BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484471
Length=2440
Score E
Sequences producing significant alignments: (Bits) Value
AT3G26890.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 3347 0.0
AT5G41110.1 | Symbols: | unknown protein; INVOLVED IN: biologi... 628 6e-179
> AT3G26890.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G41110.1);
Has 393 Blast hits to 383 proteins in 134 species: Archae
- 0; Bacteria - 61; Metazoa - 171; Fungi - 74; Plants - 80;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). | chr3:9907282-9911589
REVERSE LENGTH=2675
Length=2675
Score = 3347 bits (1812), Expect = 0.0
Identities = 2263/2466 (92%), Gaps = 90/2466 (4%)
Strand=Plus/Plus
Query 19 GAAAGGGTAACTGCAATGAACTCTGTATCTGTCA-CCTTCCCATTTCATGTAGCTTCAGA 77
|||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||
Sbjct 223 GAAAGGGTAACTGCAATGAACTCTGTATCTGTCACCCTT-GCATTTCATGTAACTTCAGA 281
Query 78 CTGCTCTTCCATAAATCAATGTCGGATAAATGTTAAGTGTTCGATTTCTTGTATGCGGGT 137
||| ||| || |||| ||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 282 CTGTTCTGCCGTAAACCAATGTCGGATAAATGTTAAGTGTTTGGTTTCTTGTATGCGGGT 341
Query 138 CTGTAGGCAAGCAATGCACGATTTGTGGATGCCTGTGACGGATACATAGTTCTAGATTTT 197
| ||| ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||
Sbjct 342 CAGTAAGCAAGCAATGCACGAGTTGTGGATGCCTGTGACTGATACATAATTCTAGATTTT 401
Query 198 TATTTATTCTTCTGTTAGAGATAGAGGTAGTCAGTATTG-TTATTTTCAAGGATTTGGTA 256
|||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 402 TATTTATTGTTCTGTTAGAGATAGAGTTAGTCAGTATTGTTTATTTTCAAGGATTTGGTA 461
Query 257 GTTTCTAGGGAGTTTCTAGATAAGTAGGGATTTGGAAACTCACATCTCAGAAGTGACCAT 316
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 462 GTTTCTAGGGAGTTTTTAGATAATTAGGGATTTGGAAACTCACATCTCAGAAGTGACCAT 521
Query 317 AAACCCTTTTACTTGATAAATTTCATTGAGCATTAGTTATGGGTCTGCCACAAACTGCTT 376
||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 522 AAACCCTTTTACTTGATAA--------GAGCATTAGTTATGGGTCTGCCACAGACTGCTT 573
Query 377 CAAGTGAACAGTCCCAGGAAGCTTTGTCTGCTCCAAGTTGTAGCCTTTCGCAAAGTCTGC 436
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 574 CAAGTGAACAATCCCAGGAAGCTTTGTCTACTCCAAGTTGTAGCCTTTCGCAAAGTCTGC 633
Query 437 CTGTGTATGCCACTTCCCATGATTCAGATGG----A---G-G-AAGCGAGAGA-GGCATC 486
|||||||||| ||||||||||||||||||| | | | ||| ||| || || ||
Sbjct 634 CTGTGTATGCTACTTCCCATGATTCAGATGTTCTTAACAGTGGAAGTGAG-GAAGGAATT 692
Query 487 TGCTCTTCCATTGGAGAATTTGATAGAAAGACATCGTTGGAGCCT-T----TCCA-TG-- 538
||||||||||||| ||| ||||||||||| ||||| ||||||||| | | || ||
Sbjct 693 TGCTCTTCCATTGCAGAGTTTGATAGAAAAACATCATTGGAGCCTCTGGAGTTCACTGAT 752
Query 539 G---C----AC-TT--GTG----TTGT-T----ACCTCATCAAGTGCTCATGGATCGACT 579
| | | || ||| |||| | |||||||||||||||||||||||||||
Sbjct 753 GATTCGTGTAGATTCCGTGGGACTTGTGTTGTTACCTCATCAAGTGCTCATGGATCGACT 812
Query 580 AGTTATGCTGCAGGTAAGGTTGGTTCGAGTCTTACAGGAGCTAGAAGGATAGTTGGTTTT 639
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 813 AGTTATGCTGCAGGTAAGGTTAGTTCGAGTCTTACTGGAGCTAGAAGGATAGTTGGTTTT 872
Query 640 GCATCAAGCGAAACTAGCTCACTGGACAACAAACAAACGAGTGTCGCTGTTGATCACTCT 699
|| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 873 GCGTCAGGCGAAACAAGCTCACTGGACAACAAACAAACGAGTGTCGCTGTTGATCACTCT 932
Query 700 CTATCATCCACTGGTGGAGTTACAGGAGTAGATATTGGTGGAGCGTTAGTCAGGAAACGA 759
||||||||||||| ||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct 933 CTATCATCCACTGTTGGAGTTGCAGGAGTAGATATCGGTGGAGCATTAGTCAGGAAACGA 992
Query 760 GTACTCTCCCCGTTGAATACTCTTTTCCCTGTAAAATTCAGAGGTGACCTTCTTGATATC 819
||||||||||| || ||||||||||||||||| ||||||||||||||||| | |||||||
Sbjct 993 GTACTCTCCCCCTTAAATACTCTTTTCCCTGTCAAATTCAGAGGTGACCTGCATGATATC 1052
Query 820 AGCTGTGGTAACCATCAACAAATTACTTATTCTGGTCAGTCTAATGGATTCTGCAAGTCT 879
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1053 AGCTGTGGTAACCACCAACAAATTACTTATTCTGGTCAGTCTAATGGATTCTGCAACTCT 1112
Query 880 GTCGCACAAGATCACAATAA-GGCTAATACCCCTAGTAGGTTACATCCCTCTACCACTCC 938
|||||||||||||||| ||| |||||||||||||||||||||||||| ||| ||||| |
Sbjct 1113 GTCGCACAAGATCACA-TAAAGGCTAATACCCCTAGTAGGTTACATC--TCT-CCACTAC 1168
Query 939 TACTACCACAACCACATCTAGTTGCTGGGAGTGGAAGAATGCCTCAAACAGTGGTAGACT 998
| |||| | | ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1169 TCCTAC-A-A-CCACA---AGTTGCTGGGAGTGGAAGAATGTCTCAAACAGTGGTAGACT 1222
Query 999 CTCGTCCATGGTCTTCACTGATGGTCCATTGCTTGACTCTGTAGATCTCCGCCGACCCAT 1058
|||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1223 CTCGTCTATGGTCTTCACTGATGGTCCATTGCTTGACTCTGTAGATCTCCGCCAACCCGT 1282
Query 1059 CAAAGG---TGAGGTTTGCTTATATTCCCCACTACATGAAACGTCTAGCATACCCAATAA 1115
|||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 1283 CAAAGGAGGTGAGGTTTGCTTATATTCCCCACTATATGAAACGTCTAGCACACCCAATAA 1342
Query 1116 GCCCTTACCTTGTGATAAGGAAATATCTGTGTCTCCACCGCTGTGTCTGTCACCACTTGG 1175
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 1343 GCCCTTACCTTGTGATAAGGAAATATCTGTCTCTCCGCCGCTTTGTCTGTCACCACTTGG 1402
Query 1176 TCCGAAGTTTTCTGAGAGAATAAAAACTGTAAGAAGTTGCCAAAATGGGAAGATACTGGA 1235
||||||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||
Sbjct 1403 TCCGAAGTTTTCTGAGAGAGTAAAAGCTGTAAGAAGTTGCCAAACTGGGAAAATACTGGA 1462
Query 1236 AGATTTAAGGAATATCAGTGAAGAAGCAGAATTAAGAGTCGATCGTAGATTGTTTGATGA 1295
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1463 AGATTTAAGGAATATCAGTGAAGAAGCAGAATTAAGAGTTGATCGTAGATTGTTTGATGA 1522
Query 1296 TGCATATGCCATTAGGAGAGCATTTTCAATGGAGAGAAGTACTGAATCAGCTCCTGCATC 1355
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1523 TGCATATGCCATTAGGAGAGCGTTTTCAATGGAGAGAAGTACTGAATCAGCTCCTGCATC 1582
Query 1356 TCCATGTAAGAGGTTCATTAGAAGCTTGAGTGGACGCCCCATTCAGAGGTCATTGGTTGG 1415
||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1583 TCCATGTAAAAGGTTCATTAGAAGCTTGAGTGGACGGCCTATTCAGAGGTCATTGGTTGG 1642
Query 1416 TTCTTTTGAGGAGTCACTCTTGACAGGACGATTGTCATGCGGGCCAACAAATCAGAAGAT 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1643 TTCTTTTGAGGAGTCACTCTTGACAGGACGATTGTCATGCGGGCCAACAAATCAGAAGAT 1702
Query 1476 TGACGGCTTCCTTGCCGTTCTTAGTATTGCTGGGGGGAACATCTCTCCAAAATCACAGAA 1535
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1703 TGACGGCTTTCTTGCCGTTCTTAGTATTGCTGGGGGAAACATCTCTCCAAAATCACAGAA 1762
Query 1536 GCTTCCATTCTCAGTAACTAGTGCTGGTGATGATTCCCTTTTGCTATACTATGCCTCCAT 1595
||||||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||
Sbjct 1763 GCTTCCATTCTCAGTAACTAGTGCTGGTGATGATTGCCTCTTGTTATACTACGCCTCCAT 1822
Query 1596 AGATCTCGCCGGAGGATCTAAATTGAACAAATTCTGGGGCCAGAAAA-TGAAAACAAGTC 1654
||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 1823 AGATCTCGCTGGAGGATCTAAATTGAACAAATTCTGGGGCCA-AAAAGTGAAAACAAGTC 1881
Query 1655 AAATGAACTCTGATGCTCAGAGTTCGAAAAGCCAACTGCGGATCCCCATGAAGGGTCGGA 1714
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1882 AAATGAACTCTGATGCCCAGAGTTCGAAGAGCCAACTGCGGATCCCCATGAAGGGTCGGA 1941
Query 1715 TTCAACTGGTTCTTAGTAACCCTGAGAAAACACCTCTTCACACCTTCCTCTGTAACTATG 1774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1942 TTCAACTGGTTCTTAGTAACCCTGAGAAAACACCTCTTCACACCTTCCTCTGTAACTATG 2001
Query 1775 ACTTGACTGATATGCCAGCCGGTACAAAGACGTTCTTGCGCCAGAAGGTTACTCTGGGAT 1834
||||||||||||||||||| || |||||||||||||||||||| |||||||| |||||||
Sbjct 2002 ACTTGACTGATATGCCAGCTGGAACAAAGACGTTCTTGCGCCAAAAGGTTACACTGGGAT 2061
Query 1835 CATCTAATCCTACTAGTGAAGCAATGCAAGAGAACACTAGAAAATCCAAAAACTTGGAAA 1894
|||||||||| ||||||||||||| ||||||||||||||||||| ||| || ||||||||
Sbjct 2062 CATCTAATCCAACTAGTGAAGCAACGCAAGAGAACACTAGAAAAGCCACAAGCTTGGAAA 2121
Query 1895 AAGAAAATTCTAAACAGGGGGACAAAGAAAGTTGTGAAGGATCTGATTTAGTAGATTCAG 1954
||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 2122 AAGAAAACTCTAAACATGGGGACAAAGAGAGTTGTGAAGGATCTGATTCAGTAGATTCAG 2181
Query 1955 TGGAAGGAGATGAGAAATTTGATGAGTTACATGAAAGTGAAAAAAGCTGTTTAAA-CACG 2013
|||||||||||| | || | |||||||||| ||||| ||||||||| | ||
Sbjct 2182 TGGAAGGAGATGTG---TT-G--------CATGAAAGTGGAAAAATCTGTTTAAAGC-CG 2228
Query 2014 TCCAAAGAATGTAACGGTGGTTCTGGTGCTCTACGCTATGCTCTTCATCTCAGATTTCTT 2073
|| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 2229 TCGAAAGAATGTAACGGTGGTTCTGGTGCTCTACGCTACGCTCTTCATCTGAGATTTCTT 2288
Query 2074 TGCCCATTACCGAAGAAA-GCTTCAAAGAAATCTGACGAAACCGAAACTACGGGGCAAAA 2132
||||||||||| |||||| | ||||||||||||||| ||||||||| | |||||||||||
Sbjct 2289 TGCCCATTACCTAAGAAAAG-TTCAAAGAAATCTGAAGAAACCGAATCCACGGGGCAAAA 2347
Query 2133 GAAAAACTTGGATTCAGATGGGAAGAGGAGATTCTATCTGTACAACGACTTAAGAGTCGT 2192
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2348 GAAAAACTTGGATTCAGATGGGAAGAGGAGATTCTATCTGTACAATGACTTAAGAGTCGT 2407
Query 2193 GTTTCCCCAGCGCCACACAGATTCCGATGAAGGAAAGTTGAACGTGGAGTACCATTACCC 2252
|||||| || || ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 2408 GTTTCCTCAACGTCACACAGATTCCGATGAAGGAAAGTTGAATGTCGAGTACCATTACCC 2467
Query 2253 TGAAAACCCAAGATACTTCGACATCACCGAGTGAGAACTTAACTGGTTCAGCTTCATGTT 2312
|||||||||||||||||||||||||||||||||||||||||||| | || | |||
Sbjct 2468 TGAAAACCCAAGATACTTCGACATCACCGAGTGAGAACTTAACT--T-CA--TG---GTT 2519
Query 2313 TACACAAGCTCAATGGTTTTCTTGTTCAAGAAGAAATCAGTGGACtttttttGTACATAC 2372
|||||||||||||| |||||||||| |||||||||||| |||||||||| |||||||||
Sbjct 2520 -ACACAAGCTCAATGATTTTCTTGTTTAAGAAGAAATCAATGGACTTTTTCTGTACATAC 2578
Query 2373 AAATTTATAGTTACAAATCACAATGGCTCTGACCCACTTTGTACAGTTTACCATTTCGGG 2432
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 2579 AAATTTATAGTCACAAATCAGAATGGCTCTGACCCACTTTGTACAGTTTACCATTTCCGG 2638
Query 2433 GTTCTC 2438
||||||
Sbjct 2639 GTTCTC 2644
> AT5G41110.1 | Symbols: | unknown protein; INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT3G26890.5);
Has 1807 Blast hits to 1807 proteins in 277 species:
Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants
- 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
| chr5:16451470-16454989 FORWARD LENGTH=2470
Length=2470
Score = 628 bits (340), Expect = 6e-179
Identities = 916/1177 (78%), Gaps = 108/1177 (9%)
Strand=Plus/Plus
Query 705 ATC-CACTGGTGGAGT-TACAGGA-GTAGATA-T-T-GGTGGAGCGTTAGTCAGGAAACG 758
||| |||||||||| | || | || ||||||| | | |||||| ||||||||||||||||
Sbjct 975 ATCGCACTGGTGGA-TCTA-ATGAGGTAGATATTATCGGTGGATCGTTAGTCAGGAAACG 1032
Query 759 AGT-A-CTCTCCCCGTTGAATACTCTTTTCCCTGTA-AAATTCAGAGGTGACCT-TCTTG 814
|| | |||||| | |||||| |||||||||| | ||||| ||||| || || ||||
Sbjct 1033 GGTAAGCTCTCCTC--TGAATAAGCTTTTCCCTG-AGAAATTTAGAGGCGA-CTCGCTTG 1088
Query 815 ATATCAGCTGTGGTAACCATCAACAAATTACTTATTCTGGTCAGT-CTAATGGATTCTGC 873
|||||||| | | || | |||| || |||| | |||||| | |||| ||||| | |
Sbjct 1089 ATATCAGCCATAGCAA-C--CAACCGATGACTTCTGCTGGTC-TTCCTAAAGGATT-T-C 1142
Query 874 A-AGT-CTGTCGCACAAGATCACAATAAGGCTAATACCCCTAGTAGGTTACATCCCTCTA 931
| | | |||| | ||||||||| || || || |||| | || | || || | | ||||
Sbjct 1143 ACATTCCTGTTGGACAAGATCATAAAAAAGCCAATATCTCTGGGAGATTGCGT--CTCT- 1199
Query 932 CCACTCCTACTACCACAACCACATCTAGTTGCTGGGAGTGGAA-GAATGCCTCAAACA-G 989
|| || ||| | ||| | ||| | | || | |||| | | | ||| ||| |
Sbjct 1200 TCA--CC-ACT-TC-TAACTGC-TCT-G--AAT-GG-G-GGAATG-ACACATCACACACG 1246
Query 990 TGGTAGACTCTCGTCCA-TGGTCTTCACTGATGGTCCATTGCTTGACTCTGTA-GATCTC 1047
|||| ||| || || | | || ||||| ||||||||||||||||||||| | |||||
Sbjct 1247 -GGTAAACTTTCATCGACT-GTTTTCACGGATGGTCCATTGCTTGACTCT-AACGATCT- 1302
Query 1048 CGCCGACCCA-TCAAAGGTG-AGGTTTGCTTATATTCCCCACTACATGAAAC--GTCTAG 1103
|| | || | || ||| || | |||||||||||| ||| |||||||||| || ||
Sbjct 1303 -GCAG-CCTAGTC-AAGATGTA-CATTGCTTATATTCACCAGTACATGAAACATTTCAAG 1358
Query 1104 CATACCCAATAAGCCCTTACCTTGTGATAAGGAA-ATATCTGTGTCTCCACCGCTGTGTC 1162
|||| |||||||| ||||| ||| || || || |||||||| ||||| || || | ||
Sbjct 1359 --TACCTAATAAGCCATTACCATGTCAT-AGAAATATATCTGTCTCTCCGCCACTTTCTC 1415
Query 1163 TGTCACCACTTGGTCCGAAG-TTTTCTGAGAGAATAAAAACT-GT-AAGAAGTTGCCAAA 1219
||||||| ||||| || ||| ||||||||||| || ||| || | ||| | ||| ||
Sbjct 1416 TGTCACCTCTTGGGCC-AAGATTTTCTGAGAGGATGAAAGCTCTTCAAG--GGGGCCTAA 1472
Query 1220 ATGGGAAGATACT-G--GA--A-G---ATTTAAGGAATATC-AGTGAAGAAGCAGAA-TT 1268
||||||| || | | || | | ||||| ||||| | |||||||||||||| |
Sbjct 1473 ATGGGAATATTTTCGAAGATGATGTTTGTTTAAAGAATA-CTGGTGAAGAAGCAGAACTC 1531
Query 1269 AAGAGTCGATCGTAGATTGTTTGATGATGCAT-ATGCCAT-TAGGAGAGCATTTTCAATG 1326
| || | | || |||| |||||||||| | | ||| || | |||||| |||||||||
Sbjct 1532 AGGACT-GGTCACAGATCGTTTGATGATAC-TAATGGTATCCA-GAGAGCCTTTTCAATG 1588
Query 1327 GAGAGAAG-TACTGAATCAGCTCCTGCATCTCCATGTAAGAGGTTCATTAGAAGCTTGAG 1385
|| || || || |||||||| |||| ||||||||||||| ||||| | ||||||||||||
Sbjct 1589 GATAG-AGCTATTGAATCAGTTCCTACATCTCCATGTAAAAGGTTTAGTAGAAGCTTGAG 1647
Query 1386 TGGACGCCCCATTCAGAGGTCATTGGTTGGTTCTTTTGAGGAGTCACTCTTGACAGGACG 1445
|||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct 1648 TGGACGTCCCATTCAAAGGTCATTGGTTGGTTCTTTTGAAGAGTCCCTCTTTTCAGGAAG 1707
Query 1446 ATTGTCATGCGGGCCAA-CAAATCAGAAGATTGACGGCTTCCTTGCCGTTCTTAGTATTG 1504
||| || | ||| ||| | ||||||||||| ||||| || |||||| |||||||||| |
Sbjct 1708 ATTATCTTATGGG-CAAGCTAATCAGAAGATCGACGGTTTTCTTGCCATTCTTAGTATAG 1766
Query 1505 CTGGGGGGAACATCTCTCCAAAATCACAGAAGCTTCCATTCTCAGTAACTAGTGCTGGTG 1564
|||| || ||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 1767 CTGGTGGAAACATCTCTCCAAAATCACAGAAGCTTCCATTCTCAGTAACAAGTGTTGGTG 1826
Query 1565 ATGATTCCCTT-TTGCTATACTATGCCTCCATAGATCTCGCCGGAGGATCTAAATTG--A 1621
|||||| | || || |||||||||||||||||||||||| | |||||||| | ||| |
Sbjct 1827 ATGATTGC-TTCTTACTATACTATGCCTCCATAGATCTCTCTGGAGGATC-A--TTGCCA 1882
Query 1622 A-CAAATTCTGGGGCCAGAAAATGAAAAC-AAGTCAAATGAACTCTGATGCTCAGAG--T 1677
| |||||| ||||| |||||| ||||||| || |||| || ||||||||||||| |
Sbjct 1883 AGCAAATTATGGGGTCAGAAATTGAAAACCAAC-CAAAACAAGTCTGATGCTCAGACCAT 1941
Query 1678 TCGA-AAAGCCAACTGCGGATCCCCATGAAGGGTCGGATTCAACTGGTTCTTAGTAACCC 1736
| | ||| | || ||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct 1942 TA-ATAAA-CGT-CTTCGGATTCCTATGAAGGGTCGGATCCAACTGGTTCTGAGTAACCC 1998
Query 1737 TGAGAAA-ACACCTCTTCACACCTTCCTCTGTAACTATGACTTGACTGATATGCCAGC-C 1794
||| ||| |||||||| ||||| ||||| |||||||||||||| |||||||||||| | |
Sbjct 1999 TGA-AAAGACACCTCTACACACTTTCCTTTGTAACTATGACTTAACTGATATGCCA-CAC 2056
Query 1795 GGTACAAAGACGTTCTTGCGCCAGAAGGTTACTCTGG 1831
||||||||||| ||| ||||||| |||||||||||||
Sbjct 2057 GGTACAAAGACCTTCCTGCGCCAAAAGGTTACTCTGG 2093
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121184115630
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5