BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484303
Length=798
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04020.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 1262 0.0
AT2G03980.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 708 0.0
> AT2G04020.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr2:1274427-1275524 FORWARD LENGTH=786
Length=786
Score = 1262 bits (683), Expect = 0.0
Identities = 757/791 (96%), Gaps = 11/791 (1%)
Strand=Plus/Plus
Query 1 ATGGGTTTGCCTT-GTTCTCTGA-AGTCATACCTTCTTTTGCTCCTCCTGTCTTTTCTCA 58
||||||||||||| | ||||| | ||||||||||||||||| ||||||| ||||||||||
Sbjct 1 ATGGGTTTGCCTTCG-TCTCT-AGAGTCATACCTTCTTTTGATCCTCCTCTCTTTTCTCA 58
Query 59 ATTTCTCCATAATTTACTCATCGAAG-C--CAAAAGAAGAAGCCGTGCTTTTTGGCGGGA 115
|| |||||| || |||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 59 ATGTCTCCACGATATACTCATCGAAGCCATCAAAAGAAGAAGCCGTGCTTTTTGGCGGGA 118
Query 116 ACTTTCCGGCTTTTTATGTTATTGGAGATTCATTGGTTGATCCAGGAAACAATAATCATC 175
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 119 ACTTTCCGGCTTTTTATGTTATTGGAGATTCACTGGTTGATCCAGGAAACAATAACCATC 178
Query 176 TTCCGACAATGATCAGAGCGAATTATCCACCTTATGGTTCTGACTTTGAAGGAGGCAAAG 235
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 TTCCGACGATGATTAGAGCGAATTATCCACCTTATGGTTCTGACTTTGAAGGAGGCAAAG 238
Query 236 CTACCGGACGTTTTAGTAATGGCAAAACAATTGCTGATTACATTGCTATTTATTATAAGC 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 CTACCGGACGTTTTAGTAATGGCAAAACAATTGCTGATTACATTGCTATTTATTATAAGC 298
Query 296 TTCCTTTGGTTCCTGCTTATTTGGGATTATCTGAAGACCGGAAGGACACTATCTCAACTG 355
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 299 TTCCTTTGGTTCCTGCTTATTTGGGATTATCTGATGACCGGAAGGACACTATCTCAACTG 358
Query 356 GTATGAACTATGCTTCTGCTGGCTGTGGGATTCTTCGTCTCACAGGAAAGATAGCGGGAA 415
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 359 GTATGAACTATGCTTCTGCTGGCTGTGGGATTCGTCGTCTCACAGGAAAGATAGCGGGAA 418
Query 416 AATGTCTCTCGTTGAGCAAACAAGTCGATATGTTCGAAGAAACCATCGAAAAGCATTTGA 475
||||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||||||
Sbjct 419 AATGTCTATCGTTGAGCAAACAAGTCGATTTGTTCGAGGAAACCATTGAAAAGCATTTGA 478
Query 476 AGACGAATTTCAAAACGCCATATGAGCTGAGAGAACACTTGGCTCACTCGTTGTTCATGA 535
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 479 AGACGAATTTCAAAACGCCATATGAGTTGAGAGAACACTTGGCTCACTCGTTGTTCATGA 538
Query 536 CCGTGATTGGGGTTAACGACTATGCATTCTTCTATACTAGGTTAACCGATGCGAATGATT 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 CCGTGATTGGGGTTAACGACTATGCATTCTTCTATACTAGGTTAACCGATGCGAATGATT 598
Query 596 TCGCAGAC-AAGCTTCTTCATAAGTTCTTGaaaaaaaTAGAGAAATTGCATAAGTTAGGA 654
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TCGCAGACGAA-CTTCTTCATAAGTTCTTGAAAAAAATAGAGAAATTGCATAAGTTAGGA 657
Query 655 GCAAGAAAGTTCTTCATCAACAACATTAAACCATTAGGATGTTACCCAAATATGGTAGCT 714
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 658 GCAAGAAAGTTCTTCATCAACAACATTAAACCATTAGGTTGTTACCCAAATATAGTAGCT 717
Query 715 AAGACGGTACCACGCGGAAGCTGCAACGAACGTGTAAACCTTGCTATAAGCATTTACAAC 774
|||||||||||||| |||||| | | ||||||| ||||||||||||||||||||||||||
Sbjct 718 AAGACGGTACCACGAGGAAGCCG-A-CGAACGTATAAACCTTGCTATAAGCATTTACAAC 775
Query 775 GATAAGCTTAG 785
|| ||||||||
Sbjct 776 GAAAAGCTTAG 786
> AT2G03980.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr2:1259199-1262552 FORWARD LENGTH=1420
Length=1420
Score = 708 bits (383), Expect = 0.0
Identities = 671/807 (83%), Gaps = 32/807 (4%)
Strand=Plus/Plus
Query 1 ATGGGTTTGCCTTGTTCTCTGAAGTCATACCTTCTTTTGCTCCTCCTGTCTTTTCTCAAT 60
|||| ||||| || || ||| || |||||| |||||||||||||||| | | |||| |||
Sbjct 173 ATGGATTTGCATTCTTGTCTAAACTCATACTTTCTTTTGCTCCTCCTCTGTCTTCTTAAT 232
Query 61 -TTCTCCATAATTTACTCATCGAAGCCA--A-AAGAAGAAGCCGTGCTTTTTGGCGGGAA 116
|| ||| ||| ||||| |||||||| | || ||||| | |||||||||||||| ||
Sbjct 233 ATT-ACCACCATTAACTCAACGAAGCCATTAGAACAAGAAACAGTGCTTTTTGGCGGCAA 291
Query 117 CTTTCCGGCTTTTTATGTTATTGGAGATTCATTGGTTGATCCAGGAAACAATAATCATCT 176
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 292 CTTTCCGGCTTTTTATGTTATTGGAGATTCATTGGTTGATTCAGGAAACAATAATCATCT 351
Query 177 TCCGACAATGATCAGAGCGAATTATCCACCTTATGGTTCTGACTTTGAAGGAGGCAAAGC 236
| | || ||| ||| | |||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 352 TACAACGATGGTCAAATCGAATTTTCCACCTTATGGTTCGGACTTTGAAGGTGGCAAAGC 411
Query 237 TACCGGACGTTTTAGTAATGGCAAAACAATTGCTGATTACATTGCTATTTATTATAAG-C 295
||||| ||||| || |||||||||||||||||||||||||||||||| || ||| | |
Sbjct 412 CACCGGCCGTTTCAGCAATGGCAAAACAATTGCTGATTACATTGCTATCTACTAT-GGTC 470
Query 296 TTCCTTTGGTTCCTGCTTATTTGGGATTATCTGAAGACCG-GAAGGACACTATCTCAACT 354
|||||||||||||||||||||||||||||||| |||| | ||| | | ||||||||||
Sbjct 471 TTCCTTTGGTTCCTGCTTATTTGGGATTATCTCAAGA-AGAAAAGAATAGTATCTCAACT 529
Query 355 GGTATGAACTATGCTTCTGCTGGCTGTGGGATTCTTCGTCTCACAGGAAAG-ATAGCGGG 413
||||| ||||||||||||||||||||||||||||||| || ||||||| | | | ||
Sbjct 530 GGTATTAACTATGCTTCTGCTGGCTGTGGGATTCTTCCTCAGACAGGAAGGCA-AATAGG 588
Query 414 AAAATGTCTCTCGTTGAGCAAACAAGTCGATATGTTCGAAGAAACCATCGA-AAAGC-AT 471
|| |||||||||||| || ||||||||||||||| | || |||||| | ||| | ||
Sbjct 589 AACATGTCTCTCGTTAAGTGTCCAAGTCGATATGTTCCAGGAGACCATC-ACAAA-CAAT 646
Query 472 TTGAAGACGAATTTCAA-AACGCCATATGAGCTGAGAGAACACTTGGCTCACTCGTTGTT 530
|||||| ||| ||||| || | | ||||| | |||||||||||| | ||||||||
Sbjct 647 CTGAAGAAGAACTTCAAGAA-G---TCCGAGCTCCGTGAACACTTGGCTGAATCGTTGTT 702
Query 531 CATGACCGTGATTGGGGTTAACGACTATGCATTCTTCTATACTAG-GTTAACCGATGCGA 589
|||| || ||||||||||||||||| ||||||| | || | | |||||||||||
Sbjct 703 TATGATCGCCATTGGGGTTAACGACTACACATTCTTATTTAAT-GAAACAACCGATGCGA 761
Query 590 ATGA-TTTCGCAGACAAGCTTCTTCATAAGTT-CTTGaaaaaaaTAGAGAA-ATTGCATA 646
|||| ||| ||| |||||||||||||| | || |||| ||||||| || |||||| |
Sbjct 762 ATGAGTTT-GCAAACAAGCTTCTTCATGA-TTACTTGCTTCAAATAGA-AAGATTGCACA 818
Query 647 AGTTAGGAGCAAGAAAGTTCTTCATCAACAACATTAAACCATTAGGATGTTACCCAAATA 706
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 AGTTAGGAGCAAGGAAGTTCTTCATCAACAACATTAAACCATTAGGATGTTACCCAAATG 878
Query 707 TGGTAGCTAAGACGGTACCACGCGGAAGCTGCAACGAA-CGTGTAAACCTTGCTATAAGC 765
| ||||||||||| || ||||| |||||||||||||| | | | ||| |||| | |||
Sbjct 879 TTGTAGCTAAGACCGTGCCACGTGGAAGCTGCAACGATGCTT-TGAACTTTGCGGTCAGC 937
Query 766 ATTTACAACGA-TAAGCTTAGAAGAAG 791
|||| |||| | ||||||||||| |||
Sbjct 938 ATTTTCAAC-ACTAAGCTTAGAAAAAG 963
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38830995631
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5