGTGGGAACATG 1187
Query 1225 AACCCTACCATTATAAGCCAAGGCAATCGTTTCATTGCTCCTCCTATTGAAGATTCCAAG 1284
|||||||| ||||| || |||||||||||||||||||||||||||| |||||| ||||
Sbjct 1188 AACCCTACAATTATTAGTCAAGGCAATCGTTTCATTGCTCCTCCTAATGAAGAAGCCAAA 1247
Query 1285 CAGGTTACAAAGAGAGAGTACACACCTTATCC-TGAATGGAAAACATGGAATTGGCAATC 1343
||| ||||||| |||||||||||||| || | |||||||||| | ||||||||||||||
Sbjct 1248 CAGATTACAAAAAGAGAGTACACACCATA-CGGTGAATGGAAATCTTGGAATTGGCAATC 1306
Query 1344 AGA-GAAAGATTA-TTTCTTGAACGGAGCTTACTTTGTGCAATCAGGAAAAGCAAATGCG 1401
||| | | ||||| ||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct 1307 AGAAGGA-GATTACTTTCTC-AACGGAGCTTATTTTGTGCAATCCGGAAAAGCAAATGCG 1364
Query 1402 TGGAGCTCTACCCCGAAAAATCCAATCCCTAGA-AAGTTTGCAATCCGGCC-ACAGCCAG 1459
|||||||||| ||||||| || |||| | | |||||| |||| || || | | || |
Sbjct 1365 TGGAGCTCTAAACCGAAAACCCCGCTCCCAA-ACAAGTTTACAATTCGACCTAAA-CCGG 1422
Query 1460 GAACAAAGGTCAG-AAGACTCACCAAGGATGCTGG--TACGCTTGGCTGCAAAC 1510
|||| | |||| | || ||| |||| |||||| || ||| ||||||||||||
Sbjct 1423 GAACGATGGTCCGGAA-ACTTACCATGGATGCAGGAGTAC--TTGGCTGCAAAC 1473
> AT2G02730.1 | Symbols: | Protein of unknown function (DUF1664)
| chr2:764604-767436 REVERSE LENGTH=1523
Length=1523
Score = 553 bits (299), Expect = 2e-156
Identities = 387/425 (91%), Gaps = 23/425 (5%)
Strand=Plus/Minus
Query 1297 AGAGAGTACACACCTTATCCTGAATGGAAAACATGGAATTGGCAATCAGAGAAAGATTAT 1356
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 1523 AGAGAGTACACACCTTATCCTGAATGGAAATCATGGAACTGGCAATCAGAGAAAGATTAT 1464
Query 1357 TTCTTGAACGGAGCTTACTTTGTGCAATCAGGAAAAGCAAATGCGTGGAGCTCTACCCCG 1416
|||||||| |||||||||||||||||||||||||| || || ||||||||| | |||||
Sbjct 1463 TTCTTGAATGGAGCTTACTTTGTGCAATCAGGAAAGGCGAACGCGTGGAGCGCAACCCCA 1404
Query 1417 AAAAATCCAATCCCTAGAAAGTTTGCAATCCGGCCACAGCCAGGAACAAAGGTCAGAAGA 1476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1403 AAAAATCCAATCCCTAGAAAGTTTGCAATCCGGCCACAGCCAGGAACAAAGGTCAGAAGA 1344
Query 1477 CTCACCAAGGATGCTGGTACGCTTGGCTGCAAACCGGGCAAGTCCTGCTGAGAAAAGCTC 1536
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1343 CTTACCAAGGATGCTGGTACGCTTGGCTGCAAACCTGGCAAGTCCTGCTGAGAAAAGCT- 1285
Query 1537 CATGTTCGTGCGTGTGTGTTCCCGTGTTGTTATGGTAACAAAGaaaaaaaaa--GACAAA 1594
||| | ||||||||||| ||| |||||||||||||| ||||||||| ||||||
Sbjct 1284 --TGT--G--CGTGTGTGTTCA--TGT-GTTATGGTAACAAACAAAAAAAAAAAGACAAA 1234
Query 1595 AAGAACTGTACT-TGTTGTGGATGGTGTTTGTAACAAATTGTGCATAATGCAGTACGGAT 1653
||||| |||| | |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1233 AAGAATTGTA-TGTGTTGTGGATGGTGTTTGTAACAAATTGTGCATAATGCAGTA----T 1179
Query 1654 TATTATTATTAGAAAAAATATAGGTTTCAATTTTTTGTTGGATGCGAAAAAATTCAAGGA 1713
||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1178 -ATTATTA---GAAAAAATATAGGTTTCA-TTTTTTGTTGGATGCGAAAAAATTGAAGGA 1124
Query 1714 AAAAA 1718
|||||
Sbjct 1123 AAAAA 1119
> AT4G13210.2 | Symbols: | Pectin lyase-like superfamily protein
| chr4:7669948-7673376 FORWARD LENGTH=1650
Length=1650
Score = 93.5 bits (50), Expect = 6e-18
Identities = 283/388 (73%), Gaps = 46/388 (12%)
Strand=Plus/Plus
Query 898 GATGGTGATGGGATTAATATTTTTGGAGCAACG-AATGTTTGGATCGATCAT--GTCTCA 954
||||||||||| ||| ||||||||| | | | || ||||||| |||||| ||||
Sbjct 798 GATGGTGATGGTATTTCGATTTTTGGATCTA-GTCATATTTGGATTGATCATAATTCTC- 855
Query 955 ATGACGGA-TTGTTCTGATGGGA-TGATTGATGCGATCATGGGATCGACCGCGATTACTA 1012
| | || |||| ||||| ||| |||| || || || |||||||| || || ||||| |
Sbjct 856 -TTTC-GAGTTGTGCTGAT-GGATTGATAGACGCAATTATGGGATCTACTGCTATTACCA 912
Query 1013 TCTCCAATTCACATT-T-T-AC-CGACCACGACGAGG-TGATGCTGTTTGGGG-GTA-C- 1064
|||| || | | ||| | | || | ||||| |||||| | || || |||||| || |
Sbjct 913 TCTCTAA-T-A-ATTATCTCACTC-ACCACAACGAGGCT-ATTTTG-TTGGGGCATACCG 966
Query 1065 AAACA-AGGATGTGATCGACAAGAA-AATGC-AGATAACGGTTGCGTTTAACCATTTTGG 1121
| || | | || ||||| || |||| || |||| |||| | |||||||||||
Sbjct 967 ATTCATA-CACCAGA--GACAA-AATGATGCAAG-TAACCATTGCATACAACCATTTTGG 1021
Query 1122 TAAG-AGAT-TGA-AGCAAAGAATGCCAAGGGT-CAGATATGGTTTGGTCCATGTTGTGA 1177
|| || | | | | || |||||||||| ||| ||| |||| | | || || || |
Sbjct 1022 --AGAAGGTCTTATA-CAGAGAATGCCAA-GGTGCAGGCATGGATACTTTCACGTAGTAA 1077
Query 1178 ACAATGACTACACTCACTGGGAAATGTATGCAATTGGTGGAAA--CATGAACCCTACCAT 1235
||||||| |||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct 1078 ACAATGATTACACTCACTGGGAAATGTATGCAATTGGTGGAAGTGC-T-AACCCTACCAT 1135
Query 1236 TA-TAAGCCAAGGCAATCGTTTCATTGC 1262
| || | ||||| || || ||| ||||
Sbjct 1136 CAATA-GTCAAGGAAACCGGTTCCTTGC 1162
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84939322140
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5