BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484301
Length=2750
Score E
Sequences producing significant alignments: (Bits) Value
AT2G03890.1 | Symbols: ATPI4K GAMMA 7, UBDK GAMMA 7, PI4K GAMMA... 3766 0.0
AT1G13640.1 | Symbols: | Phosphatidylinositol 3- and 4-kinase ... 1375 0.0
> AT2G03890.1 | Symbols: ATPI4K GAMMA 7, UBDK GAMMA 7, PI4K GAMMA
7 | phosphoinositide 4-kinase gamma 7 | chr2:1185522-1188545
FORWARD LENGTH=2893
Length=2893
Score = 3766 bits (2039), Expect = 0.0
Identities = 2321/2452 (95%), Gaps = 40/2452 (2%)
Strand=Plus/Plus
Query 332 CGTTTCATGATCGCTTTAGGTATTTGCTT-TACCCGGTTCGTGTTGGTTTTAGACAAAGG 390
||||||||||||| ||||||||| || || || |||| |||||||||||| ||| |||
Sbjct 407 CGTTTCATGATCGGTTTAGGTATCTG-TTATATCCGGCTCGTGTTGGTTTCAGATTTAGG 465
Query 391 CACTGGTCTTGAAGGTCTCTCTTCGGCTACTGCTTCTGT-TGTTTACCAAAAGAAGCCTT 449
||||||||| |||||||| |||||||||||||||||| | |||| |||||||||||||||
Sbjct 466 CACTGGTCTAGAAGGTCTTTCTTCGGCTACTGCTTCT-TCTGTTCACCAAAAGAAGCCTT 524
Query 450 CTTTGGTTTCTTCTTCTGTTTCATGTCGAGGAACTTAGACAGTCCTGTTCAGACACAAAT 509
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 525 TTTTGGTTTCTTCTTCTGTTTCATGTCGAGGAACTTAGACAGTCCTGTTCAGACACAAAT 584
Query 510 GGCAGTGGCAGTGTTT-AAGACTCCCCTTACTGGGGCTAATAAGATGGAAGGGAAGCAGC 568
|||||||||||| ||| |||||||| |||||||| |||| ||||||||||||||||||||
Sbjct 585 GGCAGTGGCAGT-TTTCAAGACTCCTCTTACTGGAGCTAGTAAGATGGAAGGGAAGCAGC 643
Query 569 ATCATAAACATCAGCATCTT-CAGAGGCAATCATCGGGGAGGCGGGTTTTCGTGCAAACT 627
||||||| ||||||||| || ||||||||||||||||||||| | ||||||||||| |||
Sbjct 644 ATCATAAGCATCAGCAT-TTACAGAGGCAATCATCGGGGAGGAGAGTTTTCGTGCAGACT 702
Query 628 GAAACTGGTTGTGTTTTGGGGATGGAGTTGGATCGTAGTGATAATGTTCATACTGTTAAA 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 GAAACTGGTTGTGTTTTGGGGATGGAGTTGGATCGTAGTGATAATGTTCATACTGTTAAA 762
Query 688 AGGAGGCTTCAGATTGCTCTTAATTTCCCGACTGAGGAAAGTTCTTTGACTTATGGTGAT 747
||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 763 AGGAGGCTTCAGATTGCTCTTAATTTCCCTACTGAAGAGAGTTCTTTGACTTATGGTGAT 822
Query 748 ATGGTGTTGACGAATGATTTGAGTGCTGTGAGGAATGATTCTCCGCTTCTGCTGAGACGG 807
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 823 ATGGTGTTGACGAATGATTTGAGTGCTGTGAGGAACGATTCTCCGCTTCTGCTGAAACGG 882
Query 808 AATTTTATGCATAGAAGCTCGTCTACTCCTTGTCTTTCGCCTACTGGGAGGGATTTGCAA 867
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 AACTTTATGCATCGAAGCTCGTCTACTCCTTGTCTTTCGCCTACTGGGAGGGATTTGCAA 942
Query 868 CAGAAAGACCGAAGTGGTCCTATTGAGATATTAGGCCATTCGGATTGCTTTTCGATTGTT 927
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 943 CAGAAAGATCGAAGTGGTCCTATTGAGATACTAGGCCATTCGGATTGCTTTTCGATTGTT 1002
Query 928 AAACATATGGTGAAGGATATTGTTAAGGCGATGAAGATGGGTGTTGAACCGCTTCCTGTT 987
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003 AAACATATGGTTAAGGACATTGTTAAGGCGATGAAGATGGGTGTTGAACCGCTTCCTGTT 1062
Query 988 CATAGTGGGCTTGGAGGTGCATATTATTTTAGGAACAAAAGGGGTGAGAGTGTTGCGATT 1047
||||| |||||||||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 1063 CATAGCGGGCTTGGAGGTGCTTACTATTTTAGGAACAAAAGGGGTGAGAGTGTTGCCATT 1122
Query 1048 GTCAAGCCGACAGATGAAGAGCCGTTTGCACCTAACAATCCTAAAGGCTTTGTTGGGAAA 1107
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1123 GTCAAGCCGACGGATGAAGAGCCGTTTGCACCTAACAACCCTAAAGGCTTTGTTGGGAAA 1182
Query 1108 GCCCTTGGGCAGCCTGGATTAAAGTCTTCGGTGCGAGTTGGGGAAACCGGGTTTAGAGAA 1167
||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1183 GCCCTTGGGCAACCTGGATTGAAGTCTTCGGTGCGAGTTGGGGAAACGGGGTTTAGAGAA 1242
Query 1168 GTTGCTGCTTATCTTCTTGATTATGGTCGCTTTGCTAATGTCCCTCCCACTGCTCTTGTG 1227
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1243 GTTGCTGCTTATCTTCTTGATTATGGTCGCTTTGCTAATGTCCCTCCAACTGCTCTTGTG 1302
Query 1228 AAGATAACTCATTCTGTATTCAATGTCAATGATGGGGTGAAGGGGAACAAGCCTCGGGAG 1287
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1303 AAGATAACTCATTCTGTATTCAATGTCAACGATGGGGTGAAGGGGAACAAGCCTCGGGAG 1362
Query 1288 AAGAAGCTGGTTAATAAGATTGCTTCTTTCCAGAAGTTTGTGGCTCATGATTTCGATGCA 1347
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363 AAGAAGCTGGTTAGTAAGATTGCTTCTTTCCAGAAGTTTGTGGCTCATGATTTCGATGCA 1422
Query 1348 AGTGATCATGGTACTTCAAGCTTCCCTGTAGCTTCTGTGCACCGCATTGGTATATTGGAC 1407
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1423 AGTGATCATGGTACTTCAAGCTTCCCTGTAACTTCTGTGCACCGCATTGGTATTTTGGAC 1482
Query 1408 ATAAGGATCTTCAACACAGATCGTCATGGTGGGAATCTTTTGGTGAAGAAGCTTGATGGG 1467
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1483 ATAAGGATCTTCAACACAGACCGTCATGGTGGGAATCTTTTGGTGAAGAAGCTCGATGGA 1542
Query 1468 GTCGGAATGTTTGGTCAAGTGGAGCTTATTCCAATTGACCATGGTCTCTGCCTGCCAGAA 1527
|| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1543 GTTGGTATGTTTGGTCAAGTGGAGCTTATTCCAATAGACCATGGCCTCTGCCTGCCAGAA 1602
Query 1528 ACACTTGAGGATCCTTATTTTGAGTGGATTCATTGGCCTCAGGCATCATTACCATTCTCT 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1603 ACACTTGAGGATCCTTATTTTGAGTGGATTCATTGGCCTCAGGCATCATTACCATTCTCT 1662
Query 1588 GATGAAGAGCTTGACTACATACAAAGTCTTGATCCATTGGAAGACTGTAACATGCTTAGA 1647
||||||||| |||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 1663 GATGAAGAGGTTGACTACATACAAAGTCTTGATCCAGTGAAAGACTGTGACATGCTTAGA 1722
Query 1648 AGAGAACTTCCAATGATTAGAGAGGCGTGTCTTCGGGTTCTTGTTCTCTGTACTATTTTT 1707
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1723 AGGGAACTTCCAATGATTAGAGAGGCGTGTCTTCGGGTTCTTGTTCTCTGTACTATTTTC 1782
Query 1708 CTCAAAGAAGCTGCTTCTTATGGGCTGTGTCTTGCTGAGATTGGCGAGATGATGACTCGG 1767
|| ||||||||| || | ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1783 CTTAAAGAAGCTTCTGCATATGGTCTGTGTCTTGCCGAGATTGGCGAGATGATGACTCGG 1842
Query 1768 GAATTTCGACCAGGAGAAGAAGAGCCAAGTGAACTGGAGGTTGTGTGTATTGAAGCCAAG 1827
|||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1843 GAATTTCGTCCTGGAGAAGAGGAGCCAAGTGAACTGGAGGTTGTGTGTATTGAAGCCAAG 1902
Query 1828 AGATCAGTCACTGAACGCGATGTTTTCTCTCCAAGGTCAGATGTAGTAGGAGAAGCAGAG 1887
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1903 AGATCAGTCACTGAACGAGATGTTTTCTCTCCAAGGTCAGATGTAGTAGGAGAAGCAGAG 1962
Query 1888 TTTCAGTTCGATCTAGACTGTGATGATTTAGAATCAGTCTACAGTTCCAAGATACAACTA 1947
|||||||| |||||||||||||||||||| || |||||||||||||| ||||||||||||
Sbjct 1963 TTTCAGTTTGATCTAGACTGTGATGATTTGGAGTCAGTCTACAGTTCTAAGATACAACTA 2022
Query 1948 ACCGATGACTACTTCACCAAAAACCCTTTTTCAAACGGACGTTCTTCACTCGGgaagctt 2007
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 2023 ACCGATGACTATTTCACCAAAAACCCTTTTTCAAATGGACGTTCTTCGCTCGGGAAGCTT 2082
Query 2008 gaagaaagcatcaaggaagaagaagaagatgatgaagaagaagaGGACAAAACTGAAAAT 2067
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2083 GAAGAAAGCATCAAGGAAGAAGAAGAAGATGAAGAAGAAGAAGAGGACAAAACTGAAAAT 2142
Query 2068 GCTGTCCCTATGATCATTATGAAAGACAGtttttttAGTTCAGCTGCTTTTCATGACAAA 2127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2143 ACTGTCCCTATGATCATTATGAAAGACAGTTTTTTTAGTTCAGCTGCTTTTCATGACAAG 2202
Query 2128 GCTCCATCTCTTTCAAAGCTTTCGACTTCAATGAAGAACACACATCTTAGCGACACAACA 2187
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct 2203 GCTCCATCTCTTTCAAAGCTTTCCACTTCAATGAAGAACACACATCTTAGTGACACGACA 2262
Query 2188 CGTAAACACCCAAAACCCTTAACCAGAGGCAAATCCGAGAACACATCGTCTGGTCACAAA 2247
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2263 CGTAAAAACCCAAAACCCTTAACCAGAGGCAAATCCGAGAACACATCGTCTGGTCACAAA 2322
Query 2248 AGCGCAAACGAACAGCTTCCAGTGAGTGCAAGCTTTGTGAAAGTAGCAGACATGAAAGAA 2307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2323 AGCGCAAACGAACAGCTTCCAGTGAGTGCAAGCTTTGTGAAAGTAGCAGACATGAAAGAA 2382
Query 2308 GACGAGTGGGTTCTCTTCCTAGAGAGGTTCCAAGAGTTACTTGAACCGGCTTTCGCAAAA 2367
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 2383 GACGAGTGGGTTCTCTTCCTCGAGAGGTTCCAAGAGTTACTTGGACCGGCTTTCGCAAAA 2442
Query 2368 CGCAAAACCGCAACGTTGAGTAAGAGACAGAGACTTGGCACTTCATGCCAGTTTTGAGAG 2427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CGCAAAACCGCAACGTTGAGTAAGAGACAGAGACTTGGCACTTCATGCCAGTTTTGAGAG 2502
Query 2428 TCGTATAGTAAAAAGTAAAACATCTCGA-G--AGA-GAGAAAGT-T--A--AAA-----G 2473
||||||||||||||||||||| || || | | | |||| ||| | | ||| |
Sbjct 2503 TCGTATAGTAAAAAGTAAAAC-TCGAGAAGTTAAAAGAGACAGTATGGAGTAAAAAACTG 2561
Query 2474 A-GACAGCTTC---AGTTCTATGGTAGTAAAAAA-TAGTAGTTACTTTTGGAAGGTTTGG 2528
| ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2562 AAGACTTCTTCTTCAGTTCTATGGTAGTAAAAAACTAGTAGTTACTTTTGGAAGGTTTGG 2621
Query 2529 CTTATGACAAGCGACAAGGTGAAGAAAAGGGGTTTTGttt-ttt-ttttt--aactgttt 2584
||||||||||||||| |||||||||||||||||||||||| ||| ||||| ||||||||
Sbjct 2622 CTTATGACAAGCGACGAGGTGAAGAAAAGGGGTTTTGTTTGTTTGTTTTTTTAACTGTTT 2681
Query 2585 tgtaaatatttcttttacct-ctctttgtgatcttctttgtttgtttgtttg-ttttttt 2642
|||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||
Sbjct 2682 TGTAAATATTTCTTTTAC-TACTCTTTGTGATCTTCTTTGTTTGTTTGTTTGGTTTTTTT 2740
Query 2643 ---gccccttt-atcacctttctcttgtttttttctttgGTATGTCCTTGTGGCTTGGCC 2698
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2741 TTTGCCCCTTTTATCACCTT-CTCTTGTTTTTTTCTTTGGTATGTCCTTGTGGCTTGGCC 2799
Query 2699 TTGTCCCATAAATAATATTAGTCTTCTTTCACTTTTTGGTGTGATCGTTCAT 2750
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2800 TTGTCCCATAAATAATATTAGTCTTCTTTCACTTTTTGGTGTGGTCGTTCAT 2851
Score = 409 bits (221), Expect = 9e-113
Identities = 303/338 (90%), Gaps = 24/338 (7%)
Strand=Plus/Plus
Query 11 ACA-acacacacacacaG--AG--AAAGAGGCGGCTAGGGATCAGAGAGTGGttccttca 65
||| ||||||||| | || || ||||||||||||||||||||||||||||||||||||
Sbjct 21 ACACACACACACAGAGAGCAAGCAAAAGAGGCGGCTAGGGATCAGAGAGTGGTTCCTTCA 80
Query 66 ctgaaagttttcttcttttg-attctcttcttctccttcagattccttgcctcttcttta 124
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 81 CTGAAAGTTT-CTTCTTTTTCATTCTCTTCTTCTCCTTCAGATTCCTTGCCTCTTCTTCA 139
Query 125 agattctccttctcttccATGTGCGTTTCTGTGCTTCTGAAGACGA---TGATGATGACG 181
|||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||| |
Sbjct 140 AGATTCTCCT-CTCTTCCATGTGCGTTTCTGTGCTTTTGAAGACGACGATGATGATGATG 198
Query 182 -T--CTTTGA-ATTGAA-CCAAAATTCGTC-CCTACGATTGTTTCGTCTGAGTTTTGATT 235
| |||| | |||||| ||||| |||||| || ||||||||||| ||||||||||||||
Sbjct 199 ATGTCTTT-ATATTGAAACCAAA-TTCGTCTCC-ACGATTGTTTCTTCTGAGTTTTGATT 255
Query 236 T--CAGATCTCGCttttttttCGATTTCTTCAATCATCATGGCTTACCTGATGTAGTAAT 293
| |||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 256 TTTCAGATCTCGCTTCTTTTCCGATTTGTTCAATCATCATGGCTTACCTGATGTAGTAAT 315
Query 294 TTGGGAATCAAATTCATTCTCAAAGCTCGAGTTTTTAT 331
| |||| |||||||||||| ||||||||||||||||||
Sbjct 316 T-GGGA-TCAAATTCATTCACAAAGCTCGAGTTTTTAT 351
> AT1G13640.1 | Symbols: | Phosphatidylinositol 3- and 4-kinase
family protein | chr1:4677027-4679812 REVERSE LENGTH=2489
Length=2489
Score = 1375 bits (744), Expect = 0.0
Identities = 1301/1561 (83%), Gaps = 73/1561 (5%)
Strand=Plus/Plus
Query 540 TGGGGCTA-ATAAGATGGAAGGGAAGCAGCATCATAAACATCAGCAT-CTTCAG-AGGCA 596
|||||||| | ||||||||||||||||| || |||| || || | | |||||| | ||
Sbjct 416 TGGGGCTAGA-AAGATGGAAGGGAAGCA--AT-ATAAGCACCATC-TGCTTCAGCA-ACA 469
Query 597 ATCAT-C-GGG-G-AGGCGGGTTTTCGTGCAAACTGAAACTGGTTGTGTTTTGGGGA-TG 651
|| | | ||| | || || || ||||||||||| || ||||| ||||| || |||| |
Sbjct 470 GTC-TACAGGGAGAAGACGTGTGTTCGTGCAAACCGATACTGGCTGTGTGTT-GGGAGTT 527
Query 652 GAGTTGGATCGTAGTGATAATGTTCATACTGTTAA-AAGGAGGCTTCAGATTGC-TCTTA 709
||||||||||||| ||| |||||||||||||| || || |||||||||||||| | |||
Sbjct 528 GAGTTGGATCGTAATGACAATGTTCATACTGTGAAGAA-AAGGCTTCAGATTGCGT-TTA 585
Query 710 A-TTTCCCGACTGAGGAAAGTTCTTTGA-CTTATGGTGATATGGTGTTGACGAATGATTT 767
| ||| || ||||||||||| ||||||| ||| ||| ||||||||||||| |||||| ||
Sbjct 586 ACTTT-CCTACTGAGGAAAGCTCTTTGACCTT-TGGGGATATGGTGTTGAAGAATGACTT 643
Query 768 GAGTGCTGTGAGGAATGATTCTCCGCTTCTGCTGAGA-CGGAATTTTATGCATAGAAGCT 826
|||||||||||||||||||||||||||||| || | | || || || ||||| |||||||
Sbjct 644 GAGTGCTGTGAGGAATGATTCTCCGCTTCT-CTTAAAGCGTAACTTAATGCACAGAAGCT 702
Query 827 CGTCTACTCCTTGTCTTTCGCCTACTGGGAGGGATTTGCAACA-GAAAGACCGAAGTGGT 885
| |||||||| |||||||| |||||||||| ||| ||| | | |||||| |||||||||
Sbjct 703 CTTCTACTCCGTGTCTTTCACCTACTGGGAATGATCTGC-AGAGGAAAGATCGAAGTGGT 761
Query 886 CCTATTGAGATA-TTAGGCCATTCGGATTGCTTTTC-GAT-TGTT-AAACATATGGTGAA 941
|||||||||||| ||| | || ||| || ||||| | | | || || || | | |||
Sbjct 762 CCTATTGAGATACTTA-GTCACTCGCCCTG-TTTTCTG-TCT-TTGAAGCAAACAGCGAA 817
Query 942 GGATATTGTTAAGGCGATGAAGATGGGTGTTGAACCGCTTCCTGTTCATAGTGGGCTTGG 1001
|| |||||||||||||||||||||||||||||||| | |||||| || ||||||||||
Sbjct 818 TGACATTGTTAAGGCGATGAAGATGGGTGTTGAACCAATCCCTGTTAATGGTGGGCTTGG 877
Query 1002 AGGTGCATATTATTTTAGGAAC-AAAAGGGGTGAGAGTGTTGCGATTGTCAAGCCGACAG 1060
||| ||||| ||||||||| | ||||||| | | |||||||| ||||||||||| || |
Sbjct 878 AGGGGCATACTATTTTAGGGATGAAAAGGG-TCAAAGTGTTGCTATTGTCAAGCCTACGG 936
Query 1061 ATGAAGAGCCGTTTGCACCTAACAATCCTAAAGGCTTTGTTGGGAAAGCCCTTGGGCAGC 1120
|||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||
Sbjct 937 ATGAAGAGCCGTTTGCCCCTAACAATCCTAAAGGCTTCGTAGGGAAAGCGCTTGGGCAGC 996
Query 1121 CTGGATTAAAGTCTTCGGTGCGAGTTGGGGAAACCGGGTTTAGAGAAGTTGCTGCTTATC 1180
|||| |||||| |||| ||||| |||||||||||||||||||||||||||||||| || |
Sbjct 997 CTGGTTTAAAGCCTTCTGTGCGGGTTGGGGAAACCGGGTTTAGAGAAGTTGCTGCATACC 1056
Query 1181 TTCTTGATTATGGTCGCTTTGCTAATGTCCCTCCCACTGCTCTTGTGAAGATAACTCATT 1240
|||||||||||| || |||||||||||| ||||| || ||||||||||||||||| || |
Sbjct 1057 TTCTTGATTATGATCACTTTGCTAATGTTCCTCCTACGGCTCTTGTGAAGATAACACACT 1116
Query 1241 CTGTATTCAATGTCAATGATGGGGTGAAGGGGAACAAGCCTCG-G-GA-GAAGAAGCTGG 1297
|||| ||||||||||||||||| || | |||||||| |||| | || |||||||||||
Sbjct 1117 CTGTTTTCAATGTCAATGATGGAATGGATGGGAACAAATCTCGTGAGAAGAAGAAGCTGG 1176
Query 1298 TTA--AT-AAGATTGCTTCTTTCCAGAAGTTTGTGGCTCATGATTTCGATGCAAGTGATC 1354
| | | ||||||||||| |||||||||||||| |||||||||| ||||| |||||||
Sbjct 1177 TCAGCAGCAAGATTGCTTCGTTCCAGAAGTTTGTACCTCATGATTTTGATGCCAGTGATC 1236
Query 1355 ATGGTACTTCAAGCTTCCCTGTAGCTTCTGTGCACCGCATTGGTATATTGGACATAAGGA 1414
| || ||||||||||||||||| |||||||||||||||||||| || |||||||||||||
Sbjct 1237 ACGGGACTTCAAGCTTCCCTGTCGCTTCTGTGCACCGCATTGGGATTTTGGACATAAGGA 1296
Query 1415 T-CTTCAACACAGATCGTCATGGTGGGAATCTTTTGGTGAAGAAGCTTGATG--GG-G-T 1469
| || ||||||||| || |||||||| ||||||||||||||||||||||||| || | |
Sbjct 1297 TTCT-CAACACAGACCGGCATGGTGGAAATCTTTTGGTGAAGAAGCTTGATGATGGTGGT 1355
Query 1470 C--GGAATGTTTGGTCAAGTGGAGCTTATTCCAATTGACCATGGTCTCTGCCTGCCAGAA 1527
|| | ||||||||||||||||||||||||||| || |||||||| ||| | ||||||
Sbjct 1356 GTTGGGAGGTTTGGTCAAGTGGAGCTTATTCCAATAGATCATGGTCTTTGCTTACCAGAA 1415
Query 1528 ACACTTGAGGATCCTTATTTTGAGTGGATTCATTGGCCTCAGGCATCATTACCATTCTCT 1587
||||| || |||||||| || || |||||||||||||||||||| ||| |||| ||||||
Sbjct 1416 ACACTCGAAGATCCTTACTTCGAATGGATTCATTGGCCTCAGGCTTCAATACCTTTCTCT 1475
Query 1588 GATGAAGAGCTTGACTACATACAAAGTCTTGATCCATTGGAAGACTGT-AACATGCTTAG 1646
|| ||||| ||||||||||||||||||||||||||| || |||| ||| || |||||| |
Sbjct 1476 GAAGAAGAACTTGACTACATACAAAGTCTTGATCCAGTGAAAGATTGTGAA-ATGCTTCG 1534
Query 1647 AAGAGAACTTCCAATGATTAGAGAGGCGTGTCTTC-GGGTTCTTGTTCTCTGTACTATTT 1705
|||||| ||||| |||||| ||||||| ||||| | ||||||| ||||||||||| |||
Sbjct 1535 AAGAGAGCTTCCGATGATTCGAGAGGCTTGTCT-CAGGGTTCTAGTTCTCTGTACCGTTT 1593
Query 1706 TTCTCAAAGAAGCTGCT-TCTTATGGGCTGTGTCTTGCTGAGATTGGCGAGATGATGACT 1764
| || |||||||||||| | || ||| || |||||||| ||||| || ||||||||||||
Sbjct 1594 TCCTTAAAGAAGCTGCTGTTTT-TGGACTTTGTCTTGCAGAGATCGGTGAGATGATGACT 1652
Query 1765 CGGGAATTTCGACCAGGAGAAGAAGAGCCAAGTGAACTGGAGGTTGT-GTGTATTGAAGC 1823
|| |||||||| |||||||||| || ||||||||||| || | || |||||| |||||
Sbjct 1653 CGAGAATTTCGTGCAGGAGAAGAGGAACCAAGTGAACTAGAAAT-GTTGTGTATCGAAGC 1711
Query 1824 CAAGAGATCAGTCACTGAACGCGATGTTTTCTCTCC-AAGGTCAGATGTAGTAGGAGA-A 1881
|||||||| | |||||||| || ||||| ||||| ||| ||||||| || |||||| |
Sbjct 1712 CAAGAGATTAACCACTGAACAAGACGTTTTGTCTCCCAAG-TCAGATGGAGAAGGAGAGA 1770
Query 1882 GCAGAGTTTCAGTTCGATCTAGACTGTGATGATTTAGAATCAGTCTACAGTTCCAAGATA 1941
||||||||||||| ||| |||||| |||| |||| || || || | || ||| |
Sbjct 1771 -CAGAGTTTCAGTTTGATATAGACTACAATGAGCTAGACTCGGTTTATGGCTCTGAGACA 1829
Query 1942 CAACTAACCGATGACTACTTCACCAAAAACCCTTTTTCAAACGGACGTTCTTCACTCGG- 2000
|| | ||||||| | |||| |||| ||||| ||||||||||||||||||||||| ||
Sbjct 1830 GAA--A-CCGATGAGTTCTTCGCCAAGAACCCATTTTCAAACGGACGTTCTTCACTTGGA 1886
Query 2001 gaagcttgaagaaagcatcaaggaagaagaagaagatgatgaagaagaagaGGACAAAAC 2060
|| ||| |||| ||||| ||||||||||||||||| ||||| | |||| ||||||
Sbjct 1887 GA-GCTCAAAGAGAGCATTGCTGAAGAAGAAGAAGATGACGAAGA-G--GAGG-CAAAAC 1941
Query 2061 T 2061
|
Sbjct 1942 T 1942
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136604585789
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5