BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484637 Length=1342 Score E Sequences producing significant alignments: (Bits) Value AT3G28630.1 | Symbols: | Protein of unknown function (DUF569) ... 1696 0.0 > AT3G28630.1 | Symbols: | Protein of unknown function (DUF569) | chr3:10728951-10730849 FORWARD LENGTH=1407 Length=1407 Score = 1696 bits (918), Expect = 0.0 Identities = 1107/1197 (92%), Gaps = 18/1197 (2%) Strand=Plus/Plus Query 1 AATAAGAAAACAAAGAAACCTCTTTTTTCTCTAATCCAAATCAAAGAAACTAAAAAAGGG 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 25 AATAAGAAAACAAAGAAACCTCTTTTTTCTCTAATCCAAATGAAAGAAACTAAAAAAGGG 84 Query 61 TTCCAAAGTACCTGAAATTTG-TTCGCATGAATGATCTTCAAT-CACATTGTTGAATGTA 118 ||| ||||||||||||| ||| ||| ||||||||||||||||| || || ||| | ||| Sbjct 85 TTCTAAAGTACCTGAAA-TTGTTTCACATGAATGATCTTCAATCCA-ATCCTTGGAGGTA 142 Query 119 AAATCGCGGCCCTGGCCATCGACAGATCCCTGTTTCAGATTTTTGT-GTTTTGATACAAC 177 ||||||| || |||||||| | ||||||||||||||||||||||| |||| |||||| Sbjct 143 AAATCGCAGCTGTGGCCATCAAAAGATCCCTGTTTCAGATTTTTGTAATTTT-ATACAAA 201 Query 178 AGAACAATAATGGAGATTTTCAAAAAGGCTGAAACCGTGCGTTTACGTAGCTACCACGAC 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 AGAACAATAATGGAGATTTTCAAAAAGGCTGAAACCGTGCGTTTACGTAGCTACCACGAC 261 Query 238 AAGTACCTTTTAGCAGAGGAGGACGAAGATTCCGTGAGCCAGGACAGAGATGGGCGGTCT 297 ||||| ||| ||||||||||||| ||||| |||||||||||||||||||| ||||||||| Sbjct 262 AAGTATCTTCTAGCAGAGGAGGATGAAGAATCCGTGAGCCAGGACAGAGACGGGCGGTCT 321 Query 298 ATGAACGCAAGATGGACGGTGGAGATTGTAGAAGTGACAAACGTGATCCGTCTTAAGAGC 357 |||||||||||||||||||||||| |||||||| | | | ||||| ||||| |||||| Sbjct 322 ATGAACGCAAGATGGACGGTGGAGGTTGTAGAAAAGGCGGATGTGATTCGTCTCAAGAGC 381 Query 358 TGCTTTGGCAAGTACCTAACCGCTTCAAACATCCCAATGTTCCTTGGCATGACCGGCAAG 417 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 382 TGCTTTGGCAAGTACCTAACCGCTTCAAACATCCCAATGTTCCTTGGGATGACTGGCAAG 441 Query 418 AAGGTAACGCAAACGCTGCCACG-ACGGCTAGATTCATCAACTGAATGGGAACCTGTTAG 476 | ||| || |||||||||||||| | ||||||| |||||||||||||||||||| ||||| Sbjct 442 AGGGTGACACAAACGCTGCCACGGA-GGCTAGACTCATCAACTGAATGGGAACCCGTTAG 500 Query 477 AGAAGGCGTTCAGGTTAGGCTTAAGACAAGGTATGGACAGTATCTCCGAGCTAATGGGGG 536 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 501 AGAAGGTGTTCAGGTTAGGCTCAAGACAAGGTATGGACAGTATCTCCGAGCTAATGGGGG 560 Query 537 TTTACCGCCATGGAGGAACTCGATTACACATGATATACCTCATAGGTCAACCACACAGGA 596 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 561 TTTACCGCCATGGAGGAATTCGATTACCCATGATATACCTCATAGGTCAACCACACAGGA 620 Query 597 CTGGGTTTTATGGGATGTTGATATTTTGGAAAGCAGAAAGAAGAAAGCACCCCCAGTGGC 656 ||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| Sbjct 621 TTGGGTTTTATGGGATATTGACATTCTGGAAAGCAGAAAGAAGAAAGCACCCCCAGTGGC 680 Query 657 TGAACCGGCTTATACGCCTCTCCCGCCTCCCCCACCACCACCAGAGCTTCTGCAGGAAAG 716 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||| Sbjct 681 TGAACCGGCTTATACGCCTCTCCCCCCTCCTCCACCACCACCAGAGCTTCTGCAAGTAAG 740 Query 717 AAAAGATGATCATCAAGAGCCCCATTCACCCAAAGGATTCTCTCTCAGGTCCCCAAGGTT 776 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 741 AAAAGATGATCATCAAGAGCCCAATTCACCCAAAGGATTCTCTCTCAGGTCCCCAAGGTT 800 Query 777 TTCCAAATTCGAGTCTGATGACAGTGTCAGCTCACCGGTCAAGGCAGATGGCAGGCTAAT 836 |||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 801 TTCCAAATCCGAGTCTGATGACACTGTCAGCTCACCAGTCAAGGCAGATGGCAGACTAAT 860 Query 837 TTATTATAGGATTGGGGACGAAGATGGGAATGTAGATGAAACAACAAAGGAAGAGCTTTT 896 ||||||| |||||||||||||||||||||| || ||||||||| |||||||||||||||| Sbjct 861 TTATTATCGGATTGGGGACGAAGATGGGAACGTGGATGAAACAGCAAAGGAAGAGCTTTT 920 Query 897 CTGCTTCAAGGGAATGGGACTAGAAGAGCTCAAAGAGAAGCTCAAAGAAGAGACAGGTCT 956 |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| Sbjct 921 CTGCTTCAAGGGAATGGGACTAGAAGAGCTGAAAGAGAAGCTTATAGAAGAGACAGGTCT 980 Query 957 AAGTGACATATCAATCTGTTCCAAAAACCCTTTAAACGGGAAATTATATCCCCTTCGGTT 1016 ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 981 GAGTGATATATCAATCTGTTCCAAAAACCCTTTAAACGGAAAATTATATCCCCTTCGGTT 1040 Query 1017 GCATCTCCCTCCCAACAACACAAAAATGCACGTTGTCTTGATCCCCTCGCCTTCAAAAGG 1076 ||||| ||||||||||||||||| ||||| || || |||||||| |||||||||||||| Sbjct 1041 ACATCTTCCTCCCAACAACACAAAGATGCATGTCGTATTGATCCCTTCGCCTTCAAAAGG 1100 Query 1077 GGATGCTGCAAGCACTTCTTGAAGACTTGAAGTATGGTTCAAAATTACAGAGACTGTGTT 1136 |||||||||||||||||||||||| | | | |||||||||||||||||||| |||| Sbjct 1101 GGATGCTGCAAGCACTTCTTGAAG--T--A--T--GGTTCAAAATTACAGAGACTCTGTT 1152 Query 1137 -ATCCAAGACCAAAAACTTATAGTTTCTGTTATTGTGTAATTTGGTAATACGTTGTA 1192 ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1153 TATCCAAGACCACAAACTTATAGTTTCTGT-ATTGTGTAATTTGGTAACACGTTGTA 1208 Score = 235 bits (127), Expect = 8e-61 Identities = 144/152 (95%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 1192 ATATGTGAAATGCTACCTAAGCAACTAAAACCCAATACTAAGCCAAACATGCAAGAAGAT 1251 |||||||||| |||||||| ||||||||||||||||||||| |||||||| |||||||| Sbjct 1257 ATATGTGAAACGCTACCTACGCAACTAAAACCCAATACTAA-CCAAACATTAAAGAAGAT 1315 Query 1252 ATTGTGTCGGGATTTCGTAAGACTTCCCATCAAGTTCTTGTCAATAAGCTTCTTTCAT-C 1310 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1316 ATTGTGTAGGGATTTCGTAAGACTTCCCATCAAGTTCTTGTCAATAAGCTTCTTTCATTC 1375 Query 1311 TTAGTGAGATGCTAATGAGAGCAAATCATATG 1342 |||||||||||||||||||||||||| ||||| Sbjct 1376 TTAGTGAGATGCTAATGAGAGCAAATTATATG 1407 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66063917220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5