BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484226 Length=1620 Score E Sequences producing significant alignments: (Bits) Value AT2G03210.1 | Symbols: FUT2, ATFUT2 | fucosyltransferase 2 | ch... 2420 0.0 > AT2G03210.1 | Symbols: FUT2, ATFUT2 | fucosyltransferase 2 | chr2:968335-970018 REVERSE LENGTH=1620 Length=1620 Score = 2420 bits (1310), Expect = 0.0 Identities = 1523/1626 (94%), Gaps = 14/1626 (1%) Strand=Plus/Plus Query 1 ATGAGAATCACAGAGATCTTAGCTTTTTTCATGGTTTTAATCCCTGTCTTACTAGTAATC 60 |||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 1 ATGAGAATCACAGAGATCTTAGCTTTGTTCATGGTTTTAGTCCCTGTCTCGCTAGTAATC 60 Query 61 GTAGCCATGTTTGGATATGATCAAGGAAATGGTTTTGTAGAGGCATCAAGAATCATACGA 120 |||||||||||||||||||||||||||||||| |||||| | ||||| ||| |||| | Sbjct 61 GTAGCCATGTTTGGATATGATCAAGGAAATGGCTTTGTACAAGCATCTAGATTCAT---A 117 Query 121 ATGGAACCGGAACCAAACGTGACAT-C-C-TCAGATGATTCAGCA-T--TGCAGAGAGAT 174 | || ||||||||| ||||||| | | |||||||||||| || | ||||||||||| Sbjct 118 A--CAA-TGGAACCAAATGTGACATCCTCATCAGATGATTCATCACTAGTGCAGAGAGAT 174 Query 175 CAGGAACAAAAAGATTCTGTAGATTTGTCTCTGCTTGGAGGACTACTTGTTTCTGGTTTC 234 || ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||| Sbjct 175 CAAGAACAAAAAGATTCTGTAGATATGTCTCTGCTTGGAGGGCTACTTGTATCTGGTTTC 234 Query 235 AAAAAAGAGTCTTGCTTGAGTAGATACCAATCTTACCTCTATCGTAAAGCTTCACCGTAT 294 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 235 AAGAAAGAGTCTTGCTTGAGTAGATACCAATCTTACCTCTACCGTAAAGCTTCACCGTAT 294 Query 295 AGACCTTCTTTACATCTACTTTCGAAGCTTAGAGCTTACGAAGAGCTTCATAAACGATGT 354 | |||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 295 AAACCTTCGTTGCATCTACTTTCGAAGCTTAGAGCTTACGAAGAGCTTCATAAAAGATGT 354 Query 355 GGACCGGGAACGAGACCGTATACCAATGCAGAGAGACTGCTTAAACCGAAACAAACTGGT 414 ||||||||||| |||| ||||||||||||||| ||| ||||||||| ||||||||| ||| Sbjct 355 GGACCGGGAACAAGACAGTATACCAATGCAGAAAGATTGCTTAAACAGAAACAAACAGGT 414 Query 415 GA-TTCAGAACCAGAAGGATGCAAGTATGTTGTTTGGATGTCGTTTAGCGGATTAGGAAA 473 || | ||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GAGAT-GGAATCACAAGGATGCAAGTATGTTGTTTGGATGTCGTTTAGCGGATTAGGAAA 473 Query 474 CAGGATTATCAGTATTGCCTCTGTGTTTCTGTATGCAATGTTGACGGATAGGGTCTTGCT 533 |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| Sbjct 474 CAGGATTATCAGTATTGCTTCTGTGTTTCTGTATGCAATGTTGACAGATAGAGTCTTGCT 533 Query 534 TGTTGAAGGAGGAGAGCAATTCGCGGATCTATTCTGCGAACCATTCCTCGATACCACTTG 593 |||||||||||| || || ||||||||| ||||||||||||| ||||||||||||||||| Sbjct 534 TGTTGAAGGAGGGGAACAGTTCGCGGATTTATTCTGCGAACCGTTCCTCGATACCACTTG 593 Query 594 GCTACTACCGAAAGATTTCACCTTAACTAGTCAGTTCAGTGGCTTTGGTCAAAACTCAGC 653 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 594 GTTACTACCGAAAGATTTCACCTTAGCTAGTCAGTTCAGTGGCTTTGGTCAAAACTCAGC 653 Query 654 TCATTGCCATGGAGATATGCTGAAGAAGAAACTGATTAACGAATCTTCTGTTTTGTCTCT 713 ||| |||||||||||||||||||||| |||||||||||| ||||| ||||||| |||||| Sbjct 654 TCACTGCCATGGAGATATGCTGAAGAGGAAACTGATTAATGAATCCTCTGTTTCGTCTCT 713 Query 714 GTCTCATCTCTATCTTCATCTAGCTCATGATTACAACGACCACGACAAAATGTTCTTCTG 773 |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct 714 GTCTCATCTCTATCTTCATCTAGCTCATGACTACAATGAGCACGACAAAATGTTCTTCTG 773 Query 774 CGCAGAAGATCAGAATCTCTTAGAGAATGTTCCTTGGTTGATCATGAGGACAAACAACTT 833 | ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 774 TGAAGAAGATCAAAATCTCTTAAAGAATGTTCCTTGGTTGATCATGAGGACAAACAACTT 833 Query 834 CTTTGCACCGTCTCTCTTCTTGATCCCTTCTTTCGAGGAAGAGCTCGGTATGATGTTTCC 893 ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| Sbjct 834 CTTTGCACCGTCTCTTTTCTTGATTTCTTCTTTCGAAGAAGAGCTCGGTATGATGTTTCC 893 Query 894 CAAGAAAGGAACGGTATTTCACCATTTGGGTCGTTACCTTTTCCATCCTTCGAATCAAGT 953 | ||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 894 CGAGAAAGGAACGGTTTTTCACCATTTAGGTCGTTACCTTTTCCATCCTTCAAATCAAGT 953 Query 954 CTGGGGACTAATCACAAGATACTATCAAGCTTACTTAGCCAAAGCTGATGAGAGGATTGG 1013 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 954 CTGGGGACTAATCACAAGATACTATCAAGCTTACTTAGCCAAAGCTGATGAAAGGATTGG 1013 Query 1014 TCTTCAAATAAGAGTCTTTGATGAGAAATCCGGCGTATCTCCTCAAGTCACAAAGCAAAT 1073 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1014 TCTTCAAATAAGAGTCTTTGATGAGAAATCCGGCGTATCTCCTCGAGTCACAAAGCAAAT 1073 Query 1074 CATTTCGTGCGTTCAAAACGAGGATTTGTTACCGAAACTAAGCAAAGGAGAAGAACAACA 1133 ||||||||| |||||||||||| || ||||||||| |||||||||||| ||||||||| | Sbjct 1074 CATTTCGTGTGTTCAAAACGAGAATCTGTTACCGAGACTAAGCAAAGGTGAAGAACAATA 1133 Query 1134 CAAGCAGCCATCAGAAGAAGACTCGAAACTCAAATCGGTCTTGATCACTTCTTTAACAAC 1193 ||||||||||||||||||||| | |||||||||||| |||||| |||| ||||||||||| Sbjct 1134 CAAGCAGCCATCAGAAGAAGAGTTGAAACTCAAATCTGTCTTGGTCACCTCTTTAACAAC 1193 Query 1194 AGGATACTTTGAGATCTTGAAAACAATGTATTGGGAAAATCCAACTGTAACAGGAGAAGT 1253 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 1194 AGGATACTTTGAGATCTTGAAAACAATGTATTGGGAAAATCCAACTGTAACAAGAGATGT 1253 Query 1254 GATTGGAATACATCAGCCAAGTCATGAAGGTCATCAACAAACAGAGAAGCTAATGCATAA 1313 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1254 GATTGGAATACATCAGCCAAGTCATGAAGGACATCAACAAACAGAGAAGCTAATGCATAA 1313 Query 1314 CAGGAAAGCTTGGGCAGAGATGTACTTACTTAGCTTAACCGATAAGTTGGTTATTAGTGC 1373 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1314 CAGGAAAGCTTGGGCAGAGATGTACTTACTCAGCTTAACGGATAAGTTGGTTATTAGTGC 1373 Query 1374 TTGGTCTACATTTGGTTATGTAGCTCAAGGACTTGGAGGATTAAGAGCTTGGATTCTGTA 1433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1374 TTGGTCTACATTTGGTTATGTAGCTCAAGGACTTGGAGGATTAAGAGCTTGGATTCTGTA 1433 Query 1434 TAAACAAGAGAATCAAACCAACCCAAATCCACCTTGTGGTAGAGCTATGTCACCAGATCC 1493 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1434 TAAACAAGAGAATCAAACCAACCCAAATCCACCTTGCGGTAGAGCTATGTCACCAGATCC 1493 Query 1494 TTGTTTCCATGCCCCTCCTTACTACGATTGCAAAGCTAAGCAAGGAACCGACACCGGTAA 1553 |||||||||||| ||||||||||| ||||||||||| ||| ||||||| ||||| ||||| Sbjct 1494 TTGTTTCCATGCTCCTCCTTACTATGATTGCAAAGCAAAGAAAGGAACTGACACTGGTAA 1553 Query 1554 TGTTGTCCCGCATGTTAGACATTGTGAAGATATTAGCTGGGGACTTAAGCTTGTTGACAA 1613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1554 TGTTGTCCCGCATGTTAGACATTGTGAAGATATTAGCTGGGGACTTAAGCTTGTTGACAA 1613 Query 1614 CTCTTA 1619 || ||| Sbjct 1614 CTTTTA 1619 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80019668730 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5