BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484227
Length=1863
Score E
Sequences producing significant alignments: (Bits) Value
AT2G03220.1 | Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransf... 2628 0.0
AT1G14070.1 | Symbols: FUT7 | fucosyltransferase 7 | chr1:48185... 412 5e-114
AT1G14110.1 | Symbols: FUT9, ATFUT9 | fucosyltransferase 9 | ch... 110 7e-23
> AT2G03220.1 | Symbols: FT1, ATFUT1, ATFT1, MUR2 | fucosyltransferase
1 | chr2:970259-972407 REVERSE LENGTH=1873
Length=1873
Score = 2628 bits (1423), Expect = 0.0
Identities = 1709/1846 (93%), Gaps = 23/1846 (1%)
Strand=Plus/Plus
Query 1 AAATAAAGTAATGAAGTCGGTGACCGTCTCT---GTCTCCCTCAAGAGCAATCAATGGAT 57
||||||||| ||||||||||||| | || | ||||||||||||||||||||||||||
Sbjct 1 AAATAAAGTTATGAAGTCGGTGAGTGACTTTAGAGTCTCCCTCAAGAGCAATCAATGGAT 60
Query 58 CAGAATCCGTACAGGAGAAGATCGTCTCCGATCAGAACCACCACCGGCGGTTCAAAGTCC 117
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 61 CAGAATTCGTACAGGAGAAGATCGTCTCCGATCAGAACCACTACCGGCGGTTCAAAGTCC 120
Query 118 GTAAATTTATCAGAGCTACTTCCGGTGAAGCT-TCTCAGCTTTGGTACGATGAAGCTCAC 176
|| ||||| || || ||||||| ||||| | |||||||| |||||||||||||||||
Sbjct 121 GTTAATTTCTCCGAACTACTTCAAATGAAG-TATCTCAGCTCCGGTACGATGAAGCTCAC 179
Query 177 GAGAACCTTCACTACTTGCTTGATACTCTTCTCTGTATTAGTAGCATTCTCAATGATCTT 236
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 180 GAGAACCTTCACTACTTGCTTGATAGTCTTCTCTGTACTAGTAGCATTCTCAATGATCTT 239
Query 237 TCACCAACACCCATCTGATTCAAATCGGATAATGGGTTTCGCTGAAGCAAGAGTTCTCGA 296
|||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 240 TCACCAACACCCATCTGATTCAAATCGGATTATGGGTTTCGCCGAAGCTAGAGTTCTCGA 299
Query 297 CGCCGGAGTTTTCCCAAATGTTACTAACATCGATTCAAATGGTTCTGATAAGCTTCTCGG 356
||||||||||||||||||||||||| | | | | || || ||||||||||||||||||
Sbjct 300 CGCCGGAGTTTTCCCAAATGTTACT-A-A-C-A-TC-AA---TTCTGATAAGCTTCTCGG 350
Query 357 AGGACTACTTGCTTCTGGTTTTAATGAAGAGTCTTGCCTTAGTAGGTACCAATCAGTACT 416
||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
Sbjct 351 AGGGCTACTTGCTTCTGGTTTTGATGAAGATTCTTGCCTTAGTAGGTACCAATCAGTTCA 410
Query 417 TTACCGTAAACCTTCGCCTTACAAGCCTTCTCCTTATCT-AGTCTCTAAACTTAGAAACT 475
||||||||||||||| ||||||||||| ||| ||||||| | ||||||| ||||||||||
Sbjct 411 TTACCGTAAACCTTCACCTTACAAGCCATCTTCTTATCTCA-TCTCTAAGCTTAGAAACT 469
Query 476 ACGAAATGCTTCACAAGCGATGTGGTCCGGGTACTGAATCTTACAAGAAAGCTCTAAAGC 535
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 470 ACGAAAAGCTTCACAAGCGATGTGGTCCGGGTACTGAATCTTACAAGAAAGCTCTAAAAC 529
Query 536 AACTTGATCAAGAGCATATTGATGGCAATGGTGAATGCAAATATGTTGTGTGGGTTTCTT 595
||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 530 AACTTGATCAAGAACATATTGATGGTGATGGTGAATGCAAATATGTTGTGTGGATTTCTT 589
Query 596 TTAGTGGGTTAGGGAACAGGATACTTTCTCTAGCCTCGGTTTTTCTTTATGCGCTTTTGA 655
|||| || ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 590 TTAGCGGCTTAGGGAACAGGATACTTTCTCTAGCCTCGGTTTTTCTTTACGCGCTTTTAA 649
Query 656 CGAATAGAGTCTTGCTTGTTGACAGAGGGAAAGACATGGATGATCTCTTTTGTGACCCGT 715
|| |||||||||||||||||||| |||||||||||||||||||||||||||| || ||||
Sbjct 650 CGGATAGAGTCTTGCTTGTTGACCGAGGGAAAGACATGGATGATCTCTTTTGCGAGCCGT 709
Query 716 TTCCCGGTATGTCGTGGTTACTGCCTTTAGATTTCCCAATGACTGATCAGTTCGATGGAT 775
||| ||||||||||||||| || |||||||||||||| |||||||||||||| |||||||
Sbjct 710 TTCTCGGTATGTCGTGGTTGCTACCTTTAGATTTCCCTATGACTGATCAGTTTGATGGAT 769
Query 776 TGAATC-AGAAATCCTCGCGTTGTTATGGAGATATAGTGAAGAATGAGGCGATGGATACC 834
| |||| || |||| || |||||||||||| |||| ||||||||| ||| ||| |||||
Sbjct 770 TAAATCAAG-AATCATCTCGTTGTTATGGATATATGGTGAAGAATCAGGTGATTGATACT 828
Query 835 GAGAAAACTCTGTCTCATCTTTATCTTCATCTTGTCCATGATTATGGAGATCATGATAAG 894
||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 829 GAGGGAACTTTGTCTCATCTTTATCTTCATCTTGTTCATGATTATGGAGATCATGATAAG 888
Query 895 ATGTTCTTCTGTGAAGGAGACCAAAAC-TTAATTGGGAAAGTCCCTTGGTTAATCGTCAA 953
|||||||||||||||||||||| |||| || || ||||||||||||||||| || || ||
Sbjct 889 ATGTTCTTCTGTGAAGGAGACC-AAACATTCATCGGGAAAGTCCCTTGGTTGATTGTTAA 947
Query 954 AACAGATAATTACTTTGTTCCATCTCTATGGCTAATCCCGGGGTTCGATGATGAACTAAA 1013
|||||| |||||||||||||||||||| ||| |||| ||||| |||||||||||||||||
Sbjct 948 AACAGACAATTACTTTGTTCCATCTCTGTGGTTAATACCGGGTTTCGATGATGAACTAAA 1007
Query 1014 CAAGCTATTCCCGCAGAAAGCGACTGTCTTTCATCACTTAGGTAGATATCTTTTTCATCC 1073
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 1008 CAAGCTATTCCCACAGAAAGCGACTGTCTTTCATCACTTAGGTAGGTATCTTTTTCACCC 1067
Query 1074 AACAAACCAAGTATAGGGCTTAGTCACTAGGTACTACGAAGCTTACTTATCGCATGCGGA 1133
||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1068 AACTAACCAAGTATGGGGCTTAGTCACTAGATACTACGAAGCTTACTTATCGCATGCGGA 1127
Query 1134 TGAGAAGATTGGGATTCAAGTAAGAGTTTTCGATGTAGGCGCGGGTCCATTTCAGCACGT 1193
||||||||||||||||||||||||||||||||||| || | |||||||||||||||| ||
Sbjct 1128 TGAGAAGATTGGGATTCAAGTAAGAGTTTTCGATGAAGACCCGGGTCCATTTCAGCATGT 1187
Query 1194 TATGGATCAGATTTCATCTTGTACCCAAAAAGAGAAACTTCTACCTGAAGTAGACACACT 1253
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1188 GATGGATCAGATTTCATCTTGTACTCAAAAAGAGAAACTTCTACCTGAAGTAGACACACT 1247
Query 1254 TGTAGAAAGATCTCGCCAAGTTAGA-ACCCCCAAACACAAAGCTGTGCTTGTCACATCTT 1312
|| || ||||||||||| |||| | ||||||||||||||||| ||||||||||||||||
Sbjct 1248 AGTGGAGAGATCTCGCCATGTTA-ATACCCCCAAACACAAAGCCGTGCTTGTCACATCTT 1306
Query 1313 TGAGCTCGGGATACTCAGAGAACTTAAAGAGTATGTATTGGGAATATCCGACATTAACTG 1372
||| | |||| ||| | ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1307 TGAACGCGGGTTACGCGGAGAACTTAAAGAGTATGTATTGGGAATATCCGACATCAACTG 1366
Query 1373 GAGAAATCATCGGTGTTCATCAGCCAAGCCAAGAAGGTTATCAGCAGACGGaaaaaaaGA 1432
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1367 GAGAAATCATCGGTGTTCATCAGCCGAGCCAAGAAGGTTATCAGCAGACCGAAAAAAAGA 1426
Query 1433 TGCATAATGGCAAAGCTCTTGCGGAAATTTACCTTTTGAGTTTGACAGATAATCTTGTGA 1492
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1427 TGCATAATGGCAAAGCTCTTGCGGAAATGTATCTTTTGAGTTTGACAGATAATCTTGTGA 1486
Query 1493 CAAGTGCTTGGTCTACATTTGGATATGTAGCTCAAGGTCTTGGAGGTTTAAAGCCTTGGA 1552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 CAAGTGCTTGGTCTACATTTGGATATGTAGCTCAAGGTCTTGGAGGTTTAAAGCCTTGGA 1546
Query 1553 TACTCTATAAACCCGAGAACCGTACAGCTCCTGATCCTGCGTGTGGTCGGGCTATGTCGA 1612
||||||||| |||||| ||||||||| |||| |||||| |||||||||||||||||||||
Sbjct 1547 TACTCTATAGACCCGAAAACCGTACAACTCCCGATCCTTCGTGTGGTCGGGCTATGTCGA 1606
Query 1613 TGGAGCCTTGTTTCCACGCGCCTCCATTCTATGATTGTAAGGCGAAAACGGGTATTGATA 1672
||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1607 TGGAGCCTTGTTTCCACTCGCCTCCATTCTATGATTGTAAAGCGAAAACGGGTATTGACA 1666
Query 1673 CGGGAAAACTAGTTCCTCATGTGAGACATTGTGAGGATATGAGCTGGGGACTTAAGCTAG 1732
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1667 CGGGAACACTAGTTCCTCATGTGAGACATTGTGAGGATATCAGCTGGGGACTTAAGCTAG 1726
Query 1733 TATGAtttttt-tGTGATTTACTCTGTTTTTGATAATTTGATGTATCATGTAACTTCTTA 1791
||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1727 TATGATTTTTTGTGTGCCTTACTCTGTTTTTGATTATTTGATGTATCATGTAACTTCTTA 1786
Query 1792 AATTAGCTTTTATAAATTCAATTTTTGTGCTTTTGACATTTTCTCT 1837
|||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1787 AATTAGCTTTAATAAAGTCAATTTTTGTGCTTTTGACATTTTCTCT 1832
> AT1G14070.1 | Symbols: FUT7 | fucosyltransferase 7 | chr1:4818548-4820150
FORWARD LENGTH=1530
Length=1530
Score = 412 bits (223), Expect = 5e-114
Identities = 1051/1433 (73%), Gaps = 128/1433 (9%)
Strand=Plus/Plus
Query 380 ATGAAGAGTCTTGCCTT-AGTAGGTACCAATCAGTACTT-TACCGTAAACCTTCGCCTTA 437
||||||| ||||| ||| |||||||| || || | ||| || || || |||||||||||
Sbjct 131 ATGAAGATTCTTG-CTTGAGTAGGTATCAGTC-TTCCTTGTATCGCAAGCCTTCGCCTTA 188
Query 438 CAAG-CCTTCTCCTTATCTAGTCTCTAAACTTAGAAACTACGAAATGCTTCACAAGCGAT 496
| || ||||| |||||| ||||||| ||||||||||| || ||||| |||||||| |
Sbjct 189 C-AGAACTTCTGAATATCTAATCTCTAAGCTTAGAAACTATGAGATGCTCCACAAGCGTT 247
Query 497 GTGGTCCGGGTACTGAAT-CTTACAAGAAAGC-TC-TA-AAGC---AACTTGATCAAGAG 549
| ||||| || |||| || ||||||||| ||| | | |||| | |||||| |||
Sbjct 248 GCGGTCCAGGCACTG-ATGCTTACAAGAGAGCAACAGAGAAGCTTGGTCATGATCATGAG 306
Query 550 CATATT---GAT-G-GC-AATGGTGAATGCAAATATGTTGTGTGGGTTTCT-TTTAGTGG 602
|| || ||| | | |||||||||||||||| |||||||||| || |||| |||
Sbjct 307 AATGTTGGAGATAGCTCTGATGGTGAATGCAAATACATTGTGTGGGTGGCTGTTTA-TGG 365
Query 603 G-TTAGGGAACAGGATACTTTCTCTAGCCTCGGTTTTTCTTTATGCGCTTTTGACGA-AT 660
| || || ||||| |||||| |||| || || || || || || || || ||||| | |
Sbjct 366 GCTT-GGAAACAGAATACTTACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGAC-AGAG 423
Query 661 AGAGTC-TTGCTTGTTGA-CAGAGGGAAAGACA-TGGATGATCTCTTTTGTGACCCGTTT 717
||| || || ||||| || || | | || || | | | ||||||||| ||||| || |||
Sbjct 424 AGAATCATT-CTTGTGGACCA-ACGCAAGGATATTAG-TGATCTCTTCTGTGAGCCTTTT 480
Query 718 CCCGGTA-TGTCGTGGTTACTGCCT-TTAGATTTCCCAATGACT-GATCAGTTCGATGGA 774
|| |||| | || |||||||| ||| || ||||| ||| ||| | | |||| | ||| |
Sbjct 481 CCTGGTACT-TCATGGTTACTTCCTCTT-GATTTTCCATTGA-TGGGTCAGATAGATAGT 537
Query 775 TTGAATCAGAAATCCTCGCGTTGTTATGG-AGATATAG-TGAAGAATGAGGCGATGGATA 832
|| || | | ||| ||||| |||||| || | | || | |||||||| | | || | |
Sbjct 538 TTCAACCGGGAATACTCGCATTGTTACGGAACA-AT-GTTGAAGAATCATACCAT-TA-A 593
Query 833 C-CGAGAA-AACT-CTGTCTCATCTTTATCTTCATCTTGTCCATGATTA-TGGAGATCAT 888
| ||| || || | | || ||||| |||||||||||| |||||||||| || |||||
Sbjct 594 CTCGACAACAA-TCCCATCACATCTCTATCTTCATCTTCTCCATGATTACAGG-GATCAA 651
Query 889 GATAAGATGTTCTTCTG-TGAAGGAGACCAAAAC-TTAATTGGGAAAGTCCCTTGGTTAA 946
|| ||||||||||| || || | || | | | ||| | | |||||||||||| |
Sbjct 652 GACAAGATGTTCTTTTGCCAAAAG-GATC-AGTCTTTAGTCGACAAAGTCCCTTGGCTGG 709
Query 947 TCGTCAAA-ACAGATAATTACTTTGTTCCATCTCTATGGCT-AATCCCGGGGTTCGATGA 1004
| |||||| || | ||||||| |||||||||||||||| ||| || | ||| | |
Sbjct 710 TTGTCAAATCCA-ACCTTTACTTTATTCCATCTCTATGGCTGAAT-CCTAGTTTCCA-AA 766
Query 1005 -TGAACTAAACAAGCTATTCCCGCAGAAAG-CGACTGTCTTTC-ATCACTTAGG-TAGAT 1060
||||||| |||||||||||||||||||| | || ||| ||| | ||| | || | | |
Sbjct 767 CCGAACTAATCAAGCTATTCCCGCAGAAAGAC-ACCGTC-TTCTACCACCT-GGCTCGGT 823
Query 1061 ATCTTTTTCATCCAACAAACCAAGTATAGGGCT-TAGTCACTAGGTACTACGAA-GCTTA 1118
|||||||||| || ||||||||||| | ||| | | ||||| || | |||| || |||||
Sbjct 824 ATCTTTTTCACCCGACAAACCAAGTCT-GGGGTATGGTCACCAGATCCTAC-AATGCTTA 881
Query 1119 CTTATCGCA-TGCGGATGAGAAGA-TTGGGATTCAAGTAAGAGTTTTCGATGTAGGCGCG 1176
|||||| | || || ||| | | | |||||||||||| | |||||| | | || |
Sbjct 882 CTTATC-AAGAGCAGACGAG-ATACTAGGGATTCAAGTACGGGTTTTC-A-GCAGAC-AA 936
Query 1177 GGT--CCATTT-CAGCACGTTATGGATCAGAT-TTCATCTTGTACCCAAAAAGAGAAACT 1232
| |||| |||||||| ||||| || || | | | ||||| |||| |||||||||
Sbjct 937 ACTAAATATTTCCAGCACGTGATGGACCAAATCGT-AGCATGTACACAAAGAGAGAAACT 995
Query 1233 -TCTACCTGAAGTAGAC-ACACTTGTAGAA--AGATCTCGC-CA-A-GTTAGAA-CCC-C 1283
| |||||||| | | | ||| | |||| | | | | | | | | || ||| |
Sbjct 996 GT-TACCTGAATTTG-CTGCACAAGAAGAAGCACAAGTAACTAATACATCA-AATCCCTC 1052
Query 1284 CAAACACAAAGCTGTGCTTGTCACATCTTTG-AGCTCGGGATACTCAGAGAACTTAAAG- 1341
||||| |||||||| || || |||||| || | | | | ||||||| | ||| |||||
Sbjct 1053 CAAACTTAAAGCTGTTCTGGTTACATCTCTGAATC-CAGAATACTCAAATAACCTAAAGA 1111
Query 1342 AGTATGTATTGGGAATATCCGACAT-TAACTGGAGAAATCA-TCGGTGTTCATCAGCCAA 1399
|| |||||||||||| | || || | ||| ||||| || | | | ||| |||||||||
Sbjct 1112 AG-ATGTATTGGGAACACCCAAC-TACAACAGGAGACAT-AGTAGAAGTTTATCAGCCAA 1168
Query 1400 GCCA-AG-AAGGTTATCAGCAGACGGaaaaaaaGATGCATAATGGC-AAA-GCTCTTGCG 1455
| | || |||||| |||||| || || |||||| | || | | ||| || || ||
Sbjct 1169 G-TAGAGAAAGGTT-TCAGCAAACAGACAAAAAGCTTCACGA--CCAAAAGGCCCTGGCA 1224
Query 1456 GAAATTTACCTTTTGAGTTTGACAGATAATCTTGTGACAAGTGCTTGGTCTACATTTGGA 1515
|| || ||||| || || | || ||||| ||||| ||||| |||| ||| |||||||||
Sbjct 1225 GAGATGTACCTCTTAAGCCTAACTGATAAGCTTGTCACAAGCGCTTTGTCAACATTTGGA 1284
Query 1516 TATGTAGCTCAAGGTCTTGGAGGTTTAAAGCCTTGGATACTCTATAAACCCGAGAACCGT 1575
||||||||||||||||||||||| |||||||| ||||||||||| | ||| |||| ||
Sbjct 1285 TATGTAGCTCAAGGTCTTGGAGGGTTAAAGCCATGGATACTCTACACACCAAAGAA--GT 1342
Query 1576 ACAGCTCC--TGATCCTGCGTGTGGTCGGG-CTATGTCGATGGAGCCTTGTTTCCACGCG 1632
|| ||| | |||| | ||||| || | | || || |||||||||||||||| |
Sbjct 1343 TCAAATCCCCTAATCCACCATGTGGCCGTGTC-ATCTCCATGGAGCCTTGTTTCCTTACA 1401
Query 1633 CCTCCATT-CTATG-AT-TGTAAGGCGAAAACGGGTATTGATACGGGAAAACTAGTTCCT 1689
|||||| | | ||| || || ||| | |||| ||| ||| | || | |||| | ||||||
Sbjct 1402 CCTCCAGTAC-ATGGATGTG-AAGCCAAAAA-GGGAATTAACACTGCAAAAATCGTTCCT 1458
Query 1690 CATGTGAGACATTGTGAGGATATGAG-C--TG-GGGACTTAAGCTAGTATGAt 1738
||| ||||||||||| ||| | || | | ||| ||||||||||| ||||
Sbjct 1459 TTTGTAAGACATTGTGAAGATCTTAGACACTATGGG-CTTAAGCTAGT-TGAT 1509
> AT1G14110.1 | Symbols: FUT9, ATFUT9 | fucosyltransferase 9 |
chr1:4830297-4831915 FORWARD LENGTH=1425
Length=1425
Score = 110 bits (59), Expect = 7e-23
Identities = 115/142 (81%), Gaps = 4/142 (3%)
Strand=Plus/Plus
Query 1486 CTTGTGACAAGTGCTTGGTCTACATTTGGATATGTAGCTCAAGGTCTTGGAGGTTTAAAG 1545
||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1168 CTTGTGACAAGCACAAGGTCTACATTTGGATATGTAGCTCAAGGTCTTGGAGGGTTAAAG 1227
Query 1546 CCTTGGATACTCTATAAACCC-GAGA-ACCGTACAGCTCCTGATCCTGCGTGTGGTCGGG 1603
|| ||||||||||| | || | || | | | | |||| | || | |||| | |||
Sbjct 1228 CCATGGATACTCTACGAGCCAAGGGACAA-GAAAA-CTCCAAACCCACCATGTGTTAGGG 1285
Query 1604 CTATGTCGATGGAGCCTTGTTT 1625
| ||||||||||||||||||||
Sbjct 1286 CCATGTCGATGGAGCCTTGTTT 1307
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92218401165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5