BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484562
Length=2595
Score E
Sequences producing significant alignments: (Bits) Value
AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor fa... 3299 0.0
AT5G48410.1 | Symbols: ATGLR1.3, GLR1.3 | glutamate receptor 1.... 2926 0.0
AT3G07520.1 | Symbols: ATGLR1.4, GLR1.4 | glutamate receptor 1.... 536 4e-151
> AT5G48400.2 | Symbols: ATGLR1.2, GLR1.2 | Glutamate receptor
family protein | chr5:19616244-19619246 FORWARD LENGTH=2604
Length=2604
Score = 3299 bits (1786), Expect = 0.0
Identities = 2352/2623 (90%), Gaps = 47/2623 (2%)
Strand=Plus/Plus
Query 1 ATGGAGGGATTTTGTATTCAAAACTCAGTTCTGCTCTCATTTCTTCTTGTTCTGCATCTC 60
|||| | || |||||||||||| | || || |||| || |||||||||||||||| | ||
Sbjct 1 ATGGTGAGAATTTGTATTCAAACCCCAATTTTGCTATCGTTTCTTCTTGTTCTGCTTTTC 60
Query 61 TTACTAATCTCCAATTGTTTTGCTTCGAGTCAAAACCGCGACGTTGATGAACGGGTTCTG 120
|| | |||||||| ||||||||||||||||||||| ||| | |||| ||| | |
Sbjct 61 TT-C--ATCTCCAACTGTTTTGCTTCGAGTCAAAACAACGATGATGATAAAC--G----G 111
Query 121 ATCCGGGTCCGGGTCGGTTTGATTTTGGATTTGGGTTCCGTGGAAGGAAAGATAGTGAGA 180
|| |||||||||||||| ||| ||||||||||||||||||||||||| ||||||||| |
Sbjct 112 ATTCGGGTCCGGGTCGGGTTGGTTTTGGATTTGGGTTCCGTGGAAGGGAAGATAGTGCGG 171
Query 181 AGCTCTGTTTCCATGGCGCTTTCCGATTTCTACGTCATTAACAGTCATTACAAAACAAGA 240
|| |||||||||||||| ||||| |||||||||| || | ||| | | ||||||||||||
Sbjct 172 AGTTCTGTTTCCATGGCTCTTTCTGATTTCTACGACAATCACAATGACTACAAAACAAGA 231
Query 241 GTCTCT-TTTTCAGTTAAAAACTCTCATGGAGAGCCTCTTCTTGCTCTCGGTTCTGCTAT 299
||||| |||| ||| | | | |||||||||||||||||||||||||| | ||| | | |
Sbjct 232 CTCTCTCTTTT-AGTCAGAGATTCTCATGGAGAGCCTCTTCTTGCTCTTGATTCAGTTGT 290
Query 300 AGATTTGCTGCAAACTGAAGGAGTAG-AAGCAATTATTGGCGGGAATTCGTTGCTGGAAA 358
||||||||||||||| |||||||| | ||||||| ||||||||||| |||||||| |||
Sbjct 291 AGATTTGCTGCAAACAGAAGGAGT-GCAAGCAATAATTGGCGGGAACTCGTTGCTAGAAG 349
Query 359 CGAAGCTTTTGGCGGAACTTGGCGAGAAAGCTAGGGTTCCTGTGATTTCACTAAACTCTC 418
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 350 CGAAGCTTTTGGCGGAACTTGGAGAGAAAGCTAGGGTTCCTGTGATTTCACTTAACTCTC 409
Query 419 CGATTTCA-TGTTCATTGAGCAGATACAGTTACTTGATCCAAGCCACGCATGATTCTGCC 477
| || ||| || |||||||||| ||||| | |||||||||||||||| ||| | ||||||
Sbjct 410 CCATGTCATTG-TCATTGAGCAAATACACTCACTTGATCCAAGCCACACATAACTCTGCC 468
Query 478 TCTGAGGCTAAGGGAATTACAGCTTTGATCAATGGGTTTGATTGGAACAGTGTTGCTCTT 537
||||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 469 TCTGAGGTTAAAGGAATTACAGCTTTCCTCCATGGGTTTGATTGGAACAGTGTTGCTCTT 528
Query 538 G-TATATGAAGATCATGATGATTGGAGAGAGACTATGTATTTTATGGTGGAGCATTTACA 596
| | || |||||||| ||||| |||||||||| |||| ||||||||||||| ||||| ||
Sbjct 529 GTTTTA-GAAGATCACGATGACTGGAGAGAGAGTATGCATTTTATGGTGGACCATTTCCA 587
Query 597 TGAGAACAACGTTCGTGTACAGTCCAAGATTGGTTTTACTGTCTCTTCAAGTGAAGATT- 655
|||||||||||||| ||||||||||||| ||| ||||| |||| |||| ||||| ||||
Sbjct 588 TGAGAACAACGTTCATGTACAGTCCAAGGTTGCTTTTAGTGTCACTTCGAGTGAGGATTC 647
Query 656 TTGTGACGGATCGGTTACAGAAGCTGAAGGAATTGGGAACAACTGTCTTTGTTGTTCACT 715
|| ||| |||||| |||| | |||| ||||| ||||||||||||||||||||||||||||
Sbjct 648 TT-TGATGGATCGATTACGGGAGCTTAAGGACTTGGGAACAACTGTCTTTGTTGTTCACT 706
Query 716 TGTCTGAAGTTATTGCAACTCATCTCTTCCCATGTGCTGAGAAATTAGGGTTGATGGGTG 775
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 707 TGTCTGAAGTTATTGCAACTCGTCTCTTCCCATGTGCTGAGAAATTAGGGATGATGGGTG 766
Query 776 AAGGGTTTGCTTGGATTCTCACTGCCAAAAGCATGGGCACTTTTCATGA--A-TCCATTG 832
||||||||||||||||||| ||| ||| ||||||| ||| ||||||||| | | |||||
Sbjct 767 AAGGGTTTGCTTGGATTCTTACTTCCAGAAGCATGAGCAGTTTTCATGATCAGTTCATTG 826
Query 833 ATGATTTCGCAAAGGAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTATGTAACAATGT 892
| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 827 ACGATTTAACAAAGGAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTATATACCAATGT 886
Query 893 CTAAAGAACTTCAAAATTTCACTTTGAGATGGAGAAGATCACTGCCAGTTGAAGAA---A 949
| ||||| ||||| || ||||||||||||||||||| | |||| || ||||||||| |
Sbjct 887 CAAAAGAGCTTCACAACTTCACTTTGAGATGGAGAAAAACACTCCCTGTTGAAGAAGTTA 946
Query 950 C-----G-GAGATAACTCGATTGAGTATCTCTGGTGTATGGGCTCATGATATCGCTTGGG 1003
| | ||||| ||||| |||||||||||||| ||||||||||||||| ||||||||
Sbjct 947 CTGGGAGTGAGATTACTCGGTTGAGTATCTCTGGCGTATGGGCTCATGATGTCGCTTGGA 1006
Query 1004 GTCTGGCGAGGGCAGCTGAAGTTATAAGGATGCCAAATGT-ATCATCAAATTTCCTTGAG 1062
|||||||||| ||||||||||| | ||||||||||| ||| | |||||| | ||||||||
Sbjct 1007 GTCTGGCGAGTGCAGCTGAAGTGACAAGGATGCCAACTGTGA-CATCAACTCTCCTTGAG 1065
Query 1063 GCAATCACAGAGAGTAGGTTTAAGGGTTTGAGGGGTGA-TTTCCAATTGCATGATAAGAA 1121
|| || | ||| || |||||||||||| |||| ||| | ||| || ||| |||||| |||
Sbjct 1066 GCCATAAAAGAAAGCAGGTTTAAGGGTCTGAGTGGTAACTTT-CAGTTGGATGATATGAA 1124
Query 1122 GTTGTTATCAAACAAGTTTGAGATTGTGAATATGATAGGATCAGGTGAGAGAAGGGTAGG 1181
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1125 GTTGTTATCAGACAAGTTTGAGATTGTGAATATGATAGGATCAGGTGAGAGAAGGGTAGG 1184
Query 1182 ATTTTGGAATTCTAATGGTAGTTTCAGCAATAGAAGACAGTTATCTTCTACTCATGACAA 1241
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1185 ATTCTGGAATTCTAATGGTAGTTTCAGCAATAGAAGACAATTATCTTCTACTCATGACAA 1244
Query 1242 GCTGGAGACCATAATTTGGCCTGGTGGGTCTGCTAAAAGTCCGAAAGGGAGTAGCCTAAG 1301
|||||||||||||||||||| |||||||||||| |||||||||||||||| || |||||
Sbjct 1245 TCTGGAGACCATAATTTGGCCCGGTGGGTCTGCTCAAAGTCCGAAAGGGAGAAGTCTAAG 1304
Query 1302 AGAGAGCGGTAGACAAAAGCTGAGGGTTCTTGTTACATCTAGCAATAGATTCCCAAGACT 1361
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1305 AGAGAGCGGTAGAAAAAAGCTTAGGGTTCTTGTTACATCTAGCAATAGATTCCCAAGACT 1364
Query 1362 GATGAAGGTAGAGACTGATTCAGTAACAAATGATATAACAAATGTCGAAGGGTTTTGTAT 1421
|||||| || ||||||||| || ||||| |||| ||||||| |||||||||||| |||||
Sbjct 1365 GATGAAAGTGGAGACTGATCCAATAACACATGAGATAACAATTGTCGAAGGGTTCTGTAT 1424
Query 1422 AGAAGTCTTTCAGGCTTCCATTGCACCTTTTAATTATGAAGTGGAGTACATACGTTGGCG 1481
||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||
Sbjct 1425 AGAAGTCTTTCAGGCATCCATTGCACCTTTCAACTATGAAGTGGAGTACATACGTTGGCT 1484
Query 1482 CAATGGAAGTAACTACGA-CAATCTTGCATATGCACTTCATAGCCAGAAAGACAAATATG 1540
|||||||| ||||||| | ||| |||||||||||||||||||||||||||||||||||||
Sbjct 1485 CAATGGAACTAACTAC-ACCAAGCTTGCATATGCACTTCATAGCCAGAAAGACAAATATG 1543
Query 1541 ATG-TGGCCGTGGGAGATATTACAATCACTTCTAATAGATCGACCTATGTTGATTTTACG 1599
||| | || ||||||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct 1544 ATGCT-GCTGTGGGAGATATTACAATTACTTCCGATAGATCGATGTATGTTGATTTTACG 1602
Query 1600 TTGCCATTCACCGAAATGGGTCTTGGGATTGTAGCAGCAACGGAGAGAAGTATGTGGGTG 1659
||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1603 TTGCCATACACTGAAATGGGTCTTGGAATTGTAGCAGCAAAGGAGAGAAGTATGTGGGTG 1662
Query 1660 TTCTTTCAACCTCTAACACCAGATCTTTGGCTAACAAGTGCAGCTTTCTTTGTCTTGACG 1719
||||| ||||||||||||||| | |||||| |||||||||||||||||||||||||||||
Sbjct 1663 TTCTTCCAACCTCTAACACCAAACCTTTGGATAACAAGTGCAGCTTTCTTTGTCTTGACG 1722
Query 1720 GGTATTATAGTTTGGTTGATAGAAAGA-CATGAGAACACTGAGTTCCAGGGATCTTGGTC 1778
||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||| |
Sbjct 1723 GGTATTATAGTTTGGTTGATAGAAAGAGC-TGAGAACAAAGAGTTCCAAGGATCTTGGCC 1781
Query 1779 ACAGCAAATTGGAGTTGTGCTTTGGTTTGGCTTCTCTACCCTTGTTTATGCTCATAGGGA 1838
|| || |||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1782 TCAACAGATTGGAGTTGTGATTTGGTTTGGCTTCTCTACCCTTGTTTATGCTCATCGGGA 1841
Query 1839 GAGGCTAAAACACAACTTATCAAGATTTGTAGTTACAGTTTGGGTATTTGCAGTGCTCAT 1898
|| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1842 GAAGCTACAACACAACTTATCAAGATTTGTAGTTACAGTTTGGGTATTTGCGGTGCTCAT 1901
Query 1899 ATTGGTTACAAGTTACACTGCAACATTGACATCAATGATGACAGTGCAACAAATACGATT 1958
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1902 ATTGGTTACAAGTTACACTGCAACATTGACATCAATGATGACGGTGCAACAAATACGATT 1961
Query 1959 CAACACTAATGAAGACTACGTGGGTTACCTCTCGGGCTCCCTCATCACAAACACGGCCCT 2018
|||| | |||||||| || |||||| |||||||||| ||||||||| |||| |||||||
Sbjct 1962 CAACGCCAATGAAGATTATGTGGGTCACCTCTCGGGATCCCTCATCGCAAATGCGGCCCT 2021
Query 2019 CACCAATTCCAGCCTCCGAGCAATGAGATTATTGGGTCTCAATACTTCAGAAGATTATGC 2078
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2022 CACCAATTCCAGCCTCAGAGCAATGAGATTATTGGGTCTCAATACTTCAGAAGATTATGC 2081
Query 2079 TCAAGCATTGTTGAACAAAAGTGTCTCATATATTGTCAGTGAGTTGCCATACCTCAAGGT 2138
|||||| ||| |||| |||||||||||||||||||| ||||||||||||||||| || |
Sbjct 2082 TCAAGCTTTGATGAATAAAAGTGTCTCATATATTGTTAGTGAGTTGCCATACCTGAAAAT 2141
Query 2139 CCTCCTTGGCGAGTATCCTTCACATTTTCTCATGGTCAAGACACAATCTACCACCAATGG 2198
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2142 CCTCCTTGGCGAGAATCCTGGACATTTTCTCATGGTCAAGACACAATCTACCACCAATGG 2201
Query 2199 TTTTGGCTTTATGTTCCAGAAGGGATCCGAGTTGGTGCCTAATGTGTCCCGAGAGATTGC 2258
||||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||
Sbjct 2202 TTTTGGCTTCATGTTCCAGAAGGGGTCCGAGTTGGCGCCTAATGTGTCCCGGGAGATTGC 2261
Query 2259 GAAGCTAAGGACGAGCGAGCGGCTAAATGAGATGGAGAAAAGGTGGTTTGATAAACAACT 2318
|||||| ||||| |||||| ||||||| |||||||||| ||| |||||||||||||| ||
Sbjct 2262 GAAGCTGAGGACAAGCGAGAGGCTAAACGAGATGGAGAGAAGATGGTTTGATAAACAGCT 2321
Query 2319 CCCATACACAACTGATGATACATCAAATCCTATAACCCTTTATAGATTCCGCGGTTTGTT 2378
||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2322 TCCATACACAACCGATGATACATCAAATCCTATAACCCTATATAGATTCCGTGGTTTGTT 2381
Query 2379 TATGATCACCGGAGTTTCATTCGCTTTCGCTCTTGCGGTACTTCTCATTCTTTGGCTCCG 2438
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2382 TATGATCACCGGAGTTTCATTCGCTTTCGCTCTTGCAGTACTTCTCATTCTTTGGCTCCG 2441
Query 2439 AGAAAAATGGAAAATTCTTGTGAATTCGGTCAATATATACCTCTCACAACGACTTAGACA 2498
||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2442 AGAAAGATGGGAAATCCTTGTGAATTCGGTCAATATATACTTCTCACAACGACTTAGACA 2501
Query 2499 TTTCATGATCCTCTTCGCAAGAACTATTCATCCTATTCCCCTCG------ATAACCCTAT 2552
||||| |||||||||| |||||||||| ||||||| |||||||| ||||||| ||
Sbjct 2502 TTTCAGGATCCTCTTCACAAGAACTATCCATCCTAGTCCCCTCGGCCTCGATAACCCCAT 2561
Query 2553 TGGCCAGAATGTGGTTCAAATGGCTCATCGTAACAGACGATAG 2595
|||| |||||| ||||||||||||||| |||||||||||||||
Sbjct 2562 TGGCGAGAATGCGGTTCAAATGGCTCAACGTAACAGACGATAG 2604
> AT5G48410.1 | Symbols: ATGLR1.3, GLR1.3 | glutamate receptor
1.3 | chr5:19620267-19623425 FORWARD LENGTH=2780
Length=2780
Score = 2926 bits (1584), Expect = 0.0
Identities = 2284/2619 (87%), Gaps = 60/2619 (2%)
Strand=Plus/Plus
Query 1 ATGGAGGGATTTTGTATTCAAAACTC--AGTTCTGCTCTCATTTCTTCTTGTTCTGCATC 58
|||||| |||||||||||| |||| | | || |||| || |||||||||||| ||| ||
Sbjct 50 ATGGAGAGATTTTGTATTC-AAACCCAAACTT-TGCTATCGTTTCTTCTTGTTTTGCTTC 107
Query 59 TCTTACTAATCTCCAATTGTTTTGCTTCGAGTCAAAACCG-CGACGTTGATGAACGGGT- 116
|||| | ||||||| | ||||||||| | | |||| || ||||||||||| | |||
Sbjct 108 TCTT-C--ATCTCCAGGTCTTTTGCTTCTACT-AAAAACGACGACGTTGATGGA--GGTA 161
Query 117 -TCTGATCCGGGTCCGGGTCGGTTTGATTTTGGATTTGGGTTCCGTGGAAGGAAAGATAG 175
| | | | | |||||||||| ||| ||||||||||||||||| || |||| |||||||
Sbjct 162 AACGGGTTCAGATCCGGGTCGGGTTGGTTTTGGATTTGGGTTCCTTGAAAGGGAAGATAG 221
Query 176 TGAGAAGCTCTGTTTCCATGGCGCTTTCCGATTTCTACGTC-ATTAACAGTCATTACAAA 234
||| || ||||||||||||||| |||||| ||||||||| | ||| | | | ||||||||
Sbjct 222 TGAAAAACTCTGTTTCCATGGCTCTTTCCTATTTCTACG-CTATTCATAATGATTACAAA 280
Query 235 ACAAGAGTCTCTTTTTCAGTTAAAAACTCTCATGGAGAGCCTCTTCTTGCTCTCGGTTCT 294
|||||||||||| ||||| | | |||||||||||||||||||||||||||||| | ||||
Sbjct 281 ACAAGAGTCTCTGTTTCACTCAGAAACTCTCATGGAGAGCCTCTTCTTGCTCTTGCTTCT 340
Query 295 GCTATAGAT-TTGCTGCAAACTGAAGGAGTAGAAGCAATTATTGGCGGGAATTCGTTGCT 353
||| ||||| || ||| ||||||||||||||||||| |||||||||||||| |||||| |
Sbjct 341 GCTGTAGATCTT-CTGAAAACTGAAGGAGTAGAAGCGATTATTGGCGGGAACTCGTTGTT 399
Query 354 GGAAACGAAGCTTTT-GGCGGAACTTGGCGAGAAAGCTAGGGTTCCTGTGATTTCACTAA 412
||| |||||||||| || ||||||||| |||||||||||||||||| ||||||||||
Sbjct 400 AGAAGCGAAGCTTTTAGG-GGAACTTGGAGAGAAAGCTAGGGTTCCTATGATTTCACTTG 458
Query 413 ACTCTCCGATTTCA-TGTTCATTGAGCAGATACAGTTACTTGATCCAAGCCACGCATGAT 471
|||||||| ||||| || ||||| |||| ||||| | |||||||||||||||| ||||||
Sbjct 459 ACTCTCCGTTTTCATTG-TCATTAAGCAAATACACTCACTTGATCCAAGCCACACATGAT 517
Query 472 TCTGCCTCTGAGGCTAAGGGAATTACAGCTTTGATCAATGGGTTTGATTGGAACAGTGTT 531
||| |||||||||| ||||| |||||| |||| || |||| |||||||||||||||||||
Sbjct 518 TCTACCTCTGAGGCAAAGGGGATTACATCTTTTATTAATGTGTTTGATTGGAACAGTGTT 577
Query 532 GCTCTTGTATATGAAGATCATGATGATTGGAGAGAGACTATG-TATTTTATGGTGGAGCA 590
|||||||| ||||||||||||||||| |||||||||| |||| | ||| ||||||||||
Sbjct 578 GCTCTTGTTTATGAAGATCATGATGACTGGAGAGAGAGTATGCAACTTT-TGGTGGAGCA 636
Query 591 TTTACATGAGAACAACGTTCGTGTACAGTCCAAGATTGGTTTTACTGTCTCTTCAAGTGA 650
||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 637 TTTTCATGAGAACGGTGTTCGTGTACAGTCCAAGGTTGGTTTTACTGTCTCTTCTAGTGA 696
Query 651 AGATTTTGTGACGGATCGGTTACAGAAGCTGAAGGAATTGGGAACAACTGTCTTTGTTGT 710
|||||||||| || |||||||||| |||||||||| ||||| || ||||||||||||||
Sbjct 697 GGATTTTGTGATGGGTCGGTTACAGCAGCTGAAGGACTTGGGGACTACTGTCTTTGTTGT 756
Query 711 TCACTTGTCTGAAGTTATTGCAACTCATCTCTTCCCATGTGCT-GAGAAATTAGGGTTGA 769
|||||||||||||||||||||||||||| | |||||||||||| | || |||||||||||
Sbjct 757 TCACTTGTCTGAAGTTATTGCAACTCATTTATTCCCATGTGCTCG-GAGATTAGGGTTGA 815
Query 770 TGGGTGAAGGGTTTGCTTGGATTCTCACTGCCAAAAGC-ATGGGCA-CTTTTCATGA-AT 826
||||||| ||||||| |||||| || ||||| |||| | ||| || | || ||||| |
Sbjct 816 TGGGTGATGGGTTTGTTTGGATCCTGACTGCTAAAA-CTATGAACAGC-TTCCATGAGA- 872
Query 827 CCATTGATGATTTCGCAAAGGAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTATGTAA 886
||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
Sbjct 873 ACATTGATGATTTCACAAAGCAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTACATTC 932
Query 887 CAATGTCTAAAGAACTTCAAAATTTCACTTTGAGATGGAGAAGATCACTGCCAGTTGAAG 946
||||||||| ||| |||||||||||||||||||||||||||| |||| |||| |||||||
Sbjct 933 CAATGTCTATAGAGCTTCAAAATTTCACTTTGAGATGGAGAAAATCATTGCCTGTTGAAG 992
Query 947 AAACGGAGATAACTCGATTGAGTATCTCTGGTGTATGGGCTCATGATATCGCTTGGGGTC 1006
|| ||||| ||||||| |||||||||||||| |||||||||| |||||||||| | ||
Sbjct 993 AAGCGGAGCTAACTCGGTTGAGTATCTCTGGCATATGGGCTCACGATATCGCTTTTGCTC 1052
Query 1007 TGGCGAGGGCAGCTGAAGTTATAAGGATGCCAAATGT-ATCATCAAATTTCCTTGAGGCA 1065
||||||| ||||| ||||||||||||||||||||||| | |||||| | ||||||||| |
Sbjct 1053 TGGCGAGAGCAGCAGAAGTTATAAGGATGCCAAATGTGA-CATCAACTCTCCTTGAGGAA 1111
Query 1066 ATCACAGAGAGTAGGTTTAAGGGTTTGAGGGGTGATTTCCAATTGCATGATAAGAAGTTG 1125
|||||| ||| ||||||||| |||||||| |||||||||||| | ||||||||||||||
Sbjct 1112 ATCACAAAGACTAGGTTTAACGGTTTGAGTGGTGATTTCCAACTAAATGATAAGAAGTTG 1171
Query 1126 TTATCAAACAAGTTTGAGATTGTGAATATGATAGGATCAGGTGAGAGAAGGGTAGGATT- 1184
||||||||||||||||||||| | ||||||||||||||| |||||||||| ||||||||
Sbjct 1172 TTATCAAACAAGTTTGAGATTATCAATATGATAGGATCAAGTGAGAGAAGAGTAGGATTC 1231
Query 1185 TTGGAATTCTAATGGTAGTTTCAGCAATAGAAGACAGTTATCTTCTACTCATGACAAGCT 1244
|| ||| ||||| |||||||| || ||||||||||| ||||||||||||||| |||||||
Sbjct 1232 TT-GAACTCTAACGGTAGTTTTAGTAATAGAAGACATTTATCTTCTACTCATAACAAGCT 1290
Query 1245 GGAGACCATAATTTGGCCTGGTGGGTCTGCTAAAAGTCCGAAAGGGAGTAGCCTAAGAGA 1304
||||||||||| ||||| |||||||||||| ||||||||||||||| ||| |||| |||
Sbjct 1291 TGAGACCATAATCTGGCCAGGTGGGTCTGCTCAAAGTCCGAAAGGGACTAGTCTAATAGA 1350
Query 1305 GAGCGGTAGACAAAAGCTGAGGGTTCTT-GTTACATCTAGCAATAGATTCCCAAGACTGA 1363
|||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 1351 TAGCGATAGAAAAAAGCTGAGGG-TCTTGGTTACATCTAGCAATAGATTCCCAAGACTGA 1409
Query 1364 TGAAGGTAGAGACTGATTCAGTAACAAATGATATAACAAATGTCGAAGGGTTTTGTATAG 1423
|||| || ||||||||| ||||||||||||| || || ||| |||||||| |||||||
Sbjct 1410 TGAAAGTGGAGACTGATCCAGTAACAAATGA-AT--TAATTGTTGAAGGGTTCTGTATAG 1466
Query 1424 AAGTCTTTCAG-GCTTCCATT-GCACCTTTTAATTATGAAGTGGAGTACATACGTTGGCG 1481
||||||||| | ||||| ||| | ||||| || |||||||| ||||| |||| |||||
Sbjct 1467 AAGTCTTTC-GCGCTTCGATTAG-TCCTTTCAACTATGAAGTTGAGTATATACCTTGGCT 1524
Query 1482 CAATGGAAGTAACTACGACAATCTTGCATATGCACTTCATAGCCAGAAAGACAAATATGA 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525 CAATGGAAGTAACTACGACAATCTTGCATATGCACTTCATAGCCAGAAAGACAAATATGA 1584
Query 1542 TGTGGCCGTGGGAGATATTACAATCACTTCTAATAGATCGACCTATGTTGATTTTACGTT 1601
|| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 1585 TGCGGCCGTGGGAGATATTACAATCACTTCGAATAGATCGACGTATGTTGACTTTACGTT 1644
Query 1602 GCCATTCACCGAAATGGGTCTTGGGATTGTAGCAGCAACGGAGAGAAGTATGTGGGTGTT 1661
||||||||| |||||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct 1645 GCCATTCACTGAAATGGGTCTTGGAATTGTAGCAGTAAAAGAGAGAAGTATGTGGGTGTT 1704
Query 1662 CTTTCAACCTCTAACACCAGATCTTTGGCTAACAAGTGCAGCTTTCTTTGTCTTGACGGG 1721
||| |||||| ||||||||||||||||| ||||||||||| ||| ||||||||||| ||
Sbjct 1705 CTTCCAACCTTTAACACCAGATCTTTGGATAACAAGTGCATTTTTTTTTGTCTTGACCGG 1764
Query 1722 TA-TTATAGTTTGGTTGATAGAAAGA-CATGAGAACACTGAGTTCCAGGGATCTTGGTCA 1779
| ||||||||||||||||||||||| | |||||||| |||||||| ||||||||| ||
Sbjct 1765 -AGTTATAGTTTGGTTGATAGAAAGAGC-TGAGAACAAAGAGTTCCAAGGATCTTGGCCA 1822
Query 1780 CAGCAAATTGGAGTTGTGCTTTGGTTTGGCTTCTCTACCCTTGTTTATGCTCATAGGGAG 1839
|| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1823 CAACAGATTGGAGTTGTGCTTTGGTTTGGCTTCTCTACCCTTGTCTATGCTCATAGGGAA 1882
Query 1840 AGGCTAAAACACAACTTATCAAGATTTGTAGTTACAGTTTGGGTATTTGCAGTGCTCATA 1899
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1883 AAGCTAAAACACAACTTATCAAGATTTGTTGTTACAGTTTGGGTATTTGCAGTGCTCATA 1942
Query 1900 TTGGTTACAAGTTACACTGCAACATTGACATCAATGATGACAGTGCAACAAATACGATTC 1959
|| | |||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 1943 CTGACTGCAAGTTACACTGCAACATTGACATCAATGATGACGGTACAACAGATACGATTT 2002
Query 1960 AACACTAATGAAGACTACGTGGGTTACCTCTCGGGCTCCCTCATCACAAACACGGCCCTC 2019
||| | || ||||||||||||||| |||| || ||||||||||| |||| ||| |||
Sbjct 2003 AACTCCAACGAAGACTACGTGGGTCACCTTTCCGGCTCCCTCATTGCAAATGTGGCTCTC 2062
Query 2020 ACCAATTCCAGCCTCCGAGCAATGAGATTATTGGGTCTCAATACTTCAGAAGATTATGCT 2079
|| | ||||||||||||||||||||||| ||||||||| |||| | | | ||||||||||
Sbjct 2063 ACTAGTTCCAGCCTCCGAGCAATGAGATCATTGGGTCTTAATAGTGCTGCAGATTATGCT 2122
Query 2080 CAAGCATTGTTGAACAAAAGTGTCTCATATATTGTC-AGTGAGTTGCCATACCTCAAGGT 2138
||||| ||||||||||| | ||| |||| | |||| | |||||||||||||||||| ||
Sbjct 2123 CAAGCCTTGTTGAACAAGACTGTTTCATTTGTTGTTGA-TGAGTTGCCATACCTCAAAGT 2181
Query 2139 CCTCCTTGGCGAGTATCCTTCACATTTTCTCATGGTCAAGACACAATCTACCACCAATGG 2198
||||||||||| |||| |||||||| |||||||||||||||||||||||||||| ||
Sbjct 2182 TGTCCTTGGCGAGAATCCAACACATTTTTTCATGGTCAAGACACAATCTACCACCAACGG 2241
Query 2199 TTTTGGCTTTATGTTCCAGAAGGGATCCGAGTTGGTGCCTAATGTGTCCCGAGAGAT-TG 2257
||| ||||||||||| || ||||| | ||||||||||||||||||||||||||| || |
Sbjct 2242 TTTCGGCTTTATGTTTCAAAAGGGCTTCGAGTTGGTGCCTAATGTGTCCCGAGAAATCT- 2300
Query 2258 CGAAGCTAAGGACGAGCGAGCGGCTAAATGAGATGGAGAAAAGGTGGTTTGATAAACAAC 2317
| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||
Sbjct 2301 CAAAGCTAAGGACGAGCGAGAAGCTAAATGAGATGGAGAAAAGATGGTTTGATAATCAAC 2360
Query 2318 TCCCATACACAACTGATGATACATCAAATCCTATAACCCTTTATAGATTCCGCGGTTTGT 2377
| ||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 2361 TTCCATACACAACCGATGATACATCAAATCCTATTACTCTTTACAGATTCCGCGGTTTGT 2420
Query 2378 TTATGATCACCGGAGTTTCATTCGCTTTCGCTCTTGCGGTACTTCTCATTCTTTGGCTCC 2437
|||| |||| ||| |||||||||||||||||||||||||||||| ||||||| || ||||
Sbjct 2421 TTATAATCATCGGTGTTTCATTCGCTTTCGCTCTTGCGGTACTTGTCATTCTCTGTCTCC 2480
Query 2438 GAGAAAAATGGAAAATTCTTGTGAATTCGGTCAATATATACCTCTCACAACGACTTAGAC 2497
| || |||||| ||||||||||| | | ||| || |||||||||||||||||||||
Sbjct 2481 GCGACAAATGGGAAATTCTTGTGGA--C----AATCTAGACCTCTCACAACGACTTAGAC 2534
Query 2498 ATTTCATGATCCTCTTCGCAAGAACTATTCATCCTATTCCCCTCGATAACCCTATTGGCC 2557
|||||| ||||| ||| | |||| |||| ||| ||| |||||| ||| |||| ||||||
Sbjct 2535 ATTTCAGGATCCACTTTGTAAGATCTATACATACTAGTCCCCTTGATGACCCCATTGGCG 2594
Query 2558 AGAA-TGTGGTTCAAATGGCTCATCGTAACAGACGATAG 2595
| || || ||||||||||||||| | || |||| ||||
Sbjct 2595 A-AACTGCGGTTCAAATGGCTCAACAAAATAGACAATAG 2632
> AT3G07520.1 | Symbols: ATGLR1.4, GLR1.4 | glutamate receptor
1.4 | chr3:2394891-2398291 REVERSE LENGTH=2816
Length=2816
Score = 536 bits (290), Expect = 4e-151
Identities = 1401/1914 (73%), Gaps = 170/1914 (9%)
Strand=Plus/Plus
Query 136 GGTTTGATTTTGGATTTGGGTTCCGTGGAAGGAAAGATAGTGAGAAGC-TCTG-TTTCCA 193
|||||| | |||| |||||||| ||||||| ||| | |||| || | || | |||| |
Sbjct 145 GGTTTGGTGGTGGACATGGGTTCCATGGAAGGCAAGCTTGTGACAA-CTTC-GATTTCGA 202
Query 194 TGGCGCTTTCCGATTTCTACGTCAT-T-AACAGTCATTACAAAACAAGAGTCTCT-TTTT 250
|||||||||| |||||||| |||| | |||| | || | ||||||||||||| | ||
Sbjct 203 TGGCGCTTTCTGATTTCTA--TCATGTCAACAATGGCTATAGAACAAGAGTCTCTGTCTT 260
Query 251 CAGT-TAAAAACTCTCATGGAGAGCCTCTTCTTGCTCTCGGTTCTGCTATAGATTTGCTG 309
| | | | |||||||||| || ||||| | ||||||| | | || || || | |||
Sbjct 261 -A-TCCAGAGACTCTCATGGTGACCCTCTCCAAGCTCTCGCTGCAGCCATGGACCTCCTG 318
Query 310 CAAACTGAAGGAGTAGAAGCAATTATTGGCGGGA-ATTCGTTGCTGGAAACGAAGCTTTT 368
||||||||| ||| |||||| || |||| ||| | |||||||| ||| | || |||
Sbjct 319 CAAACTGAACAAGTGGAAGCACTTGTTGG-TGGACAATCGTTGCTTGAAGCAAAAAATTT 377
Query 369 GGCGGAACTTGGCGAGAAAGCTAGGGTTCCTGTGATTTCACTAAACTCTCCGA-TTTC-A 426
|| || ||||| |||||| ||| ||||| ||||||| || || ||| | || | |
Sbjct 378 AGCAGAGCTTGGGGAGAAAACTAAAGTTCCAGTGATTT--CT--TCTTTCCAAGTTCCTA 433
Query 427 --T-GTTCA--TTGAG-CAGATACAGTTACTTGATCCAAGCCACGCATGATTC-TGCCTC 479
| ||| | ||| | || ||| | |||||| || ||||| || |||||| | | ||||
Sbjct 434 GCTCGTTGAGCTTG-GCCAAATATAATTACTTTATTCAAGCTACTCATGATACAT-CCTC 491
Query 480 TGAGGCTAAGGGAATTACAGCTTTGATCAATGGGTTTGATTGGA-ACAGTGTTGCTCTTG 538
||| || ||||||||| ||||| || ||| |||||||||| | | | || ||||
Sbjct 492 TGAAGCAAAGGGAATTGCAGCTCTGTTCAGCAATTTTGATTGGAGA-ACCGCTGTTCTTA 550
Query 539 TATATGAAGATCATGATGATTGGAGAGAGACTAT-GTATTTTATGG-TGGAGCATTTACA 596
| || || ||| ||||||| |||||||||| ||| | || ||| |||| ||||| ||
Sbjct 551 TCTACGAGGATGATGATGACTGGAGAGAGAGTATACAACCTT-TGGTTGGA-CATTTCCA 608
Query 597 TGAGAACAACGTTCGTGTACAGTCCAAGATTGG--TTTTACTGTCTCTTC-AAGTGAAGA 653
||||| | ||| | ||| |||| || |||| ||||||| || || ||| ||
Sbjct 609 ACAGAACGCCATTCACATTGAGTACAAG-GCGGAATTTT-CTGTCTCATCTAA-TGAGGA 665
Query 654 TTTTGTGACGGATCGGTTACAG-AAGCTGAAGGAATTGGGAACAACTG-TCTTTGTTGTT 711
| | | | | | | | || || ||| | |||| | ||| | || | | |||||||
Sbjct 666 ATGTATCATGAAGCAGCTA-AGAAAGTTTAAGGCCTCGGGGATAA-GGATTTTTGTTGCG 723
Query 712 CAC-TTGTCTGAA-GTTATTGCAACTCATCTCTTCCCATGTGCT-GAGAAATTAGGGTTG 768
||| || |||||| | ||||||| || |||||| ||||||||| | || ||||| ||
Sbjct 724 CACATT-TCTGAACG-AATTGCAAATCGTCTCTTTCCATGTGCTCG-GAGGTTAGGAATG 780
Query 769 ATGG-GTGAAGGGTTTGCTTGGATTCTCACTGCCAAAAGCATGGGCACTTTTCATGAATC 827
|||| | ||||| | ||||||||| ||||| || | ||||||| | |||||| | |
Sbjct 781 ATGGAG-GAAGGATATGCTTGGATCCTCACAGCGAGAAGCATGAATAATTTTCAAG-A-- 836
Query 828 CATTGATGATTTCGCAAAGGAGGCAATGGAAGGTGTGGTTGGTTTCAAGTCTTATGTAAC 887
|| || |||| ||||| |||| ||||||||||||| ||||||||||||||||| | |
Sbjct 837 CACAAATTATTTAGCAAAAGAGGAAATGGAAGGTGTGATTGGTTTCAAGTCTTATATTCC 896
Query 888 AATGTCTAAAGAACTTCA-AAATTTCACTTTGAGATGG-AGAAGATCACTGCCAGTTGAA 945
|| || | || ||||| || ||| |||||||||||| || ||||| ||| | | |||
Sbjct 897 GTTGACTGAGGAGCTTCACAACTTT-ACTTTGAGATGGAAG-AGATCTTTGCGACTCGAA 954
Query 946 GAAACGGAGATAAC-TCGATTGAGTATCTCTGGTGTATGGGCTCATGATATCGCTTGGGG 1004
| || | || | || || |||| | | | | |||||||||| ||||| |||||| |
Sbjct 955 G-AA-GTAG-TTACAAGGA-TGAGCGTTTGTAGCATATGGGCTCACGATATAGCTTGGAG 1010
Query 1005 TCTGGCGAGGGCAGCTGAAGTTATAAGGATGCCAAATGTATCA-TCA-A--ATTTCCTTG 1060
||| || || ||||| |||||| || | | ||| | | ||| | | | | | ||||
Sbjct 1011 TCTTGCAAGAGCAGCAGAAGTTGCAAAGTTACCAGGTTTGTCAGT-ATATGACCTGCTTG 1069
Query 1061 AGGC-AAT-CACAGAGAG-TAGGTTTAAGGGTTTGAGGGGTGATTTCCAATTGCAT-GAT 1116
|||| | | || |||| | || | ||| |||||||| ||||| || |||| ||| |||
Sbjct 1070 AGGCTATTCCAGAGAGTGCTAAGCATAAAGGTTTGAGTGGTGACATCAAATT-CATCGAT 1128
Query 1117 AAGAAGTTGT-TATCAAACAAGTTTGAGATTGTGAATATGATAGG-ATCAGGTGAGAGAA 1174
|||||||| | | ||| |||||||||||||||||||||||||||| | |||||||||||
Sbjct 1129 AAGAAGTT-TATCTCAGACAAGTTTGAGATTGTGAATATGATAGGGAG-AGGTGAGAGAA 1186
Query 1175 GGGTAGGATTTTGGAATTCTAATGGTAGTTTCA---GCAATAGAAGAC-A-GTTA-TCTT 1228
| |||||| ||||||||||| |||||||||| ||||||||||| | ||| ||||
Sbjct 1187 GTGTAGGACTTTGGAATTCT---GGTAGTTTCATCAGCAATAGAAGAAGACGTTTGTCTT 1243
Query 1229 CTACTCAT-GACAAGCTGGAGACCATAATTTGGCCTGGTGGGTCTGCTAA-AAGTCCGAA 1286
|||| || | || || ||||| || || |||||||| |||||| | || || ||||||
Sbjct 1244 CTAC-CAAAG-CA--CTTGAGACAATCATCTGGCCTGGAGGGTCTAC-AAGAATTCCGAA 1298
Query 1287 AGGGAGTAGCCT--AA-GAGA-GAG-C--GGTAGACA-AA-A-GCTGAGGGTTCTT-GTT 1335
| || | | || |||| ||| | |||| | | || | |||||| ||| || ||
Sbjct 1299 AATCCGTT-CGTTGAAAGAGAAGAGGCATGGTAAAAAGAAGAAGCTGAGAGTT-TTAGT- 1355
Query 1336 AC-ATCTAGCAATAGAT---TCC-CAAG-ACTGATGAAGGTAGAGA-CTGATTCAGTAAC 1388
|| | | || || | || ||| ||| |||| |||| | || | | |||| |||
Sbjct 1356 ACCAGC-AGGAA-ACATAACTCCGCAAATACTG--GAAG-T-GAAAACAGATTT--TAA- 1406
Query 1389 AAATG-ATATAACAAATGTCGA-AGGGTTTTGTATAGAAGTCTTTCAGGCTTCCATTGC- 1445
|| || | | ||| || | | ||| | ||||| || || ||| || | || || |
Sbjct 1407 AACTGGAG-TCACAGCTG-CTACAGGATACTGTATTGACGTTTTTGAGACATCAATC-CT 1463
Query 1446 ACCTTTTAATTATGAAGTGGAGTACATACGTTGGCGCAA-TGGAAGTAACTAC--GA-C- 1500
|||||| |||||||||||||||||||||| ||||| | || || ||||||| || |
Sbjct 1464 ACCTTTCAATTATGAAGTGGAGTACATACCTTGGC-CTGGTGCAATTAACTACAAGAACT 1522
Query 1501 A-A----TCTTGCATATGCACT-TCATAGCCAGAAAGACAAATATGATGTGGCCGT-GGG 1553
| | ||||| || |||| | |||||||||||||||| || |||| || || |||
Sbjct 1523 ACAACGATCTTGTGTACACACTGT-ATAGCCAGAAAGACAAGTACGATGCAGCTGTTGGG 1581
Query 1554 AGATATTACAATCACTTCTAATAGATCGACCTATGTTGATTTTACGTTGCCATTCACCGA 1613
||||| || || ||| ||| ||||| ||||| |||||||| || || ||||| ||
Sbjct 1582 -GATATCACGATTACTGATAACAGATCTTTATATGTAGATTTTACATTACCTTTCACTGA 1640
Query 1614 AATGGGTCTTGG-GATTGT-AGCAGC-AACGGAGAGAAGTATGTGGGTGT-TCTTTCAA- 1668
||||| || | | |||| | | || || | | | ||| |||||| | | ||||| ||
Sbjct 1641 TATGGGACTCGCAG-TTGTTA-CTGCCAAAG-ACAAAAGCATGTGGAT-TATCTTT-AAG 1695
Query 1669 CCTCTAACACC-AGATCTTTGGCTAACAAGTGCA-GCTTTCTTTGTCTTGACGGGTATTA 1726
||| | |||| || |||||||||||||| |||| | ||||||| |||||||||| ||
Sbjct 1696 CCTTTGACACTTAG-TCTTTGGCTAACAATTGCAAG-TTTCTTTATCTTGACGGGGGCTA 1753
Query 1727 TAGTTTGGTTGATAGAAAGACATGAGAACACTGAGTTCCAGGGATCTTGGT-CACAGCAA 1785
|||||||||||||||| | ||||| ||| |||| ||||| || ||||| | | || ||
Sbjct 1754 TAGTTTGGTTGATAGAGCGGCATGATAACGCTGACTTCCAAGGCTCTTGTTTC-CAACAG 1812
Query 1786 ATTGGAGT-TGTGCTTTGGTTTGGCTTCTCTACCCTTGT-TTATGCTCATAGGGAGAGGC 1843
|||||| | |||| || ||||| ||||| |||||||| || ||| ||| |||||||||
Sbjct 1813 ATTGGAACAT-TGCTATGTTTTGGGTTCTCGACCCTTGTCTT-TGCCCATCGGGAGAGGC 1870
Query 1844 TAAAACACAACT-TATCAAGATTTGTAGTTACAGTTTGGGTATTTGCAGTGCTCATATTG 1902
| |||| || | | |||||||||||||||| |||||| ||||||||||||| ||||||
Sbjct 1871 TGCAACATAA-TATGTCAAGATTTGTAGTTATTGTTTGGATATTTGCAGTGCTTATATTG 1929
Query 1903 G-TTACAAGTTACACTGCAACATTGACATCAATGATGACAGTGCAACAAATACG 1955
|| ||| |||||||||||| ||||||||| ||||||| || ||||| |||||
Sbjct 1930 ACTT-CAAATTACACTGCAACGTTGACATCAGTGATGACGGTTCAACAGATACG 1982
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 128828709624
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5