BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484593
Length=1144
Score E
Sequences producing significant alignments: (Bits) Value
AT3G28070.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1543 0.0
AT3G28080.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1441 0.0
AT3G28100.1 | Symbols: | nodulin MtN21 /EamA-like transporter ... 1345 0.0
> AT3G28070.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr3:10447922-10451034 FORWARD LENGTH=1314
Length=1314
Score = 1543 bits (835), Expect = 0.0
Identities = 1002/1083 (93%), Gaps = 9/1083 (1%)
Strand=Plus/Plus
Query 21 TAATGGCCGGAGCCGTAAGTCTTTGGCGGAGAGAGGCCGTGTTCTTGACGGCAATGCTAG 80
||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 50 TAATGGCCGGAACCGCAAGTCCTTGGCGGAGAGAGGCCGTGTTCTTGACGGCAATGCTGG 109
Query 81 CGGTCGAAACCAGCGTCGTCGGAATAAGTACTTTGTTTAAAGTAGCAACTTCAAAGGGAC 140
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 110 TGGTCGAAACCAGCGTCGTCGGAATAAGTACTTTGTTTAAATTTGCAACTTCAAAGGGAC 169
Query 141 TCAACATTTATCCTTTCCTCGGCTATTCCTAtcttctagcttctcttcttcttcttcctt 200
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 170 TCAACATTTATCCTTTCCTCGGCTATTCTTATCTTCTTGCTTCTCTTCTTCTTCTTCCTT 229
Query 201 ctcttttcttcACCT-ACAGTTCAAGATCACTTCCTCCACTAAATATCTCAATACTCTGT 259
|||||||||||| || |||| ||||| |||||||||||||||| | |||||||||| |
Sbjct 230 CTCTTTTCTTCA-CTAACAGGTCAAGTTCACTTCCTCCACTAAGTGTCTCAATACTTTCA 288
Query 260 AAGATCGGACTTCTTGGATTTCTAGGATCAATGTATGTAATCACAGGATACATAGGCATC 319
|| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 289 AAAATTGGACTTCTTGGATTTCTAGGATCAATGTATGTGATCACAGGATACATAGGCATC 348
Query 320 GAATACAGCAGCCCAACATTAGCCTCCGCCATAAACAATATCACTCCTGCTCTTACCTTC 379
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 349 GAATACAGCAGCCCAACCTTAGCCTCCGCCATAAACAATATCACTCCTGCTCTTACCTTC 408
Query 380 ATCCTCGCCGTTATCTTCAGAATGGAAAAAGTATCATTCAAAGAAAGGAGCAGTGTAGCC 439
||||||||| ||||||||||||||||||||||||| |||||||| ||||| ||| |||||
Sbjct 409 ATCCTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAGAGGAGTAGTCTAGCC 468
Query 440 AAAGTGATGGGGACGCTACTGTCATTAATAGGTGCACTTGTGGTGATTTTCTACCGCGGT 499
||| ||||||||||| || ||||| | |||||||||||||||||||||||||||| ||||
Sbjct 469 AAATTGATGGGGACGATATTGTCACTGATAGGTGCACTTGTGGTGATTTTCTACCACGGT 528
Query 500 CCACGTGTCT-CCGTAGCATCTTCTCCGCCGTATCTAAACTTCCGACAGCATTCCCCACC 558
|||||||||| || | |||||||||||||| ||| |||||||||| ||| ||| |||||
Sbjct 529 CCACGTGTCTTCC-TCGCATCTTCTCCGCCCTATGTAAACTTCCGTCAGTTTTCTCCACC 587
Query 559 GTTGTCATCTTCAAACTCCGACTGGCTCATCGGAGGAGCTCTTCTAACCATACAAGGCAT 618
||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct 588 GTTGTCATCTTCAAACTCCGATTGGCTCATCGGTGGAGCTCTTCTAACCATGCAAGGCAT 647
Query 619 CTTCGTTTCTGTCTCTTTCATTCTCCAGGCACATATAATGAGTG-AGTATCCAGCAGCAT 677
||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||
Sbjct 648 ATTCGTTTCTGTTTCTTTCATTCTTCAGGCACATATAATGAGTGTA-TATCCAGCAGCAT 706
Query 678 TTAGAGTCTCCTTTCTTTACACTGTATGTGTTTCAATCGTGACCTCAACGATTGGACTAG 737
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 707 TCAGAGTCTCCTTTCTTTACACTGTATGTGTTTCAATCGTGACCTCGACGATTGGACTAG 766
Query 738 TAGCCGAAAAGAACAATCCAAGCGTTTGGATCATTCATTTTGATATTACTTTGATTACGA 797
||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 767 TAGTTGAAAAGAACAACCCAAGCGTTTGGATCATTCATTTCGATATTACTTTGATTACAA 826
Query 798 TTGTTACTATGGCAATAATAACTTCAGTATACTATGTGATTCATTCATGGACAGTACGAC 857
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 TTGTTACCATGGCAATAGTAACTTCAGTATACTATGTGATTCATTCATGGACAGTACGAC 886
Query 858 ACAAAGGACCTCTATACTTAGCGATATTTAAGCCTTTGTCGATTTTAATAGCAGTGGTTA 917
| ||||||||||| |||||||| |||||||| |||||||| |||||||||||||||||||
Sbjct 887 ATAAAGGACCTCTGTACTTAGCCATATTTAAACCTTTGTCCATTTTAATAGCAGTGGTTA 946
Query 918 TGGGGGGCATTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATCGGAGGAATTTTGA 977
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TGGGGGCCATTTTTCTCAATGATTCTCTCTATCTCGGATGTTTGATCGGAGGAATTTTGA 1006
Query 978 TATCATTAGGCTTCTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGACCAGTTGT 1037
|| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1007 TAACATTAGGCTTTTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGATCAGTT-- 1064
Query 1038 TATCATTTTCCGGAAAAGAGAAAACCCCTCTTCTATTGAGTGGCAAGAACGACCAAATTT 1097
||||||||| | |||||||||||| ||||||||||| | |||| ||||||||| |||
Sbjct 1065 -ATCATTTTCAGAAAAAGAGAAAACGCCTCTTCTATTAAACCGCAAAAACGACCAAGTTT 1123
Query 1098 AAA 1100
|||
Sbjct 1124 AAA 1126
> AT3G28080.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr3:10451518-10455267 FORWARD LENGTH=1322
Length=1322
Score = 1441 bits (780), Expect = 0.0
Identities = 981/1081 (91%), Gaps = 2/1081 (0%)
Strand=Plus/Plus
Query 22 AATGGCCGGAGCCGTAAGTCTTTGGCGGAGAGAGGCCGTGTTCTTGACGGCAATGCTAGC 81
|||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 49 AATGGCCGGAGCAGTAAGCCTTTGGCGGAGAGAGGCCGTGTTCTTGACGGCGATGCTGGC 108
Query 82 -GGTCGAAACCAGCGTCGTCGGAATAAGTACTTTGTTTAAAGTAGCAACTTCAAAGGGAC 140
|| |||||||||| |||||||| |||||||| ||||||| |||||||||||||||||||
Sbjct 109 AGG-CGAAACCAGCATCGTCGGACTAAGTACTCTGTTTAAGGTAGCAACTTCAAAGGGAC 167
Query 141 TCAACATTTATCCTTTCCTCGGCTATTCCTAtcttctagcttctcttcttcttcttcctt 200
|||||||||| ||||||||| ||||||| |||||||| ||||||||||| ||||||||||
Sbjct 168 TCAACATTTACCCTTTCCTCAGCTATTCTTATCTTCTTGCTTCTCTTCTCCTTCTTCCTT 227
Query 201 ctcttttcttcACCTACAGTTCAAGATCACTTCCTCCACTAAATATCTCAATACTCTGTA 260
|||| ||||||||| |||| |||||||||||||||||||||| | ||||||||||| ||
Sbjct 228 CTCTGTTCTTCACCAACAGGTCAAGATCACTTCCTCCACTAAGTGCCTCAATACTCTCTA 287
Query 261 AGATCGGACTTCTTGGATTTCTAGGATCAATGTATGTAATCACAGGATACATAGGCATCG 320
|||| ||||||||||| |||||||||||||||||||| || |||||| |||||||||||
Sbjct 288 AGATTGGACTTCTTGGCTTTCTAGGATCAATGTATGTTATTACAGGAGGCATAGGCATCG 347
Query 321 AATACAGCAGCCCAACATTAGCCTCCGCCATAAACAATATCACTCCTGCTCTTACCTTCA 380
||||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||
Sbjct 348 AATACAGCAACCCAACCTTAGCCTCCGCCATAGGCAATATTGTTCCTGCTCTTACCTTCA 407
Query 381 TCCTCGCCGTTATCTTCAGAATGGAAAAAGTATCATTCAAAGAAAGGAGCAGTGTAGCCA 440
||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 408 TCCTCGCTGTTATCTTCAGGATGGAGAAAGTATCATTCAAAGAAAGGAGCAGTGTAGCCA 467
Query 441 AAGTGATGGGGACGCTACTGTCATTAATAGGTGCACTTGTGGTGATTTTCTACCGCGGTC 500
|||||||||||||| |||||||| ||||||| ||| |||||||||||||||||| |||||
Sbjct 468 AAGTGATGGGGACGATACTGTCACTAATAGGCGCATTTGTGGTGATTTTCTACCACGGTC 527
Query 501 CACGTGTCTCCGTAGCATCTTCTCCGCCGTATCTAAACTTCCGACAGCATTCCCCACCGT 560
||||||||| || ||||||||||| || |||||||||||||| |||| ||| |||||||
Sbjct 528 CACGTGTCTTTGTCGCATCTTCTCCACCATATCTAAACTTCCGTCAGCTTTCTCCACCGT 587
Query 561 TGTCATCTTCAAACTCCGACTGGCTCATCGGAGGAGCTCTTCTAACCATACAAGGCATCT 620
||||||| ||||| || || |||||||||||||||||| |||| ||||||||||||||||
Sbjct 588 TGTCATCGTCAAAGTCTGATTGGCTCATCGGAGGAGCTATTCTTACCATACAAGGCATCT 647
Query 621 TCGTTTCTGTCTCTTTCATTCTCCAGGCACATATAATGAGTGAGTATCCAGCAGCATTTA 680
|||||||||| ||||| ||||||||| ||||||||||||| || ||||| | |||||| |
Sbjct 648 TCGTTTCTGTTTCTTTTATTCTCCAGACACATATAATGAGAGAATATCCTGAAGCATTCA 707
Query 681 GAGTCTCCTTTCTTTACACTGTATGTGTTTCAATCGTGACCTCAACGATTGGACTAGTAG 740
||||||| |||| |||| | ||||| |||||||||||||||||| ||||||||||||||
Sbjct 708 CAGTCTCCATTCTCTACATTCTATGTATTTCAATCGTGACCTCAATGATTGGACTAGTAG 767
Query 741 CCGAAAAGAACAATCCAAGCGTTTGGATCATTCATTTTGATATTACTTTGATTACGATTG 800
|||||||||||| |||||| |||||||||||||||| |||||||| ||| |||| ||||
Sbjct 768 TCGAAAAGAACAACCCAAGCATTTGGATCATTCATTTCGATATTACATTGTTTACAATTG 827
Query 801 TTACTATGGCAATAATAACTTCAGTATACTATGTGATTCATTCATGGACAGTACGACACA 860
|||||| || ||||||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct 828 TTACTACGGGAATAATAACTTCAGTATACTATGTGATTCATTCATGGGCAATACGTCACA 887
Query 861 AAGGACCTCTATACTTAGCGATATTTAAGCCTTTGTCGATTTTAATAGCAGTGGTTATGG 920
|| ||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct 888 AAAGACCTCTATACTTAGCGATATTTAAGCCTCTGTCTATTTTGATAGCAGTGGTTATGG 947
Query 921 GGGGCATTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATCGGAGGAATTTTGATAT 980
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 948 GGACCATTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATTGGAGGAATTTTGATAA 1007
Query 981 CATTAGGCTTCTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGACCAGTTGTTAT 1040
|||||||||| || | ||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1008 CATTAGGCTTTTATGTTGTGATGTGGGGCAAAGCAAACGAAGAGAAGAACAAGTTGTTAT 1067
Query 1041 CATTTTCCGGAAAAGAGAAAACCCCTCTTCTATTGAGTGGCAAGAACGACCAAATTTAAA 1100
||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1068 CATTTTCAGGAAAAGAGAAAACCCCTCTTCTATTGAGCGGCAAAAACGACCAAATTTAAA 1127
Query 1101 T 1101
|
Sbjct 1128 T 1128
> AT3G28100.1 | Symbols: | nodulin MtN21 /EamA-like transporter
family protein | chr3:10456099-10460965 FORWARD LENGTH=1266
Length=1266
Score = 1345 bits (728), Expect = 0.0
Identities = 970/1086 (89%), Gaps = 20/1086 (2%)
Strand=Plus/Plus
Query 21 TAATGG-CCGGAGCCGTAAGTCTTTGGCGGAGAGAGGCCGTGTTCTTGACGGCAATGCTA 79
|||||| ||||| | |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 51 TAATGGCCCGGA-CAGTAAGTCTCTGGCGGAGAGAGGCCGTGTTCTTGACGGCCATGCTG 109
Query 80 GCGGTC-GAAACCAGCGTCGTCGGAATAAGTACTTTGTTTAAAGTAGCAACTTCAAAGGG 138
|| | | |||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 110 GC-GACAGAAACCGGCGTAGTCGGAATAAGTACTTTGTTTAAAGTAGCAACTTCAAAGGG 168
Query 139 ACTCAA-CATTTATC-CTTTCCTCGGCTATTCCTAtcttctagcttctcttcttcttctt 196
|||||| | |||| | |||||||||||||||| |||||||| |||||||| |||||||||
Sbjct 169 ACTCAATC-TTTA-CGCTTTCCTCGGCTATTCTTATCTTCTTGCTTCTCTCCTTCTTCTT 226
Query 197 ccttctcttttcttcACCTACAGTTCAAGATCACTTCCTCCACTAAATATCTCAATACTC 256
|||||||| ||||||||| |||| |||||||||||||||||||||| | | ||||||||
Sbjct 227 CCTTCTCTGTTCTTCACCGACAGGTCAAGATCACTTCCTCCACTAAGTTTGTCAATACTT 286
Query 257 TGTAAGATCGGACTTCTTGGATTTCTAGGATCAATGTATGTAATCACAGGATACATAGGC 316
| ||| || |||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 287 TCTAAAATAGGACTTCTTGGATTGCTAGGATCAATGTATGTGATCACAGGATACATAGGC 346
Query 317 ATCGAATACAGCAGCCCAACATTAGCCTCCGCCATAAACAATATCACTCCTGCTCTTACC 376
|||||||||||||||||||| |||||||| ||||| | ||||||||||||||||||||||
Sbjct 347 ATCGAATACAGCAGCCCAACCTTAGCCTCTGCCATTAGCAATATCACTCCTGCTCTTACC 406
Query 377 TTCATCCTCGCCGTTATCTTCAGAATGGAAAAAGTATCATTCAAAGAAAGGAGCAGTGTA 436
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 407 TTCATCCTCGCCATTATCTTCAGAATGGAAAAAGTATCTTTCAAAGAAAGGAGCAGTGTA 466
Query 437 GCCAAAGTGATGGGGACGCTACTGTCATTAATAGGTGCACTTGTGGTGATTTTCTACCGC 496
|||||||||||||||||| || |||| |||||||| |||||||| ||| || ||||||
Sbjct 467 GCCAAAGTGATGGGGACGATATTGTCGTTAATAGGCGCACTTGTTGTGGTTCTCTACCAT 526
Query 497 GGTCCACGTGTCTCCGTAGCATCTTCTCCGCCGTATCTAAACTTCCGACAGCATTCCCCA 556
||||||||||||| || |||||||||||||||||| |||||||||| |||| ||| ||
Sbjct 527 GGTCCACGTGTCTTTGTTGCATCTTCTCCGCCGTATATAAACTTCCGTCAGCTTTCTCCG 586
Query 557 CCGTTGTCATCTTCAAACTCCGACTGGCTCATCGGAGGAGCTCTTCTAACCATACA-AGG 615
||||| ||||||||||| || || ||||||||||| ||||||||||| |||||| | ||
Sbjct 587 CCGTTATCATCTTCAAATTCAGATTGGCTCATCGGCGGAGCTCTTCTTACCATA-AGAGA 645
Query 616 CATCTTCGTTTCTGTCTCTTTCATTCTCCAGGCACATATAATGAGTGA-GTATCCAGCAG 674
|||||| |||||||| |||||||||||||||||| | ||||||||| | ||||||||||
Sbjct 646 CATCTTTGTTTCTGTTTCTTTCATTCTCCAGGCAAAAATAATGAGT-ACATATCCAGCAG 704
Query 675 CATTTAGAGTCTCCTTTCTTTACACTGTAT-GTGTTTCAATCGTGACCTCAACGATTGGA 733
|||| | ||||||||| || |||| ||||| | |||||||||||||| |||| |||||||
Sbjct 705 CATTCACAGTCTCCTTCCTCTACATTGTATCG-GTTTCAATCGTGACTTCAATGATTGGA 763
Query 734 CTAGTAGCCGAAAAGAACAATCCAAGCGTTTGGATCATTC-ATTTTGATATTACTTTGAT 792
||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 764 CTAGTAGTGGAAAAGAACAATCCAAGCGTTTGGATCATTCGA-TTTGATATTACTTTGAT 822
Query 793 TACGATTGTTACTATGGCAATAATAACTTCAGTATACTATGTGATTCATTCATGGACAGT 852
|| ||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 823 AACAATTGTAACTATGGCAATAATTACTTCAGTATACTATGTGATCCATTCATGGACAGT 882
Query 853 ACGACACAAAGGACCTCTATACTTAGCGATATTTAAGCCTTTGTCGATTTTAATAGCAGT 912
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 883 ACGTCACAAAGGACCTCTATACTTAGCGATATTTAAGCCTTTGTCGATTTTAATAGCGGT 942
Query 913 GGTTATGGGGGGCA-TTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATCGGAGGAA 971
||||||| | | || ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 943 GGTTATGAGCG-CAGTTTTTCTCAACGATTCTCTCTATCTCGGATGTTTGATAGGAGGAC 1001
Query 972 TTTTGATATCATTAGGCTTCTACGCTGTGATGTGGGGCAAAGCAAACGAAGAGAAGGACC 1031
| |||||| | || || || ||||||||||||||||| ||||||||||||||||| || |
Sbjct 1002 TATTGATAACGTTGGGGTTTTACGCTGTGATGTGGGGTAAAGCAAACGAAGAGAAAGATC 1061
Query 1032 AGTTGTTATCATTTTCCGGAAAAGAGAAAACCCCTCTTCTATTGAGTGGC-AAGAACGAC 1090
| ||||| | | |||| |||||||||| ||||||||||||||||| ||| || || | |
Sbjct 1062 AATTGTTGTTAGTTTCAGGAAAAGAGAGAACCCCTCTTCTATTGAACGGCTAA-AATGGC 1120
Query 1091 CAAATT 1096
||||||
Sbjct 1121 CAAATT 1126
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56124209310
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5