BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484318
Length=1636
Score E
Sequences producing significant alignments: (Bits) Value
AT3G25585.2 | Symbols: AAPT2, ATAAPT2 | aminoalcoholphosphotran... 2423 0.0
AT1G13560.1 | Symbols: AAPT1, ATAAPT1 | aminoalcoholphosphotran... 1155 0.0
> AT3G25585.2 | Symbols: AAPT2, ATAAPT2 | aminoalcoholphosphotransferase
| chr3:9295373-9298746 FORWARD LENGTH=1711
Length=1711
Score = 2423 bits (1312), Expect = 0.0
Identities = 1481/1559 (95%), Gaps = 25/1559 (2%)
Strand=Plus/Plus
Query 87 ctctctctct-ctctGCTGATTCTTCTCTGATTCTTACCCTCCTCGTCGTCGTCTTCGGC 145
|||||||||| ||||||||||||||| |||| |||| |||||||| |||||||||||||
Sbjct 47 CTCTCTCTCTCCTCTGCTGATTCTTCGCTGACTCTT-GCCTCCTCGACGTCGTCTTCGGC 105
Query 146 TTTGTAGCATCTCGCCGAAGCGTCGTTGATTTGAGAGAGACCCAATTTGGATTTTTACaa 205
||||||||||||||||||| | |||||||||||||||||||||||||||||| || |
Sbjct 106 TTTGTAGCATCTCGCCGAA--G-CGTTGATTTGAGAGAGACCCAATTTGGATTGTT---A 159
Query 206 aaaaaTGGGTTACATAGGAGCTCATGGTGTAGCTGCTCTTAAGAAACACAAATACAGTGG 265
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 160 GAAAATGGGTTACATAGGAGCTCATGGTGTAGCTGCTCTTAAGAAACACAAATACAGTGG 219
Query 266 TGTTGATCATTCTTATCTTGCCAAATATGTTCTCCAACCTTTTTGGAACCGTTTTGTCAA 325
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 TGTTGATCACTCTTATCTTGCCAAATATGTTCTCCAACCTTTTTGGAACCGTTTTGTCAA 279
Query 326 AATCTTCCCTCTTTGGATGCCACCCAACATGATAACACTTATGGGGTTCATGTTTCTTCT 385
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 280 AATCTTCCCTCTATGGATGCCCCCCAACATGATAACACTTATGGGGTTCATGTTTCTTCT 339
Query 386 CACATCTGCTCTGTTAGGCTATATATACTCACCTAAGTTGGATTCTCCTCCTCCTCGATG 445
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 340 CACATCTGCTCTCTTAGGCTATATATACTCACCTAAGTTGGATTCTCCACCTCCTCGATG 399
Query 446 GGTCCATTTTGCACACGGCTTACTTCTATTTTTGTATCAGACATTTGATGCGGTTGATGG 505
|||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 400 GGTCCACTTTGCACACGGCTTACTTCTGTTTTTATATCAGACATTTGATGCGGTTGATGG 459
Query 506 GAAGCAAGCACGAAGAACAAATTCATCTAGCCCACTAGGAGAGCTTTTTGACCATGGTTG 565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 460 GAAGCAAGCACGAAGAACAAATTCATCTAGCCCACTAGGAGAGCTTTTTGACCATGGTTG 519
Query 566 CGATGCTCTTGGTTGTGCGTTAGAAACAATGGCATATGGGAGCACTGCAATGTGTGGAAG 625
|||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 520 CGATGCACTTGGCTGTGCGTTAGAAACAATGGCATATGGGAGTACTGCTATGTGTGGAAG 579
Query 626 AGATACTTTCTGGTTTTGGGTTATTTCAGCTGTTCCATTTTTTGGAGCAACATGGGAACA 685
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 580 AGATACTTTCTGGTTTTGGGTTATTTCTGCTGTTCCATTTTTTGGAGCAACATGGGAACA 639
Query 686 CTATTTTACCAATACGCTTACTCTTCCGGTAGTCAATGGTCCTACAGAAGGTCTTGCACT 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 640 CTATTTTACCAATACGCTTACTCTTCCGGTAGTCAATGGTCCTACAGAAGGTCTTGCACT 699
Query 746 TATATACTGTGGCCATTTCTTCACAGCCATTGTTGGTGCCGAGTGGTGGGCTCAGCCGTT 805
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 700 TATATACTGTGGCCATTTCTTCACAGCCATTGTTGGTGCGGAGTGGTGGGCTCAGCCGTT 759
Query 806 TGGGAAGTCGATTCCTTTGTTTAGTTGGGTTCCGTTTTTGAACGAGATGCAAATGTCCAG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 TGGGAAGTCGATTCCTTTGTTTAGTTGGGTTCCGTTTTTGAACGAGATGCAAATGTCCAG 819
Query 866 AATAATACTATTCACGATGATATTCTTCGCTGTTATACCAACCCTTGCAATCAACACGTC 925
||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 820 AATAATACTATTCTCCATGATTTTCTTTGCTGTTATACCAACCCTTGCAATCAACACGTC 879
Query 926 TAATGTTTACAAAGTTGTACAGTCAAGAAAAGGAAGTATGCTTCTAGCATTAGCTATGCT 985
||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 880 TAATGTTTACAAAGTTGTACATTCAAGAAATGGAAGCATGCTTCTAGCATTAGCTATGCT 939
Query 986 ATATCCCTTAGCCACGTTAATTGCAGGAGTTTTGATTTGGGATTACTTGTCTCCAATTGA 1045
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 940 ATATCCCTTAGTCACGTTAATTGCAGGAGTTCTGATTTGGGATTACTTGTCTCCAATTGA 999
Query 1046 TCTCATAAGAAACTACCCTCACTTAGTTGTATTGGGAACTGGTCTTGCATTTGGATTCCT 1105
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1000 TCTCATAAGAAACTACCCTCACTTAGTTGTGTTGGGAACTGGTCTTGCATTTGGATTCCT 1059
Query 1106 TGTGGGAAGAATGATTCTAGCTCACTTATGTGACGAACCAAAAGGATTAAAAACAAACAT 1165
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1060 TGTGGGAAGAATGATTCTAGCTCACTTATGTGACGAACCAAAAGGATTGAAAACAAACAT 1119
Query 1166 GTGTATGTCATTGCTTTACCTTCCCTTTGCACTAGCAAATGCTCTAACCGCTAGACTCAA 1225
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1120 GTGTATGTCACTGCTTTACCTTCCATTTGCACTAGCAAATGCTCTAACCGCTAGACTCAA 1179
Query 1226 TGACGGGGTTCCTCTTGTGGACGAGTTTTGGGTCCTTCTTGGTTATTGTATATTCACATT 1285
|||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct 1180 CGACGGGGTTCCTCTTGTGGATGAGTTTTGGGTTCTTCTTGGATATTGTATATTCACATT 1239
Query 1286 GTCACTATATGCGCATTTTGCAACTTCAGTCATTCATGAGATCACAACTGCACTTGGAAT 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 GTCACTATATGCGCATTTTGCAACTTCAGTCATTCATGAGATCACAACTGCACTTGGAAT 1299
Query 1346 CTACTGCTTCAGGATTACTCGTAAAGAAGCTTGAAGAAG-AACAATGTGATTGAAATTTT 1404
||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||
Sbjct 1300 CTACTGCTTCAGGATTACTCGGAAAGAAGCTTGAAGAAACAA-AATGTGATTGAAATTTT 1358
Query 1405 TATCATTTaaaaaaaaaaaaaCAAATCTTAAGCAAGAAGAAAATTGCAAATCCCAACACG 1464
||| || | || ||||| ||||||||||| |||| |||| ||||||||||||||||
Sbjct 1359 TAT--TT-ATAAGAAAAAG--CAAATCTTAAGGGAGAAAAAAAATGCAAATCCCAACACG 1413
Query 1465 AATCTGAATATTTTGTTA-TTGGAATTAAAAACGATTGA-TCGATATGCTTTTGGATGTA 1522
|||||||||||||||||| ||||||||||||| |||||| | ||||||||||||||||||
Sbjct 1414 AATCTGAATATTTTGTTACTTGGAATTAAAAATGATTGACT-GATATGCTTTTGGATGTA 1472
Query 1523 TACTCATTAATGttttttatttt--tgtttgtttttCTTGTTTGGTCGAAATAGGGTAAT 1580
||||||||||||||||| |||| ||||| ||||||||||| ||| |||||||||||||
Sbjct 1473 TACTCATTAATGTTTTTG-TTTTAGTGTTT-TTTTTCTTGTTCGGTTGAAATAGGGTAAT 1530
Query 1581 TCATGTAGA-CCtttttttGTAACGTTTCTAAGAAAACAA--TATGGGATTTTTCTAGA 1636
||||||||| ||||||| ||||||||||||||||||| || ||||||||| |||||||
Sbjct 1531 TCATGTAGAACCTTTTTGTGTAACGTTTCTAAGAAAAAAAAATATGGGATTGTTCTAGA 1589
> AT1G13560.1 | Symbols: AAPT1, ATAAPT1 | aminoalcoholphosphotransferase
1 | chr1:4638514-4642104 REVERSE LENGTH=1666
Length=1666
Score = 1155 bits (625), Expect = 0.0
Identities = 1011/1195 (85%), Gaps = 35/1195 (3%)
Strand=Plus/Plus
Query 209 aaTGGGTTACATAGGAGCTCATGGTGTAGCTGCTCTTAAGAAACACAAATACAGTGGTGT 268
|||||||||||||||||||||||||||||| |||||| | | ||||||||||||| ||
Sbjct 176 AATGGGTTACATAGGAGCTCATGGTGTAGCAGCTCTTCATAGGTACAAATACAGTGGAGT 235
Query 269 TGATCATTCTTATCTTGCCAAATATGTTCTCCAACCTTTTTGGAAC-CGTTTTGTCAAAA 327
||||| ||||||||||||||||| || ||||||||||||||| || || |||||||||
Sbjct 236 GGATCACTCTTATCTTGCCAAATACGTCCTCCAACCTTTTTGG-ACTCGATTTGTCAAAG 294
Query 328 TCTTCCCTCTTTGGATGCCACCCAACATGATAACACTTATGGGGTTCATGTTTCTTCTCA 387
|||||||||| ||||||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct 295 TCTTCCCTCTATGGATGCCACCAAACATGATAACGCTTATGGGGTTTATGTTTCTAGTCA 354
Query 388 CAT-CTGCTCTGTTAGGCTATATATACTCACCTAAGTTGGATTCTCCTCCTCCTCGATGG 446
| | || | ||| ||||||||||||| |||||| ||||||||||||||||||| ||||||
Sbjct 355 CTTCCT-CCCTGCTAGGCTATATATATTCACCTCAGTTGGATTCTCCTCCTCCACGATGG 413
Query 447 GTCCATTTTGCACACGGCTTACTTCTATTTTTGTATCAGACATTTGATGCGGTTGATGGG 506
|| || || ||||| || |||||||| || ||||||||||||||||||||||||||||||
Sbjct 414 GTTCACTTCGCACATGGTTTACTTCTCTTCTTGTATCAGACATTTGATGCGGTTGATGGG 473
Query 507 AAGCAAGCACGAAGAACAAATTCATCTAGCCCACTAGGAGAGCTTTTTGACCATGGTTGC 566
||||||||| |||| |||||||| |||||||| ||||||||||| || || ||||||||
Sbjct 474 AAGCAAGCAAGAAGGACAAATTCCTCTAGCCCCCTAGGAGAGCTCTTCGATCATGGTTGT 533
Query 567 GATGCTCTTGGTTGTGCGTTAGAAACAATGGCATATGGGAGCACTGCAATGTGTGGAAGA 626
|| || |||| ||||||||| ||| | ||||||| ||| |||||||||||||||||||||
Sbjct 534 GACGCGCTTGCTTGTGCGTTTGAAGCCATGGCATTTGGAAGCACTGCAATGTGTGGAAGA 593
Query 627 GATACTTTCTGGTTTTGGGTTATTTCAGCTGTTCCATTTTTTGGAGCAACATGGGAACAC 686
|||||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||
Sbjct 594 GATACTTTCTGGTTCTGGGTTATTTCAGCTATTCCATTTTATGGAGCTACATGGGAACAC 653
Query 687 TATTTTACCAATACGCTTACTCTTCCGGT-AGTCAATGGTCCTACAGAAGGTCTTGCACT 745
||||| ||||| || |||| ||||||||| | ||||||| |||||||| || ||||||||
Sbjct 654 TATTTCACCAACACACTTATTCTTCCGGTTA-TCAATGGGCCTACAGAGGGGCTTGCACT 712
Query 746 TATATACTGTG-GCCATTTCTTCACAGCCATTGTTGGTGCCGAGTGGTGGGCTCAGCCGT 804
||||| ||| |||| |||||||||||||| || ||||| || ||||||||||||| ||
Sbjct 713 TATATT-TGTCAGCCACTTCTTCACAGCCATCGTCGGTGCTGAATGGTGGGCTCAGCAGT 771
Query 805 TTGGGAAGTCGATTCCTTTGTTTAGTTGGGTTCCGTTTTTGAACGAGATGCAAA-TGTCC 863
| ||| |||| || || |||||||||||||| || ||| |||| ||||| |||| | ||
Sbjct 772 TAGGGCAGTCAATACCATTGTTTAGTTGGGTGCCATTTGTGAATGAGATTCAAACT-TCT 830
Query 864 AGAATAATACTATTCACGATGATA--TTCTTCGCTGTTATACCAACCCTTGCAATCAACA 921
||| | | |||| || |||||| || || ||||||||||||||| ||||| ||||
Sbjct 831 AGAGCAGTGCTATACATGATGATCGCTT-TT-GCTGTTATACCAACCGTTGCATTCAAT- 887
Query 922 CGT--CTAATGTTTACAAAGTTGTAC-AGTCAAGAAAAGGAAGTATGCT-TCTAGCATTA 977
|| | ||||| |||||||| || | | |||||||| || || ||| | | |||| |||
Sbjct 888 -GTAACAAATGTCTACAAAGTCGTTCGA-TCAAGAAACGGGAGCATGGTGT-TAGCGTTA 944
Query 978 GCTATGCTATATCCCTTAGCCA-CGTTAATTGCAGGAGTTTTGATTTGGGATTACTTGTC 1036
|||||||| |||||||| | | ||| ||| |||||||||||| ||||||||||||||
Sbjct 945 GCTATGCTGTATCCCTTCGTTGTC-TTACTTGGAGGAGTTTTGATATGGGATTACTTGTC 1003
Query 1037 TCCAATTGATCTCATAAGAAAC-TACCCTCACTTAGTTGTATTGGGAACTGGTCTTGCAT 1095
|||||| |||||||| | ||| || ||||||||||||||| | |||||||| |||||||
Sbjct 1004 TCCAATCAATCTCATA-GCAACATATCCTCACTTAGTTGTACTCGGAACTGGACTTGCAT 1062
Query 1096 TTGGATTCCTT-GTGGGAAGAATGATTCTAGCTCACTTATGTGACGAACCAAAAGGATTA 1154
||||||| || ||||||||||||||||| |||||||| ||||| || || |||||| ||
Sbjct 1063 TTGGATTT-TTAGTGGGAAGAATGATTCTTGCTCACTTGTGTGATGAGCCTAAAGGACTA 1121
Query 1155 AAAACAAACATGTGTATGTCATTGCTTTACCTTCCCTTTGCACTAGCAAATGCTCTAACC 1214
|||||||||||||| |||||| | || || |||||||||||||| |||||||| ||||||
Sbjct 1122 AAAACAAACATGTGCATGTCACTACTCTATCTTCCCTTTGCACTTGCAAATGCGCTAACC 1181
Query 1215 GCTAGACTCAATGAC-GGGGTTCCTCTTGTGGACGAGTTTTGGGTCCTTCTTGGTTATTG 1273
|| ||| | |||| | ||||||||||| || ||||| || ||||| |||||||| || ||
Sbjct 1182 GCAAGATTGAATG-CTGGGGTTCCTCTAGTCGACGAATTATGGGTTCTTCTTGGCTACTG 1240
Query 1274 TATATTCACATTGTCACTATA-TGCGCATTTTGCAACTTCAGTCATTCATGAGATCACA- 1331
||||||||| ||||| |||| | ||| |||||||| |||||||| |||||||||||
Sbjct 1241 CATATTCACAGTGTCATTATACTT-GCACTTTGCAACATCAGTCATCCATGAGATCACTG 1299
Query 1332 ACTGCACTTGGAATCTACTGCTTCAGGATTACTCGTAAAGAAGCTTGAAGAAGAA 1386
| || ||||||||||||||||| ||||| || |||||||||||||||| |||||
Sbjct 1300 AG-GCCCTTGGAATCTACTGCTTTAGGATCACGCGTAAAGAAGCTTGAA-AAGAA 1352
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80822877450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5