BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484186 Length=1469 Score E Sequences producing significant alignments: (Bits) Value AT2G02800.1 | Symbols: APK2B | protein kinase 2B | chr2:796680-... 2381 0.0 AT1G14370.1 | Symbols: APK2A, PBL2 | protein kinase 2A | chr1:4... 1066 0.0 > AT2G02800.1 | Symbols: APK2B | protein kinase 2B | chr2:796680-799443 REVERSE LENGTH=1683 Length=1683 Score = 2381 bits (1289), Expect = 0.0 Identities = 1413/1472 (96%), Gaps = 11/1472 (1%) Strand=Plus/Plus Query 1 AAAGAAAAGCTCGTTGGCTTTGTT-CTTTAGAATCTGTTGATTG-TTTATCGAGTGAGAA 58 ||| |||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| Sbjct 135 AAAAAAAAGCTCGTTGGCTTTGTTCCTTT-GAATCTGTTGATTGTTTTATCGAGTGAGAA 193 Query 59 ATGGGTAATTGCTTAGATTCATCAGCTAAAGTGGATAGTAGCAGCCATAGTCCTCATGCT 118 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 194 ATGGGTAATTGCTTAGATTCATCAGCTAAAGTGGATAGTAGCAGCCACAGTCCTCATGCT 253 Query 119 AATTCTGCTTCGTTGAGCTCAAGAGTTTCAAGCAAGACAAGTCGTTCCACAGTTCCTTCA 178 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 254 AATTCTGCTTCATTGAGCTCAAGAGTTTCTAGCAAGACAAGTCGTTCCACAGTTCCTTCA 313 Query 179 AGCTTAAGCATAAATTCTTACAGCAGTGTGGAGTCTTTACCTACACCAAGAACAGAAGGA 238 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 314 AGCTTAAGCATAAATTCTTACAGCAGTGTTGAGTCTTTACCTACACCAAGAACAGAAGGA 373 Query 239 GAGATTTTGTCATCACCAAATCTTAAAGCTTTCACCTTTAACGAGCTCAAGAACGCTACT 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 374 GAGATTTTGTCATCACCAAATCTTAAAGCTTTCACCTTTAACGAGCTCAAGAACGCTACG 433 Query 299 AGGAA-TTTCCGACCCGATAGTCTTTTAGGTGAAGGAGGTTTTGGTTATGTGTTTAAAGG 357 ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 434 AGGAACTTT-CGACCCGATAGTCTTTTAGGTGAAGGAGGTTTTGGCTATGTGTTTAAAGG 492 Query 358 ATGGATTGATGGAACTACTTTAACTGCTTCAAAACCGGGTTCTGGAATCGTTGTCGCTGT 417 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct 493 GTGGATTGATGGAACTACTTTAACTGCTTCAAAACCGGGTTCTGGAATTGTTGTTGCGGT 552 Query 418 TAAGAAGCTTAAAGCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACTGAAGTGAACTA 477 ||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct 553 TAAGAAGCTTAAAACTGAAGGTTATCAAGGTCATAAAGAGTGGTTGACTGAAGTGAACTA 612 Query 478 TCTTGGTCAGCTTAGTCACCCAAATCTTGTCAAACTAGTTGGGTATTGTGTAGAGGGCGA 537 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 613 TCTTGGTCAGCTTAGTCACCCAAATCTCGTCAAACTTGTTGGGTATTGTGTAGAGGGAGA 672 Query 538 AAACCGGTTACTGGTATACGAGTTCATGCCAAAAGGAAGCTTGGAGAATCATCTTTTTAG 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 673 AAACCGGTTACTGGTATACGAGTTCATGCCAAAAGGAAGCTTGGAGAATCATCTTTTTAG 732 Query 598 ACGTGGTGCACAGCCACTTACGTGGGCTATAAGGATGAAAGTTGCAATAGGAGCAGCCAA 657 |||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 733 ACGTGGCGCTCAGCCACTTACGTGGGCTATAAGGATGAAAGTTGCAATAGGGGCTGCCAA 792 Query 658 GGGACTTACTTTTCTCCATGATGCAAAATCGCAAGTGATATACAGAGACTTTAAAGCTGC 717 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 793 AGGACTTACTTTTCTCCATGATGCGAAATCGCAAGTGATATACAGAGACTTTAAAGCTGC 852 Query 718 TAACATCCTACTCGACGCGGAATTCAACAGTAAACTTTCAGACTTCGGTCTAGCTAAAGC 777 |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 853 TAACATTCTACTTGATGCGGAATTCAACAGTAAACTTTCAGACTTCGGTCTAGCTAAAGC 912 Query 778 AGGTCCTACCGGTGACAAGACTCATGTGTCCACACAAGTCATGGGTACTCACGGATATGC 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 913 AGGTCCTACCGGTGACAAGACTCATGTGTCCACACAAGTCATGGGTACTCACGGATATGC 972 Query 838 CGCCCCTGAATATGTAGCAACAGGTCGATTAACAGCTAAGAGCGATGTATACAGTTTCGG 897 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 973 TGCCCCGGAATATGTAGCAACAGGTCGATTAACTGCTAAGAGCGATGTATACAGTTTCGG 1032 Query 898 TGTGGTACTACTGGAATTACTCTCAGGACGAAGAGCGGTGGACAAATCAAAAGTGGGAAT 957 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1033 TGTGGTACTACTGGAATTACTCTCAGGACGAAGAGCGGTGGACAAATCAAAAGTGGGAAT 1092 Query 958 GGAACAGAGTCTTGTGGACTGGGCAACACCGTATCTTGGTGACAAGCGAAAGCTCTTTAG 1017 |||||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct 1093 GGAACAGAGTCTAGTGGACTGGGCAACACCGTATCTCGGCGACAAGCGGAAGCTCTTTAG 1152 Query 1018 AATAATGGACACGAGATTAGGCGGTCAGTATTCTCAAAAAGGAGCATACACAGCAGCTAG 1077 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1153 AATAATGGACACGAGATTAGGCGGTCAGTATCCTCAAAAAGGAGCATACACAGCAGCTAG 1212 Query 1078 TCTTGCATTGCAATGCTTAAACCCCGACGCAAAACTCAGACCTAAAATGTCAGAAGTTTT 1137 |||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||| Sbjct 1213 TCTTGCATTGCAATGCTTAAACCCTGACGCAAAACTGAGACCGAAAATGTCGGAAGTTTT 1272 Query 1138 GGCCAAATTAGATCAGCTTGAATCAACGAAACCTGGAACTGGAATTGGAAACAGACAAGC 1197 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1273 GGCCAAATTAGATCAGCTTGAATCAACGAAACCTGGAACTGGAGTTGGAAACAGACAAGC 1332 Query 1198 TCAGATTGATTCCCCAAGAGGTAGTAATGGATCTGTTGTACAGAAATCTCCGAGGAGGTA 1257 ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1333 ACAGATTGATTCCCCAAGAGGTAGTAATGGATCTATTGTACAGAAATCTCCAAGGAGGTA 1392 Query 1258 TAGTTATGATCGGCCTCTCTTACACATAACTCCTGGTGCTTCTCCTTTGCCTTCTCACAA 1317 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1393 TAGTTATGATCGGCCTCTCTTACACATAACTCCTGGTGCTTCTCCTTTGCCTACTCACAA 1452 Query 1318 TCACTCTCCTCGTGTAAGATAGGAATCACGGTAATAGTTTTTCTTTTGTCTTTGTCTGTT 1377 ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| Sbjct 1453 TCACTCTCCTCGTGTAAGATAGGAATCACTGTAATAGTTAT-CTTTTGTCTTTGTCTGTT 1511 Query 1378 GTATGCTGCTCTGTGTGTAAAATGTGTTGTGTAACGGACCAAAGTTTCATTCTTGGCTCA 1437 |||||||| | | ||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1512 GTATGCTG-T-T-TGT--AAAATGTGTTGTGTAATGGACCAAAGTTTCATTCTTGGCTCA 1566 Query 1438 GTTTATAAAATTTGGTTTCAATATGGTTTGTT 1469 ||||||||||||||||||| ||||||||||| Sbjct 1567 ATTTATAAAATTTGGTTTCAGTATGGTTTGTT 1598 > AT1G14370.1 | Symbols: APK2A, PBL2 | protein kinase 2A | chr1:4915576-4918138 FORWARD LENGTH=1743 Length=1743 Score = 1066 bits (577), Expect = 0.0 Identities = 1075/1310 (82%), Gaps = 56/1310 (4%) Strand=Plus/Plus Query 56 GAAATGGGTAATTGCTTAGATTCATCAGCTAAAGTGGATAGTAGCAGCCATAGTCCTCAT 115 |||||||||||||| ||||||||||||||||||||||||| ||||| |||||| || ||| Sbjct 281 GAAATGGGTAATTGTTTAGATTCATCAGCTAAAGTGGATAATAGCAACCATAGCCCACAT 340 Query 116 GCTAATTCTGCTTCGTT-GAGCTC-AAGAGTTTCAAGCAAGACAAGTCGTTCCACAGTTC 173 |||||||||||||| || | |||| || |||||||||||||||||| ||||| || | || Sbjct 341 GCTAATTCTGCTTC-TTCGGGCTCTAA-AGTTTCAAGCAAGACAAGCCGTTCAACGGGTC 398 Query 174 CTTCAAG-CTTAAGCATAAATTCTTACAG--CAG-T-GT-G----GAGTCTTTACCTACA 223 ||||| | | |||||| || ||||||||| ||| | || | | | | ||||| ||| Sbjct 399 CTTCAGGAC-TAAGCACAACTTCTTACAGCACAGATAGTAGTTTTGGGCCATTACCAACA 457 Query 224 CCAAGAACAGAAGGAGAGAT-TTTGTCATCACCAAATCTTAAAGCTTTCACCTTT-AACG 281 | || |||||||||||||| || ||||| || || || |||||||||| |||| |||| Sbjct 458 CTTAGGACAGAAGGAGAGATACTT-TCATCGCCTAACCTAAAAGCTTTCA-CTTTCAACG 515 Query 282 AGCTCAAGAACGCTACTAGGAA-TTTCCGACCCGATAGTCTTTTAGGTGAAGGAGGTTTT 340 | ||||||||||| |||| ||| ||| || | |||| ||| |||| ||||||||||| Sbjct 516 AACTCAAGAACGCGACTAAGAACTTT-CGTCAAGATAATCTACTAGGGGAAGGAGGTTTC 574 Query 341 GGTTATGTGTTTAAAGGATGGATTGATGGAACTA-CTTTAACTGCTTCAAAACCGGGTTC 399 |||| ||| || ||||||||||||||| ||| | || | ||||||||| || ||||| Sbjct 575 GGTTGTGTATTCAAAGGATGGATTGATCAAAC-ATCTCTCACTGCTTCACGTCCCGGTTC 633 Query 400 TGGAATCGTTGTCGCTGTTAAGAAGCTTAAAG-CTGAAGGTTTTCAAGGTCATAAGGAGT 458 |||||||||||| ||||||||| ||||| ||| |||||||||||||||||||||| |||| Sbjct 634 TGGAATCGTTGTTGCTGTTAAGCAGCTT-AAGCCTGAAGGTTTTCAAGGTCATAAAGAGT 692 Query 459 GGTTGACTGAAGTGAACTATCTTGGTCAGCTTAGTCACCCAAATCTTGTCA-AACTAGTT 517 ||||||||||||| |||||||||||||| |||||||||||||||||||| | ||||||| Sbjct 693 GGTTGACTGAAGTAAACTATCTTGGTCAACTTAGTCACCCAAATCTTGT-ATTACTAGTT 751 Query 518 GGGTATTGTGTAGAGGGCGAAAACCGG-TTACTGGTATACGAGTTCATGCCAAAAGGAAG 576 |||||||| | || |||||||||||| || || ||||| || ||||||||||||||||| Sbjct 752 GGGTATTGCGCGGAAGGCGAAAACCGGCTT-CTTGTATATGAATTCATGCCAAAAGGAAG 810 Query 577 CTTGGAGAATCATCTTTTTAGACGTGGTGCACAGCCACTTACGTGGGCTATAAGGATGAA 636 ||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| Sbjct 811 CTTGGAGAATCATCTTTTTAGACGTGGGGCGCAGCCACTTACATGGGCAATAAGGATGAA 870 Query 637 AGTTGCAATAGGAGCAGCCAA-GGGACTTACTTTTCTCCATGATGCAAAATCGCAAGTGA 695 ||| || |||| ||||| || ||| || |||||||| ||||| ||||| || ||||||| Sbjct 871 AGTGGCGGTAGGTGCAGCTAAAGGG-CTAACTTTTCTTCATGAAGCAAAGTCACAAGTGA 929 Query 696 TATACAGAGACTTTAAAGCTGCTAACATCCTACTCGACGCGGAATTCAACAG-TAAACTT 754 |||||||||||||||||||||||||||| ||||||||||| || ||||| | ||| ||| Sbjct 930 TATACAGAGACTTTAAAGCTGCTAACATTCTACTCGACGCTGACTTCAAT-GCTAAGCTT 988 Query 755 TCAGACTTCGG-TCTAGCTAAAGCAGGTCCTACCGGTGACAAGACTCATGTGTCCACACA 813 ||||| ||||| | | || |||||||||||||| ||||| || || |||||||| ||| | Sbjct 989 TCAGATTTCGGAT-TGGCAAAAGCAGGTCCTACTGGTGATAATACACATGTGTCAACA-A 1046 Query 814 AG-TCATGGGTACTCACGGATATGCCGCCCCTGAATATGTAGCAACAGGTCGATTAACAG 872 || |||| |||||||| |||||||| || ||||||||||| || |||||| ||||||| | Sbjct 1047 AGGTCATTGGTACTCATGGATATGCAGCTCCTGAATATGTTGCCACAGGTAGATTAACCG 1106 Query 873 CTAAGAGCGATGTATACAGTTTCGGTGTGGTACTACTGGAATTACTCTCAGGACGAAGAG 932 | ||||| ||||| ||||| ||||| || || ||||| ||| || | |||||||| | | Sbjct 1107 CAAAGAGTGATGTGTACAGCTTCGGGGTCGTGCTACTAGAACTAATATCAGGACGGCGTG 1166 Query 933 CGGTGGACAAATCAAAAGTG-GGAATGGAACAGAGTCTTGTGGACTGGGCAACACCGTAT 991 | ||||||| || || | | |||| || | |||||||| || |||||||||||||| Sbjct 1167 CCATGGACAATTCGAATG-GAGGAAACGAGTATAGTCTTGTAGATTGGGCAACACCGTAC 1225 Query 992 CTTGGTGACAAGCGAAAGCTCTTTAGAATAATGGACACGAGATTAGGCGGTCAGTATTCT 1051 ||||| || ||||||||||| ||| | ||||||||||||| | |||| ||||| ||| | Sbjct 1226 CTTGGCGATAAGCGAAAGCTTTTTCGCATAATGGACACGAAACTAGGGGGTCAATATCCA 1285 Query 1052 CAAAAAGGAGCATACACAGCAGCTAGTCTTGCATTGCAATGCTTAAACCCCGACGCAAAA 1111 ||||| ||||| | |||||| |||| ||||||||||||||||||||| ||||| |||||| Sbjct 1286 CAAAAGGGAGCTTTCACAGCTGCTAATCTTGCATTGCAATGCTTAAATCCCGATGCAAAA 1345 Query 1112 CTCAGACCTAAAATGTCAGAAGTTTTGGCCAAATTAGATCAGCTTGAATCAACGAAACCT 1171 ||| | || ||||||||||| ||||| | || |||||| ||||| ||||| || | | Sbjct 1346 CTCCGGCCAAAAATGTCAGAGGTTTTAGTCACATTAGAACAGCTAGAATC--CGTTGC-T 1402 Query 1172 GGAAC-TGGAATTGGAAACAGACAAGCTCAGATTGATTCCCCAAGAGGT-AGTAATGGAT 1229 ||| ||||| ||||| || | || || || || |||||| | | | || | Sbjct 1403 A-AACCTGGAACC--AAACACAC---C-CAAATGGAATCTCCAAGATTTCA-TCATTCTT 1454 Query 1230 CTGTTGTACAGAAATCTCCGAGGAGG-TATAGTTATGATCGGCCTCT-CTTACACATAAC 1287 ||||| | |||||||||||| | | | |||||| ||||||||||||| || ||||| || Sbjct 1455 CTGTTATGCAGAAATCTCCG-GTAAGATATAGTCATGATCGGCCTCTGCTG-CACATGAC 1512 Query 1288 TCCTGGTGCTTCTCCTTTGCCTTCTCACAATCACTCTCCTCGTGTAAGAT 1337 ||||||||| || ||||| |||||| ||| ||| |||||||||||||||| Sbjct 1513 TCCTGGTGCATCGCCTTTACCTTCTTACACTCAATCTCCTCGTGTAAGAT 1562 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72439386435 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5