BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484455 Length=1385 Score E Sequences producing significant alignments: (Bits) Value AT3G26790.1 | Symbols: FUS3 | AP2/B3-like transcriptional facto... 2026 0.0 > AT3G26790.1 | Symbols: FUS3 | AP2/B3-like transcriptional factor family protein | chr3:9853828-9855989 REVERSE LENGTH=1380 Length=1380 Score = 2026 bits (1097), Expect = 0.0 Identities = 1310/1405 (93%), Gaps = 46/1405 (3%) Strand=Plus/Plus Query 1 AATCTCTGATTGCCCAGCGTCCATTTTAAGCCTCTGTTTCGATCTGcacaacacacatac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AATCTCTGATTGCCCAGCGTCCATTTTAAGCCTCTGTTTCGATCTGCACAACACACATAC 60 Query 61 acacaacacaacacaaaccacaG--tctc--tctctatct-tc--tctt-tc--tctctc 110 ||||||||||||||||||||||| |||| ||||| ||| || |||| || |||||| Sbjct 61 ACACAACACAACACAAACCACAGTCTCTCTTTCTCTCTCTATCTATCTTCTCTTTCTCTC 120 Query 111 tctatctctATCACTGAAACCCAAAGAGATCCACCATTTGTTCTTTTTTCCTTCATACAG 170 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 121 TCTATCTCTATCACTGAAACCCAAAGAGATCCACCATTTGTTCTTTTTTCCTTCACACAG 180 Query 171 AGAACTGTTTTCTTCCACACTTCCTTTTTACTAGGCAGTGTTAACCAATTGAGAGAGAAA 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGAACTGTTTTCTTCCACACTTCCTTTTTACTAGGCAGTGTTAACCAATTGAGAGAGAAA 240 Query 231 AATGATGGTTGATGAAAATGTGGAAACCAAGGCCTCTACTTTAGTGGCAAGTGTTGATCA 290 |||||||||||||||||||||||||||||||||||||||||||||||||| | || | Sbjct 241 AATGATGGTTGATGAAAATGTGGAAACCAAGGCCTCTACTTTAGTGGCAA--G-TG-T-- 294 Query 291 TGATCATCATGGGTTTGGATCCGGGTCGGGTCATGATCATCATGGGTTATCGGCGTCTGT 350 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 295 TG---ATCATGGGTTTGGATCCGGGTCGGGTCATGATCATCATGGGTTATCGGCGTCTGT 351 Query 351 GCCTCTGCTTGGTGTTAACTGGAAGAAGAGAAGGATGCCAAGACAGAGACGATCTTCTTC 410 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 352 GCCTCTTCTTGGTGTTAACTGGAAGAAGAGAAGGATGCCTAGACAGAGACGATCTTCTTC 411 Query 411 TTCCTTTAACCTTCTCTCTTTTCCTCCTCCTATGCCTCCTATTTCCCACGTGCAAACTCC 470 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct 412 TTCCTTTAACCTTCTCTCTTTCCCTCCTCCTATGCCTCCTATTTCCCACGTGCCAACTCC 471 Query 471 TCTCCCCGCACGTAAAATTGACCCAACAAAGCTAAGATTCCTCTTCCAAAAGGAACTCAA 530 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 472 TCTCCCCGCACGTAAAATTGACCCAAGAAAGCTAAGATTCCTCTTCCAAAAGGAACTCAA 531 Query 531 GAACAGTGACGTCAGCTCCCTCCGCCGTATGATACTCCCCAAGAAAGCGGCAGAGGCTCA 590 |||||||||||||||||| ||||| |||||||||||||| |||||||| || |||||||| Sbjct 532 GAACAGTGACGTCAGCTCTCTCCGACGTATGATACTCCCGAAGAAAGCCGCGGAGGCTCA 591 Query 591 CTTGCCGGCACTGGAATGCAAGGAAGGGATTCCAATAAGAATGGAAGATTTGAATGGTCT 650 |||||||||||| |||||||||||||||||||| |||||||||||||||||| | ||| | Sbjct 592 CTTGCCGGCACTTGAATGCAAGGAAGGGATTCCTATAAGAATGGAAGATTTGGACGGTTT 651 Query 651 TCACGTTTGGACCTTCAAGTATAGGTACTGGCCAAACAACAATAGCAGAATGTACGTGCT 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 652 TCACGTTTGGACCTTCAAGTATAGGTACTGGCCAAACAACAATAGCAGAATGTACGTGCT 711 Query 711 AGAAAACACAGGCGATTTTGTGAACGCTCATGGTCTGCAGCTAGGTGACTTCATCATGGT 770 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 712 AGAAAACACAGGCGATTTTGTGAATGCTCATGGTCTGCAGCTAGGTGACTTCATCATGGT 771 Query 771 TTACCAAGATCTCTACTCAAACAATTACGTTATACAAGCAAGAAAGGCATCAGAAGAAGA 830 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 772 TTACCAAGATCTCTACTCAAACAATTACGTTATACAAGCAAGAAAAGCATCGGAAGAAGA 831 Query 831 AG--G-AGACGTAACCAATGTTGAAGAAGACGACGTTTACACAAACTTAACAAGGATCGA 887 || | |||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 832 AGAAGTAGACGTAATCAATCTTGAAGAAGACGACGTTTACACAAACTTAACAAGGATCGA 891 Query 888 AAACACGGTCGTTAACGATCTTCTCCTCCAAGATTTTAATCATCacaacaccaacaacaa 947 |||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 892 AAACACTGTGGTTAACGATCTTCTCCTCCAAGATTTTAATCATCACAACAACAACAACAA 951 Query 948 caacaacaacaaca--a-cagcaacaaATGTTCTTACTATTATCCCA-TCATCGACGATG 1003 |||||||| ||||| | ||||||||||||||||||||||||||| | |||| || |||| Sbjct 952 CAACAACAGCAACAGCAACAGCAACAAATGTTCTTACTATTATCC-AGTCATAGATGATG 1010 Query 1004 TCACTACAACCACTG-GTTCTTTTGTCTACGACACGACGGCT-TTAACCTCCAACGACAC 1061 |||| |||| ||| | || ||||||||||||||||||||||| ||| |||||||||| || Sbjct 1011 TCACCACAAACACAGAGT-CTTTTGTCTACGACACGACGGCTCTTA-CCTCCAACGATAC 1068 Query 1062 TCCTCTCGATTTTTTGGGTGGACATACGACGACTACTAATAATTATTATTCCAAGTTTGG 1121 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1069 TCCTCTCGATTTTTTGGGTGGACATACGACGACTACTAATAATTATTACTCCAAGTTCGG 1128 Query 1122 AACATTCGATGGTTTGGGCTCCGTTGAGAATATATCTCTCGATGACTTCTACTAGATGAT 1181 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 1129 AACATTCGATGGTTTGGGCTCCGTTGAGAATATCTCTCTCGATGACTTCTACTAGATAAT 1188 Query 1182 CAATCGATGGGCTCATGATGATTGTTAATGGTGATCAACTATTTTATTTCCTTATAATAG 1241 ||||||||||||||||| | ||| || |||||||||| |||||| || ||||||||||| Sbjct 1189 CAATCGATGGGCTCATGGT-ATTCTTGATGGTGATCAGCTATTTAATATCCTTATAATA- 1246 Query 1242 ATACCCTATAAGAATTAAGTGCA-TTTGGCATATATATTATCAAGTGTTCAGTATTACAT 1300 || |||||||||||| |||| |||| |||||||||||||||||||| | ||| |||| Sbjct 1247 -TA---TATAAGAATTAAATGCAATTTG-CATATATATTATCAAGTGTTGAATATAACAT 1301 Query 1301 TACAGTTTATATGAAAATTATAGCTAGATGGGAGTCATATGAAGGTGTGTTGTGTTGTGT 1360 |||||||||||||||||| ||||||||||| ||||||| ||||||||||||| || || Sbjct 1302 TACAGTTTATATGAAAATCATAGCTAGATGTGAGTCAT--GAAGGTGTGTTGTATT-TG- 1357 Query 1361 TTGATGAATAAATGTTATTTAGTGT 1385 |||||||||||||||||||||| Sbjct 1358 ---ATGAATAAATGTTATTTAGTGT 1379 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68222540655 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5