BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484508
Length=3002
Score E
Sequences producing significant alignments: (Bits) Value
AT3G27260.1 | Symbols: GTE8 | global transcription factor group... 4514 0.0
> AT3G27260.1 | Symbols: GTE8 | global transcription factor group
E8 | chr3:10067638-10072661 FORWARD LENGTH=3137
Length=3137
Score = 4514 bits (2444), Expect = 0.0
Identities = 2849/3040 (94%), Gaps = 46/3040 (2%)
Strand=Plus/Plus
Query 1 AAATCTTCTACTTTGTGCCGTGTTTGTGGATTGGTTCACGGATCTTTGGAGATTCCGAAA 60
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 100 AAATCTTCTACTTCGTCCCGTGTTTGTGGATTGGTTCACGGATCTTTGGAGATTCCGAAA 159
Query 61 TTGGGGGCGATTTTTATTCTAGGGTTTCTGTG-AA-TT-T--C----TCTGGAATAATTC 111
|||| ||||||||||||||||||||||| ||| || || | | | |||| ||||||
Sbjct 160 TTGGAGGCGATTTTTATTCTAGGGTTTCGGTGAAATTTGTACCGTTTTTTGGATTAATTC 219
Query 112 TTCCGTTGATCGCATCTCTTCTGGTGAGCT--C--------G----GATTTCAAGCTCCG 157
|| |||||||||| ||||| |||| ||||| | | ||||||||||||||
Sbjct 220 TTACGTTGATCGCTTCTCTCCTGGCGAGCTCGCGTTTAAAGGTTTAGATTTCAAGCTCCG 279
Query 158 TGTTGTCTGA-TTTGAAGCTACTTTATGTGGAGGAGGTTGAATTTTGGTTTGTGAAG-A- 214
|||||||| | |||||||||| ||||| ||| ||||||||||||||||||||||||| |
Sbjct 280 TGTTGTCT-ATTTTGAAGCTAATTTATCTGGTGGAGGTTGAATTTTGGTTTGTGAAGAAT 338
Query 215 --------ATTCAGCT-TTAGGAGATTCAAATGGTGGCTAGCAAATGAGTTATAGAAGCT 265
|||||||| || |||||||||||||||| || ||||||||||| ||||||||
Sbjct 339 TTGTGTGGATTCAGCTGTT-GGAGATTCAAATGGTGTCTTGCAAATGAGTTGTAGAAGCT 397
Query 266 AGTGAGAATTATATCT-GTG-GGTAATTCTTGTTAAAACGATGGTTGAAAGTGCTGCGTT 323
|||||||||||||| | || ||||| ||||| ||||| ||||||||||||||||||||
Sbjct 398 AGTGAGAATTATATATATTGTGGTAAGTCTTGCCAAAACAATGGTTGAAAGTGCTGCGTT 457
Query 324 CCCGGGAGGGTATTATCGGAATACTTTTGAAGCGCCTGATGAATCAGAGGGCTCTGGGAG 383
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 458 CCCAGGAGGGTATTATCGGAATACTTTTGAAGCGCCTGAGGAATCAGAGGGCTCTGGGAG 517
Query 384 CTCTGCACAGATTGATACTGAGGTCACTGCGTCTGAGAATTCAAGCACTCCTGCAAGAAA 443
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||
Sbjct 518 CTCTGCACAGATTGATACTGAGGTCACTGCGTCTGAGAATTCAAGTACTCCTGCACGGAA 577
Query 444 GTGTATTATGTTGAATTCTAATGATGAAGATCCTTATGGTGTTCAGAGACAAGTCATTTC 503
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 578 GTGTATTATGTTGAATTCGAATGATGAAGATCCTTATGGTGTTCAGAGACAAGTCATTTC 637
Query 504 CTTGTATAATATGTCACAATTTGAGAGGAAGGATTTGATTTATCGGCTTAAGTTGGAGCT 563
||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||| |
Sbjct 638 CTTGTATAACATGTCACAATCTGAGAGGAAGGATTTGATTTATCGGCTTAAGCTGGAGTT 697
Query 564 GGAGCAGACAAAGATAGTTCTTAGAAATGCTGAGTTGCAGAGGATGAACCCTGCTGCTGT 623
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 698 GGAGCAGACAAAGATAGTTCTTAAAAATGCTGAGTTGCAGAGAATGAACCCTGCTGCTGT 757
Query 624 GTCGTCTACTAGTGATAGGGTGGGTTTTAGCACTGCTCAAAAGCTGTCTTCTCGAGTCAG 683
||||||||||||||||||||||||||||||||||| ||||||| | || |||||||||||
Sbjct 758 GTCGTCTACTAGTGATAGGGTGGGTTTTAGCACTGGTCAAAAGATATCATCTCGAGTCAG 817
Query 684 CAATTCGAAGAAGCCATCTGATTTTGCAATGGGATCAGGGAAGAAAGTTCGGCATCAGAC 743
|||||||||||| |||||||||||||| |||| || ||||||||||||||||||||||
Sbjct 818 CAATTCGAAGAAACCATCTGATTTTGCTGTGGGTTCGGGGAAGAAAGTTCGGCATCAGAA 877
Query 744 TGGGAGTTCCCGTGGATGGAATCGTGGTACCTCGGGGAAGTTTGAGTCTTCGAAAGAGTC 803
||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 878 TGGGACTTCTCGTGGATGGAATCGTGGTACCTCAGGGAAGTTTGAGTCTTCGAAAGAGAC 937
Query 804 TATGACTAGCACTACTAATATTACACTGATGAAGCAATGTGATACGCTATTGAAAAAACT 863
||||||||||||| |||| ||||||||||||||||||||||| |||||| ||| ||||||
Sbjct 938 TATGACTAGCACTCCTAACATTACACTGATGAAGCAATGTGACACGCTACTGAGAAAACT 997
Query 864 GTGGTCTCATCCGCATTCTTGGGTTTTTCAGGCGCCAGTTGATGTAGTGAAACTGAACAT 923
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 998 GTGGTCTCATCCGCATTCTTGGGTGTTTCAGGCGCCAGTTGATGTAGTGAAACTGAACAT 1057
Query 924 ACCTGACTATCTCACTATTATCAAACATCCCATGGACTTGGGGACAGTAAAGAAGAACTT 983
||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1058 ACCTGACTATCTCACTACTATCAAGCATCCCATGGACTTAGGGACAGTAAAGAAGAACTT 1117
Query 984 AGCATCTGGTGTATACTCAAGCCCACATGAGTTTGCTGCAGATGTGAGGCTTACATTTAC 1043
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1118 AGCGTCTGGTGTATACTCAAGCCCACATGAGTTTGCTGCTGATGTGAGGCTTACATTTAC 1177
Query 1044 CAATGCAATGACATATAACCCTCCAGGACATGATGTTCACATTATGGGGGATATCCTTAG 1103
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1178 CAATGCGATGACATATAACCCTCCAGGACATGATGTTCACATTATGGGGGATATCCTTAG 1237
Query 1104 TAAATTATTTGAAGCGCGGTGGAAAACTATCGAAAAGAAATTACCAGCTTGTAACATGCA 1163
||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||
Sbjct 1238 TAAATTATTTGAAGCGCGGTGGAAAACTATCAAAAAGAAATTACCACCTTGTAGCATGCA 1297
Query 1164 AACGTTGCCTGCAATATCATTGGAGCCCAATGATGAAACGAAAGCTGCTATATCTGTCCC 1223
||||||||||||| || ||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1298 AACGTTGCCTGCAGTAACATTGGAGCCCAATGATGAAAGGAAAGCTGCTATATCTGTACC 1357
Query 1224 TCCAGCGAAGAAGAGAAAGATGGCTTCACCCATTAGAGAGAGTGTTCCAGAACCCGTGAA 1283
||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1358 TCCGGCGAAGAAGAGAAAGATGGCTTCACCCGTTAGAGAGAGTGTTCCAGAACCGGTGAA 1417
Query 1284 GCCACTTATGACTGCAGAGGAGAGGCATAGATTGGGCAGACAACTCGAATCACTACTAGA 1343
|||||||||||| | || ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1418 GCCACTTATGACAGAAGTGGAGAGGCATAGATTGGGCAGACAACTCGAATCACTACTCGA 1477
Query 1344 CGAACTTCCTGCACATATCATTGACTTTTTGAGGAAACACAGTTCAAATGGAGGAGAAAT 1403
||||||||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||
Sbjct 1478 CGAACTTCCTGCACATATCATTGACTTCTTGAAGAAACACAATTCAAATGGCGGAGAAAT 1537
Query 1404 TGCGGAAGACGAAATTGAGATAGACATTGATGTTCTCAGTGATGAAGTACTGGTCACTCT 1463
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1538 TGCAGAAGACGAAATTGAGATAGACATTGATGTTCTCAGTGATGAAGTACTGGTCACTCT 1597
Query 1464 TCGAAACCTTCTAGATGAATATATACAAAATAAAGAAGCAAAGCAGTCGAATGTTGAACC 1523
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 1598 TCGAAACCTTCTAGATGAATATATACAAAACAAAGAAGCAAAGCAGACGAATGTTGAACC 1657
Query 1524 ATGTGAAATAGAGCTTATTAATGGATCAGGACCGAGCAATTCGTCGCTGCAACGAGGAAA 1583
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1658 ATGTGAAATAGAGCTTATTAATGGATCACGACCGAGCAATTCGTCGCTGCAAAGAGGAAA 1717
Query 1584 TGAATTAGCTGATGAGTATGTCGGTGGGAATGAACCTCCTATCTCAAGGAGCTCCAGTGA 1643
|||| | |||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 1718 TGAAATGGCTGATGAGTATGTCGATGGGAATGAACCGCCTATCTCAAGGAGCTCCAGTGA 1777
Query 1644 TTCGGACACTGGTGGCTCAGAAGATCAATCTGATGATGCTAAACCCATGGTTCAAGAGGA 1703
|||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||| |||
Sbjct 1778 TTCGGATTCTGGTAGCTCGGAAGATCAATCTGATGACGCTAAACCCATGGTTCAAGGGGA 1837
Query 1704 TTCTTCCAAGATGCCTGAAACTGCAAATTCTGAGGCGCAAAGAGATGAAAATACAAGAAT 1763
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1838 TTCTTCCAAGATGCCTGAAACTGCAAACTCTGAGGCGCAAAGAGATGAAAATACAAGAAT 1897
Query 1764 TTCTGATCTTTTTGAAGGAAGTCAATCTACTGGTGCG-TTGGAGCAGATGGATATTTGTT 1822
| ||||||||||| || |||||||||||||||||| ||| ||||||||||||||||||
Sbjct 1898 TGATGATCTTTTTGTTGGGAGTCAATCTACTGGTGCGCTTG-AGCAGATGGATATTTGTT 1956
Query 1823 CTCAGCAAAAGCCTAGTTCTGATGAATCAGATATCCAACATGAGGGAAATATATTAGAGA 1882
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1957 CTCAGCAAAAGCTTAGTTCTGATGAATCAGATGGCCAACATGAGGGAAATATATTAGAGA 2016
Query 1883 CTCCAGTTTCATCTGAGAAGCGCTATAGAGCTGCGTTGTTGAAGAACCGGTTTGCAGATA 1942
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2017 CTCCAGCTTCATCTGAGAAGCGCTATAGAGCTGCGCTGTTGAAGAACCGGTTTGCAGATA 2076
Query 1943 TCATTCTAAAAGCACGCGAGAAACCTCTTCCACAGAATGGTATTAAGGGCGATCCagaaa 2002
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2077 TCATTCTAAAAGCACGAGAGAAACCACTTCCACAGAATGGTATTAAGGGCGATCCAGAAA 2136
Query 2003 ggctgcgtaaagaaagagaagaactcgaattgcagaagaagaaagaaaaagCGCGACTAC 2062
||||||||||||||||||||||||||| | |||||||||||||||| |||||||| ||||
Sbjct 2137 GGCTGCGTAAAGAAAGAGAAGAACTCGTACTGCAGAAGAAGAAAGAGAAAGCGCGTCTAC 2196
Query 2063 AAGCTGAAGCAAAGGCTGCTGAAGATGCTCGTCGCCAAGCTGAAGCAGAGGCCGCTGCAG 2122
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2197 AAGCTGAAGCAGAGGCTGCTGAAGATGCTCGTCGCCAAGCTGAAGCAGAAGCCGCTGCAG 2256
Query 2123 AAGCTGCTGCTGAGGCTAAGCGGAAGAGAGAACTCGAAAGAGAAGCCGCTCGTCAAGCTT 2182
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2257 AAGCTGCTGCTGAGGCTAAGCGGAAGAGAGAACTCGAAAGAGAAGCCGCTCGCCAAGCTT 2316
Query 2183 TATTGAAGATGGAGAAAACTGTAGAGATCAATGAGAACTCACGGTTTCTCGAGGACCTAG 2242
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2317 TATTGAAGATGGAGAAAACTGTAGAGATTAATGAGAACTCACGGTTTCTCGAGGACCTAG 2376
Query 2243 AGATGCTGAGTTCGAGTGCACCTGAGCAATTACCAAGCTCAGCAGATGAAACCAGCCCCG 2302
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 2377 AGATGCTGAGTTCGAGTGCACCTGAGCAATTACCAAGCTCAGCCGAAGAAACCAGCCCCG 2436
Query 2303 AGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCAGAGGAAGTAACCCTCTTGAGCAAC 2362
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2437 AGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCAGAGGAAGCAACCCACTTGAGCAAC 2496
Query 2363 TCGGACTGTACATGAAACAAGATGATGATGAAGAAGAACCCGAAGCTCATGCGGTTCCAA 2422
||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||
Sbjct 2497 TCGGACTGTACATGAAACAAGATGATGATGAAGAAGAGCCCGAAGCTCCTGCTGTTCCAA 2556
Query 2423 AACCTGATGAAACCAGCACCGAGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCGGAG 2482
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2557 AACCTGATGAAACCAGCACCGAGAGACCTTTAGACGCACTTGGAAGTTTCAAACTCGGAG 2616
Query 2483 AAAGTAACCCTCTGGAGCAACTCGGACTGTACATGAAACAAGACGACGATGATGAAGAAG 2542
|| |||| || ||||||||||| ||||||||||||||||||||||||| ||| |||||||
Sbjct 2617 AATGTAATCCGCTGGAGCAACTTGGACTGTACATGAAACAAGACGACGGTGAAGAAGAAG 2676
Query 2543 AACCCGAGGCTCCTGCGTTTCCAAAACCCGATGAAACCAGCCCCGAGAGACCTTTAGACG 2602
||||||||||||||| | ||||||||||| |||||||||||| |||||||||| ||||||
Sbjct 2677 AACCCGAGGCTCCTGTGGTTCCAAAACCCAATGAAACCAGCCTCGAGAGACCTGTAGACG 2736
Query 2603 CATTTGGAAGTTTCAACATCAAAGGAAGTAGTAACCCTCTTGAGCAACTCGGACTGTACA 2662
||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||
Sbjct 2737 CATTTGGAAGTTTCAACCTCAAAGGAAGTA--A-CCCTCTTGAGCAACTCGGACTGTACA 2793
Query 2663 TGAAACAAGACGATGATGAAGAAGAACACGAGGGTCCCGCTGTTCCAAACCTAGCCAACG 2722
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 2794 TGAAACAAGACGATGATGAAGAAGAACCCGAGGCTCCCGCTGTTCCAAACCTAGCCAACG 2853
Query 2723 ACGTGGAAGAAGGTGAAATCGATTGATACAAAAGAAGTGTATAAAATATATACATGTATT 2782
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2854 ACGTGGAAGAAGGTGAAATCGATTGA-ACAAAAGAAGTGTATAAAATATATACATGTATT 2912
Query 2783 ATATATAAAACAGTAGCCAGGGCAGGTACACACAGACGCAGGAAATGAAGGTCTTAGCCC 2842
|||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 2913 ATATATAAAACAATAGCCAGGGCAGGTACAAACAGACGCAAGAAATGAAGGTCTTAGCCC 2972
Query 2843 TTCTTAAGAGAAGGTCCAATCTTTGGCTCATTGTTTAATGAGTTTTGGAATGGATCTCTC 2902
||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 2973 TTCTTAAGAGAAGATCCAATATGTGGCTCATTGTTTAATGAGTTTTGGAATGGATCTCTC 3032
Query 2903 TTAAGCCAGTGTGGTTGTTAAATTATGTAAAACACGAAGCAAACGCTTAGAAGCTTTTTG 2962
||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 3033 TTAAGCCAGTGTGGT-GTTTAATTATGTAAAACACAAAGCAAACGCTTAGAAGCTTTTTG 3091
Query 2963 CCTCGAGACTTCATGAAGAGTCCCTTAGTGTATGATTATT 3002
|| |||||||||||||||||||||||||||||||||||||
Sbjct 3092 CCACGAGACTTCATGAAGAGTCCCTTAGTGTATGATTATT 3131
Score = 337 bits (182), Expect = 5e-91
Identities = 254/287 (89%), Gaps = 12/287 (4%)
Strand=Plus/Plus
Query 2287 GATGAAACCAGCCCCGAGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCAGAGGAA-G 2345
|||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| || |
Sbjct 2562 GATGAAACCAGCACCGAGAGACCTTTAGACGCACTTGGAAGTTTCAAACTCGGAG-AATG 2620
Query 2346 TAACCCTCTTGAGCAACTCGGACTGTACATGAAACAAGATGA---TGATGAAGAAGAACC 2402
||| || || |||||||| |||||||||||||||||||| || ||| |||||||||||
Sbjct 2621 TAATCCGCTGGAGCAACTTGGACTGTACATGAAACAAGACGACGGTGAAGAAGAAGAACC 2680
Query 2403 CGAAGCTCATGCGGTTCCAAAACCTGATGAAACCAGCAC-CGAGAGACCTTTAGACGCAC 2461
||| |||| || |||||||||||| ||||||||||| | |||||||||| ||||||||
Sbjct 2681 CGAGGCTCCTGTGGTTCCAAAACCCAATGAAACCAGC-CTCGAGAGACCTGTAGACGCAT 2739
Query 2462 TTGGAAGTTTCAACCTCGGAGAAAGTAACCCTCTGGAGCAACTCGGACTGTACATGAAAC 2521
||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||
Sbjct 2740 TTGGAAGTTTCAACCTCAAAGGAAGTAACCCTCTTGAGCAACTCGGACTGTACATGAAAC 2799
Query 2522 AAGACGACGATGATGAAGAAGAACCCGAGGCTCCTGC-GTTTCCAAA 2567
||||||| |||||||||||||||||||||||| || ||| |||||
Sbjct 2800 AAGACGA---TGATGAAGAAGAACCCGAGGCTCCCGCTGTT-CCAAA 2842
Score = 311 bits (168), Expect = 3e-83
Identities = 250/287 (87%), Gaps = 15/287 (5%)
Strand=Plus/Plus
Query 2431 GAAACCAGCACCGAGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCGGAGAAAGTAAC 2490
||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct 2424 GAAACCAGCCCCGAGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCAGAGGAAGCAAC 2483
Query 2491 CCTCTGGAGCAACTCGGACTGTACATGAAACAAGACGACGATGATGAAGAAGAACCCGAG 2550
|| || ||||||||||||||||||||||||||||| || |||||||||||| |||||
Sbjct 2484 CCACTTGAGCAACTCGGACTGTACATGAAACAAGATGA---TGATGAAGAAGAGCCCGAA 2540
Query 2551 GCTCCTGC-GTTTCCAAAACCCGATGAAACCAGCCCCGAGAGACCTTTAGACGCATTTGG 2609
|||||||| ||| |||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct 2541 GCTCCTGCTGTT-CCAAAACCTGATGAAACCAGCACCGAGAGACCTTTAGACGCACTTGG 2599
Query 2610 AAGTTTCAA-CATCAAAGGAAGTAGTAACCCTCTTGAGCAACTCGGACTGTACATGAAAC 2668
||||||||| | || || || | |||| || || |||||||| ||||||||||||||||
Sbjct 2600 AAGTTTCAAAC-TCGGAG-AA-T-GTAATCCGCTGGAGCAACTTGGACTGTACATGAAAC 2655
Query 2669 AAGACGA---TGATGAAGAAGAACACGAGGGTCCCGCTG-TTCCAAA 2711
||||||| ||| |||||||||| ||||| ||| | || |||||||
Sbjct 2656 AAGACGACGGTGAAGAAGAAGAACCCGAGGCTCCTG-TGGTTCCAAA 2701
Score = 202 bits (109), Expect = 2e-50
Identities = 130/140 (93%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 2288 ATGAAACCAGCCCCGAGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCAGAGGAAGTA 2347
|||||||||||| |||||||||| |||||||| |||||||||||||||||| ||||||||
Sbjct 2707 ATGAAACCAGCCTCGAGAGACCTGTAGACGCATTTGGAAGTTTCAACCTCAAAGGAAGTA 2766
Query 2348 ACCCTCTTGAGCAACTCGGACTGTACATGAAACAAGATGATGATGAAGAAGAACCCGAAG 2407
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 2767 ACCCTCTTGAGCAACTCGGACTGTACATGAAACAAGACGATGATGAAGAAGAACCCGAGG 2826
Query 2408 CTCATGCGGTTCCAAAACCT 2427
||| || |||||||| |||
Sbjct 2827 CTCCCGCTGTTCCAAA-CCT 2845
Score = 178 bits (96), Expect = 3e-43
Identities = 130/146 (89%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 2570 CCGATGAAACCAGCCCCGAGAGACCTTTAGACGCATTTGGAAGTTTCAACATCAAAGGAA 2629
|||| |||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |
Sbjct 2419 CCGAAGAAACCAGCCCCGAGAGACCTTTAGACGCACTTGGAAGTTTCAACCTCAGAGG-A 2477
Query 2630 GTAGTAACCCTCTTGAGCAACTCGGACTGTACATGAAACAAGACGATGATGAAGAAGAAC 2689
|| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 2478 --AGCAACCCACTTGAGCAACTCGGACTGTACATGAAACAAGATGATGATGAAGAAGAGC 2535
Query 2690 ACGAGGGTCCCGCTGTTCCAAA-CCT 2714
||| | ||| ||||||||||| |||
Sbjct 2536 CCGAAGCTCCTGCTGTTCCAAAACCT 2561
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 149246655425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5