BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484607 Length=3331 Score E Sequences producing significant alignments: (Bits) Value AT3G33035.1 | Symbols: | transposable element gene | chr3:1357... 4041 0.0 AT2G12390.1 | Symbols: | transposable element gene | chr2:4997... 3616 0.0 AT4G07760.1 | Symbols: | transposable element gene | chr4:4567... 3378 0.0 AT5G32521.1 | Symbols: | transposable element gene | chr5:1217... 2313 0.0 AT2G11590.1 | Symbols: | transposable element gene | chr2:4635... 1648 0.0 AT2G11550.1 | Symbols: | transposable element gene | chr2:4626... 1208 0.0 AT5G32487.1 | Symbols: | transposable element gene | chr5:1211... 1074 0.0 AT2G14970.1 | Symbols: | transposable element gene | chr2:6457... 1040 0.0 AT5G28526.1 | Symbols: | transposable element gene | chr5:1051... 1033 0.0 AT1G40109.1 | Symbols: | transposable element gene | chr1:1515... 1022 0.0 AT3G32950.1 | Symbols: | transposable element gene | chr3:1349... 1013 0.0 AT4G08060.1 | Symbols: | transposable element gene | chr4:4924... 990 0.0 AT1G36630.1 | Symbols: | transposable element gene | chr1:1384... 531 2e-149 AT1G41930.1 | Symbols: | transposable element gene | chr1:1568... 525 1e-147 AT1G42150.1 | Symbols: | transposable element gene | chr1:1574... 307 4e-82 AT5G28524.1 | Symbols: | transposable element gene | chr5:1050... 231 2e-59 AT5G32825.1 | Symbols: | transposable element gene | chr5:1235... 172 2e-41 AT2G06902.1 | Symbols: | transposable element gene | chr2:2803... 139 2e-31 > AT3G33035.1 | Symbols: | transposable element gene | chr3:13576128-13579562 REVERSE LENGTH=3435 Length=3435 Score = 4041 bits (2188), Expect = 0.0 Identities = 3059/3456 (89%), Gaps = 154/3456 (4%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3435 TCAATAGATGACAAACTTATCCATTGGCCATGCAATAGATGAACCAAGTGAATCTCTCAT 3376 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120 ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct 3375 ATAATCGATTTCATCTGATGCCCTCCAAACTGTTGCATCATCTATTTTCACTATATCCAC 3316 Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180 ||||||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||| Sbjct 3315 CCAAACTCTAGCTACATTAGCTCCCAAGCGAACATTGTGTACCTTTTGGTCTGGGTCGAC 3256 Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240 || |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| Sbjct 3255 TGGATGCACACGTCCTTTAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACA 3196 Query 241 CTTCTGATTGGCCTTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAAC 300 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 3195 CTTCTGATTGGCCTTGATAACTTCAGCTACACCTTTACGCTGCCATGTTACAATATAAAC 3136 Query 301 CAGGTTTAATGCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAATA 360 ||| ||||||| |||||||||||||| ||||||||||| |||| ||||| |||||||||| Sbjct 3135 CAGTTTTAATGTATGTAGAAAAATAATCAGATTCAATACGTAATAACAACAAACAAAATA 3076 Query 361 CCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACT 420 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| Sbjct 3075 CCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGTTGAATTTTCTTGACAAGAGACT 3016 Query 421 TTGAACCTGTAGCTGTGGACTTCTCAGCTAGAG-CTTTTGAAACTGTTGCAACGGATTTT 479 |||||||||||||||||||||||| ||||| | | |||||||||||||||||||||||| Sbjct 3015 TTGAACCTGTAGCTGTGGACTTCTTAGCTA-TGCCCTTTGAAACTGTTGCAACGGATTTT 2957 Query 480 GTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctgcagtttgtgaa 539 |||| ||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct 2956 GTACTTTTTGCTGTAGATATCTCAGGGGATGGCTTATAACCTACTGTTGCAGTTTGTGAA 2897 Query 540 cctgatcctgctgctttccct-ga---tgctgc--t-gctga---tgctg-c-tg-ct-- 584 |||||| |||||||||| ||| || |||||| | |||| ||||| | || || Sbjct 2896 CCTGATGCTGCTGCTTT-CCTGGACGCTGCTGCTTTCTCTGATCCTGCTGACTTGCCTAC 2838 Query 585 t--t-c--c---c-tg----ctgatgctgctgattttcctactgatgctgctgctTCCAA 631 | | | | | || |||||||||| || || ||||| |||||| |||||||||| Sbjct 2837 TGATGCTGCTGACTTGCCTACTGATGCTGCCGACTTGCCTACCGATGCTACTGCTTCCAA 2778 Query 632 TGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGACATGTTGCATCTGT 691 |||||||||||||||||| |||||| | |||||||||||| | || ||||||||||||| Sbjct 2777 TGGTGATTTTCCTCTTGCCGCAGAATTGTGAAGTGGAGATATGTGGCATGTTGCATCTGC 2718 Query 692 ATGGTTTTCAAAGATCACTTTGTGGACAGGCCAT-GCTACATAAGACATTAAACAGTCCT 750 | ||||||||||||| ||||||| |||||||||| | | |||| |||||||||||||| Sbjct 2717 AGGGTTTTCAAAGATAACTTTGTTGACAGGCCATGGAAAGGTAAGTCATTAAACAGTCCT 2658 Query 751 CAAAGTATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCAT 810 ||| ||| |||||||||||||||| |||||||||||| |||||||||||||||| ||||| Sbjct 2657 CAAGGTAAGTCACATCCATCGTTGACCTCCATATAAATGTCTCTGGTTGAAGAATTGCAT 2598 Query 811 CGACAAATATCTTTACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGCGTTGTGTT 870 ||||| ||||||| ||| || || ||||||||| ||||||||||||||| || |||| Sbjct 2597 CGACATATATCTTCACTATTGGAGGTCCGAGAGGATTCCCATTGACTAATGCATTTTGTT 2538 Query 871 CTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATCCAGTAGTT 930 |||||||||||||||||||||||||||||||||| |||| |||||||||||| | || | Sbjct 2537 CTTGTGTCTGCCAACGTCCTTCTGCAACAACAACATCATTTGAAGACAAATCAAAAAGCT 2478 Query 931 TGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTTAAT 990 ||||||||| | ||||||||| ||||||| |||||||||| ||||||||| ||||||| Sbjct 2477 GGCATTTGTT-ATTTGGTCCCTGTCAAAAATATTGAAACCCGGAAATACATTATGTTAAT 2419 Query 991 AGAAGATCATTATTCTATATATGAGTATGAGAATGAATAATAAACTTTACCTGGGCTTCA 1050 |||||||||||| |||||||||||| |||||| ||||||||||||||||||||| || || Sbjct 2418 AGAAGATCATTACTCTATATATGAGAATGAGACTGAATAATAAACTTTACCTGGCCTACA 2359 Query 1051 ATGTCTTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCAATC 1110 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2358 ATGTCTTCTTATTGGAGATCCTCTTCTAGGCTAACACACATAGCAGCAGGCCATGCAATC 2299 Query 1111 ATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAATGCT 1170 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2298 ATATGTTCAACGGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAATGCT 2239 Query 1171 TCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAGTCA 1230 |||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct 2238 TCTGGTTCAATATCAGTGTCAATCAAGACTTTAACATCGGTAGGACCTAAGCGACAGTCA 2179 Query 1231 TTAACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATTA-GA 1289 || |||||||||||| ||||| ||| |||||||||||||||||||| |||| ||| | || Sbjct 2178 TTCACTAATTCACCCAGATCATAAGGAATAATACATCCCTCAGCAATTTTTGCAT-ACGA 2120 Query 1290 ACCAGCCCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGTAAAA 1348 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 2119 ACCAGCCCAATCAAGTAAGACACATTTTGGTTGTG-TCCTTTTGTTCACACTCTGTAAAA 2061 Query 1349 -ACAATAGGTAGACAAAATATCAGGTGATTGTATCTGTTAGAATAAATCAAAGCATCTGA 1407 | || || |||||||| ||| | |||| ||||||||||||| |||||||||||| ||| Sbjct 2060 GAAAA-AGATAGACAAAGTATTAAGTGAGTGTATCTGTTAGAGCAAATCAAAGCATATGA 2002 Query 1408 TATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTGTTAC 1467 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 2001 TATGAGTGACTTACTCTTGAAGCTGAGTTTTCACCTACTTCAGGTGATTGTATCTGTTAC 1942 Query 1468 aaaaa-a-aaaGA-AAAG--AA-------GT-C-AA---A--TGT---T----ATATATA 1501 ||||| | ||| | |||| || || | || | ||| | ||||||| Sbjct 1941 AAAAAGAGAAAAACAAAGTCAAATCTTATGTACTAATTGAGCTGTAAGTCTTTATATATA 1882 Query 1502 AATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCATTGA 1561 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1881 AATAGATAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTATTTCTTGTAGCTCATTGA 1822 Query 1562 CCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCACTT 1621 ||||||| || ||| |||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 1821 CCTTCTTTTGTAGACGAAGCTGATTCTCTAGCATTTCAGTCATACACTTGTGCTTCACTT 1762 Query 1622 GGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACC-A--- 1677 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1761 GGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCTACCA 1702 Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737 |||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||| Sbjct 1701 GGATTGTCAGGCCCTAACAGTTACCGTAGTGAATCTTGTGCTTCATTTGTTG-ATG-GAT 1644 Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAA 1797 | |||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct 1643 ---T-ATCATTGTTAACAATCTCTTCTGCCTTTTTCTGAAACTCATAAGATACATTTTAA 1588 Query 1798 AATATCAAGTGTGATTCAAA-TGCCAAAATGCAAATCATT-AGAAGCAAAATAACTCACA 1855 |||||||||||||||||||| ||||||||||||||||| | || |||||||||||||| Sbjct 1587 AATATCAAGTGTGATTCAAAATGCCAAAATGCAAATCAAACAAAA-CAAAATAACTCACA 1529 Query 1856 ATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACC 1915 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1528 ATCTTTTCAGCAGCATTCGTATTCACTTGTGTACCATCTTTCTTAGTACGTGACTTAACC 1469 Query 1916 CAAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC-AAAAAA 1974 ||||||||||| | ||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 1468 CAAACCTTTAGCCTTGTCACTTCAGATGGGTCTGCACTACCAGTTTTCTAAACCAAAAAA 1409 Query 1975 -T-A-C--A-------CA-A-GTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAA 2020 | | | | || | ||||||||||||||| ||||||||||||||||||||||| Sbjct 1408 ATGATCTCAGTTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAA 1349 Query 2021 TATAAGTGT--AGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTA 2077 ||||||||| | ||| | ||||||| ||||| || |||||||||||||||||||||||| Sbjct 1348 TATAAGTGTGTA-CAAGTTTTACCATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTA 1290 Query 2078 CAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 2137 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1289 CAAGTGTGTGAAATCTGATTGCGCCTTCTTTCCTTGTGGCTATCGCTTACAACCTAACAG 1230 Query 2138 ATGAATGTTAATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTT 2197 ||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||| Sbjct 1229 ATGAATGTTAATTTCTATTGTA---TATAGATAAATTTACAAATTCCAAATGCATAGCTT 1173 Query 2198 AAATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTT 2257 |||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1172 AAATTCTTGGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAAAGGAGAAATGTTTTT 1113 Query 2258 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 2317 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1112 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTGGCCT 1053 Query 2318 TGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTC 2377 |||||||||||| |||||||| ||||||||| || |||||| |||||||||||||||||| Sbjct 1052 TGATTTCCAGGAGCTCCACAAACATCCCATCCGCCTAAGCAATGTAACCTTTTGGTACTC 993 Query 2378 TTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACAAAACAGCTAAGTACTCACACCAAT 2437 |||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| | ||| Sbjct 992 TTCATCTAGTTCAAACCTTGTTTGCAATCAAAAACAAAGCAGTTAAGTACTCAC-C-AAT 935 Query 2438 ATATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGTC 2497 || |||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct 934 ATCTAATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACAGTC 875 Query 2498 CTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACC 2557 |||| ||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 874 CTGAGTTCTTCACCAATTTTAGTCCAACGTTCAATTGTGATTGGAACGTGTTCTCTTACT 815 Query 2558 AATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTA 2617 ||||| |||||| ||| ||| || ||||||||||||||| |||||| ||||||||||||| Sbjct 814 AATGCCCCTACAAATGCTGCCAGCTTAACTGAGCCTTTATCAATAGACTCTCCCATGTTA 755 Query 2618 GTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGT 2677 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 754 CTGAACTCTACTCTTACTCTCGCATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGT 695 Query 2678 CCTCGATGTCTCTTACGCTTTGGATCAGCACAATCATAATCCTCAGATAATACAAGCTCT 2737 ||||||||||||||||||||||| ||| || | |||| | |||||||||| ||||||||| Sbjct 694 CCTCGATGTCTCTTACGCTTTGGCTCAACATATTCATGACCCTCAGATAAAACAAGCTCT 635 Query 2738 CCTTCAGCCTCTTCCAC-TTGA--TT-T--GGATCTGC-T-A-CT---TGAACT---TCA 2782 |||| || |||||| | |||| || | |||||| | | | | ||| || || Sbjct 634 CCTTAAGGTTCTTCCTCATTGACCTTATCCGGATCTCCATCAACCACCTGATCTGGATCT 575 Query 2783 GC--CT----CT--T-CCACTTGATCTGGATC-TGC---T-ACTTGAATCTGCTACTTGA 2828 || || || | ||| |||||| | | | | | | ||| ||||| ||||||| Sbjct 574 GCTACTTGATCTGGTTCCAAATGATCTTCACCATTCACCTTATTTGCATCTGATACTTGA 515 Query 2829 ACTTCAGCTGGTGCTACATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATA 2888 |||||||||||| |||||||||| | |||||||||||||||||||||| |||||| ||| Sbjct 514 ACTTCAGCTGGTTCTACATGTTC--C-TCATCATTGACTTGTGGTTCAATTGTACCAATA 458 Query 2889 TACTCGACCTCCTCATTGGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGC 2945 ||||||||||| |||||| ||| |||||| || ||||||||| ||||||||| | |||| Sbjct 457 TACTCGACCTCATCATTGACATTCTTTGCATTGACCTTTTTTT-GTTACTTCTACCTCGC 399 Query 2946 TTTTTCTTCTGTTGTCCCATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAA 3004 ||||||||||||||||||| |||||||||||||||||||||||||| | |||| ||||| Sbjct 398 CTTTTCTTCTGTTGTCCCATCTTAAATCACCTGAGAAAAATGAAAGA-GTAAAGGGTTAA 340 Query 3005 GTATATACTGAA--A-ATAAGACATCAAACACACTATGG-AAATCAGACATCAGACATAG 3060 ||| | | || | ||||||||| |||||||| ||| ||| ||||||| | |||||| Sbjct 339 GTACAC-CGGATGCAGATAAGACATTGAACACACTGTGGGAAA-CAGACATAAAACATAG 282 Query 3061 AGCAGGCAACAAAGAATGAAAATGATa-aaaaaaaa-CTACATTTCACAAACATATATCC 3118 || || |||||| |||||||||||| | |||||||| ||||||||||||||||||||| | Sbjct 281 AGAAGACAACAAGGAATGAAAATGAAACAAAAAAAAACTACATTTCACAAACATATATTC 222 Query 3119 CTTCACAATCAGATC-TCTCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTT 3177 |||||||||||| || ||||||||||||| |||||||||||| |||| ||||||| |||| Sbjct 221 CTTCACAATCAG-TCCTCTCATTCTCAGCGTCATCCAAGTCAGCGTCTATGTCAACATTT 163 Query 3178 GGTGGCAATGTGCCAATGTCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTT 3237 ||||| |||||||||||| |||||| ||||| || |||||||||||||| |||||||||| Sbjct 162 GGTGGGAATGTGCCAATGGCTGCAATTGAATATACAAACTCTTTCTGACAGAATCTTCTT 103 Query 3238 GAAGGA-CCTCTCAATGCAACATACCAAGGTGATGAGTCATCTTCCCTTAGGT-AAAACA 3295 |||| | ||||||||||||||||||||||||| |||||||||||| ||||||| |||| | Sbjct 102 GAAG-ATCCTCTCAATGCAACATACCAAGGTGTTGAGTCATCTTCTCTTAGGTTAAAA-A 45 Query 3296 CTTGTTTTGCTTGAGAGGCTAGTATATACGGATCCC 3331 ||||||||||||||||||||||||| |||||||||| Sbjct 44 CTTGTTTTGCTTGAGAGGCTAGTATGTACGGATCCC 9 > AT2G12390.1 | Symbols: | transposable element gene | chr2:4997453-5001918 FORWARD LENGTH=4466 Length=4466 Score = 3616 bits (1958), Expect = 0.0 Identities = 2567/2844 (90%), Gaps = 110/2844 (4%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 4466 TCAATAGATGACCATCTTATCCATTCGCCATGCAATAGATGAACCAAGTGAATCTCTCAT 4407 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 4406 ATACTCGATTTCATCTGATGCCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 4347 Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 4346 CCAAACTCTAGCTGCATTATTTCCCAAGCGAACATGGTGTACCTTTTGGTCTGGGTCGAC 4287 Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 4286 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACA 4227 Query 241 CTTCTGATTGGCCTTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAAC 300 |||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||| Sbjct 4226 CTTCTGATTGGCCTTGATAACTTCAGCTACACCTTTATGCTGCCATGTTACAATATAAAC 4167 Query 301 CAGGTTTAATGCATGTAGAAAAATAACCAGATTC-A-A--TAGGTAAAAACAATAAACAA 356 ||| ||||||| ||| ||||||||||||| |||| | | ||||||| ||||| | |||| Sbjct 4166 CAGTTTTAATGTATGCAGAAAAATAACCATATTCAATAGCTAGGTAATAACAACATACAA 4107 Query 357 AATACCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAA 416 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 4106 AATACCGGAGATCTACTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAGGA 4047 Query 417 GACTTTGAACCTGTAGCTGTGGACTTCTCAGCTA-GAGCTTTTGAAACTGTTGCAACGGA 475 |||||||||||| ||||| ||||||||||||||| | || |||||||||||||||||||| Sbjct 4046 GACTTTGAACCTTTAGCTATGGACTTCTCAGCTATG-GCCTTTGAAACTGTTGCAACGGA 3988 Query 476 TTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctgcagtttg 535 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3987 TTTTGTACCTTTTGCTGTAGATATCTCAGGGGATGGCTTATAACCTGCTGCTGCAGTTTG 3928 Query 536 tgaacctgatcctgctgctttccctga---tgctgc-tgct--gatgctgctg-ctt--- 585 ||||| |||| ||||||||||||| || | |||| | || ||| |||||| ||| Sbjct 3927 TGAACTTGATGCTGCTGCTTTCCCGGACGCTACTGCTTTCTCGGATCCTGCTGACTTGCC 3868 Query 586 t-c----cctgctga--tg-ctgctgat--t------tt-cctactgatgctgctgctTC 628 | | |||||||| || || ||||| | || |||||| ||| ||||||||| Sbjct 3867 TACTGATCCTGCTGACTTGCCTACTGATGCTGCAAACTTGCCTACTAATGTTGCTGCTTC 3808 Query 629 CAATGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGACATGTTGCATC 688 |||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| Sbjct 3807 CAATGGTGATTTTCCTCTGGCAGCAGAAGTCTAAAGTGGAGATTTCTGCCATGTTGCATC 3748 Query 689 TGTATGGTTTTCAAAGATCACTTTGTGGACAGGCCATGCTACATAAGACATTAAACAGTC 748 || | ||||||||||||| ||||||| || ||||||||| ||| |||||||||||||||| Sbjct 3747 TGAAGGGTTTTCAAAGATAACTTTGTTGATAGGCCATGCAACAAAAGACATTAAACAGTC 3688 Query 749 CTCAAAG-TATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTG 807 ||| ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3687 CTC-AAGATAAGTCACATCCATCGTTGGCCTCCATATAAACGTCTCTGGTTGAAGAACTG 3629 Query 808 CATCGACAAATATCTTTACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-GTTG 866 |||||||||||||||| |||||||| || |||||||||||||||||||||||||| ||| Sbjct 3628 CATCGACAAATATCTTCACTGCTGCAGGTCCGAGAGGAAGCCCATTGACTAATGCATTTG 3569 Query 867 TGTTCTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATCCAGT 926 ||||||| ||||||| |||||||||||||||||||| ||||| |||||||||||||| Sbjct 3568 -GTTCTTGGGTCTGCCCACGTCCTTCTGCAACAACAA-CTCATTTGAAGACAAATCCAAA 3511 Query 927 AGTTTGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGT 986 || | ||||||||| | ||||||||||||||||||||||||||||| |||| |||| ||| Sbjct 3510 AGCTGGCATTTGTT-ATTTGGTCCCTATCAAAAACATTGAAACCCAGAAATTCATTATGT 3452 Query 987 TAATAGAAGATCATTATTC-TATATATGAGTATGAGAATGAATAATAAACTTTACCTGGG 1045 |||||||||||||||| || || ||||||| |||||| ||||||||||||||||||||| Sbjct 3451 TAATAGAAGATCATTACTCTTA-ATATGAGAATGAGACTGAATAATAAACTTTACCTGGC 3393 Query 1046 CTTCAATGTCTTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATG 1105 || || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3392 CTGCATTGTCTTCTTGTTGGAGATCCTCTTCTAGGCTAACACACATAGCAGCAGGCCATG 3333 Query 1106 CAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGA 1165 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 3332 CAATCATATGTCCAACAGCTTTCTCAATGGTGAACATATTAGCCGCAGGTCTCCAAAGGA 3273 Query 1166 ATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGAC 1225 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 3272 ATGCTTCTGGTTCAATAACAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGCGAC 3213 Query 1226 AGTCATTAACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACAT 1285 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3212 AGTCATTCACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTGCAT 3153 Query 1286 TAGAACCAGCCCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGT 1344 ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| Sbjct 3152 AAGAACCAGCCCAATCAAGTAAGAAACATTTTGGTTGTG-TTCTTTTGTTCACACTCTGT 3094 Query 1345 AAAAACAATAGGTAGACAAAATA-TCAGGTGATTGTATCTGTTAGAATAAATCAAAGCAT 1403 |||| || || |||||||| || | || | | |||||||||||||| | ||||||| || Sbjct 3093 AAAAGTAAAAGATAGACAAAGTACTAAGTT-AGTGTATCTGTTAGAACAGATCAAAGTAT 3035 Query 1404 CTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTG 1463 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3034 ATGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGCTGATTGTCTCTG 2975 Query 1464 TTACaaaaaaa-aaGAA-AA-G--AA---GT-----C-AA---A---T---GTT---ATA 1497 ||||||||||| || || || | || || | || | | ||| ||| Sbjct 2974 TTACAAAAAAAGAAAAACAAAGTCAAATCGTATGTACTAATTGAGCCTTAAGTTTGTATA 2915 Query 1498 TATAAATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCA 1557 ||||||||| ||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct 2914 TATAAATAGATAAGTTCACTAACCTGGTTCTTCATTTTTTCAATTACTTCTTGTAGCTCA 2855 Query 1558 TTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTC 1617 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2854 TTGACCTTCTTTTGTAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTC 2795 Query 1618 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCA 1677 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2794 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCAGTCTACCA 2735 Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737 | ||||||||||||||||||||||||||||||||||||||||||||||| | | || Sbjct 2734 GAATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGC--C--G--AT 2681 Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAA 1797 ||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| |||| Sbjct 2680 GGATTATCATTGTTAACAATCTCTTCTGCCTTTTTTTAAAACTCATAAGATACATTTTAA 2621 Query 1798 AATATCAAGTGTGATTCAAA-TGCCAAAATGCAAATCATTA-GAAGCAAAATAACTCACA 1855 |||||||||||||||||||| ||||||||||||||||| | ||| ||||| |||||||| Sbjct 2620 AATATCAAGTGTGATTCAAAATGCCAAAATGCAAATCAA-ACGAAACAAAACAACTCACA 2562 Query 1856 ATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACC 1915 |||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct 2561 ATCTTTTCAGCAGCATTCGTATTCACTGGTATACCATCCTTCTTAGTATGTGACTTAACC 2502 Query 1916 CAAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC-AAAAAA 1974 ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2501 CAAACCTTTAGCCTTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAACCAAAAAA 2442 Query 1975 T-A-C--A-------CA-A-GTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAAT 2021 | | | | || | ||||||||||||||| |||||||||||||||||||||||| Sbjct 2441 TGATCTCAGTTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAAT 2382 Query 2022 ATAAGTGT--AGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTAC 2078 |||||||| | ||| | ||||||| ||||| || ||||||| ||||||||||||||||| Sbjct 2381 ATAAGTGTGTA-CAACTGTTACCATGTCTTCGGCAAGTCTAAGCATTCCCCTGCGACTAC 2323 Query 2079 AAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGA 2138 ||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 2322 TAGTATTTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCACTTACAACCTAACAAA 2263 Query 2139 TGAATGTTAATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTTA 2198 |||||||||||||||| | | |||||||||||||||||||||||||||||||||||| Sbjct 2262 TGAATGTTAATTTCTATTGTA---TATAGATAAATTTACAAATTCCAAATGCATACCTTA 2206 Query 2199 AATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTTA 2258 || |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||||| Sbjct 2205 AACTCTTGGCTAGTTTTGAGCTTCACAAACTTACGCCAATCAAAAGGAGAAATGTTTTTA 2146 Query 2259 GGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTT 2318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2145 GGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTT 2086 Query 2319 GATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTCT 2378 |||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||| Sbjct 2085 GATTTCCAGGACCTCCACAAACATCCTATCTGCCTAAGCACTATAACCTTTTGGTACTCT 2026 Query 2379 TCATCTAGTTCAAACCTTGCCTGC-ACTCAAAAACAAAACAG-CTAAGTACTCACACCAA 2436 |||||||||||||||||||||||| | | ||||||||||||| | |||||||||| | || Sbjct 2025 TCATCTAGTTCAAACCTTGCCTGCCA-TAAAAAACAAAACAGTC-AAGTACTCAC-C-AA 1970 Query 2437 TATATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGT 2496 ||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| Sbjct 1969 TATCTAATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGACTTCCAGAGAACTGT 1910 Query 2497 CCTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTAC 2556 ||||| ||||||||| || || |||||||| |||||||||| || ||||||||||||||| Sbjct 1909 CCTGAGTTCTTCACCAATCTTAGTCCAACGTTCAATTGTGACTGAAACGTGTTCTCTTAC 1850 Query 2557 CAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTT 2616 |||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||||| Sbjct 1849 CAATGCCCCTACATATGATGCCAGCTTAACTGAGTCTTTACCAATAGGCTCTCCCATGTT 1790 Query 2617 AGTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGG 2676 |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 1789 AGTGAACTCTACTCTTACTCTGACATTTGGATCTTTGGCAATATCCTTCAGCCTAGTTGG 1730 Query 2677 TCCTCGATGTCTCTTACGCTTTGGATCAGCACAATCAT-AATCCTCAGATAATACAAGCT 2735 ||||||||||| |||||||||||| ||| ||||||||| || | ||||||| ||||||| Sbjct 1729 TCCTCGATGTCGCTTACGCTTTGGCTCAACACAATCATCAA-CAACAGATAAAACAAGCT 1671 Query 2736 CTCCTTCAGCCTCTTCCAC-TTGA 2758 |||| | || ||||||| | |||| Sbjct 1670 CTCCGTGAGGCTCTTCCTCATTGA 1647 Score = 645 bits (349), Expect = 0.0 Identities = 519/597 (87%), Gaps = 28/597 (5%) Strand=Plus/Minus Query 2752 CACTTGATTTGGATCTGCTACTTGAACTTCAGCCTCTTCCACTTGATCTGGATCTGCTAC 2811 ||| |||| |||||||||||| ||| | || | || |||| ||||||||||||||||| Sbjct 1573 CACCTGATCTGGATCTGCTACCTGATC-TC--CATCAACCACCTGATCTGGATCTGCTAC 1517 Query 2812 TTGA-----ATCTGCTACTTGAACTTCAGCTGG-TGCTACATGTTCGACCTCATCATTGA 2865 |||| ||||| |||||||||||||||||| || | |||||| |||||||||||| Sbjct 1516 TTGATCTGCATCTGATACTTGAACTTCAGCTGGTTG-TGCATGTT---CCTCATCATTGA 1461 Query 2866 CTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCATTGGCATGCTTTGC-TT--CCt 2922 |||||||||||| ||| || |||||||| ||||| |||||||||| |||||| || ||| Sbjct 1460 CTTGTGGTTCAATTGTTCCAATATACTCAACCTCATCATTGGCATTCTTTGCATTGACCT 1401 Query 2923 tttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTCCCATTTTAAATCACCTGAGAA 2982 |||||||||||||| | | |||||||| ||||||||||||||| |||||||||||||||| Sbjct 1400 TTTTTTTGTTACTTTTACCTCGCTTTTGCTTCTGTTGTCCCATCTTAAATCACCTGAGAA 1341 Query 2983 AAATGAAAGAAG-AAAGAGTTAAGTATA-T-ACTGAAAATAAGACATCAAACACACTAT- 3038 ||||||||| || |||| |||||||| | | | || |||||||| || |||||||||| Sbjct 1340 AAATGAAAG-AGTAAAGGGTTAAGTACACTGAATGCAAATAAGAGATTGAACACACTATG 1282 Query 3039 GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAATGAAAATG-A-TaaaaaaaaaC 3096 ||||| ||||||||| |||| || | ||||||| ||||||||||| | |||||||||| Sbjct 1281 GGAAA-CAGACATCAAACATTCAGAATGCAACAAGGAATGAAAATGAAGCAAAAAAAAAC 1223 Query 3097 TACATTTCACAAACATATATCCCTTCACAATCAGAT-CTCTCATTCTCAGCTTCATCCAA 3155 ||||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||| Sbjct 1222 TACATTTCACAAACATAAATTCCTTCACAATCAG-TCCTCTCATTCTCAGCTTCATCCAA 1164 Query 3156 GTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCAAT-GTCTGCAACTGAATCTAGAA 3214 |||| |||| ||||||| ||||||||||||||||||||| | ||||||||||||||| || Sbjct 1163 GTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCAATCG-CTGCAACTGAATCTACAA 1105 Query 3215 ACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAATGCAACATACCAAGGTGATGAGT 3274 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 1104 ACTCTTTCTGACTGAATCTTCTTGAAGAACCTCTCAATGCAACATACCAAGGTGACGAGC 1045 Query 3275 CATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAGGCTAGTATATACGGATCCC 3331 ||||||| ||||||||||| || ||||||||||| ||||||||||| |||||| ||| Sbjct 1044 CATCTTCTCTTAGGTAAAAAACATGTTTTGCTTGCGAGGCTAGTATGTACGGACCCC 988 > AT4G07760.1 | Symbols: | transposable element gene | chr4:4567163-4571912 FORWARD LENGTH=4750 Length=4750 Score = 3378 bits (1829), Expect = 0.0 Identities = 2440/2715 (90%), Gaps = 121/2715 (4%) Strand=Plus/Minus Query 4 ATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATA 63 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 4750 ATAGATGACCAACTTATCCATTGGTCATGCAATAGATGAACCAAGTGAATCTCTCATATA 4691 Query 64 CTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCA 123 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 4690 CTCGATTTCATCTGATGCCCTCCAAACTGTTGCATCATCTATTTTCACTATATCCACCCA 4631 Query 124 AACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGA 183 |||||||||||||||| | |||||||||||||| ||| |||| |||||||||||| ||| Sbjct 4630 AACTCTAGCTGCATTATCTCCCAAGCGAACATGTTGTTTCTTTTGGTCTGGGTCGACTGA 4571 Query 184 ATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTT 243 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct 4570 ATGCACACGTCCTTCAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACACTT 4511 Query 244 CTGATTGGCCTTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAACCAG 303 ||||| | |||||||||||||||||||| |||||||||| |||| ||||||| ||||| Sbjct 4510 ATGATTAGTCTTGATAACTTCAGCTACACCTTTACGCTGCCATGTCACAATAT-AACCAA 4452 Query 304 GTTTAATGCATGTAGAAAAATAACCAGATTC-A-A--TAGGTAAAAACAATAAACAAAAT 359 |||||| |||||||||||||||||||||| | | ||||||| ||||| ||||||||| Sbjct 4451 TTTTAATATATGTAGAAAAATAACCAGATTCAAGAGCTAGGTAATAACAACAAACAAAAT 4392 Query 360 ACCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGAC 419 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 4391 ACCGGAGATCTTCTCAGATGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAGGAGAC 4332 Query 420 TTTGAACCTGTAGCTGTGGACTTCTCAGCTA-GAGCTTTTGAAACTGTTGCAACGGATTT 478 ||||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||||| Sbjct 4331 TTTGAACCTTTAGCTATGGACTTCTCAGCTATG-GCCTTTGAAACTGTTGCAACGGATTT 4273 Query 479 TGTACCTTTTGTTGTAGATATCTCAAG-GGATGGCTTATAAcctgctgctgcagtttgtg 537 ||||||||||| |||| ||||||| || ||||||||||||| | ||||||||||||||| Sbjct 4272 TGTACCTTTTGCTGTAAATATCTC-AGAGGATGGCTTATAA-C--CTGCTGCAGTTTGTG 4217 Query 538 aacctgatcctgctgctttccctga---tgctgc-tgc-t-ga---tgctg-c-tg-ct- 584 |||||||| ||||||||||||| || | |||| | | | || ||||| | || || Sbjct 4216 AACCTGATGCTGCTGCTTTCCCGGACGCTACTGCTTTCTTGGATCTTGCTGACTTGCCTA 4157 Query 585 -t--tcc------c-tg----ctgatgctgctgattttcctactgatgctgctgctTCCA 630 | ||| | || ||||||||||||| || |||||||||| || |||||||| Sbjct 4156 GTGATCCTGGTGACTTGCCTACTGATGCTGCTGACTTGCCTACTGATGTTGTTGCTTCCA 4097 Query 631 ATGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGACATGTTGCATCTG 690 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4096 ATGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGGTATGTTGCATCTG 4037 Query 691 TATGGTTTTCAAAGATCACTTTGTGGACAGGCCATGCTACATAAGACATTAAACAGTCCT 750 | ||||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||| Sbjct 4036 CAGGGTTTTCAAAGATAACTTTGTTGACAGGCCATGCAACAAAAGACATTAAACAGTCCT 3977 Query 751 CAA-AGTATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCA 809 ||| | || || |||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3976 CAAGA-TAAGTTACATTCATCGTTGGCCTCCATATAAACGTCTCTGGTTGAAGAACTGCA 3918 Query 810 TCGACAAATATCTTTACTGCTGC-TGGCCCGAGAGGAAGCCCATTGACTAATGCGTTGTG 868 |||||||||||||| |||||| | || || |||||||||||||||||||||||| || || Sbjct 3917 TCGACAAATATCTTCACTGCTACATGTCC-GAGAGGAAGCCCATTGACTAATGCATT-TG 3860 Query 869 -TTCTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATCCAGTA 927 ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| | Sbjct 3859 GTTCTTGTGTCTACCAACGTCCTTCTGCAACAACAACATCATTTGAAGACAAATCCAAAA 3800 Query 928 GTTTGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTT 987 | | ||||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||| Sbjct 3799 GCTGGCATTTGTT-ATTTGGTCCCTGTCAAAAACATTGAAACCCAGAAATACATTATGTT 3741 Query 988 AATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATAATAAACTTTACCTGGGCT 1047 ||||||||||||||| |||||||||||| |||||| |||||||||||||||||||| | Sbjct 3740 AATAGAAGATCATTACTCTATATATGAGAATGAGACTGAATAATAAACTTTACCTGA-CA 3682 Query 1048 T-CAATGTCTTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGC 1106 | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 3681 TGCAATGTCTTCTTGTTGGAGATCCTCTTCTAGGCTAAAACACATAGCAGCAGGCCATGC 3622 Query 1107 AATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAA 1166 ||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 3621 AATCATATGTCCAACAGCTTTTTCAATGATGAACATATTAGCCGCAAGTCTCCAAAGGAA 3562 Query 1167 TGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACA 1226 |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||| Sbjct 3561 TGCTTCTGGTTCAATAGCAGTGTCAATCAAGAATTTAACATCGGTAGGGCCTAAGCGACA 3502 Query 1227 GTCATTAACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATT 1286 |||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| ||| Sbjct 3501 GTCATTCACTAATTCATCCGGATCAGAAGAAATAATACATCCCTTAGCAACTTTTGCATC 3442 Query 1287 AGAACCAGCCCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGTA 1345 ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||| Sbjct 3441 AGAACCAGCCCAATCAAGTAAGAAACATTTTGGTTGTG-TTCTTTTGTTCACACTCTGTA 3383 Query 1346 AAAACAATAGGTAGACAAAATATCAGGTGATTGTATCTGTT-AGAATAAATCAAAGCATC 1404 ||| || || || ||| ||||| | || | ||||| ||| |||| |||||||||||| Sbjct 3382 AAAGTAAAAGATAAACATAATATTAAGTTA--GTATC-GTTTAGAACAAATCAAAGCATA 3326 Query 1405 TGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTGT 1464 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3325 TGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGCTGATTGTCTCTGT 3266 Query 1465 TACaa-aaaa-aaaGA-AAAG--AA-------GT-C-AA---A----T--GT-T--ATAT 1498 ||||| |||| ||| | |||| || || | || | | || | |||| Sbjct 3265 TACAACAAAAGAAAAACAAAGTCAAATCTTATGTACTAATTGAGCCATAAGTCTTTATAT 3206 Query 1499 ATAAATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCAT 1558 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct 3205 ATAAATAGATAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACTTCTTGTATCTCAT 3146 Query 1559 TGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCA 1618 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3145 TGACCTTCTTTTGTAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTGCA 3086 Query 1619 CTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCAG 1678 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 3085 CTTGGAAACAAGCTAACTTTGTCTTATTCATATTGCGACCCATTGCTCTCAGTCTACCAG 3026 Query 1679 GATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGATG 1738 |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 3025 GATTATCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTG----ATG--ATG 2972 Query 1739 GATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAAA 1798 |||||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||| Sbjct 2971 GATTATCACTCTTAACAATCTCTTCTGCCTTTTTCTGAAACTCATAAAATACATTTTAAA 2912 Query 1799 ATATCAAGTGTGATTCAAA-TGCCAAAATGCAAATCATTA-GAAGCAAAATAACTCACAA 1856 ||||||||||||||||||| ||||||| ||||||||| | ||| ||||||||||||||| Sbjct 2911 ATATCAAGTGTGATTCAAAATGCCAAAGTGCAAATCAA-ACGAAACAAAATAACTCACAA 2853 Query 1857 TCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACCC 1916 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2852 TCTTTTCAGTAGCATTCGTATTCACTGGTGTAGCATCTTTCTTAGTACGTGACTTAACCC 2793 Query 1917 AAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC-AAAAAA- 1974 |||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2792 AAACCTTTAGCCTTTTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAACCAAAAAAA 2733 Query 1975 T-A-C--A-------CA-A-GTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAAT 2021 | | | | || | |||||||||||||| |||||||||||||||||||||||| Sbjct 2732 TGATCTCAATTAATACATAAGTGTTTGGACTTTGTAAAAAGGCTGAGCAATATGAACAAT 2673 Query 2022 ATAAGTGT--AGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTAC 2078 |||||||| | ||| | ||||||| ||||| || ||||||||||||||||||||||||| Sbjct 2672 ATAAGTGTGTA-CAACTGTTACCATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTAC 2614 Query 2079 AAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGA 2138 |||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct 2613 AAGTATGTGGAATCTGATTGCGCTTTCTTTCCTTGTAGCTATTGCTTACAACCTAACAGA 2554 Query 2139 TGAATGTTAATTTCTA-AGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTT 2197 |||||| ||||||||| || | ||||||||||||||||||||||||||||||||||| Sbjct 2553 TGAATGCTAATTTCTATAGTA----TATAGATAAATTTACAAATTCCAAATGCATACCTT 2498 Query 2198 AAATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTT 2257 |||||||| ||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 2497 AAATTCTTGGCTTGTTTTGAGCTTCACAAATTTACGCCAATCAAAAGGAGAAATGTTTTT 2438 Query 2258 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 2317 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2437 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATATTTGTAACTTGCCT 2378 Query 2318 TGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTC 2377 ||||||||||||||| ||||| | |||||||||| ||||||||||||||||||| ||||| Sbjct 2377 TGATTTCCAGGACCTTCACAAACGTCCCATCTGCCTAAGCACTGTAACCTTTTGATACTC 2318 Query 2378 TTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACAAAACAG-CTAAGTACTCACACCAA 2436 |||||||||||||||||||||||||| ||||||||||||||| | |||||||||| | || Sbjct 2317 TTCATCTAGTTCAAACCTTGCCTGCAATCAAAAACAAAACAGTC-AAGTACTCAC-C-AA 2261 Query 2437 TAT-ATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTG 2495 ||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 2260 TATCA-AATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACTG 2202 Query 2496 TCCTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTA 2555 |||| | ||||||||| ||||| |||||||| |||||||||| ||||||||||||||||| Sbjct 2201 TCCTAAGTTCTTCACCAATTTTAGTCCAACGTTCAATTGTGACTGGAACGTGTTCTCTTA 2142 Query 2556 CCAATGCGCCTACATATGATG-CTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATG 2614 ||||||| ||||||||||||| | || ||||||||||||||||||||||||||||||||| Sbjct 2141 CCAATGCCCCTACATATGATGTC-AGCTTAACTGAGCCTTTACCAATAGGCTCTCCCATG 2083 Query 2615 TTAGTGAACTCTACT 2629 ||||||||||||||| Sbjct 2082 TTAGTGAACTCTACT 2068 Score = 649 bits (351), Expect = 0.0 Identities = 494/559 (88%), Gaps = 25/559 (4%) Strand=Plus/Minus Query 2790 CCACTTGATCTGGATCTGCTAC----T-TGAATCTGCTACTTGAACTTCAGCTGGTGCTA 2844 |||| ||||||||||||| ||| | || ||||| ||||||| ||||||||||| | Sbjct 1692 CCACCTGATCTGGATCTGGTACTTGTTCTGCATCTGATACTTGATCTTCAGCTGGTTTTG 1633 Query 2845 CATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCAT 2904 |||||| |||||||||||||||||||||||| ||| || |||||||||||||| |||| Sbjct 1632 CATGTT---CCTCATCATTGACTTGTGGTTCAATTGTTCCAATATACTCGACCTCATCAT 1576 Query 2905 TGGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTC 2961 |||||| |||||| || || |||||||||||||| | | |||||||||||||||||||| Sbjct 1575 TGGCATTCTTTGCATTGACC-TTTTTTTGTTACTTTTACCTCGCTTTTTCTTCTGTTGTC 1517 Query 2962 CCATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAAGTATA-T--ACTGAAA 3017 |||| ||||||||||||||||||||||||| || |||| |||||||| | | | || || Sbjct 1516 CCATCTTAAATCACCTGAGAAAAATGAAAG-AGTAAAGGGTTAAGTACACTGGA-TGCAA 1459 Query 3018 ATAAGACATCAAACACACTAT-GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAA 3076 ||||||||| |||||||||| ||||| ||||||||| |||||||| | ||||||| ||| Sbjct 1458 ATAAGACATTGAACACACTATGGGAAA-CAGACATCAAACATAGAGAATGCAACAAGGAA 1400 Query 3077 TGAAAATG-A--TaaaaaaaaaCTACATTTCACAAACATATATCCCTTCACAATCAGAT- 3132 |||||||| | |||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 1399 TGAAAATGAAGCAAAAAAAAAACTACATTTCACAAACATATATTCCTTCACAATCAG-TC 1341 Query 3133 CTCTCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCA 3192 ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct 1340 CTCTCATTCTCAGCTTCATCCAAGTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCA 1281 Query 3193 ATGTCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAAT 3252 ||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct 1280 ATGGCTGCAACTGAATCTAAAAACTCTTTCTTACTGAATCTTCTTGAAGAACCTCTCAAT 1221 Query 3253 GCAACATACCAAGGTGATGAGTCATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAG 3312 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1220 GCAACATACCAAGGTGATGAGTCATCTTCTCTTAGGTAAAAAACTTGTTTTGCTTGAGAG 1161 Query 3313 GCTAGTATATACGGATCCC 3331 ||||||| ||||| |||| Sbjct 1160 ACTAGTATGTACGGTTCCC 1142 Score = 141 bits (76), Expect = 4e-32 Identities = 102/114 (89%), Gaps = 3/114 (3%) Strand=Plus/Minus Query 2647 ATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTC-TCTTACGCTTTGGATCAG 2705 ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| Sbjct 1895 ATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCGT-TTACGCTTTGGCTCAA 1837 Query 2706 CACAATCATAATCCTCAGATAATACAAGCTCTCCTTCAGCCTCTTCCAC-TTGA 2758 ||||||||| | |||||||||| ||||||||||| | || ||||||| | |||| Sbjct 1836 CACAATCATCACCCTCAGATAAAACAAGCTCTCCGTGAGGCTCTTCCTCATTGA 1783 > AT5G32521.1 | Symbols: | transposable element gene | chr5:12170271-12176294 REVERSE LENGTH=6024 Length=6024 Score = 2313 bits (1252), Expect = 0.0 Identities = 1638/1814 (90%), Gaps = 68/1814 (4%) Strand=Plus/Minus Query 996 ATCATTATTCTATATATGAGTATGAGAATGAATAATAAACTTTACCTGGGCTTCAATGTC 1055 ||||||| |||||||||||| |||||| ||||||||||||||||||||| || ||||||| Sbjct 5940 ATCATTACTCTATATATGAGAATGAGACTGAATAATAAACTTTACCTGGCCTGCAATGTC 5881 Query 1056 TTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCAATCATATG 1115 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 5880 TTCTTGTTGGAGATCCTCTTCTACGCTAACACACATAGCAGCAGGCCATGCAATCATATG 5821 Query 1116 TCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAATGCTTCTGG 1175 ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| Sbjct 5820 TCCAACAGCTTTCTCAATGGTAAACATATTAGCCGCAGGTCTCCAAAGTAATGCTTCTGG 5761 Query 1176 TTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAGTCATTAAC 1235 ||||| ||||||||||||||||||||||||||| ||| ||||||| |||||| ||| || Sbjct 5760 TTCAAAAGCAGTGTCAATCAAGACTTTAACATCGGTATGGCCTAAACGACAGTTATTCAC 5701 Query 1236 TAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATTAGAACCAGC 1295 ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 5700 TAATTCACCCGAATCAGAAGAAATAATACATCCCTCAGCAACTTTTGCATCAGAACCAGC 5641 Query 1296 CCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGTAAAAACAATA 1354 |||||||||||||| |||||||||||||| || |||||||||| |||| ||||| || | Sbjct 5640 CCAATCAAGTAAGAAACATTTTGGTTGTG-TTCTTTTGTTCACCCTCTTTAAAAGTAAAA 5582 Query 1355 GGTAGACAAAATATCAGGTGATTGTATCTGTTAGAATAAATCAAAGCATCTGATATGAGT 1414 | |||||||| ||| | || | |||||||||||||| |||||||||||| |||||||||| Sbjct 5581 GATAGACAAAGTATTAAGTTAGTGTATCTGTTAGAACAAATCAAAGCATATGATATGAGT 5522 Query 1415 GACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTGTTAC---aaaa 1471 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 5521 GACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGCTGATTGTCTCTGTTACAAAAAAA 5462 Query 1472 -aaaaaG-AA--AAGA----A-GT-C------A-----AA-T-GTTATATATAAATAGTT 1508 |||||| || || | | || | | || | |||||||||||||| | Sbjct 5461 GAAAAAGAAAGTAAAATCTTATGTACTAATTGAGCCGTAATTCTTTATATATAAATAGAT 5402 Query 1509 AAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCATTGACCTTCTT 1568 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 5401 AAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACTTCTTGTAGCTCATTGACCTTCTT 5342 Query 1569 CTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCACTTGGAAACA 1628 || ||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 5341 TTGTAGACGAAGCTGATTCTCTTGCATTTCAGCGATACACTTGTGCTT-ACTTGGAAACA 5283 Query 1629 AGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCAGGATTGTCAGG 1688 || |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 5282 AGATAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCAGTCTACCAGGACTGTCAGG 5223 Query 1689 CCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGATGGATTATCACT 1748 ||||||||||||||||| |||||||||||||||| | ||| | ||||||||||||||| Sbjct 5222 CCCTAACAGTTGGCTTAATGAATCTTGTGCTTCA--T-TTG--T-TGATGGATTATCACT 5169 Query 1749 GTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAAAATATCAAGTG 1808 ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5168 ATTAACAATCTCTTCTGCCTTTTTCTGAAATTCATAAGATACATTTTAAAATATCAAGTG 5109 Query 1809 TGATTC-AAATGCCAAAATGCAAATC-ATTAGAAGCAAAATAACTCACAATCTTTTCAGC 1866 |||||| ||||| ||||||||||||| | | || ||||||||||||||||||||||||| Sbjct 5108 TGATTCAAAATGACAAAATGCAAATCAAACA-AAACAAAATAACTCACAATCTTTTCAGC 5050 Query 1867 AGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACCCAAACCTTTAG 1926 | |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 5049 AACATTCGTATTCAGTGGTGTACCATCCTTCTTAGTACGTGACTTAACCCAAACCTTTAG 4990 Query 1927 GCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC---AAAAAAT-A---C-- 1977 | ||||||||||||||||||||||||||||||||||||||| ||||||| | | Sbjct 4989 CCTTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAACAAAAAAAAATGATCTCAT 4930 Query 1978 -----AC--AAGTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAATATAA--GTG 2028 || ||||||||||||||||| ||||||||||| |||||||||||||||| ||| Sbjct 4929 TTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGTAATATGAACAATATAAGTGTG 4870 Query 2029 TAGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAGTGTGTG 2087 || ||| | ||||||| ||||| || ||| ||||||||||||||||||||||||| |||| Sbjct 4869 TA-CAACTGTTACCATGTCTTCGGCAAGTTTAACCATTCCCCTGCGACTACAAGTATGTG 4811 Query 2088 GAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAATGTTA 2147 ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| Sbjct 4810 GAATCTGATTGCGCCTTCTTTCCTTGTAGCTGTCGCTTATAACCTAACAGATGAACGTTA 4751 Query 2148 ATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTTG 2207 |||||| | | | |||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4750 ATTTCT-A--ATATATATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTGG 4694 Query 2208 CTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATG 2267 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct 4693 CTAGTTTTGAGCTTCATAAATTTACGCCAATCAAAAGGAGAAATGTTTTTAGGTCGCATG 4634 Query 2268 TTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAG 2327 ||||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||| Sbjct 4633 TTCATCCTCTCGTGGTTAGTTTTAGCTTCTCTAATCTTTGTAACTTGCCATGATTTCCAG 4574 Query 2328 GACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGT 2387 ||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 4573 GACCTCCACAAACGTCCCATCTGCCTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGT 4514 Query 2388 TCAAACCTTGCCTGCACTCAAAAACAAAACAG-CTAAGTACTCACACCAATAT-ATAATA 2445 |||||||||||||||| ||||||||||||||| | |||||||||| | ||||| | |||| Sbjct 4513 TCAAACCTTGCCTGCAATCAAAAACAAAACAGTC-AAGTACTCAC-C-AATATCA-AATA 4458 Query 2446 AACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTC 2505 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| Sbjct 4457 AACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACTGTCCTGAGTTC 4398 Query 2506 TTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCC 2565 |||||| ||||| |||||||| |||||||||| | |||||||||||||||||||||| || Sbjct 4397 TTCACCAATTTTAGTCCAACGTTCAATTGTGACTAGAACGTGTTCTCTTACCAATGCCCC 4338 Query 2566 TACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTC 2625 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 4337 TACATATGATGCCAGCTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTC 4278 Query 2626 TACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATG 2685 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 4277 TACTCTTACTCTGGCATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTTGTCCTCGATG 4218 Query 2686 TCTCTTACGCTTTGGATCAGCACAATCATAATCCTCAGATAATACAAGCTCTCCTTCAGC 2745 || |||||||||||| ||| ||||||||| | |||||||||| ||||||||||| | || Sbjct 4217 TCGCTTACGCTTTGGCTCAACACAATCATCACCCTCAGATAAAACAAGCTCTCCGTGAGG 4158 Query 2746 CTCTTCCAC-TTGA 2758 ||||||| | |||| Sbjct 4157 CTCTTCCTCATTGA 4144 > AT2G11590.1 | Symbols: | transposable element gene | chr2:4635950-4641226 REVERSE LENGTH=5277 Length=5277 Score = 1648 bits (892), Expect = 0.0 Identities = 1103/1199 (92%), Gaps = 38/1199 (3%) Strand=Plus/Minus Query 1582 TGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCACTTGGAAACAAGCTAACTTGGTC 1641 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 5275 TGATTCTCTTGCATTTCAGCCATACGCTTGTGCTTCACTTGGAAACAAGCTAACTTAATC 5216 Query 1642 TTATTCATATTGCGACCCATTGCTCTCATTCTACCAGGATTGTCAGGCCCTAACAGTTGG 1701 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 5215 TTATTCATATTGCGACCCATTGCTCTCAGTCTACCAGGATTGTCAGGCCCTAACAATTGG 5156 Query 1702 CTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGATGGATTATCACTGTTAACAATCTCC 1761 |||||||||||| |||||||| | ||| | ||||||||||||||| ||||||||||| Sbjct 5155 CTTAGTGAATCTGGTGCTTCA--T-TTG--T-TGATGGATTATCACTATTAACAATCTCT 5102 Query 1762 TCTGCCTTTTTCTGAAACTCATAAGATACATATTAAAATATCAAGTGTGATTC-AAATGC 1820 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 5101 TCTGCCTTTTTCTGAAACTCATAAGATACATTTTAAAATATCAAGTGTGATTCAAAATGC 5042 Query 1821 CAAAATGCAAATCATTAGAAGCAA-AATAACTCACAATCTTTTCAGCAGCATTCGTATTC 1879 |||||||||||||| | | | || ||||||||||||||||||||||||||||||||||| Sbjct 5041 CAAAATGCAAATCA--A-ACGAAACAATAACTCACAATCTTTTCAGCAGCATTCGTATTC 4985 Query 1880 ACTGGTGTACCATCTTTCTTAGTACGTGACTTAACCCAAACCTTTAGGCGTGTCACTTCA 1939 |||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||| Sbjct 4984 ACTGGTGTACCATCCTTCTTAGTACGTGACTTAACCCAAACCTTTAGCCTTGTCACTTCA 4925 Query 1940 GATGGGTCTGCACTAGCAGTTTTCTAAA-CAA-AAAAT-A-C---------AC--AAGTG 1984 |||||||||||||||||||||||||||| ||| ||||| | | || ||||| Sbjct 4924 GATGGGTCTGCACTAGCAGTTTTCTAAACCAAGAAAATGATCTTAGTTAATACATAAGTG 4865 Query 1985 TTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAATATAA--GTGTAGCAA-TATTACC 2041 |||||||||||| |||||||||||||||||||||||||||| ||||| ||| | ||||| Sbjct 4864 TTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAATATAAGTGTGTA-CAACTGTTACC 4806 Query 2042 ATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAGTGTGTGGAATCTGATTGCGC 2101 || ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 4805 ATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTACAAGTATGTGGAATCTGATTGCGC 4746 Query 2102 CTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAATGTTAATTTCTAAGGAAAG 2161 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 4745 CTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAATGTTAATTTCTATTGTA-- 4688 Query 2162 ATATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTT 2221 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4687 -TATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTT 4629 Query 2222 CACAAATTTACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATGTTCATCCTCTCTTG 2281 |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 4628 AACAAATTTACGCCAATCAAAAGGAGAAATGTTTTTGGGTCGCATGTTCATCCTCTCTTG 4569 Query 2282 GTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCA 2341 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 4568 GTTAGTAATAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTTCACAAACA 4509 Query 2342 TCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTG 2401 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 4508 TCCCATCTGCCTAAGCACTGTAACCTTTTGGTACTTTTCATCTAGTTCAAACCTTGCCTG 4449 Query 2402 CACTCAAAAACAAAACAG-CTAAGTACTCACACCAATATATAATAAACTTGTAAATTTTA 2460 || ||||||||||||||| | |||||||||| | ||||| |||||||||||||||||||| Sbjct 4448 CAATCAAAAACAAAACAGTC-AAGTACTCAC-C-AATATCTAATAAACTTGTAAATTTTA 4392 Query 2461 CACAAATCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATTTTTGT 2520 |||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||| || Sbjct 4391 CACAAAGCTTACCTGAACAGATTTCCAGAGAACTGTCCTGAGTTCTTCACCAATTTTAGT 4332 Query 2521 CCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGATGCTAG 2580 |||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 4331 CCAACGTTCAATTGTGACTGGAACGTGTTCTCTTACCAATGCACCTACATATGATGCCAG 4272 Query 2581 TTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTCTACTCTTACTCTGGT 2640 |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 4271 CTTAACTGAGCCTTTACGAATAGGCTCTCCCATGTTAGTGAACTCTACTTTTACTCTGGT 4212 Query 2641 ATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACGCTTTGG 2700 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 4211 ATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCGCTTACGCTTTGG 4152 Query 2701 ATCAGCACAATCATAATCCTCAGATAATACAAGCTCTCCTTCAGCCTCTTCCAC-TTGA 2758 ||| ||||||||| | |||||||||| |||||||||| | || ||||||| | |||| Sbjct 4151 CTCAACACAATCATCACCCTCAGATAAAACAAGCTCTCGGTGAGGCTCTTCCTCATTGA 4093 Score = 641 bits (347), Expect = 0.0 Identities = 491/557 (88%), Gaps = 24/557 (4%) Strand=Plus/Minus Query 2791 CACTTGATCTGGATCTGCTACTTGAATCTG---CT---ACTTGAACTTCAGCTGGTGCTA 2844 ||| |||||||||||| ||||||| ||||| || |||||||||||||||||| || Sbjct 4001 CACCTGATCTGGATCTTCTACTTG-ATCTGCATCTGAAACTTGAACTTCAGCTGGTTCTG 3943 Query 2845 CATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCAT 2904 ||| || |||||||||||||||||||||||| ||| || |||||||||||||| |||| Sbjct 3942 CATATT---CCTCATCATTGACTTGTGGTTCAATTGTTCCAATATACTCGACCTCATCAT 3886 Query 2905 TGGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTC 2961 |||||| |||||| || ||||||||||||||||| | | |||||||||||||||||||| Sbjct 3885 TGGCATTCTTTGCATTGACCTTTTTTTTGTTACTTTTACCTCGCTTTTTCTTCTGTTGTC 3826 Query 2962 CCATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAAGTATA-T--ACTGAAA 3017 |||| |||||||||| |||||||||||||| || |||| |||||||| | | | || || Sbjct 3825 CCATCTTAAATCACCGGAGAAAAATGAAAG-AGTAAAGGGTTAAGTACACTGGA-TGCAA 3768 Query 3018 ATAAGACATCAAACACACTAT-GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAA 3076 ||||||||| |||||||||| ||||| ||||||||| |||||||| | ||||||| ||| Sbjct 3767 ATAAGACATTGAACACACTATGGGAAA-CAGACATCAAACATAGAGAATGCAACAAGGAA 3709 Query 3077 TGAAAATG-ATaaaaaaaaaCTACATTTCACAAACATATATCCCTTCACAATCAGAT-CT 3134 |||||||| | |||||||||||||||||||||||||| || |||| ||||| || | || Sbjct 3708 TGAAAATGAAGCAAAAAAAACTACATTTCACAAACATAAATTCCTTTACAATTAG-TCCT 3650 Query 3135 CTCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCAAT 3194 ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct 3649 CTCATTCTCAGCTTCATCCAAGTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCAAT 3590 Query 3195 GTCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAATGC 3254 | ||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| Sbjct 3589 GGCTGCAACTGAATCTACAAACTCTTTCTGACTAAATCTTCTTGAAGAACCTCTCAATGC 3530 Query 3255 AACATACCAAGGTGATGAGTCATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAGGC 3314 ||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 3529 AACATACCAAGGTGATGAGTCATCTTCTCTTAGGTAAAAAACCTGTTTTGCTTGAGAGGC 3470 Query 3315 TAGTATATACGGATCCC 3331 |||||| || ||||||| Sbjct 3469 TAGTATGTATGGATCCC 3453 > AT2G11550.1 | Symbols: | transposable element gene | chr2:4626902-4631904 REVERSE LENGTH=5003 Length=5003 Score = 1208 bits (654), Expect = 0.0 Identities = 838/923 (91%), Gaps = 27/923 (3%) Strand=Plus/Minus Query 1855 AATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAAC 1914 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5003 AATCTTTTCAGCAACATTCGTATTCACTGGTGTACCATCCTTCTTAGTACGTGACTTAAC 4944 Query 1915 CCAAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAA-CAAAAA 1973 |||||||||||| | ||||||||||||||||||| || ||||||||||||||| |||||| Sbjct 4943 CCAAACCTTTAGCCTTGTCACTTCAGATGGGTCTCCATTAGCAGTTTTCTAAACCAAAAA 4884 Query 1974 AT-A-C---------AC--AAGTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAA 2020 || | | || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 4883 ATGATCTTAGTTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAA 4824 Query 2021 TATAA--GTGTAGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTA 2077 ||||| ||||| ||| ||||||||| ||||| || |||||||||||||||||||||||| Sbjct 4823 TATAAGTGTGTA-CAACTATTACCATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTA 4765 Query 2078 CAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 2137 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4764 CAAGTCTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 4705 Query 2138 ATGAATGTTAATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTT 2197 ||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| Sbjct 4704 ATGAATGTTAATTTCTATTGTA---TATAGATAAATTTACAAATTCCAAATGCATACCTT 4648 Query 2198 AAATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTT 2257 |||||||| |||||||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct 4647 AAATTCTTGGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAAAGAAGAAATGTTTTT 4588 Query 2258 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 2317 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4587 GGGTCGCATGTT-ATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 4529 Query 2318 TGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTC 2377 ||||||| ||||||||||||| ||| |||||| | ||||||||||||||||||||||||| Sbjct 4528 TGATTTCAAGGACCTCCACAAACATTCCATCTACCTAAGCACTGTAACCTTTTGGTACTC 4469 Query 2378 TTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACAAAACAG-CTAAGTACTCACACCAA 2436 |||||| ||||||||| ||||||| | ||||||||||||||| | |||||||||| | || Sbjct 4468 TTCATCAAGTTCAAACTTTGCCTGTAGTCAAAAACAAAACAGTC-AAGTACTCAC-C-AA 4412 Query 2437 TATATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGT 2496 ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 4411 TATCTAATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACTGT 4352 Query 2497 CCTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTAC 2556 ||||| ||||||||| ||||| ||||||| |||||||||| |||||||||||||||||| Sbjct 4351 CCTGAGTTCTTCACCAATTTTACTCCAACGTTCAATTGTGACTGGAACGTGTTCTCTTAC 4292 Query 2557 CAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTT 2616 |||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||| Sbjct 4291 CAATGCCCCTACATATGATGCCAGCTTAACTGAGCCTTTACCAATAGTCTCTCCCATGTT 4232 Query 2617 AGTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGG 2676 || |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| Sbjct 4231 AGCGAACTCTACTCTTACTCTTGCATTTGGATCCTTGGCAATATCCTTCAGCCTAATTGG 4172 Query 2677 TCCTCGATGTCTCTTACGCTTTGGATCAGCACAATCATAATCCTCAGATAATACAAGCTC 2736 ||||||||||| |||||||||||| ||| || || ||| | ||| |||||| |||||||| Sbjct 4171 TCCTCGATGTCGCTTACGCTTTGGCTCAACATAAACATCACCCTAAGATAAAACAAGCTC 4112 Query 2737 TCCTTCAGCCTCTTCCAC-TTGA 2758 ||| | || ||||||| | |||| Sbjct 4111 TCCGTGAGGCTCTTCCTCATTGA 4089 Score = 658 bits (356), Expect = 0.0 Identities = 493/556 (89%), Gaps = 22/556 (4%) Strand=Plus/Minus Query 2791 CACTTGATCTGGATCTGCTACTTGA-----ATCTGCTACTTGAACTTCAGCTGGTGCTAC 2845 ||| |||||| |||||||||||||| ||||| ||||||||||||||||||| |||| Sbjct 3997 CACCTGATCTAGATCTGCTACTTGATCTGCATCTGATACTTGAACTTCAGCTGGTTCTAC 3938 Query 2846 ATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCATT 2905 ||||| |||||||||||||||||||||||| ||| || |||||||||||||| ||||| Sbjct 3937 ATGTT---CCTCATCATTGACTTGTGGTTCAATTGTTCCAATATACTCGACCTCATCATT 3881 Query 2906 GGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTCC 2962 ||||| |||||| || ||||||||||||||||| | | |||||||||||| |||||||| Sbjct 3880 GGCATTCTTTGCATTGACCTTTTTTTTGTTACTTTTACCTCGCTTTTTCTTTTGTTGTCC 3821 Query 2963 CATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAAGT--ATAT-ACTGAAAA 3018 ||| ||||||||| ||||||||||||||| || |||| ||||||| | || | || ||| Sbjct 3820 CATCTTAAATCACATGAGAAAAATGAAAG-AGTAAAGGGTTAAGTACACATGA-TGCAAA 3763 Query 3019 TAAGACATCAAACACACTAT-GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAAT 3077 |||||||| |||||||||| ||||| ||||||||| |||||||| | ||||||| || | Sbjct 3762 TAAGACATTGAACACACTATGGGAAA-CAGACATCAAACATAGAGAATGCAACAAGGAGT 3704 Query 3078 GAAAATG-ATaaaaaaaaaCTACATTTCACAAACATATATCCCTTCACAATCAGAT-CTC 3135 ||||||| | |||||||||||||||||||||||||| || ||||||||||||| | ||| Sbjct 3703 GAAAATGAAGCAAAAAAAACTACATTTCACAAACATAAATTCCTTCACAATCAG-TCCTC 3645 Query 3136 TCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCAATG 3195 |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| Sbjct 3644 TCATTCTCAGCTTCATCCAAGTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCAATG 3585 Query 3196 TCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAATGCA 3255 ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 3584 GCTGCAACTGAATCTACAAACTCTTTCTGACTAAATCTTCTTGAAGAACCTCTCAATGCA 3525 Query 3256 ACATACCAAGGTGATGAGTCATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAGGCT 3315 |||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct 3524 ACATACCAAGGTGATGAGTCATCTTCTCTTAGGTAAAAAACCTGTTTTGCTTGAGAGGCT 3465 Query 3316 AGTATATACGGATCCC 3331 ||||| || ||||||| Sbjct 3464 AGTATGTATGGATCCC 3449 > AT5G32487.1 | Symbols: | transposable element gene | chr5:12119770-12122316 REVERSE LENGTH=2547 Length=2547 Score = 1074 bits (581), Expect = 0.0 Identities = 898/1040 (86%), Gaps = 66/1040 (6%) Strand=Plus/Minus Query 14 AACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATACTCGATTTCA 73 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1638 AACTTACCCATTGGCCATGCAATAGATGAACCAAGTGAATCTCTCATATACTCGATTTCA 1579 Query 74 TCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTAGCT 133 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1578 TCTGATGCCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTAGCT 1519 Query 134 GCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGCACACGT 193 |||||| | |||||||||||||||||||||||| ||||||||| || ||||||||||||| Sbjct 1518 GCATTATCTCCCAAGCGAACATGGTGTACCTTTTGGTCTGGGTAGACTGAATGCACACGT 1459 Query 194 CCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTGATTGGCC 253 ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct 1458 CCTTCAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACACTTCTGTTTGGCC 1399 Query 254 TTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAACCAGGTTTAATGCA 313 ||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||| | Sbjct 1398 TTGCTAACTTCAGCTACACCTTTACGCTGCCATGTTACAATATAAACCAGTTTTAATGTA 1339 Query 314 TGTAGAAAAATAACCAGATTC-A-A--TAGGTAAAAACAATAAACAAAATACCGGAGATC 369 ||||||||||||||||||||| | | ||||||| ||||| ||||||||||||||||||| Sbjct 1338 TGTAGAAAAATAACCAGATTCAATAGCTAGGTAATAACAACAAACAAAATACCGGAGATC 1279 Query 370 TTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACTTTGAACCTG 429 |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| Sbjct 1278 TTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGATAGGAGAATTTGAACCTT 1219 Query 430 TAGCTGTGGACTTCTCAGCTA-GAGCTTTTGAAACTGTTGCAACGGATTTTGTACCTTTT 488 ||||||||||||||||||||| | || ||||||| | ||||||| ||||||||||||||| Sbjct 1218 TAGCTGTGGACTTCTCAGCTATG-GCCTTTGAAATTATTGCAACAGATTTTGTACCTTTT 1160 Query 489 GTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctgcagtttgtgaacctgatcct 548 | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1159 GCTGTAGATATCTCAGGGGATGGCTTATAACCTGCTGCTGCAGTTTGTGAACCTGATGCT 1100 Query 549 gctgc--tttc----cctgatgctgctgct-----g-atgctgctgctttccctgctgat 596 ||||| ||| ||||||||||||||| | | ||| |||||||| | | ||| Sbjct 1099 GCTGCAGTTTGTGAACCTGATGCTGCTGCTTTCCCGGACGCTACTGCTTTCTC-G--GAT 1043 Query 597 gctgctgattttcctactgatgct-gctg-ctT-CC-A---ATG--G-TGATTTTCCT-C 645 ||||| | || ||||||||| || |||| ||| || | ||| | ||| || ||| | Sbjct 1042 CCTGCTAACTTGCCTACTGAT-CTTGCTGACTTGCCTACTGATGCTGCTGACTTGCCTAC 984 Query 646 T--TGCAGCAGAAGTCTGAAGTGGAGATTT-C-TGACATGTTGCA----TCTGTA-TGG- 695 | ||| || | || || ||| ||||| | | | ||| ||| |||| | ||| Sbjct 983 TGATGCTGCTGCTTTC--AA-TGGTGATTTTCCT--CTTGTAGCAGAAGTCTGAAGTGGA 929 Query 696 --TTT-T--CAAAGAT-CA-CTTT-GTG--GACAGGCCATGCTACATAAGACA-TTAAAC 744 ||| | || | | || || | | |||||||||||| ||| |||||| |||| | Sbjct 928 GATTTCTGGCAT-GTTGCATCTGCAGGGTTGACAGGCCATGCAACAAAAGACAATTAA-C 871 Query 745 AGTCCTCAA-AGTATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGA 803 ||||||||| | || ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 870 AGTCCTCAAGA-TAAGTCACATCCATCGTTGGCCTCCATATAAACGTCTCTGGTTGAAGA 812 Query 804 ACTGCATCGACAAATATCTTTACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGCG 863 |||||||||||||||||||| | |||||| || |||||||||||||||||||||||||| Sbjct 811 ACTGCATCGACAAATATCTTCATTGCTGCAGGTCCGAGAGGAAGCCCATTGACTAATGCA 752 Query 864 TTGTG-TTCTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATC 922 || || ||||||||||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct 751 TT-TGGTTCTTGTGTCTGCCAACATCCTTCTGCAACAACAACATCATTTGAAGACAAATC 693 Query 923 CAGTAGTTTGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATT 982 || || | | ||||||| | ||||||||| |||||||||| |||||||| ||||||||| Sbjct 692 CAAAAGCTGGTATTTGTT-ATTTGGTCCCTGTCAAAAACATAGAAACCCAGAAATACATT 634 Query 983 GTGTTAATAGAAGATCATTA 1002 ||||||||||||||||||| Sbjct 633 ATGTTAATAGAAGATCATTA 614 > AT2G14970.1 | Symbols: | transposable element gene | chr2:6457721-6461341 REVERSE LENGTH=3621 Length=3621 Score = 1040 bits (563), Expect = 0.0 Identities = 1451/1857 (78%), Gaps = 152/1857 (8%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 ||| ||| | |||||||||||| ||||||||||||| | ||||||||||||||||||||| Sbjct 3215 TCAGTAGGTCACCAACTTATCCTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 3156 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120 ||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| || Sbjct 3155 ATACTCGATTTCATCTGATGGCCTCCAGACTGCTGTATCATCTACATTCACTACATCTAC 3096 Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180 |||||||||||||||||| | ||||| |||||||||||||||||| | |||||||| || Sbjct 3095 CCAAACTCTAGCTGCATTCTCTCCCAAACGAACATGGTGTACCTTTTGATCTGGGTCTAT 3036 Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240 ||||||||| |||||| || |||||||| ||||||||||||| |||||||||||||| || Sbjct 3035 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCA 2976 Query 241 CTTCTGATTGGCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATA 297 ||||||||| ||||| | ||| ||||| | |||| ||||| || ||||||| |||| Sbjct 2975 CTTCTGATTAGCCTTCA-AACCTTCAGATGTT-TTTTGGCGCTGACA-TGTTACATTATA 2919 Query 298 AACCAGGTTTAAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAA 356 ||||||| |||| ||||||||||| | | || | ||||| || ||| ||| | |||| Sbjct 2918 AACCAGGATTAAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-ATACAA 2862 Query 357 AAT-ACCGGAGATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACA 413 | | ||||||||||| | | |||| | ||| |||| | | |||||| ||||||| ||| Sbjct 2861 ACTTACCGGAGATCTCCGT-AGAGCG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACA 2807 Query 414 AAAGACTTTG-AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCA 470 |||||||| ||| |||| | | || ||||||| | |||| ||||| || |||| | Sbjct 2806 TGAGACTTTGGAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCT 2750 Query 471 ACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgc 529 | |||| || ||| || | || ||||| || || || | |||| ||||| || | | Sbjct 2749 GCAGATTCTGAACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCC 2691 Query 530 agtttgt-gaacctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgc 583 ||||| | || || || ||||| || || || | | || ||| |||| | | Sbjct 2690 T-TTTGTTGCTCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTGTTGCTCCAT-- 2638 Query 584 tttccctg-ct-gatgctgctgattttcctactgatgctgctgctTCCAATGG-TGATTT 640 ||| || || | ||||||||| |||||| ||| |||| || || ||| | | || Sbjct 2637 TTTGT-TGACTTGCTGCTGCTGACTTTCCTTTTGAGGCTGATG-TTGT--TGGATAAGTT 2582 Query 641 TCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTTT 698 | | | || | | ||||||| |||| ||||||| | || || |||||| || ||| Sbjct 2581 GA-T-T-G-AG-A-AC-TCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGTGGTG-TTT 2531 Query 699 TCAAAG-ATCACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAGT 756 ||| || | ||||||||| |||||||||||||| ||||| | |||||||||||||| || Sbjct 2530 TCATAGGAA-ACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGGT 2473 Query 757 ATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACAA 816 |||||||||||||||||||||||||||| || ||||| |||||||| | | |||| |||| Sbjct 2472 ATGTCACATCCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACAA 2413 Query 817 ATATCTTT-ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCTT 873 ||| |||| ||||| || || |||| |||||||||||| |||||||| | ||| || ||| Sbjct 2412 ATA-CTTTCACTGCAGCAGGTCCGA-AGGAAGCCCATTAACTAATGCAGATTG-GT-CTT 2357 Query 874 GTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTTG 932 |||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| Sbjct 2356 CTGTCTGCCAACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTTG 2298 Query 933 CATTTGTT-C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACAT 981 || ||||| | | |||||||||| ||||| ||||| ||||| || | | | Sbjct 2297 CACTTGTTTCCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C-T 2243 Query 982 TGTGTTAATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTTA 1039 | || | | || || | | | |||| | ||||||| |||||| |||| | |||| Sbjct 2242 TA-GT-A-T-GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTTA 2194 Query 1040 CCTGGGCTTCAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCA 1098 |||| || |||||||||| | ||| || | ||| |||||| |||||||||||||| || Sbjct 2193 CCTGTGC---AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAACA 2138 Query 1099 GGCCATGCAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTC 1158 ||||| || ||||| || |||||||||||||| || | ||||||| || |||||| Sbjct 2137 GGCCAAGCTATCATCTGACCAACAGCTTTCTCCATAATTTCCATGTTAATTGCGGGTCTC 2078 Query 1159 CAAAGGAATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCT 1218 |||||| ||||||||||| |||| |||||||||||||| ||||||||||| ||||| ||| Sbjct 2077 CAAAGGTATGCTTCTGGTACAATCGCAGTGTCAATCAATACTTTAACATCTGTAGGACCT 2018 Query 1219 AAGGGACAGTC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAA 1276 ||| ||| || ||| |||| | ||| ||||||||||||| |||||||| |||||| ||| Sbjct 2017 AAGCGACT-TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAACAA 1960 Query 1277 CTTTTACATTAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTC 1335 | || ||| || |||||||||||| | | |||| ||| || ||||||||| || |||| Sbjct 1959 CGGTTGCATCAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTTC 1901 Query 1336 ACACTCTGTAAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATAA 1393 |||||||||| || ||| | ||| | | ||||| | ||| || || | || || Sbjct 1900 ACACTCTGTATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAA-AA 1849 Query 1394 -ATCAAA-GCATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGG 1451 |||||| | ||| ||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct 1848 GATCAAAAGTATCAAATAAAAGTGACTTACTCTTGCAGCTGAGGTTTCACCAACTTCAGC 1789 Query 1452 TGATTGTCTCTGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TT 1494 ||||||||||||| || ||||||||| | |||| || || | || || | || Sbjct 1788 TGATTGTCTCTGT-ACCAAAAAAAAAAACAAAGTCAAATATATGTACTAACCGATTGATT 1730 Query 1495 A--TATAT--A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCT 1548 | | ||| | || ||| ||||| || | |||||||| || || |||||||| ||| Sbjct 1729 AGCTTTATGCATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCT 1672 Query 1549 TGTAGCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACAC 1608 |||| |||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct 1671 TGTAACTCATTGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACAT 1612 Query 1609 TTG-TGCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCT 1667 ||| | || |||||||||||||||| |||||||| |||||||| | ||||| || || Sbjct 1611 TTGCTTTTT-ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCT 1553 Query 1668 CATTCTACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGT 1727 | ||||| |||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 1552 TAATCTACTAGGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGT 1493 Query 1728 TGCATGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783 ||| |||| || | ||||| |||||||||| ||||||||||||| |||| ||| Sbjct 1492 CCCATTTGATTGAGGACCACTGCTAACAATCTCAGCTGCCTTTTTCTGCAAAC-CAT 1437 Score = 604 bits (327), Expect = 1e-171 Identities = 761/959 (79%), Gaps = 75/959 (8%) Strand=Plus/Minus Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGA 1908 ||||| ||| |||||||| ||||| |||||||||||||| |||| |||||| || ||||| Sbjct 1246 ACTCATAATTTTTTCAGCCGCATTTGTATTCACTGGTGTTCCATATTTCTTGGTCCGTGA 1187 Query 1909 CTTAACCCAAACCTTTAGGCGT-GTCACTTCAGATGGGTCTGCACTAGCAGTTTTCT--- 1964 ||||||||||||||||| || | |||||||||| ||||||||||||| || |||||| Sbjct 1186 CTTAACCCAAACCTTTA-GCCTCGTCACTTCAGTTGGGTCTGCACTACCAATTTTCTGAA 1128 Query 1965 AAACAAAAAATACACAAGTGTT--T-G-GA-CT---T-TGGGAA-AA-GGCTGAGCAATA 2013 ||||| || || | ||| | || | | | || | | || || | ||||||| Sbjct 1127 AAACACAACATGC-CAA-TATTAGTAGCAAGCTAAGTGTTTTAAGAATTTCAAAGCAATA 1070 Query 2014 TGAACAATATAA-GT-GTAG-CA-AT---ATTACCATATCTTCTGCTAGTCTAACCATTC 2066 || || |||| | || || || ||||||||||||||||| |||||||||| || Sbjct 1069 --AAAAACATAACCTAACAGACACATAAGATTACCATATCTTCTGCAAGTCTAACCA-TC 1013 Query 2067 CC-CTGCGACTACAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTT 2125 || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct 1012 CCTCTGCGACTACAAGTGTGAGGAATCTGGTTGCGCCTTCTCTCCTTGTAGCTATCGCTT 953 Query 2126 ACAACCTAAC-A-GA-TG--AA-T-GTTAA-TTTCT--A-AGGAAAGATA--TAGATAAA 2172 | |||||||| | || || || | | ||| ||||| | || ||| ||| ||| | || Sbjct 952 ATAACCTAACAATGATTGTTAATTAG-TAACTTTCTACATAGTAAATATACTTAGTTTAA 894 Query 2173 T-TTACAAATTCC-AAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTTCACAAATTT 2230 | || | | || || |||||||||||||| |||||||||| |||||||||||| Sbjct 893 TCTT-C---TCCCTCAA--CATACCTTAAATTCAGGGCTAGTTTTGCTCTTCACAAATTT 840 Query 2231 ACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATG-TTCATCCTCT-CTTGGTTAGTC 2288 | ||| ||||||||||||| ||||||||||| || | |||||||||| | ||||| ||| Sbjct 839 TCTCCACTCAAATGGAGAAACATTTTTAGGTCTCA-GATTCATCCTCTGC-TGGTTTGTC 782 Query 2289 TTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATC 2348 || |||||||||| || || |||||||||||||||||||| |||||||| |||||||| Sbjct 781 TTTGCTTCTCTAAACTTAGTTACTTGCCTTGATTTCCAGGATCTCCACAAACATCCCATT 722 Query 2349 TGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAA 2408 ||||||||||||| ||||||||| ||||| ||||||||||||||| |||||| || |||| Sbjct 721 TGCTTAAGCACTGCAACCTTTTGATACTCCTCATCTAGTTCAAACTTTGCCTTCAATCAA 662 Query 2409 AAACA-AAACA--GCTAAGTAC--TCA-CACCAATATATAAT-AAA-CTT-GTAAATTTT 2459 ||| ||| | | | | | | | | | || | ||| | ||| || ||| | Sbjct 661 TTACAGAAAAAGTGATTATTGCTGTGATAAGGAA-AGATAGTCAAATATTACAAAAAAAT 603 Query 2460 ACACA---AA-TCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATT 2515 | | | || | |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 602 AAAAAGTGAAGTGTTACCTGGACAGATTTCCAGAGAAGTGTCCTGATTTCTTCACCTATT 543 Query 2516 TTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGAT 2575 |||||||| |||| ||||||||| || |||||||| | |||||||||||| |||||||| Sbjct 542 TTTGTCCACCGATTAATTGTGATAGGGACGTGTTCACGGACCAATGCGCCTGCATATGAT 483 Query 2576 GCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTCTACTCTTACT 2635 |||| |||||||||||||||||||||||||||||||| | ||| |||| ||||| ||| Sbjct 482 GCTAACTTAACTGAGCCTTTACCAATAGGCTCTCCCATCATGGTGTACTCCACTCTCACT 423 Query 2636 CTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACG- 2694 |||| |||||||||||| |||||||| |||| |||||||||||| || || ||||| | Sbjct 422 CTGGCATTTGGATCCTTAGCAATATCTTTCATCCTAGTTGGTCCACGTTGCCTCTTG-GT 364 Query 2695 CTTTGGATCAGCA-CAATCATAATCCTC-AGATAATACAAGCTCTCCTTCAGCCTCTTC 2751 ||| || | | || || || | ||| || ||||||| ||||||| ||||||| ||||| Sbjct 363 CTTAGGTTGAACAACA-TCTTCATC-TCCAGATAATTCAAGCTCGCCTTCAGGTTCTTC 307 > AT5G28526.1 | Symbols: | transposable element gene | chr5:10515532-10521998 REVERSE LENGTH=6467 Length=6467 Score = 1033 bits (559), Expect = 0.0 Identities = 1443/1847 (78%), Gaps = 152/1847 (8%) Strand=Plus/Minus Query 11 ACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATACTCGATT 70 |||||||||||| |||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 6460 ACCAACTTATCCTTTGGCCATACAATTGATGAACCAAGTGAATCTCTCATATACTCGATT 6401 Query 71 TCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTA 130 ||||||||||||||||| ||||||| |||||||| ||||||| ||| |||||||||||| Sbjct 6400 TCATCTGATGGCCTCCAGACTGCTGAATCATCTACATTCACTACATCTACCCAAACTCTA 6341 Query 131 GCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGCACA 190 |||||||| | ||||| | |||||||||||||||| | |||||||| ||||||||||| Sbjct 6340 GCTGCATTCTCTCCCAAACAAACATGGTGTACCTTTTGATCTGGGTCTATTGAATGCACT 6281 Query 191 CGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTGATTG 250 |||||| || |||||||| ||||||||||||| |||||||||||||| ||||||||||| Sbjct 6280 CGTCCTGCACCAACCACCCGCTTCTTTCCACTCATATCCATTAACTTGCACTTCTGATTA 6221 Query 251 GCCTTGATAAC-TTCAGCTACACTTTTA-CGCTGCA-ATGTTACAATATAAACCAGGTTT 307 ||||| | ||| ||||| | |||| |||| || |||||||| ||||||||||| || Sbjct 6220 GCCTTCA-AACCTTCAGATGTT-TTTTGGCGCT-CACATGTTACATTATAAACCAGGATT 6164 Query 308 AAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAAT-ACCGGA 365 || ||||||||||| | | || | ||||| || ||| ||| | ||||| | |||||| Sbjct 6163 AAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-AGACAAACTTACCGGA 6107 Query 366 GATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACTTTG 423 ||||| | | |||||| ||| |||| | | |||||| ||||||| |||| |||||||| Sbjct 6106 GATCTCCGT-AGAGGG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACAAGAGACTTTG 6052 Query 424 -AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCAACGGATTTTG 480 ||| |||| | | || ||||||| | |||| ||||| || |||| | | |||| || Sbjct 6051 GAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCTGCAGATTCTG 5995 Query 481 TACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgcagtttgt-ga 538 ||| || | || ||||| || || || | |||| ||||| || | | ||||| | Sbjct 5994 AACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCCT-TTTGTTGC 5937 Query 539 acctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgctttccctg-c 592 || || || ||||| || || || | | || ||| |||| | | ||| || | Sbjct 5936 TCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTGTTGCTCCAT--TTTGT-TGAC 5884 Query 593 t-gatgctgctgattttcctactgatgctgctgct-TCCAATGG-TGATTTTCCTCTTGC 649 | | ||||||||| |||||| ||| |||| |||| | ||| | | || | | | Sbjct 5883 TTGTTGCTGCTGACTTTCCTTTTGAGGCTGATGCTGT----TGGATAAGTTGA-T-T-G- 5832 Query 650 AGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTTTTCAAAG-AT 706 || | | ||||||| |||| ||||||| | || || |||||| || |||||| || | Sbjct 5831 AG-A-AC-TCTGAAGAGGAGTTTTCTGAAC-TGCTGAATCTGTGGTG-TTTTCATAGGAA 5777 Query 707 CACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAGTATGTCACAT 765 ||||||||| |||||||||||||| ||||| | |||||||||||||| ||||||||||| Sbjct 5776 -ACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGGTATGTCACAT 5719 Query 766 CCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACAAATATCTTT- 824 ||||||||||||||||||| || ||||| |||||||| | | |||| ||||||| |||| Sbjct 5718 CCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACAAATA-CTTTC 5660 Query 825 ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCTTGTGTCTGCC 882 ||||| | || ||||||||||||||||| |||||||| | ||| || ||| |||||||| Sbjct 5659 ACTGCAACAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CTTTTGTCTGCC 5602 Query 883 AACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTTGCATTTGTT- 940 |||||||||||||||||| ||| |||| || |||||||||||||||||||||| || || Sbjct 5601 AACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTTGCACTTATTT 5543 Query 941 C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTTAAT 990 | | |||||||||| ||||| ||||| ||||| || | | || || | | Sbjct 5542 CCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C-TTA-GT-A-T 5491 Query 991 AGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTTACCTGGGCTT 1048 || || | | | |||| | ||||||| |||||| |||| | |||||||| || Sbjct 5490 -GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTTACCTGTGC-- 5441 Query 1049 CAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCA 1107 |||||||||| | ||| || | ||| |||||| |||||||||||||| ||||||| || Sbjct 5440 -AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAACAGGCCAAGCT 5383 Query 1108 ATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAAT 1167 ||||| || |||||||||||||| || | ||||||| | || |||||||||||| || Sbjct 5382 ATCATCTGACCAACAGCTTTCTCCATAATTTCCATGTTAACTGCGGGTCTCCAAAGGTAT 5323 Query 1168 GCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAG 1227 ||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||| ||| Sbjct 5322 GCTTCTGGTACAATCGCAGTGTCAATCAATACTTTAACATCTGTAGGACCTAAGCGACT- 5264 Query 1228 TC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACAT 1285 || ||| |||| | ||| ||||||||||||| |||||||| ||||||||||| || ||| Sbjct 5263 TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCAACGGTTGCAT 5205 Query 1286 TAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTCACACTCTGT 1344 || |||||||||||| | | |||| ||| || ||||||||| || ||||||||||||| Sbjct 5204 CAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTTCACACTCTGT 5146 Query 1345 AAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATAAATCAAA-GC 1401 | || ||| | ||| | | ||||| | ||| || || | || | |||||| | Sbjct 5145 ATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAAGAGATCAAAAGT 5093 Query 1402 ATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTC 1461 ||| ||| ||||||||||||| ||||||||| ||||||| ||||||| |||||||||| Sbjct 5092 ATCAAATAAAAGTGACTTACTCTGGCAGCTGAGGTTTCACCAACTTCAGCTGATTGTCTC 5033 Query 1462 TGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TTA--TATAT-- 1500 | | || ||||||||| | |||| || || | || || | ||| | ||| Sbjct 5032 TAT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATTAGCTTTATGT 4975 Query 1501 A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCAT 1558 | || ||| ||||| || | |||||||| || || |||||||| ||||||| ||||| Sbjct 4974 ATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCTTGTAACTCAT 4917 Query 1559 TGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTG-TGCTTC 1617 ||||||||| |||||| || ||| |||| |||||||||||||||||| ||| | || Sbjct 4916 TGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACATTTGCTTTTT- 4858 Query 1618 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCA 1677 |||||||||||||||| |||||||| |||||||| | ||||| || || | ||||||| Sbjct 4857 ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCTTAGTCTACCA 4798 Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737 ||||||||||||||||| |||||||| |||||||||| ||||||||| || ||| |||| Sbjct 4797 GGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTTTGCTTCATTCGTCCCATTTGAT 4738 Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783 || | ||||| |||||||||| ||||||||||||| |||| ||| Sbjct 4737 TGAGGACCACTGCTAACAATCTCAACTGCCTTTTTCTGCAAAC-CAT 4692 > AT1G40109.1 | Symbols: | transposable element gene | chr1:15155045-15158202 FORWARD LENGTH=3158 Length=3158 Score = 1022 bits (553), Expect = 0.0 Identities = 1441/1847 (78%), Gaps = 152/1847 (8%) Strand=Plus/Minus Query 11 ACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATACTCGATT 70 |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 3151 ACCAACTTATCCTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCATATACTCGATT 3092 Query 71 TCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTA 130 ||||||||||||||||| |||||||||||||||| ||||||| ||| |||||||||||| Sbjct 3091 TCATCTGATGGCCTCCAGACTGCTGCATCATCTACATTCACTACATCTACCCAAACTCTA 3032 Query 131 GCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGCACA 190 |||||||| | |||| |||||||||||||||||| | |||||||| |||||||||| Sbjct 3031 GCTGCATTCTCTGCCAAACGAACATGGTGTACCTTTTGATCTGGGTCTATTGAATGCATT 2972 Query 191 CGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTGATTG 250 |||||| || |||||||| ||||||||||||| |||||||||||||| |||||||||| Sbjct 2971 CGTCCTACACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCACTTCTGATAA 2912 Query 251 GCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATAAACCAGGTTT 307 ||||| | ||| ||||| | |||| ||||| || ||||||| ||||||||||| || Sbjct 2911 GCCTTCA-AACCTTCAGATGTT-TTTTGGCGCTGACA-TGTTACATTATAAACCAGGATT 2855 Query 308 AAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAAT-ACCGGA 365 || ||||||||||| | | || | ||||| || ||| ||| | ||||| | |||||| Sbjct 2854 AAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-AGACAAACTTACCGGA 2798 Query 366 GATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACTTTG 423 ||||| | | |||||| ||| |||| | | |||||| ||||||| ||| |||||||| Sbjct 2797 GATCTCCAT-AGAGGG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACAGGAGACTTTG 2743 Query 424 -AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCAACGGATTTTG 480 ||| |||| | | || ||||||| | |||| ||||| || |||| | | |||| || Sbjct 2742 GAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCTGCAGATTCTG 2686 Query 481 TACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgcagtttgt-ga 538 ||| || | || ||||| || || || | |||| ||||| || | | ||||| | Sbjct 2685 AACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCCT-TTTGTTGC 2628 Query 539 acctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgctttccctg-c 592 || || || ||||| || || || | | || ||| |||| | | ||| || | Sbjct 2627 TCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTGTTGCTCCAT--TTTGT-TGAC 2575 Query 593 t-gatgctgctgattttcctactgatgctgctgct-TCCAATGG-TGATTTTCCTCTTGC 649 | | ||||||||| |||||| ||| |||| |||| | ||| | | || | | | Sbjct 2574 TTGCTGCTGCTGACTTTCCTTTTGAGGCTGATGCTGT----TGGATAAGTTGA-T-T-G- 2523 Query 650 AGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTTTTCAAAG-AT 706 || | || ||||||| |||| ||||||| | || || |||||| || |||||| || | Sbjct 2522 AG-A-AA-TCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGTGGTG-TTTTCATAGGAA 2468 Query 707 CACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAGTATGTCACAT 765 ||||||||| ||||||||||||| ||||| | |||||||||||||| ||||||||||| Sbjct 2467 -ACTTTGTGGGTAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGGTATGTCACAT 2410 Query 766 CCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACAAATATCTTT- 824 |||||||||| |||||||| || ||||| |||||||| | | |||| ||||||| |||| Sbjct 2409 CCATCGTTGGACTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACAAATA-CTTTC 2351 Query 825 ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCTTGTGTCTGCC 882 ||||| | || ||||||||||||||||| |||||||| | ||| || ||| |||||||| Sbjct 2350 ACTGCACCAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CTTTTGTCTGCC 2293 Query 883 AACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTTGCATTTGTT- 940 |||||||||||||||||| ||| |||| || |||||||||||||||||||||| ||||| Sbjct 2292 AACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTTGCACTTGTTT 2234 Query 941 C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTTAAT 990 | | |||||||||| ||||| ||||| ||||| || | | || || | | Sbjct 2233 CCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C-TTA-GT-A-T 2182 Query 991 AGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTTACCTGGGCTT 1048 || || | | | |||| | ||||||| |||||| |||| | |||||||| || Sbjct 2181 -GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTTACCTGTGC-- 2132 Query 1049 CAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCA 1107 |||||||||| | ||| || | ||| |||||| |||||||||||||| ||||||| || Sbjct 2131 -AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAACAGGCCAAGCT 2074 Query 1108 ATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAAT 1167 ||||| || |||||||||||||| || | ||||||| | || |||||||||||| || Sbjct 2073 ATCATCTGACCAACAGCTTTCTCCATAATTTCCATGTTAACTGCGGGTCTCCAAAGGTAT 2014 Query 1168 GCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAG 1227 |||||| || |||| |||||||||||||| ||||||||||| ||||| |||||| ||| Sbjct 2013 GCTTCTTGTACAATCGCAGTGTCAATCAATACTTTAACATCTGTAGGACCTAAGCGACT- 1955 Query 1228 TC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACAT 1285 || ||| |||| | ||| ||||||||||||| |||||||| ||||||||||| || ||| Sbjct 1954 TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCAACGGTTGCAT 1896 Query 1286 TAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTCACACTCTGT 1344 || |||||||||||| | | |||||||| || ||||||||| || ||||||||||||| Sbjct 1895 CAGTACCAGCCCAATCCA-TCAAGACACACTTAGGTTGTGATCCTTGGTTCACACTCTGT 1837 Query 1345 AAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATAAATCAAA-GC 1401 | || ||| | ||| | | ||| | | ||| || || | || | |||||| | Sbjct 1836 ATAAGGAATCAA-TAGGCTAT-TATTATCTAATT--AT--GT-ACCAAGAGATCAAAAGT 1784 Query 1402 ATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTC 1461 ||| ||| |||||||||||||| |||||||| ||||||| ||||||| |||||||||| Sbjct 1783 ATCAAATAAAAGTGACTTACTCTTACAGCTGAGGTTTCACCAACTTCAGCTGATTGTCTC 1724 Query 1462 TGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TTA--TATAT-- 1500 ||| || ||||||||| | |||| || || | || || | ||| | ||| Sbjct 1723 TGT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATTAGCTTTATGT 1666 Query 1501 A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCAT 1558 | || ||| ||||| || | |||||||| || || |||||||| ||||||| ||||| Sbjct 1665 ATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCTTGTAACTCAT 1608 Query 1559 TGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTG-TGCTTC 1617 ||||||||| |||||| || ||| |||| |||||||||||||||||| ||| | || Sbjct 1607 TGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACATTTGCTTTTT- 1549 Query 1618 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCA 1677 |||||||||||||||| |||||||| |||||||| | ||||| || || | ||||| | Sbjct 1548 ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCTTAGTCTACTA 1489 Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737 ||||||||||||||||| |||||||| |||||||||||||||||||| || ||| |||| Sbjct 1488 GGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGTCCCATTTGAT 1429 Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783 || | |||| |||||||||| ||||||||||||| |||| ||| Sbjct 1428 TGAGGACCACTACTAACAATCTCAGCTGCCTTTTTCTGCAAAC-CAT 1383 Score = 616 bits (333), Expect = 6e-175 Identities = 763/959 (80%), Gaps = 76/959 (8%) Strand=Plus/Minus Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGA 1908 ||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct 1200 ACTCACAATTTTTTCAGCCGCATTTGTATTCACTGGTGTTCCATCTTTCTTGGTCCGTGA 1141 Query 1909 CTTAACCCAAACCTTTAGGCGT-GTCACTTCAGAT-GGGTCTGCACTAGC-AGTTTTCT- 1964 ||||||||||||||||| || | |||||||||| | |||||||||||| | |||||||| Sbjct 1140 CTTAACCCAAACCTTTA-GCCTCGTCACTTCAG-TCGGGTCTGCACTA-CTAGTTTTCTG 1084 Query 1965 --AAACAAAAAATACACAAGTGTT--T-G-GA-CT---T-TGGGAAAA-GGCTGAGCAAT 2012 ||||| || || | ||| | || | | | || | | |||| | |||||| Sbjct 1083 AAAAACACAACATGC-CAA-TATTAGTAGCAAGCTAAGTGTTTTAAAATTTCAAAGCAAT 1026 Query 2013 ATGAACAATATAA-GT-GTA-GCA-AT---ATTACCATATCTTCTGCTAGTCTAACCATT 2065 | || || |||| | | ||| || ||||||||||||||||| |||||||||| | Sbjct 1025 A--AAAAACATAACCTAACAGGCACATAAGATTACCATATCTTCTGCAAGTCTAACCA-T 969 Query 2066 CCC-CTGCGACTACAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCT 2124 ||| ||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||| Sbjct 968 CCCTCTGCGACTACAAGTGTGAGGAATTTGGTTGCGCCTTCTCTCCTTGTAGCTATCGCT 909 Query 2125 TACAACCTAAC-A-GA-TG--AA-T-GTTAA-TTTCT--A-AGGAAAGATA--TAGATAA 2171 || |||||||| | || || || | | ||| ||||| | || ||| ||| ||| ||| Sbjct 908 TATAACCTAACAATGATTGTTAATTAG-TAACTTTCTACATAGTAAATATACTTAGTTAA 850 Query 2172 ATTTACAAATTCC-AAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTTCACAAATTT 2230 | |||| | || || |||||||||||||| |||||||||| |||||||||||| Sbjct 849 A---ACAACTCCCTCAA--CATACCTTAAATTCAGGGCTAGTTTTGCTCTTCACAAATTT 795 Query 2231 ACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATG-TTCATCCTCT-CTTGGTTAGTC 2288 | ||| ||||||||||||| ||||||||||| || | |||||||||| | ||||| ||| Sbjct 794 TCTCCACTCAAATGGAGAAACATTTTTAGGTCTCA-GATTCATCCTCTGC-TGGTTTGTC 737 Query 2289 TTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATC 2348 || |||||||||| || || |||||||||||||||||||| |||||||| |||||||| Sbjct 736 TTTGCTTCTCTAAACTTAGTTACTTGCCTTGATTTCCAGGATCTCCACAAACATCCCATT 677 Query 2349 TGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAA 2408 ||||||||||||| ||||||||| ||||| |||||||||||||||||||||| || |||| Sbjct 676 TGCTTAAGCACTGCAACCTTTTGATACTCCTCATCTAGTTCAAACCTTGCCTTCAATCAA 617 Query 2409 AAACA-AAACA--GCTAAGTAC--TCA-CA-CCAATATA-T--AATA-AACTTGTAAATT 2457 ||| ||| | | | | | | | | | || ||| | |||| || ||| | Sbjct 616 TTACAGAAAAAGTGATTATTGCTGTGATAAGGAAAGATAGTCAAATATTAC-AAAAAAAT 558 Query 2458 TTACAC--AAATCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATT 2515 | || || | |||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct 557 AAAAACTGAAGTGTTACCTCGACAGATTTCCAGAGAAGTGTCCTGATTTCTTCACCTATT 498 Query 2516 TTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGAT 2575 |||||||| |||||||||||||| || |||||||| | | |||||||||| |||||||| Sbjct 497 TTTGTCCAGCGATCAATTGTGATAGGGACGTGTTCACGGATCAATGCGCCTGCATATGAT 438 Query 2576 GCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTCTACTCTTACT 2635 |||| |||||||||||||||||||||||||||||||| | ||| |||| ||||| ||| Sbjct 437 GCTAACTTAACTGAGCCTTTACCAATAGGCTCTCCCATCATGGTGTACTCCACTCTCACT 378 Query 2636 CTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACG- 2694 |||| |||||||||||| |||||||| |||| |||||||||||| || || ||||| | Sbjct 377 CTGGCATTTGGATCCTTAGCAATATCTTTCATCCTAGTTGGTCCACGCTGCCTCTTG-GT 319 Query 2695 CTTTGGATCAGCA-CAATCATAATCCTC-AGATAATACAAGCTCTCCTTCAGCCTCTTC 2751 ||| || | | || | || | ||| || ||||||| ||||||| ||||||| ||||| Sbjct 318 CTTAGGTTGAACAGCT-TCTTCATC-TCCAGATAATTCAAGCTCGCCTTCAGGTTCTTC 262 > AT3G32950.1 | Symbols: | transposable element gene | chr3:13495365-13498632 REVERSE LENGTH=3268 Length=3268 Score = 1013 bits (548), Expect = 0.0 Identities = 1446/1857 (78%), Gaps = 152/1857 (8%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 ||| ||| | ||||||||||| ||||||||||||| | ||||||||||||||||||||| Sbjct 3268 TCAGTAGGTCACCAACTTATCTTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 3209 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120 |||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 3208 ATACTCAATTTCATCTGATGGCCTCCAGACTGCTGCATCATCTACATTCACTACATCTAC 3149 Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180 |||||||||||||||||| | ||||| ||||||||||||||||| | |||||||| || Sbjct 3148 CCAAACTCTAGCTGCATTCTCTCCCAAATGAACATGGTGTACCTTTTGATCTGGGTCTAT 3089 Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240 ||||||||| |||||| || |||||||| ||||||||||||| |||||||||||||| || Sbjct 3088 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCA 3029 Query 241 CTTCTGATTGGCCTTGATAA-CTTCAGCTACACTTTT-ACGCTGCA-ATGTTACAATATA 297 ||||||||| ||||| | || |||||| || |||| |||| | |||||||| |||| Sbjct 3028 CTTCTGATTAGCCTTCA-AACCTTCAGATA-TTTTTTGGCGCT-AACATGTTACATTATA 2972 Query 298 AACCAGG-TTTAATGCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAA 356 ||||||| || || ||||||||||| | | || |||||| || ||| ||| | |||| Sbjct 2971 AACCAGGATTAAACGCATGTAGAAATTTTATTAG--TCAATATGTCAAACCAA-AGACAA 2915 Query 357 A-ATACCGGAGATCTTC-TCAGAGGGAG-TTGTGAATCCAGC-AGCTGACTTTTCTTGAC 412 | |||||||||||| | | |||||| | ||||| || || | |||| ||||||| || Sbjct 2914 ACTTACCGGAGATCTCCGT-AGAGGG-GTTTGTG-AT---GCTAACTGAGTTTTCTTCAC 2861 Query 413 AAAAGACTTT-GAAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGC 469 | ||||||| |||| |||| | || | ||||||| | |||| ||||| || |||| | Sbjct 2860 AGGAGACTTTGGAACTACTGTTG--GTTG-CTTCTCACCAAGAGATTTTGCAATTGTTCC 2804 Query 470 AACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctg 528 | |||| || ||| || | || ||||| || || || | |||| ||||| || | Sbjct 2803 TGCAGATTCTGAACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACT--TT 2746 Query 529 cagtttg-tgaacctgatcctgctgctt-tc-cc-tgatg-ctgctgctgatgctgctgc 583 | |||| || || || || ||||| || || || | | || ||| | |||| | Sbjct 2745 CCTTTTGTTGCTCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTG-T--TGCTCC 2693 Query 584 -tttccctg-c-tgatgctgctgattttcctactgatgctgctgctTCCAATGG-TGATT 639 ||| || | || ||||||||| |||||| ||| |||| ||| | ||| | | Sbjct 2692 ATTTTGTTGACTTGCTGCTGCTGACTTTCCTTTTGAGGCTGATGC-T--GTTGGAT-AAG 2637 Query 640 TTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTG-ACATGTTGCATCTGTATG-GTT 697 || || | |||| ||||||| |||| |||||| || || || |||||| | ||| Sbjct 2636 TT--GATT---G-AGAACTCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGT-GGTGTT 2585 Query 698 TTCA-AAGATCACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAG 755 |||| | || ||||||||| |||||||||||||| ||||| | |||||||||||||| | Sbjct 2584 TTCATAGGA-AACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGG 2527 Query 756 TATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACA 815 ||||||||||||||||||||||||||||| || ||||| |||||||| | | |||| ||| Sbjct 2526 TATGTCACATCCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACA 2467 Query 816 AATATCTTT-ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCT 872 |||| |||| ||||| || || ||||||||||||||||| |||||||| | ||| || || Sbjct 2466 AATA-CTTTCACTGCAGCAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CT 2410 Query 873 TGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTT 931 | |||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||| Sbjct 2409 TTTGTCTGCCAACGTCCTTCTGCAACAATAACGTCAT-TGTAAGACAAATCCAGTAGTTT 2351 Query 932 GCATTTGTT-C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACA 980 ||| ||||| | | |||||||||| ||||| ||||| ||||| || | | Sbjct 2350 GCACTTGTTTCCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C- 2296 Query 981 TTGTGTTAATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTT 1038 || || | | || || | | | |||| | ||||||| |||||| |||| | ||| Sbjct 2295 TTA-GT-A-T-GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTT 2247 Query 1039 ACCTGGGCTTCAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGC 1097 ||||| || |||||| ||| | ||| || | ||| |||||| |||||||||||||| | Sbjct 2246 ACCTGTGC---AATGTCGTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAAC 2191 Query 1098 AGGCCATGCAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCT 1157 | |||| || ||||| || |||||| ||||||| || | ||||||| | || ||||| Sbjct 2190 AAGCCAAGCTATCATCTGACCAACAACTTTCTCCATAATTTCCATGTTAACTGCGGGTCT 2131 Query 1158 CCAAAGGAATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCC 1217 ||||||| ||||||||||| ||| |||||||||||||| ||||||||||| ||||| || Sbjct 2130 CCAAAGGTATGCTTCTGGTACAACCGCAGTGTCAATCAATACTTTAACATCTGTAGGACC 2071 Query 1218 TAAGGGACAGTC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCA 1275 |||| ||| || ||| |||| | ||| ||||||||||||| |||||||| ||||||||| Sbjct 2070 TAAGCGACT-TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCA 2013 Query 1276 ACTTTTACATTAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTT 1334 || || ||| || |||||||||||| | | |||| ||| || ||||||||| || ||| Sbjct 2012 ACGGTTGCATCAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTT 1954 Query 1335 CACACTCTGTAAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATA 1392 ||||||||||| || ||| | ||| | | ||||| | ||| || || | || | Sbjct 1953 CACACTCTGTATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAAGA 1901 Query 1393 AATCAAA-GCATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGG 1451 |||||| | ||| ||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct 1900 GATCAAAAGTATCAAATAAAAGTGACTTACTCTTGCAGCTGAGGTTTCACCAACTTCAGC 1841 Query 1452 TGATTGTCTCTGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TT 1494 ||||||||||||| || ||||||||| | |||| || || | || || | || Sbjct 1840 TGATTGTCTCTGT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATT 1783 Query 1495 A--TATAT--A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCT 1548 | | ||| | || ||| ||||| || | |||||||| || || |||||||| ||| Sbjct 1782 AGCTTTATGTATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCT 1725 Query 1549 TGTAGCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACAC 1608 |||| |||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct 1724 TGTAACTCATTGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACAT 1665 Query 1609 TTG-TGCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCT 1667 ||| | || |||||||||||||||| |||||||| |||||||| | ||||| || || Sbjct 1664 TTGCTTTTT-ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCT 1606 Query 1668 CATTCTACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGT 1727 | |||||||||||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 1605 TAGTCTACCAGGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGT 1546 Query 1728 TGCATGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783 ||| |||| || | |||| ||||||||| ||||||||||| | |||| ||| Sbjct 1545 CCCATTTGATTGAGGACCACTACTAACAATCTTAGCTGCCTTTTTCCGCAAAC-CAT 1490 > AT4G08060.1 | Symbols: | transposable element gene | chr4:4924776-4928259 REVERSE LENGTH=3484 Length=3484 Score = 990 bits (536), Expect = 0.0 Identities = 1442/1857 (78%), Gaps = 152/1857 (8%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 ||| ||| | |||| ||||||| ||||||||||||| | ||||||||||||||||||||| Sbjct 3484 TCAGTAGGTCACCATCTTATCCTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 3425 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 3424 ATACTCGATTTCATCTGATGGCCTCCAGACTGCTGCATCATCTACATTCACTACATCTAC 3365 Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180 |||||||||||||||||| | ||||| |||||||||||||||||| | |||||||| || Sbjct 3364 CCAAACTCTAGCTGCATTCTCTCCCAAACGAACATGGTGTACCTTTTGATCTGGGTCTAT 3305 Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240 ||||||||| |||||| || |||||||| ||||||||||||| |||||||||| ||| || Sbjct 3304 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTACCTTGCA 3245 Query 241 CTTCTGATTGGCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATA 297 ||| ||||| ||||| | ||| ||||| | |||| || || || |||| || |||| Sbjct 3244 CTTATGATTAGCCTTCA-AACCTTCAGATGTT-TTTTGGCGGTGACA-TGTTGCATTATA 3188 Query 298 AACCAGGTTTAAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAA 356 ||||||| |||| ||||||||||| | | || | ||||| || ||| ||| | |||| Sbjct 3187 AACCAGGATTAAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-AGACAA 3131 Query 357 AAT-ACCGGAGATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACA 413 | | ||||||||||| | | |||||| ||| |||| | | |||||| ||||||| ||| Sbjct 3130 ACTTACCGGAGATCTCCGT-AGAGGG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACA 3076 Query 414 AAAGACTTTG-AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCA 470 |||||||| ||| |||| | | || ||||||| | |||| ||||| || |||| | Sbjct 3075 GGAGACTTTGGAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCT 3019 Query 471 ACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgc 529 | |||| || ||| || | || ||||| || || || | |||| ||||| || | | Sbjct 3018 GCAGATTCTGAACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCC 2960 Query 530 agtttgt-gaacctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgc 583 ||||| | || || || ||||| || || || | | || ||| |||| | | Sbjct 2959 T-TTTGTTGCTCC--ATTTTGTTGCTTATCACCAAGA-GATTTCT-CTGTTGCTCCAT-- 2907 Query 584 tttccctg-ct-gatgctgctgattttcctactgatgctgctgctTCCAAT-GG-TGATT 639 ||| || || | ||||||||| |||||| ||| | |||| | || | || | | | Sbjct 2906 TTTGT-TGACTTGTTGCTGCTGACTTTCCTTTTGA-G--GCTGAT-CCTGTTGGATAAGT 2852 Query 640 TTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTT 697 | | | | || | | ||||||| |||| ||||||| | || || |||||| || || Sbjct 2851 TGA-T-T-G-AG-A-AC-TCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGTGGTG-TT 2801 Query 698 TTCAAAG-ATCACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAG 755 |||| || | ||||||||| |||||||||||||| ||||| | |||||||||||||| | Sbjct 2800 TTCATAGGAA-ACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGG 2743 Query 756 TATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACA 815 ||||||||||||||||||||||||||||| || ||||| |||||||| | | |||| ||| Sbjct 2742 TATGTCACATCCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACA 2683 Query 816 AATATCTTT-ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCT 872 |||| |||| ||||| || || ||||||||||||||||| |||||||| | ||| || || Sbjct 2682 AATA-CTTTCACTGCAGCAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CT 2626 Query 873 TGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTT 931 | |||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||| Sbjct 2625 TTTGTCTGCCAACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTT 2567 Query 932 GCATTTGTT-C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACA 980 || ||||| | | |||||||||| ||||| ||||| ||||| || | | Sbjct 2566 CCACTTGTTTCCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C- 2512 Query 981 TTGTGTTAATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTT 1038 || || | | || || | | | |||| | ||||||| |||||| |||| | ||| Sbjct 2511 TTA-GT-A-T-GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTT 2463 Query 1039 ACCTGGGCTTCAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGC 1097 ||||| || |||||||||| | ||| || | ||| |||||| |||||||||||||| | Sbjct 2462 ACCTGTGC---AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAAC 2407 Query 1098 AGGCCATGCAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCT 1157 |||||| || ||||| | |||||| ||||||| || | ||||||| | || ||||| Sbjct 2406 AGGCCAAGCTATCATCTAACCAACAACTTTCTCCATAATTTCCATGTTAACTGCGGGTCT 2347 Query 1158 CCAAAGGAATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCC 1217 ||||||| ||||||||||| |||| |||||||||||||| |||||||||| ||||| || Sbjct 2346 CCAAAGGTATGCTTCTGGTACAATCGCAGTGTCAATCAATACTTTAACATTTGTAGGACC 2287 Query 1218 TAAGGGACAGTC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCA 1275 |||| ||| || ||| |||| | ||| ||||||||||||| |||||||| ||||||||| Sbjct 2286 TAAGCGACT-TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCA 2229 Query 1276 ACTTTTACATTAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTT 1334 || || ||| || |||||||||||| | | |||| ||| || ||||||||| || || Sbjct 2228 ACGGTTGCATCAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTC 2170 Query 1335 CACACTCTGTAAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATA 1392 ||||||||||| || ||| | ||| | | ||||| | ||| || || | || | Sbjct 2169 CACACTCTGTATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAAGA 2117 Query 1393 AATCAAA-GCATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGG 1451 |||||| | ||| ||| |||||| |||||||||||||||| ||||||| ||||||| Sbjct 2116 GATCAAAAGTATCAAATAAAAGTGACCTACTCTTGCAGCTGAGGTTTCACCAACTTCAGC 2057 Query 1452 TGATTGTCTCTGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TT 1494 ||||||||| ||| || ||||||||| | |||| || || | || || | || Sbjct 2056 TGATTGTCTTTGT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATT 1999 Query 1495 A--TATATAAATA-GTTAA---GTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCT 1548 | | ||| ||| || || ||| || | |||||||| || || |||||||| ||| Sbjct 1998 AGCTTTATGTATAAGTAAACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCT 1941 Query 1549 TGTAGCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACAC 1608 |||| |||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct 1940 TGTAACTCATTGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACAT 1881 Query 1609 TTG-TGCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCT 1667 ||| | || |||||||||||||||| |||||||| |||||||| | ||||| || || Sbjct 1880 TTGCTTTTT-ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCT 1822 Query 1668 CATTCTACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGT 1727 | ||||||| |||||||||||||||| |||||||| |||||||||||||||||||| || Sbjct 1821 TAGTCTACCACGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGT 1762 Query 1728 TGCATGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783 ||| |||| || | ||||| |||||||||| ||||||||||||| |||| ||| Sbjct 1761 CCCATTTGATTGAGGACCACTGCTAACAATCTCAGCTGCCTTTTTCTGCAAAC-CAT 1706 Score = 536 bits (290), Expect = 5e-151 Identities = 707/895 (79%), Gaps = 81/895 (9%) Strand=Plus/Minus Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGA 1908 ||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || ||||| Sbjct 1523 ACTCACAATTTTTTCAGCCGCATTTGTATTCACTGGTGTTCCATCTTTCTTGGTCCGTGA 1464 Query 1909 CTTAACCCAAACCTTTAGGCGT-GTCACTTCAGATGGGTCTGCACTAGCAGTTTTCT--- 1964 ||||||||||||||||| || | |||||||||| |||||||||| || ||||||||| Sbjct 1463 CTTAACCCAAACCTTTA-GCCTCGTCACTTCAGTTGGGTCTGCATTACCAGTTTTCTGAA 1405 Query 1965 AAACAAAAAATACACAAGTGTT--T-G-GA-CT---T-TGGGAAAA-GGCTGAGCAATAT 2014 ||||| || || | ||| | || | | | || | | |||| | ||||||| Sbjct 1404 AAACACAACATGC-CAA-TATTAGTAGCAAGCTAAGTGTTTTAAAATTTCAAAGCAATA- 1348 Query 2015 GAACAATATAA-GT-GTA-GCA-AT---ATTACCATATCTTCTGCTAGTCTAACCATTCC 2067 || || |||| | | ||| || ||||||||||||||||| |||||||||| ||| Sbjct 1347 -AAAAACATAACCTAACAGGCACATAAGATTACCATATCTTCTGCAAGTCTAACCA-TCC 1290 Query 2068 C-CTGCGACTACAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTA 2126 | ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct 1289 CTCTGCGACTACAAGTGTGAGGAATCTGGTTGCGCCTTCTCTCCTTGTAGCTATCGCTTA 1230 Query 2127 CAACCTAAC-A-GA-TG--AA-T-GTTAA-TTTCT--A-AGGAAAGATA--TAGATAAAT 2173 |||||||| | || || || | | ||| ||||| | || ||| ||| ||| |||| Sbjct 1229 TAACCTAACAATGATTGTTAATTAG-TAACTTTCTACATAGTAAATATACTTAGTTAAA- 1172 Query 2174 TTACAAATTCC-AAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTTCACAAATTTAC 2232 |||| | || || |||||||||||||| |||||||||| |||||||||||| | Sbjct 1171 --ACAACTCCCTCAA--CATACCTTAAATTCAGGGCTAGTTTTGCTCTTCACAAATTTTC 1116 Query 2233 GCCAATCAAATGGAGAAATATTTTTAGGTCGCATG-TTCATCCTCT-CTTGGTTAGTCTT 2290 || | | | | | ||||||||| || | |||||||||| | ||||| ||||| Sbjct 1115 TCC-A-C---T-G-G------TTTTAGGTCTCA-GATTCATCCTCTGC-TGGTTTGTCTT 1071 Query 2291 AGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATCTG 2350 |||||||||| || || |||||||||||||||||||| |||||||| |||||||| || Sbjct 1070 TGCTTCTCTAAACTTAGTTACTTGCCTTGATTTCCAGGATCTCCACAAACATCCCATTTG 1011 Query 2351 CTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAAAA 2410 ||||||||||| ||||||||| ||||| |||||||||||||||||||||| || |||| Sbjct 1010 CTTAAGCACTGCAACCTTTTGATACTCCTCATCTAGTTCAAACCTTGCCTTCAATCAATT 951 Query 2411 ACA-AAACA--GCTAAGTAC--TCA-CACCAATATATAAT-AAA-CTT-GTAAATTTTAC 2461 ||| ||| | | | | | | | | | || | ||| | ||| || ||| || Sbjct 950 ACAGAAAAAGTGATTATTGCTGTGATAAGGAA-AGATAGTCAAATATTACAAAAAAATAA 892 Query 2462 ACA---AA-TCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATTTT 2517 | | || | |||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 891 AAAGTGAAGTGTTACCTGGACAGATTTCCAGAGAAGTGTCCTGATTTCTTCACCTATTTT 832 Query 2518 TGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGATGC 2577 |||||| |||||||||||||| || |||||||| | | |||||||||| ||||| |||| Sbjct 831 TGTCCAGCGATCAATTGTGATAGGGACGTGTTCACGGATCAATGCGCCTGCATATAATGC 772 Query 2578 TAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTG-AACTCTACTCTTACTC 2636 || |||||||||||||||||||||||||||||||| | ||| || || ||||| |||| Sbjct 771 TAACTTAACTGAGCCTTTACCAATAGGCTCTCCCATCATGGTGTAA-TCCACTCTCACTC 713 Query 2637 TGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTT 2691 ||| |||||||||||| |||||||| |||| |||||||||||| || || ||||| Sbjct 712 TGGCATTTGGATCCTTAGCAATATCTTTCATCCTAGTTGGTCCACGCTGCCTCTT 658 > AT1G36630.1 | Symbols: | transposable element gene | chr1:13840145-13847625 REVERSE LENGTH=7481 Length=7481 Score = 531 bits (287), Expect = 2e-149 Identities = 733/937 (78%), Gaps = 75/937 (8%) Strand=Plus/Minus Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTAC-GTG 1907 ||||||||| |||||||| |||||||||||||||||||| ||||||||||| || | ||| Sbjct 3922 ACTCACAAT-TTTTCAGCCGCATTCGTATTCACTGGTGTTCCATCTTTCTTGGT-CTGTG 3865 Query 1908 ACTTAACCCAAACCTTTAGGCGT-GTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAA 1966 |||||||||| ||| ||| || | |||||||||| |||||| |||||| ||||||||| | Sbjct 3864 ACTTAACCCAGACCATTA-GCCTCGTCACTTCAGCTGGGTCCGCACTACCAGTTTTCTGA 3806 Query 1967 ACAA-A-AA-AT-ACACAAGT-GTTTG-GACTTTGGGAAAAGGCTGAGCAATATGAACAA 2020 |||| | || || ||| | | | | | | ||| |||| || | || | ||| Sbjct 3805 ACAACACAACATGCCACTATTAG-TAGTAAGTTTAATAAAA-ACT---C--TA--AGCAA 3755 Query 2021 TATAAGTGTAGCAATATTACCATATCTTCTGCTAGTC-TAACCATTCCC-CTGCGACTAC 2078 || || | || | || || ||||||| |||| | |||||| |||| ||||||||| Sbjct 3754 TA-AA----A--AACA-TAACA-ATCTTCTACTAG-CTTAACCA-TCCCTTTGCGACTAC 3706 Query 2079 AAGTGTGTGGAA-TCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 2137 |||| || ||| || | ||||||||||||||||||||| ||||||||| ||||||| | Sbjct 3705 AAGTATGAAGAATTC-GGTTGCGCCTTCTTTCCTTGTAGTTATCGCTTATAACCTAA-AA 3648 Query 2138 ATGAATGTTAATTTCTAA--GGAAAGAT-ATAGATAAA-TT--TACAAATTCCAAATGCA 2191 |||| |||||||| ||| | || ||| ||||| || | ||| ||| || Sbjct 3647 ATGATTGTTAATTAGTAACTTTCTATATAATAAATAAACTTAGTTTTTTTTCTAAAAACA 3588 Query 2192 TACCTTAAATTCTTTGCT-AGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAA 2250 ||||||| |||| ||| | ||||| |||||| ||||| | ||| ||||||||||||| Sbjct 3587 TACCTTACATTCAGGGCTCA-TTTTGCTCTTCACGAATTTTCTCCACTCAAATGGAGAAA 3529 Query 2251 TATTTTTAGGTCGCATGTTCATCCTCT-CTTGGTTAGTCTTAGCTTCTCTAATGTTTG-T 2308 |||||||||||||| |||||||||| | ||||| ||||| |||||||||| ||| | Sbjct 3528 CATTTTTAGGTCGCACATTCATCCTCTGC-TGGTTTGTCTTTGCTTCTCTAA-ACTTGAT 3471 Query 2309 AACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTT 2368 |||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 3470 TACTTGCCTAGATTTCCAGGACCTCCACAAACATCCCATCTGCTTAAGCACTGCAACCTT 3411 Query 2369 TTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACA-AAACAGCTAAG-TA 2426 ||| ||||| |||||||||||||||||||||| || |||| ||| ||| | ||| | Sbjct 3410 TTGATACTCCTCATCTAGTTCAAACCTTGCCTTCAATCAATTACAGAAA-A--AAAGAGA 3354 Query 2427 CTCACACCAATATATAA-TA-A-ACTTGT-AAATTTTACACAAATCTTACCTGGACAGAT 2482 | | | | | |||| | | | | || |||| ||||| ||| | | || || | Sbjct 3353 TTGATA-TAGT-GATAAGGACAGA-TAGTCAAATATTACA-AAAAAAGA-GT-GA-AG-T 3302 Query 2483 TTCCAGAGAACTGTCCTGACT-TCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGG 2541 ||||||||| |||||||| | ||||||||| |||||||||| |||||||||||||| || Sbjct 3301 GTCCAGAGAAGTGTCCTGA-TATCTTCACCTGTTTTTGTCCAGCGATCAATTGTGATAGG 3243 Query 2542 AACGTGTTCTCTTACCAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAAT 2601 |||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 3242 GACGTGTTCTCGGACCAATGCGCCTGCATATGATGCTAACTTAACTGAGCCTTTACCAAT 3183 Query 2602 AGGCTCTCCCATGTTAGTGA-ACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATAT 2660 |||||||||||| | || | |||| || || ||||| | |||||||||||| ||||||| Sbjct 3182 AGGCTCTCCCATCATGGT-ATACTCCACGCTGACTCTTGCATTTGGATCCTTAGCAATAT 3124 Query 2661 CCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACG-CTTTGGATCAGCA-CAATCATAATC 2718 | |||| |||||||||||| || || ||||| | ||| || | | | || || | ||| Sbjct 3123 CTTTCATCCTAGTTGGTCCACGTTGCCTCTTG-GTCTTAGGTTGAACTGCA-TCTTCATC 3066 Query 2719 CTC-AGATAATACAAGCTCTCCTTCAGCCTCTTCCAC 2754 || ||||||| ||||||| ||||||| |||||||| Sbjct 3065 -TCCAGATAATTCAAGCTCGCCTTCAGGTTCTTCCAC 3030 Score = 396 bits (214), Expect = 8e-109 Identities = 441/548 (80%), Gaps = 25/548 (5%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 ||| ||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct 7481 TCAGTAGATCTCCAACTTATTCATTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 7422 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120 |||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| | Sbjct 7421 ATACTCGATTTCATTTGATGGCCTCCAAACTGCTGCATCATCTACATTAACTACATCTAT 7362 Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180 |||||||||||||||||| ||||||||||||||||||| |||||| | ||| ||||||| Sbjct 7361 CCAAACTCTAGCTGCATTCTCCCCCAAGCGAACATGGTGCACCTTTTGATCTTGGTCGAT 7302 Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240 ||||||||| |||||| || |||||||| ||||||||||||| |||||||||||||| || Sbjct 7301 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCA 7242 Query 241 CTTCTGATTGGCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATA 297 ||||||||| ||||| | | | ||||| | | |||| ||||| || ||||||| |||| Sbjct 7241 CTTCTGATTAGCCTTCA-ATCCTTCAGATGCT-TTTTGGCGCTGACA-TGTTACATTATA 7185 Query 298 AACCAGGTTTAAT-GCATGTAGAAAAATA-ACCAGATTCAATAGGTAAAAAC-AATAAAC 354 ||||| | |||| | ||||| |||| | | ||| |||||| || ||| | || |||| Sbjct 7184 AACCAAGATTAAACGGATGTA-AAAATTTTATTAGAGTCAATATGTCAAA-CTAACAAAC 7127 Query 355 AAAAT-ACCGGAGATCTTCTCAGAGGG-AGTTGTGAATCC-AGCAGCTGACTTTTCTTGA 411 ||| | || |||||||| | ||||||| | |||||| | | || | ||| |||||| | Sbjct 7126 AAACTTACAGGAGATCTCCGCAGAGGGGA-TTGTGA-TGCTAG-A--TGAGATTTCTTCA 7072 Query 412 CAAAAGACTTTG-AACCTG-TAGCTG-TGGACTTCTCAGCTAGAGCTTTTGAAACTGTTG 468 || |||||||| ||| | | |||| | | ||||||| | |||| || || || |||| Sbjct 7071 CAGGAGACTTTGGAAC-TACT-GCTGGTTG-CTTCTCACCAAGAGATTATGCAATTGTTC 7015 Query 469 CAACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctg 528 | | |||| || |||||| | || ||||| || || || | |||||||||| ||||| Sbjct 7014 CTGCAGATTCTGAACCTTTGGCTGCAGATACCTTAATAGAAGAATTATAACCTGATGCTG 6955 Query 529 cagtttgt 536 | ||||| Sbjct 6954 CCTTTTGT 6947 Score = 254 bits (137), Expect = 5e-66 Identities = 242/293 (83%), Gaps = 6/293 (2%) Strand=Plus/Minus Query 1493 TTATATATAAATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTA 1552 |||| ||||||||| |||||| | ||||||||||| ||||| ||||| || ||||||| Sbjct 4353 TTATGTATAAATAGATAAGTG--TTTACCTGGTTCTTTATTTTGTCAATCACTTCTTGTA 4296 Query 1553 GCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGT 1612 |||| ||||||||| ||||||| | ||| |||| |||||||||||||||| | |||| Sbjct 4295 ACTCAGTGACCTTCTACTGGAGAGGGTCCTGCTTCTATTGCATTTCAGCCATATATTTGT 4236 Query 1613 GCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTC 1672 || |||||||||||||||| ||||| || |||||||| | ||||| || |||| || Sbjct 4235 TTTTTACTTGGAAACAAGCTAGTTTGGTTTTGTTCATATTTCTTCCCATCGCCCTCAGTC 4176 Query 1673 TACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGC-A 1731 | ||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct 4175 TCCCAGGATTGTCAGGCCCTAACAGTTGGCTAAGTGAATCTTGTGCTTCATTC-TTCCCA 4117 Query 1732 TGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAAC-TCA 1782 | |||| || | ||||| |||||||||| |||||||||| || |||| ||| Sbjct 4116 TTTGATTGAGGACCACTGCTAACAATCTCAGCTGCCTTTTTTTGCAAACATCA 4064 > AT1G41930.1 | Symbols: | transposable element gene | chr1:15685411-15695693 FORWARD LENGTH=10283 Length=10283 Score = 525 bits (284), Expect = 1e-147 Identities = 1140/1531 (74%), Gaps = 147/1531 (10%) Strand=Plus/Minus Query 666 GGAGATTTCTGACATGTTGCATCTGTATG-GTTTTCAAAGATC-ACTTTGTGGACAGGCC 723 ||||||| ||||| |||||||||| | || ||||||||||| | ||||||| ||||||| Sbjct 1613 GGAGATTCCTGACCTGTTGCATCT-TTTGTGTTTTCAAAGA-CAACTTTGTTCACAGGCC 1556 Query 724 ATGCTACATAAGACATTAAACAGTCCTCAAAGTATGTCACATCCATCGTTGGCCTCCATA 783 ||| |||| |||| | || ||| ||||||| |||||| ||||| || || || |||| | Sbjct 1555 ATGATACAAAAGATAATAGACAATCCTCAAGGTATGTTACATCAATAGTAGGTGTCCAGA 1496 Query 784 TAAAAGTCTCTGGTTGAAGAACTGCATCGACAAATATCTTTACTGC-TGCTGGCCCGAGA 842 |||| || || |||||| | || |||| ||||||||||| ||||| | ||| | |||| Sbjct 1495 TAAATGTATCAGGTTGATGTACCACATCTACAAATATCTTCACTGCAT-TTGGTCTGAGA 1437 Query 843 GGAAGCCCATTGACTAATGCGT-T-GTGTTCTTGTGTCTGCCAACGTCCTTCTGCAACAA 900 || | |||||| ||||| | || | | ||||||||||||||||||| ||| |||||| Sbjct 1436 GGTATCCCATTTACTAA-G-GTATCACGATCTTGTGTCTGCCAACGTCTTTCAGCAACAT 1379 Query 901 CAACCTCATCTGAAGACAAATCCAGTAGTTTGCATTTGTTCACTTGGTCCCT-A-T-CAA 957 | || ||||||||||||||||||||||| ||||||||||||| | | | | | | | Sbjct 1378 CCACGTCATCTGAAGACAAATCCAGTAGCTTGCATTTGTTCA-TCGCTGAATAAGTCCTT 1320 Query 958 AAACATTG--AAACCCAAAAATACATTGTGTTAATAGAAGAT-CAT-TATTCTA-TA-TA 1011 | ||| |||| || ||| | ||||||| | | ||| ||| | | || || Sbjct 1319 TGGCTTTGTCAAACACATTCATAGAACATGTTAAT---ACTTCCATATATAC-ATTATTA 1264 Query 1012 TGAGT-ATG-AGAATGAATAATAAACTTTACCTGGGCTTCAATGTCTTCTTGTTGGAGAT 1069 | | | ||| || |||||| ||||||||||||| || |||||||| || |||| | | Sbjct 1263 T-ACTCATGAAG-ATGAATCATAAACTTTACCTCTTCTGCAATGTCTCCTGGTTGTTGCT 1206 Query 1070 CCTCT-TCTAGGTTAACACACATAGCA-GCAGGCCATGCAATCATATGT-CC---AACAG 1123 | | | | |||||||||| || ||| | |||||||| |||||||| | | || ||||| Sbjct 1205 CATATAT-TAGGTTAACATACTTAG-AGGCAGGCCACGCAATCATCT-TACCGATAACAG 1149 Query 1124 CTTTCTCAATGGTGAACATGTT-AGCCGCAGGTCTCCAAAGGA-ATGCT-TCTGGTTCAA 1180 | ||||| ||| | ||||| || | |||||||||||| || ||| | |||||| | | Sbjct 1148 --AT-TCAATTGTGCATATGTTAAG-CACAGGTCTCCAAA-GATATG-TGTCTGGTACCA 1095 Query 1181 TAGCAGTGTCAATCAAGACTTTAACATCCGTA-GGGCCTAAGGGACAGTCATTAACTAAT 1239 |||||||||||| ||| ||||| ||||| | | |||||||| |||| ||||| ||||| Sbjct 1094 TAGCAGTGTCAACCAACACTTTGACATCAG-ATGGGCCTAACCGACAATCATTCACTAAG 1036 Query 1240 TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATTA-GA--ACCAGCC 1296 ||| | |||||||||| || |||| |||||| |||| || ||| | | ||||| | Sbjct 1035 TCATCTGGATCAGAAGTTATTATACGCCCCTCAACAACAGTTGCATCACCATTACCAGTC 976 Query 1297 CAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTCACACTCTGTAAAAACAATAG 1355 ||||||| | |||| ||| || ||||||||| ||||||| || |||| ||||| |||| Sbjct 975 CAATCAA-TCAAGATACACTTAGGTTGTGATCTTTTGTTAACGCTCTATAAAATTAATA- 918 Query 1356 GTAGACAAAATA-TCAGGTGATTGTATCTGTTAGAATAAATCAAAGCATCTGATAT-GAG 1413 |||| || || | ||| ||| || | |||||| | | | || |||||| | Sbjct 917 -AAGACTAATTACTAAGG-CATT-CCTCAAACA-AATAAAAC-ATGGATTTGATATCAAT 863 Query 1414 T---GACTTACTCTTGCAGCTGAGTTTTCACCTA-CTTCAGG-TGATTGTCTCTGTTACa 1468 | ||||||||| |||||||||||| | | | | ||||| | ||||||||||||||| Sbjct 862 TACAAACTTACTCTAGCAGCTGAGTTTGAAGC-AGCATCAGGCT-ATTGTCTCTGTTACA 805 Query 1469 aaaaaaaaGAAAAG--AAGTCAAATGTTAT-AT--AT-AA---ATAGT-TAAGT---GCA 1515 |||| ||| |||| || || | |||||| || || || | ||| ||| | | | Sbjct 804 AAAATAAACCAAAGTCAAATCTAGTGTTATAATGCATCAAGTTAAAGTATAATTAAAGAA 745 Query 1516 ----CTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCATTGACCTTCT-TCT 1570 ||||| |||||||| ||||| |||||||||||||||| |||||||||||| | || Sbjct 744 GTGTCTAACTTGGTTCTTTATTTTGTCAATTACATCTTGTAACTCATTGACCTT-TAACT 686 Query 1571 GGAGATGAAGC-TGATTCT-CTTGCATTTCAGCCATACACTTGTGCTTCACTTGGAAACA 1628 ||||||| ||| || || | ||| | |||||||||||||||||| |||| ||||||||| Sbjct 685 GGAGATG-AGCTTGCTT-TGCTTCCGTTTCAGCCATACACTTGTTTTTCATTTGGAAACA 628 Query 1629 AGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCAGGATTGTCAGG 1688 ||||| |||||||||||||| || ||||||||||| ||||||| ||||||||||||||| Sbjct 627 TGCTAATTTGGTCTTATTCATGTTTCGACCCATTGCCCTCATTCGACCAGGATTGTCAGG 568 Query 1689 CCCTAA-CAGTTGGCTTAGTGAATCTTGTG-CTTCATTTGTTGCATG-TGATGGATTATC 1745 || || |||||||| ||||||||||| | ||||| ||| | |||||| |||| Sbjct 567 TCC-AAGTAGTTGGCTAAGTGAATCTTG-GCCTTCAAAACAAGCA-GATGATGGCGTATC 511 Query 1746 ACTGTTAACAATCTCCT-CTGCCTTTTTCTGA--AACTCATAAGATACATATTAAAATAT 1802 ||| || ||||||| || ||||| | ||| | || | | ||||||| ||| | || | Sbjct 510 ACTTTTGACAATCT-CTGATGCCTCTCTCT-ATCAAGT-ACAAGATACGGATTCACATGT 454 Query 1803 CAAGTGTGATTCAAATGCCA-AAATGCAAATCATTAGAAGCAA-A----ATAACTCACAA 1856 | ||| || ||| | | |||| |||| | ||| | ||| | |||||||||| Sbjct 453 ----TATGA-TCTAATTCTAGCAATGAAAAT-AATAGTA-CAAGATCTTGTAACTCACAA 401 Query 1857 TCTTTTCAGCAGCATTCGTA-TTCACTGGTGTACCATC-TTTCTTAGTACGTGACTTAAC 1914 |||||||||| ||||| || |||||| |||||||||| |||| ||||||||||||| | Sbjct 400 TCTTTTCAGCCGCATT-TTATTTCACTAGTGTACCATCTTTTC-TAGTACGTGACTTGAT 343 Query 1915 CCAAACCTTTAGGCGTGTCACTTCAGA-TGGG-TCTGCACTAGCAGTTTTCT-A---A-A 1967 ||| |||| || | || || || | | |||| | || ||| | |||||| | | | Sbjct 342 CCACACCTGAAGCCTTGACA-TTTA-ACTGGGATTTGGACTCTCCTTTTTCTAATTCAGA 285 Query 1968 -C-AAAAAA-TACACAAGT-GTTTG-GACT-TTGGGAAA--AG-G-CTGAG---CAATAT 2014 | |||||| | |||| | | | | | | || ||| || | ||||| || || Sbjct 284 CCAAAAAAAGTTTACAAATAGCTAGTAAGTATT-CAAAAGTAGTGACTGAGTTTAAACAT 226 Query 2015 GAACAATATAAGTGTAGCAAT-ATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCG 2073 | || |||| ||||| || |||||||||||||||||||||||||||||||| || || Sbjct 225 G--TAACATAATTGTAG-TATGATTACCATATCTTCTGCTAGTCTAACCATTCCTCTACG 169 Query 2074 ACTACAAGTGTGTGGAATCTGATTGCGCCTT 2104 ||| ||||| |||||||| |||| |||| Sbjct 168 GCTAGTGGTGTGAGGAATCTGTTTGCTCCTT 138 Score = 202 bits (109), Expect = 2e-50 Identities = 198/240 (83%), Gaps = 10/240 (4%) Strand=Plus/Minus Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATT-TTCACTATATCCA 119 |||||||||||||||||||||||||||||| ||||| |||||| || ||||||||||| | Sbjct 2085 ATACTCGATTTCATCTGATGGCCTCCAAACCGCTGCGTCATCT-TTCTTCACTATATCAA 2027 Query 120 CCCAAACTCTAGCTGCAT-TAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCG 178 || | ||||||||||||| | | |||||||||||| || ||||| | ||| ||||| Sbjct 2026 CC-ATACTCTAGCTGCATGT-GAACCCAAGCGAACACATTGGACCTTAACTTCTAGGTCG 1969 Query 179 ATTGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTA 238 | ||||||||||||||||||||| || || |||||| |||||||||||||||| ||||| Sbjct 1968 AGTGAATGCACACGTCCTTCAGCGACAACTTGCTTCCTTCCACTAATATCCATCAACTTG 1909 Query 239 CACTTCTGATTGGCCTTGATAACTTCAGCTAC-ACTTTTACGCTG-CAATG-TTACAATA 295 || || | ||| | ||||| || | |||| | | |||||||||| || || ||| |||| Sbjct 1908 CATTTTTTATTTTCTTTGATGACCTAAGCTCCCA-TTTTACGCTGTCA-TGATTATAATA 1851 > AT1G42150.1 | Symbols: | transposable element gene | chr1:15742399-15746446 FORWARD LENGTH=4048 Length=4048 Score = 307 bits (166), Expect = 4e-82 Identities = 257/300 (86%), Gaps = 10/300 (3%) Strand=Plus/Minus Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60 |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 4048 TCAAAAGATGACCAACTTATCCATTGGCCATGCAATAGATGAACCAAGTGCATCTCTCAT 3989 Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATT-TTCACTATATCCA 119 ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| | Sbjct 3988 GTACTCGATTTCATCTGATGGCCTCCAAACTGCTGCGTCATC-ATTCTTCACTATATCAA 3930 Query 120 CCCAAACTCTAGCTGCAT-TAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCG 178 || | ||||||||||||| | | ||||||||||||| ||| ||||| | ||||||||| Sbjct 3929 CC-ATACTCTAGCTGCATCT-GAACCCAAGCGAACATAGTGGACCTTAACTTCTGGGTCG 3872 Query 179 ATTGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTA 238 | ||||||||||||||||| ||| || || |||||| |||||||||||||||| ||||| Sbjct 3871 AGTGAATGCACACGTCCTTTAGCGACAACTTGCTTCCTTCCACTAATATCCATCAACTTG 3812 Query 239 CACTTCTGATTGGCCTTGATAACTTCAGCTACACTTTT-ACGCTG-CAATG-TTACAATA 295 || || ||||| | ||| | || ||| || | ||||| |||||| || || ||| |||| Sbjct 3811 CATTTTTGATTTTCTTTGTTGACCTCAACT-CTCTTTTTACGCTGTCA-TGATTATAATA 3754 > AT5G28524.1 | Symbols: | transposable element gene | chr5:10508115-10508919 REVERSE LENGTH=805 Length=805 Score = 231 bits (125), Expect = 2e-59 Identities = 370/482 (77%), Gaps = 42/482 (9%) Strand=Plus/Minus Query 68 ATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACT 127 |||||||| |||||||||||||||||||||||||||| ||||||| ||| | ||||||| Sbjct 629 ATTTCATCAGATGGCCTCCAAACTGCTGCATCATCTACATTCACTACATCTATCCAAACT 570 Query 128 CTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGC 187 ||||| | | | | | |||||||||||| | ||||| |||||||||||| Sbjct 569 CTAGC-G-A--A-C----A--------TGGTGTACCTTTTGATCTGGATCGATTGAATGC 527 Query 188 ACACGTCCT-TCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTG 246 | |||||| | | |||||||| ||||||||||||| |||||||||||||| |||||||| Sbjct 526 ATTCGTCCTGT-ACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCACTTCTG 468 Query 247 ATTGGCCTT-GATAACTTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATAAACCAG 303 ||| ||||| || | |||||| | | |||| ||||| || | ||||| ||||||||| Sbjct 467 ATTAGCCTTCGA-ACCTTCAGATGCT-TTTTGGCGCTGTCA-TATTACATTATAAACCAA 411 Query 304 GTTTAAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAAT-AC 361 |||||| ||||||||||| ||| |||| || | | ||| ||| || |||| | || Sbjct 410 GTTTAAACGCATGTAGAAATTTAATTAGATGCAGTTTTTCAAACCAACAATCAAACTTAC 351 Query 362 CGGAGATCTTCT-CAGAGGG-AGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGAC 419 ||||||| ||| ||||||| | |||||| | | |||||| ||||||| |||| |||| Sbjct 350 CGGAGAT-TTCCGCAGAGGGGA-TTGTGA-TGCT--AGCTGAGTTTTCTTCACAAGAGAC 296 Query 420 TTTG-AACCTG-TAGCTG-TGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCAACGGAT 476 |||| ||| | | |||| | | ||||||| | |||| ||||| || |||||| ||||| Sbjct 295 TTTGGAAC-TACT-GCTGGTAG-CTTCTCACCAAGAGATTTTGCAATTGTTGCTGCGGAT 239 Query 477 TTTGTACCTTTTGTTGTAGATATC-TCAAGGGATGGCTTATAAcctgctgctgcagtttg 535 | || || ||| | || ||||| | | | || | |||||||||| |||||| |||| Sbjct 238 TCTGAACATTTGGCTGCAGATA-CATGTATAGAAGAATTATAACCTGATGCTGCCTTTTG 180 Query 536 tg 537 || Sbjct 179 TG 178 > AT5G32825.1 | Symbols: | transposable element gene | chr5:12353841-12360571 REVERSE LENGTH=6731 Length=6731 Score = 172 bits (93), Expect = 2e-41 Identities = 495/680 (73%), Gaps = 64/680 (9%) Strand=Plus/Minus Query 2033 AATATTACCA-TATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAGTGTGTGGAAT 2091 ||| |||||| | || || |||| |||||||||| | | || || |||||||| ||||| Sbjct 4871 AAT-TTACCAGT-TCCTCAGCTAATCTAACCATTTCTTTACGGCTGCAAGTGTGAGGAAT 4814 Query 2092 CTGATTGCGCCTTCTTTCCTTGTAGCT-ATCGCTTACAACCT-AACAGATGAAT-GTTAA 2148 |||| | || ||||| |||||||| | || || | ||||| || | |||| | ||| Sbjct 4813 CTGACTACGTCTTCTCTCCTTGTA-TTGTTCACTCAAAACCTAAATA-ATGACTAATTAG 4756 Query 2149 T-TTCTAAGGAAAGATATAGATAAATTTACAAAT-TCCA-AATGC--ATACCTTAAATTC 2203 | | | || | ||| ||||| |||| || | | | || || |||||| |||||| Sbjct 4755 TGTAC-AATCTGA-ATAGAGATATGTTTA-AATTGTTAAGAAAGCAAATACCTGAAATTC 4699 Query 2204 TTTG-CTAGTTTTGAGCTTCACAAATTTACGCCAATCA--AATGGAGAAATATT-TTTAG 2259 | | ||||||||||||||||||||||||||||| ||| ||| ||||||||| ||| | Sbjct 4698 -TGGACTAGTTTTGAGCTTCACAAATTTACGCCATTCAGCAAT--AGAAATATTCTTT-G 4643 Query 2260 GTCGCATG-TTCATCCTCTCTTG-GTTAGTCTTAGC-TTCT-CTA-ATGTTTGTAACT-T 2313 ||| || | |||||||||||| | |||| | ||| || | | | || | | | | Sbjct 4642 GTCTCA-GCTTCATCCTCTCT-GCGTTATTAGCAGCATTATTC-ACATCACGG-ACCAAT 4587 Query 2314 GCCTTGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGT 2373 | ||||||| |||| |||||||| |||||||| | ||| | || | |||| | | Sbjct 4586 -C-TTGATTTATAGGATCTCCACAAACATCCCATATTCTTGATAACAGCG-CCTTCTCAT 4530 Query 2374 ACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAAAA-ACA-AA-ACAGCTAAGTACTCA 2430 | ||| |||| |||||||||||| ||| || |||||| | | || |||| ||| | | | Sbjct 4529 ATTCTCCATCAAGTTCAAACCTTACCTACATTCAAAAGA-AGAAGACAG-TAAAT--T-A 4475 Query 2431 CACCAATATATAATA-A-ACT-TGTAAATTTTACACAAATC-TT-ACCTGGACAGATTTC 2485 ||||| | |||| | | || | ||||| | | ||| | || ||||| || |||||| Sbjct 4474 -ACCAA-A-ATAAGAGACACCATACAAATTA-A-AGAAA-CATTCACCTGAACTGATTTC 4421 Query 2486 CAGAGAACTGTCCTGA-CTTCTTCACCTATTTTTGTCCAA-CGATCAATTGTGATTGGAA 2543 || || || |||||| || ||||||| || || |||| | |||||||| | ||||| Sbjct 4420 CACAGGACAGTCCTGCGCT-CTTCACCAATCTTCCTCCAGTCC-TCAATTGTAACTGGAA 4363 Query 2544 CGTGTTCTCTTACCAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTT-TACCA-AT 2601 | ||||| |||||||| | |||| ||||||| ||| || ||||| ||| | ||| || Sbjct 4362 CATGTTCCCTTACCAAAGAACCTATGTATGATGATAGCTTCACTGATCCTGGT-CCACAT 4304 Query 2602 AGGCTCTCCCATGTTAGTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATC 2661 || ||||| | || |||||| || |||| || ||| | ||| ||||||||||| || || Sbjct 4303 -GGTTCTCCAAGGTCAGTGAAGTCAACTCGTATTCTAGAATTAGGATCCTTGGCGATGTC 4245 Query 2662 CTTCAGCCTAGTTGGTCCTC 2681 |||| | | |||||||||| Sbjct 4244 TTTCATCTTTGTTGGTCCTC 4225 > AT2G06902.1 | Symbols: | transposable element gene | chr2:2803448-2804634 FORWARD LENGTH=1187 Length=1187 Score = 139 bits (75), Expect = 2e-31 Identities = 175/221 (79%), Gaps = 16/221 (7%) Strand=Plus/Minus Query 2035 TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAG-TGTGTGGAATCT 2093 ||||||||||||||||||||||||||||||||| |||| ||| | | |||| ||||||| Sbjct 793 TATTACCATATCTTCTGCTAGTCTAACCATTCCTTTGCGGCTA-ATGGTGTGAGGAATCT 735 Query 2094 GATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAA-TG-TTAATT- 2150 | |||| |||||| ||||| || ||||| || ||||||||||||| ||| || || || Sbjct 734 GTTTGCTCCTTCTATCCTTATAACTATCACTAACAACCTAACAGA-GAAATGCTT--TTA 678 Query 2151 TCTAAGGA-A--AGATATAGA-TAAATTTACA-AATTCCAAATGCAT-ACCTTAAATTCT 2204 | |||| | | | ||||| | |||| ||| || | |||| | || | |||||| ||| Sbjct 677 TGTAAG-ATACTATATATAAAATAAACTTAGTTAAGTACAAAGG-ATTATCTTAAACTCT 620 Query 2205 TTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGG 2245 ||||||||||||| || || | ||| ||||| |||||||| Sbjct 619 TTGCTAGTTTTGATTTTGACTAGTTTTCGCCACTCAAATGG 579 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 165751579672 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5