BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484723
Length=933
Score E
Sequences producing significant alignments: (Bits) Value
AT5G57890.1 | Symbols: | Glutamine amidotransferase type 1 fam... 525 3e-148
AT1G25220.2 | Symbols: ASB1 | anthranilate synthase beta subuni... 496 2e-139
AT1G25155.1 | Symbols: | Glutamine amidotransferase type 1 fam... 496 2e-139
AT1G24909.1 | Symbols: | Glutamine amidotransferase type 1 fam... 496 2e-139
AT1G25083.1 | Symbols: | Glutamine amidotransferase type 1 fam... 496 2e-139
AT1G24807.1 | Symbols: | Glutamine amidotransferase type 1 fam... 409 3e-113
> AT5G57890.1 | Symbols: | Glutamine amidotransferase type 1 family
protein | chr5:23447407-23449679 REVERSE LENGTH=1120
Length=1120
Score = 525 bits (284), Expect = 3e-148
Identities = 375/418 (90%), Gaps = 10/418 (2%)
Strand=Plus/Plus
Query 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 539 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 598
Query 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610
||||||||||| || || ||||||||||| |||||||||| | | | | | ||
Sbjct 599 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCCAACCCT-TTCCT-TG-TAGGTA 655
Query 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670
||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 656 GATATCACAGTCTCGTGATCGAAAAAGATTCATTTCCTAGTGATGAACTCGAGGTTACAG 715
Query 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTATAGGCATATACAA 729
||||||||| ||||||||||||||||||| || |||||| | ||||| | |||||||||
Sbjct 716 CATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 774
Query 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTG-TCTGCAA 788
||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||
Sbjct 775 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACCGAAGGCAAGACAATTGTTC-GCAA 833
Query 789 TTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGACT-AGTCTGGATG 847
|||||||||||||||||||||||||||||||||||||||| ||||| || || ||| |||
Sbjct 834 TTTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGGCATAGGCTTAGCCTGAATG 893
Query 848 AGAAAATCAGCTGTGTTTGATTAGTTCCTCCCTGTAATAATGTCTGCCAATGCAAAAT 905
||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||
Sbjct 894 AGAAAATCAGCTGTGTTCGATTAGTGCTTCCCTGTAATAATGTCTGCCAATGCAAAAT 951
Score = 359 bits (194), Expect = 3e-98
Identities = 342/407 (84%), Gaps = 35/407 (9%)
Strand=Plus/Plus
Query 56 GAGTTTCGGTTTTGGGGAAGAGTCGTAGAGATGTCT-TTGCAAAAGATTCGATTGAAATG 114
|||||||||||||| ||||||||||||||||||| | |||| |||| |||||||||||||
Sbjct 164 GAGTTTCGGTTTTGTGGAAGAGTCGTAGAGATGT-TATTGCGAAAGCTTCGATTGAAATG 222
Query 115 GCGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCTATC 174
|||||||||||||||| | |||| ||| ||||||||| | || | |||| |||||
Sbjct 223 GCGGAATCGAATTCGATATCTTCCGTTGTTGTCAATT-C-CT---C----TGGTCCTATC 273
Query 175 ATCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCATAtttttttcaatttt 234
||||||||||||||||||||||||||| ||||||||||||||| | | |
Sbjct 274 ATCGTGATTGATAATTACGACAGCTTCACTTACAATCTCTGCC--A-----GT--A---- 320
Query 235 ttattttGTTTCG-GTCAAGGATGCCGA-TTTGAAGTTTACCGCAATTATGAACTTACAG 292
|| || | | | ||| |||| | |||||||||||||||||| ||||||||||||
Sbjct 321 -TA---TG-GGAGAG-CTAGGGTGCC-ATTTTGAAGTTTACCGCAATGATGAACTTACAG 373
Query 293 TAGAGGAGCTGAAAA-ATAAAAATCCAAGAGTAATGTTGATTTCTCCTGGACCTGGTACC 351
| ||||||||||||| | ||||| ||||||| | ||||||||||||||||||||||||||
Sbjct 374 TTGAGGAGCTGAAAAGA-AAAAAGCCAAGAGGATTGTTGATTTCTCCTGGACCTGGTACC 432
Query 352 CCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGAAACTTGGACCTCGTGTTTCTTTA 411
||||||||||||||||||| ||| ||||| |||||| |||| ||||| | |||| |||||
Sbjct 433 CCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGGAACTCGGACCACTTGTTCCTTTA 492
Query 412 TTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAGCATTTGGAGG 458
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 493 TTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAGCATTTGGAGG 539
> AT1G25220.2 | Symbols: ASB1 | anthranilate synthase beta subunit
1 | chr1:8836835-8839549 REVERSE LENGTH=1536
Length=1536
Score = 496 bits (268), Expect = 2e-139
Identities = 368/416 (88%), Gaps = 7/416 (2%)
Strand=Plus/Plus
Query 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 601 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 660
Query 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610
||||||||||| || || ||||||||||| ||||||| || | | || | | ||
Sbjct 661 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCAAACCCT-TTCAT-TG-TAGGTA 717
Query 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670
||||||||| ||||| |||||||||||| |||| ||||||| |||||||||||||||||
Sbjct 718 GATATCACAGTCTCGTGATCGAAAAAGATACATTTCCTAGTGATGAACTCGAGGTTACAG 777
Query 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATGAA-GTATAGGCATATACAA 729
||||||||| |||||||||||| |||||| || |||||| ||| ||| | |||||||||
Sbjct 778 CATGGACAGAAGATGGTCTGGTAATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 836
Query 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTGTCTGCAAT 789
||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 837 GGAGTCCAATTTCATCCGGAGAGTATTATAACAACTGAGGGCAAGACAATTGTCCGCAAT 896
Query 790 TTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGACTAGTCTGGATGAG 849
||||||||| | |||||||||||||| || |||||||||||||||||||| ||| |||||
Sbjct 897 TTCATCAAAATAGTAGAGAAAAAGGAGTCCGAGAAGCTGACATAGACTAGCCTGAATGAG 956
Query 850 AAAATCAGCTGTGTTTGATTAGTTCCTCCCTGTAATAATGTCTGCCAATGCAAAAT 905
||||||||||||||| || |||| ||||||||||||||| | ||||||||||||||
Sbjct 957 AAAATCAGCTGTGTTCGAATAGTGCCTCCCTGTAATAATATTTGCCAATGCAAAAT 1012
Score = 442 bits (239), Expect = 3e-123
Identities = 367/425 (86%), Gaps = 23/425 (5%)
Strand=Plus/Plus
Query 56 GAGTTTCGGTTTTGGGGAAGAGTCGTAGAGATGTCTTTGCAAAAGATTCGATTGAAATGG 115
||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 178 GAGTTTCCGTTTTGGGGAAGAGTCGTAGAGATGTCTTTGCGAAAGCTTCGATTGAAATGG 237
Query 116 CGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCTATCA 175
||||||||||||||| |||||| ||| |||||||||||||||||||| ||||| | ||||
Sbjct 238 CGGAATCGAATTCGATACCTTCCGTTGTTGTCAATTCCTCTAAGCAGCATGGTCCAATCA 297
Query 176 TCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCA-TAt--------ttttt 226
|||||||||||||||||||||||||| | |||||||||||||| ||| ||||
Sbjct 298 TCGTGATTGATAATTACGACAGCTTCACATACAATCTCTGCCAGTATAAACAAAATTTTG 357
Query 227 tcaatt-tt-t-tattt-t---GT-T-T-CG-G-TCAAGGATGCCGA-TTTGAAGTTTAC 273
|||| || | ||||| | || | | | | | |||||||| | ||||||||||||
Sbjct 358 AGAATTGTTATCTATTTCTACAGTATATGGGAGAGCTAGGATGCC-ATTTTGAAGTTTAC 416
Query 274 CGCAATTATGAACTTACAGTAGAGGAGCTGAAAAATAAAAATCCAAGAGTAATGTTGATT 333
|||||| |||||||||||||||| ||||||||||| ||||||||||||| ||||||||
Sbjct 417 CGCAATGATGAACTTACAGTAGAAGAGCTGAAAAAAAAAAATCCAAGAGGGGTGTTGATT 476
Query 334 TCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGAAACTT 393
||||| || |||||||||||||||||||||||||||| ||| ||||| |||||| ||||
Sbjct 477 TCTCCAGGGCCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGGAACTC 536
Query 394 GGACCTCGTGTTTCTTTATTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAGCATTT 453
||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 537 GGACCACTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAGCATTT 596
Query 454 GGAGG 458
|||||
Sbjct 597 GGAGG 601
Score = 91.6 bits (49), Expect = 1e-17
Identities = 53/55 (96%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 2 TGTCTTCTTCAACCCAAGTCTGGCTCCACCACTCACTGCCTAAACCCTTCTCTCG 56
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 99 TGTCTTCTTCAACCCAAGTCTGGCTCCACCACTCGCCGCCTAAACCCTTCTCTCG 153
> AT1G25155.1 | Symbols: | Glutamine amidotransferase type 1 family
protein | chr1:8822692-8824821 REVERSE LENGTH=1029
Length=1029
Score = 496 bits (268), Expect = 2e-139
Identities = 368/416 (88%), Gaps = 7/416 (2%)
Strand=Plus/Plus
Query 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 329 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 388
Query 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610
||||||||||| || || ||||||||||| ||||||| || | | || | | ||
Sbjct 389 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCAAACCCT-TTCAT-TG-TAGGTA 445
Query 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670
||||||||| ||||| |||||||||||| |||| ||||||| ||| |||||||||||||
Sbjct 446 GATATCACAGTCTCGTGATCGAAAAAGATACATTTCCTAGTGATGAGCTCGAGGTTACAG 505
Query 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTATAGGCATATACAA 729
||||||||| ||||||||||||||||||| || |||||| | ||||| | |||||||||
Sbjct 506 CATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 564
Query 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTGTCTGCAAT 789
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 565 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAGGGCAAGACAATTGTCCGCAAT 624
Query 790 TTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGACTAGTCTGGATGAG 849
||||||||| |||||||||||||||| || ||||||||||| |||||||| ||| |||||
Sbjct 625 TTCATCAAAATCGTAGAGAAAAAGGATTCCGAGAAGCTGACGTAGACTAGCCTGAATGAG 684
Query 850 AAAATCAGCTGTGTTTGATTAGTTCCTCCCTGTAATAATGTCTGCCAATGCAAAAT 905
|||||| |||||||| || |||| ||||||||||||||| | ||||||||||||||
Sbjct 685 AAAATCTGCTGTGTTCGAATAGTGCCTCCCTGTAATAATATTTGCCAATGCAAAAT 740
Score = 331 bits (179), Expect = 7e-90
Identities = 297/350 (85%), Gaps = 24/350 (7%)
Strand=Plus/Plus
Query 112 ATGGCGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCT 171
||||| ||||||||||||| |||||| ||| || ||||||||||||| ||||||||| ||
Sbjct 1 ATGGCAGAATCGAATTCGATACCTTCCGTTGTTATCAATTCCTCTAAACAGAATGGTCCT 60
Query 172 ATCATCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCATAtttttttcaat 231
|||||||||||||||||||||||||||||| ||||||||||||||| | | |
Sbjct 61 ATCATCGTGATTGATAATTACGACAGCTTCACTTACAATCTCTGCC--A-----GT--A- 110
Query 232 tttttattttGTTTCG-GTCAAGGATGCCGA-TTTGAAGTTTACCGCAATTATGAACTTA 289
|| || | | | | ||||| | |||||||||||||||||| |||||||||
Sbjct 111 ----TA---TG-GGAGAG-CTACAATGCC-ATTTTGAAGTTTACCGCAATGATGAACTTA 160
Query 290 CAGTAGAGGAGCTGAAAA-ATAAAAATCCAAGAGTAATGTTGATTTCTCCTGGACCTGGT 348
||||||| |||||||||| | ||||||||||||| | |||||||||||||||||||||||
Sbjct 161 CAGTAGAAGAGCTGAAAAGA-AAAAATCCAAGAGGAGTGTTGATTTCTCCTGGACCTGGT 219
Query 349 ACCCCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGAAACTTGGACCTCGTGTTTCT 408
|||||||||||||||||||||| ||| ||||| |||||| |||| ||||| | |||| ||
Sbjct 220 ACCCCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGGAACTCGGACCACTTGTTCCT 279
Query 409 TTATTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAGCATTTGGAGG 458
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 280 TTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAGCATTTGGAGG 329
> AT1G24909.1 | Symbols: | Glutamine amidotransferase type 1 family
protein | chr1:8785785-8787914 REVERSE LENGTH=1029
Length=1029
Score = 496 bits (268), Expect = 2e-139
Identities = 368/416 (88%), Gaps = 7/416 (2%)
Strand=Plus/Plus
Query 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 329 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 388
Query 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610
||||||||||| || || ||||||||||| ||||||| || | | || | | ||
Sbjct 389 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCAAACCCT-TTCAT-TG-TAGGTA 445
Query 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670
||||||||| ||||| |||||||||||| |||| ||||||| ||| |||||||||||||
Sbjct 446 GATATCACAGTCTCGTGATCGAAAAAGATACATTTCCTAGTGATGAGCTCGAGGTTACAG 505
Query 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTATAGGCATATACAA 729
||||||||| ||||||||||||||||||| || |||||| | ||||| | |||||||||
Sbjct 506 CATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 564
Query 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTGTCTGCAAT 789
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 565 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAGGGCAAGACAATTGTCCGCAAT 624
Query 790 TTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGACTAGTCTGGATGAG 849
||||||||| |||||||||||||||| || ||||||||||| |||||||| ||| |||||
Sbjct 625 TTCATCAAAATCGTAGAGAAAAAGGATTCCGAGAAGCTGACGTAGACTAGCCTGAATGAG 684
Query 850 AAAATCAGCTGTGTTTGATTAGTTCCTCCCTGTAATAATGTCTGCCAATGCAAAAT 905
|||||| |||||||| || |||| ||||||||||||||| | ||||||||||||||
Sbjct 685 AAAATCTGCTGTGTTCGAATAGTGCCTCCCTGTAATAATATTTGCCAATGCAAAAT 740
Score = 331 bits (179), Expect = 7e-90
Identities = 297/350 (85%), Gaps = 24/350 (7%)
Strand=Plus/Plus
Query 112 ATGGCGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCT 171
||||| ||||||||||||| |||||| ||| || ||||||||||||| ||||||||| ||
Sbjct 1 ATGGCAGAATCGAATTCGATACCTTCCGTTGTTATCAATTCCTCTAAACAGAATGGTCCT 60
Query 172 ATCATCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCATAtttttttcaat 231
|||||||||||||||||||||||||||||| ||||||||||||||| | | |
Sbjct 61 ATCATCGTGATTGATAATTACGACAGCTTCACTTACAATCTCTGCC--A-----GT--A- 110
Query 232 tttttattttGTTTCG-GTCAAGGATGCCGA-TTTGAAGTTTACCGCAATTATGAACTTA 289
|| || | | | | ||||| | |||||||||||||||||| |||||||||
Sbjct 111 ----TA---TG-GGAGAG-CTACAATGCC-ATTTTGAAGTTTACCGCAATGATGAACTTA 160
Query 290 CAGTAGAGGAGCTGAAAA-ATAAAAATCCAAGAGTAATGTTGATTTCTCCTGGACCTGGT 348
||||||| |||||||||| | ||||||||||||| | |||||||||||||||||||||||
Sbjct 161 CAGTAGAAGAGCTGAAAAGA-AAAAATCCAAGAGGAGTGTTGATTTCTCCTGGACCTGGT 219
Query 349 ACCCCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGAAACTTGGACCTCGTGTTTCT 408
|||||||||||||||||||||| ||| ||||| |||||| |||| ||||| | |||| ||
Sbjct 220 ACCCCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGGAACTCGGACCACTTGTTCCT 279
Query 409 TTATTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAGCATTTGGAGG 458
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 280 TTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAGCATTTGGAGG 329
> AT1G25083.1 | Symbols: | Glutamine amidotransferase type 1 family
protein | chr1:8808549-8810443 REVERSE LENGTH=794
Length=794
Score = 496 bits (268), Expect = 2e-139
Identities = 368/416 (88%), Gaps = 7/416 (2%)
Strand=Plus/Plus
Query 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 329 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 388
Query 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610
||||||||||| || || ||||||||||| ||||||| || | | || | | ||
Sbjct 389 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCAAACCCT-TTCAT-TG-TAGGTA 445
Query 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670
||||||||| ||||| |||||||||||| |||| ||||||| ||| |||||||||||||
Sbjct 446 GATATCACAGTCTCGTGATCGAAAAAGATACATTTCCTAGTGATGAGCTCGAGGTTACAG 505
Query 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTATAGGCATATACAA 729
||||||||| ||||||||||||||||||| || |||||| | ||||| | |||||||||
Sbjct 506 CATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 564
Query 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTGTCTGCAAT 789
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 565 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAGGGCAAGACAATTGTCCGCAAT 624
Query 790 TTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAGACTAGTCTGGATGAG 849
||||||||| |||||||||||||||| || ||||||||||| |||||||| ||| |||||
Sbjct 625 TTCATCAAAATCGTAGAGAAAAAGGATTCCGAGAAGCTGACGTAGACTAGCCTGAATGAG 684
Query 850 AAAATCAGCTGTGTTTGATTAGTTCCTCCCTGTAATAATGTCTGCCAATGCAAAAT 905
|||||| |||||||| || |||| ||||||||||||||| | ||||||||||||||
Sbjct 685 AAAATCTGCTGTGTTCGAATAGTGCCTCCCTGTAATAATATTTGCCAATGCAAAAT 740
Score = 331 bits (179), Expect = 7e-90
Identities = 297/350 (85%), Gaps = 24/350 (7%)
Strand=Plus/Plus
Query 112 ATGGCGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCT 171
||||| ||||||||||||| |||||| ||| || ||||||||||||| ||||||||| ||
Sbjct 1 ATGGCAGAATCGAATTCGATACCTTCCGTTGTTATCAATTCCTCTAAACAGAATGGTCCT 60
Query 172 ATCATCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCATAtttttttcaat 231
|||||||||||||||||||||||||||||| ||||||||||||||| | | |
Sbjct 61 ATCATCGTGATTGATAATTACGACAGCTTCACTTACAATCTCTGCC--A-----GT--A- 110
Query 232 tttttattttGTTTCG-GTCAAGGATGCCGA-TTTGAAGTTTACCGCAATTATGAACTTA 289
|| || | | | | ||||| | |||||||||||||||||| |||||||||
Sbjct 111 ----TA---TG-GGAGAG-CTACAATGCC-ATTTTGAAGTTTACCGCAATGATGAACTTA 160
Query 290 CAGTAGAGGAGCTGAAAA-ATAAAAATCCAAGAGTAATGTTGATTTCTCCTGGACCTGGT 348
||||||| |||||||||| | ||||||||||||| | |||||||||||||||||||||||
Sbjct 161 CAGTAGAAGAGCTGAAAAGA-AAAAATCCAAGAGGAGTGTTGATTTCTCCTGGACCTGGT 219
Query 349 ACCCCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGAAACTTGGACCTCGTGTTTCT 408
|||||||||||||||||||||| ||| ||||| |||||| |||| ||||| | |||| ||
Sbjct 220 ACCCCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGGAACTCGGACCACTTGTTCCT 279
Query 409 TTATTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAGCATTTGGAGG 458
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 280 TTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAGCATTTGGAGG 329
> AT1G24807.1 | Symbols: | Glutamine amidotransferase type 1 family
protein | chr1:8771766-8773535 REVERSE LENGTH=708
Length=708
Score = 409 bits (221), Expect = 3e-113
Identities = 305/345 (88%), Gaps = 7/345 (2%)
Strand=Plus/Plus
Query 493 GAAAGATTGTGCGGTCACTATTTGGTGTTATGCATAGGAAAAGCTCAATGGTTCACTATG 552
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 368 GAAAGATTGTGCGGTCACCATTTGGTGTTATGCATGGGAAAAGCTCAATGGTTCACTATG 427
Query 553 ATGAGAAAGGAAAATAATGCTTGTTCTCTAGATTATCCAA--GTATAAATCAGATTTGTT 610
||||||||||| || || ||||||||||| ||||||| || | | || | | ||
Sbjct 428 ATGAGAAAGGAGAAGAAGGCTTGTTCTCTGGATTATCAAACCCT-TTCAT-TG-TAGGTA 484
Query 611 TATATCACAGCCTCGTCATCGAAAAAGATTCATTCCCTAGTGGTGAACTCGAGGTTACAG 670
||||||||| ||||| |||||||||||| |||| ||||||| ||| |||||||||||||
Sbjct 485 GATATCACAGTCTCGTGATCGAAAAAGATACATTTCCTAGTGATGAGCTCGAGGTTACAG 544
Query 671 CATGGACAGCAGATGGTCTGGTTATGGCTTCCTGTCACATG-AAGTATAGGCATATACAA 729
||||||||| ||||||||||||||||||| || |||||| | ||||| | |||||||||
Sbjct 545 CATGGACAGAAGATGGTCTGGTTATGGCTGCCCGTCACA-GAAAGTACAAGCATATACAG 603
Query 730 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAAGGCAAGACAATTGTCTGCAAT 789
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 604 GGAGTTCAATTTCATCCGGAGAGTATTATAACAACTGAGGGCAAGACAATTGTCCGCAAT 663
Query 790 TTCATCAAACTCGTAGAGAAAAAGGAATCTGAGAAGCTGACATAG 834
||||||||| |||||||||||||||| || ||||||||||| |||
Sbjct 664 TTCATCAAAATCGTAGAGAAAAAGGATTCCGAGAAGCTGACGTAG 708
Score = 350 bits (189), Expect = 2e-95
Identities = 314/370 (85%), Gaps = 25/370 (7%)
Strand=Plus/Plus
Query 112 ATGGCGGAATCGAATTCGACACCTTCTGTTTTTGTCAATTCCTCTAAGCAGAATGGTTCT 171
||||| ||||||||||||| |||||| ||| || ||||||||||||| ||||||||| ||
Sbjct 1 ATGGCAGAATCGAATTCGATACCTTCCGTTGTTATCAATTCCTCTAAACAGAATGGTCCT 60
Query 172 ATCATCGTGATTGATAATTACGACAGCTTCGCTTACAATCTCTGCCA-TAt--------t 222
|||||||||||||||||||||||||||||| |||||||||||||||| ||| |
Sbjct 61 ATCATCGTGATTGATAATTACGACAGCTTCACTTACAATCTCTGCCAGTATAAACAAAAT 120
Query 223 tttttcaatt--t-tttattt-t---GT-T-T-CG-G-TCAAGGATGCCGA-TTTGAAGT 269
||| |||| | | ||||| | || | | | | | | ||||| | ||||||||
Sbjct 121 TTTGAGAATTGCTATCTATTTCTACAGTATATGGGAGAGCTACAATGCC-ATTTTGAAGT 179
Query 270 TTACCGCAATTATGAACTTACAGTAGAGGAGCTGAAAA-ATAAAAATCCAAGAGTAATGT 328
|||||||||| |||||||||||||||| |||||||||| | ||||||||||||| | |||
Sbjct 180 TTACCGCAATGATGAACTTACAGTAGAAGAGCTGAAAAGA-AAAAATCCAAGAGGAGTGT 238
Query 329 TGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTTCTTTCAAACAGTTTTGA 388
|||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||
Sbjct 239 TGATTTCTCCTGGACCTGGTACCCCTCAAGACTCTGGGATTTCCTTGCAAACTGTTTTGG 298
Query 389 AACTTGGACCTCGTGTTTCTTTATTTGGAGTATGTATGAATTTGCAGTGTATAGGAGAAG 448
|||| ||||| | |||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 299 AACTCGGACCACTTGTTCCTTTATTTGGAGTATGTATGGGTTTGCAGTGTATAGGAGAAG 358
Query 449 CATTTGGAGG 458
||||||||||
Sbjct 359 CATTTGGAGG 368
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45612605476
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5