BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484451
Length=1190
Score E
Sequences producing significant alignments: (Bits) Value
AT3G26760.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1749 0.0
> AT3G26760.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:9843591-9845176 FORWARD LENGTH=1228
Length=1228
Score = 1749 bits (947), Expect = 0.0
Identities = 1051/1102 (95%), Gaps = 4/1102 (0%)
Strand=Plus/Plus
Query 1 AATTCACGTTCACATAG--TAATTAAGAAGAGGCAGAA-GCAAAAATATGTTGAGGTCAT 57
||||||||||||||||| |||||| ||||||||||| | ||||| |||| ||||||||
Sbjct 2 AATTCACGTTCACATAGAAAAATTAACAAGAGGCAGAAGGAAAAAAAATGTGGAGGTCAT 61
Query 58 TCGCAAGAAGCTTCAAACTCATTAATGTGCCAAATGGTTTGATATCCAAGCCAATTAGCT 117
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 62 TCGCAAGAAGCTTCAAACTCATTAATGTACCAAATGGTTTGATATCCAAGCCAATTCGCT 121
Query 118 CCACTCTCCTCTATTCAACTTCTTCAAGAAAGTTAGAAGGAAAAGTAGCGGTCATAACCG 177
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 CTACTCTCCTCTATTCAACTTCTTCAAGAAAGTTAGAAGGAAAAGTAGCGGTCATAACCG 181
Query 178 GCGGTGCAAGCGGCCTAGGGAAGGCCACTGCGGAGGAATTTGTGAGCCAAGGTGCGCAAG 237
|||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 182 GCGGGGCAAGCGGAATAGGGAAGGCCACAGCGGAGGAATTTGTGAGCCAAGGTGCGCAAG 241
Query 238 TGTTTATCGTAGATATAGATGAAGAGACTGGTCATAAGGTCGCGACCGAACTTGGCTCAG 297
|| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 242 TGATTATCGTAGATATAGATGAAGAGGCTGGTCATATGGTCGCGACCGAACTTGGCTCAG 301
Query 298 CCGCACATTTCTTAAGATGTGATGTCACTGAGGAGGAACAAATCGCTAAGGCCGTGGAGA 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 CCGCACATTTCTTAAGATGTGATGTCACTGAGGAGGAACAAATCGCTAAGGCCGTGGAGA 361
Query 358 CCGCCGTTTCTCGTCATGGGAAGCTTGACATAATGCTCAACAGTGCTGGAATATCATGCT 417
||||||| |||||||||||||||| ||| |||||||||| ||||| |||||||||||||
Sbjct 362 CCGCCGTGACTCGTCATGGGAAGCTCGACGTAATGCTCAATAGTGCGGGAATATCATGCT 421
Query 418 CCATATCACCACCAAGCATAGCGGACCTAGACATGGACACTTACGACAAAGTGATGCGTC 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 CCATATCACCACCAAGCATAGCGGACCTAGACATGGACACTTACGACAAAGTGATGCGTC 481
Query 478 TCAACGTGCGAGGTACTGTCTTAGGGATAAAGCACGCGGCTCGAGCCATGATCCCCGCAG 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 482 TCAACGTGCGAGGTACTGTCTTAGGGATAAAGCACGCGGCTCGAGCCATGATCCCCGCTG 541
Query 538 GCTCGGGTTCCATCCTTTGCCTCTCTAGCATCAGCGGCTTGATGGGCGGTCTAGGCCCAC 597
||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 542 GCTCGGGCTCCATCCTCTGCCTCTCTAGCATCAGCGGCTTGATGGGTGGTCTAGGCCCAC 601
Query 598 ACGCATACTCAATCTCTAAATTCACAATCCCGGGTGTGGTCAAGACGGTTGCTAGCGAGC 657
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 602 ACGCATACTCAATCTCTAAATTCACAATCCCGGGTGTGGTCAAGACGGTTGCGAGCGAGC 661
Query 658 TGTGTAAGCACGGATTGAGAATCAATTGTATATCACCCGCGGGCATCCCGACGCCTCTAA 717
|||||||||||||| | ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 662 TGTGTAAGCACGGACTAAGAATCAATTGTATATCGCCCGCAGGCATCCCGACGCCTCTAA 721
Query 718 CCCTGAGGATGTTTCGGGAGGCGTTTGCGGGTCATAACATTCCGGAGGAACAACTTTTGG 777
| ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 722 CTTTGAGGATGTTTCGAGAGGCGTTTGCGGGTCATAGCATTCGGGAGGAACAACTTTTGG 781
Query 778 CGATTGTGAACGCGACGGGAGAGCTAAAGGGAGAGAAGTGTGAGGAGATAGATGTGGCTA 837
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 782 CGATTGTGAACGCGACGGGAGAACTAAAGGGAGAGAAGTGTGAGGAGATAGATGTGGCTA 841
Query 838 AAGCGGCTTTGTATTTGGCATCGGATGATGCTAAGTTTGTGACGGGGCATAACCTTGTTG 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 AAGCGGCTTTGTATTTGGCATCGGATGATGCTAAGTTTGTGACGGGGCATAACCTTGTTG 901
Query 898 TTGATGGTGGATTTACTTGTTTCAAGTCTCTGAATCTCCCTTCTGCTTAATTAATTAATC 957
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 902 TTGATGGTGGATTTACTTGTTTCAAGTCTCTTAATCTCCCTTCTGCTTAATTAATTTATC 961
Query 958 AAGTTAACTAAAGTCttttttttctttttAGTTCTCTCATGTGGTTATTATGAGTGTTTT 1017
|||||| |||||| |||||||| ||||||||| ||| |||||||||||| |||||||||
Sbjct 962 AAGTTAGTTAAAGTTTTTTTTTTTTTTTTAGTTTTCTGATGTGGTTATTACGAGTGTTTT 1021
Query 1018 GGCCTTTTGGGTCATTGTTGATGTGATCGTTTGTAATCTATGGGACACTATATGGTTGGA 1077
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1022 GGCCTTTTGGGTCATTGCTGATGTGATCGTTTGTAATCTATGGGACATTATATGGTTGGA 1081
Query 1078 ACTTTGGAATTATAAATTTAGC 1099
| ||||||||||||||||||||
Sbjct 1082 A-TTTGGAATTATAAATTTAGC 1102
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58433434380
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5