BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484788
Length=2725
Score E
Sequences producing significant alignments: (Bits) Value
AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3... 3884 0.0
AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase 1... 2392 0.0
AT4G02280.1 | Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4... 525 8e-148
> AT3G43190.1 | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:15179020-15183989
REVERSE LENGTH=2764
Length=2764
Score = 3884 bits (2103), Expect = 0.0
Identities = 2415/2568 (94%), Gaps = 12/2568 (0%)
Strand=Plus/Plus
Query 33 TTCATTCACTTCTAATTATTTCCAGTGACCTCCTTGGCCAGTAACTTTTCGTAGCATTTT 92
|||||||||| | | |||||| |||||||||||| |||||| ||||| ||||||| |||
Sbjct 66 TTCATTCACTAC--A-TATTTCTAGTGACCTCCTTCGCCAGTGACTTTCCGTAGCAATTT 122
Query 93 CAGTTTCAAAAGCTTTTTGATTTTGTTTGAAATGGCAAACGCGGAACGTGTAATAACGCG 152
||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 123 AAGTTTCAAAAGCTTTGTGATTGTGTTTGAAATGGCAAACGCAGAACGTGTAATAACGCG 182
Query 153 CGTCCACAGCCAGCGAGAGCGTTTGGATGCTACTCTTATTGCTCAGAAAAATGAAGTCCT 212
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |
Sbjct 183 AGTCCACAGCCAGCGAGAGCGTTTGGATGCAACTCTTGTTGCTCAGAAAAATGAAGTATT 242
Query 213 TGCTTTGCTCTCAAGGGTTGAAGCCAAAGGCAAAGGCATTCTACAATATCACCAGATCAT 272
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 243 TGCTTTGCTCTCAAGGGTTGAAGCCAAAGGCAAAGGCATTCTACAACACCACCAGATCAT 302
Query 273 TGCTGAGTTTGAGGCAATGCCTTTAGAGACACAAAAGAAGCTTCAAGGTGGAGCTTTCTT 332
|||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 303 TGCTGAATTTGAGGCAATGCCTTTAGAGACACAGAAGAAGCTTAAAGGTGGAGCTTTCTT 362
Query 333 CGAAATCCTCCGTTCAGCTCAAGAAGCAATTGTGTTACCACCATTTGTTGCTTTAGCTGT 392
|||| | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 363 CGAATTTCTCCGATCAGCTCAAGAGGCAATTGTGTTACCACCATTTGTTGCTTTAGCTGT 422
Query 393 GAGACCAAGACCTGGAGTTTGGGAATACGTAAGAGTTAACCTCCATGATCTTGTCGTTGA 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 GAGACCAAGACCTGGAGTTTGGGAATACGTAAGAGTTAACCTCCATGATCTTGTCGTTGA 482
Query 453 CGAGCTTCAAGCTTCTGAATATCTTCAATTCAAGGAAGAGCTCGTCGATGGAATTAGGAA 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 483 GGAGCTTCAAGCTTCTGAATATCTTCAATTCAAGGAAGAGCTCGTCGATGGAATTAAGAA 542
Query 513 TGGTAACTTCACTCTCGAGCTTGACTTTGAACCATTCAACGCCGCATTCCCTCGTCCCAC 572
||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||
Sbjct 543 TGGAAACTTCACTCTTGAACTTGACTTTGAACCATTCAACGCGGCATTCCCTCGTCCTAC 602
Query 573 GCTCAACAAGTACATTGGAAATGGGGTTGAGTTCCTCAATCGCCATCTCTCGGCTAAGCT 632
||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct 603 GCTCAACAAGTACATTGGAGATGGCGTTGAGTTCCTCAACCGCCATCTCTCGGCTAAGCT 662
Query 633 CTTCCATGACAAGGAGAGCTTGCATCCTCTGCTCAAGTTCCTGCGCCTCCATTCCCACGA 692
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 663 CTTCCATGACAAGGAGAGCTTGCATCCGCTGCTCAAGTTCCTCCGCCTCCATTCCCACGA 722
Query 693 GGGCAAGACTCTGATGCTTAACGACAGGATCCAGAACCTAAACACACTGCAACACAATCT 752
||| |||||||||||||||||| | |||||||||||||||||||| || |||||||||||
Sbjct 723 GGGAAAGACTCTGATGCTTAACAATAGGATCCAGAACCTAAACACCCTACAACACAATCT 782
Query 753 GAGGAAAGCAGAGGAGTATCTTATGGAGCTGAAACCCGAGACACCCTACTCGGAGTTTGA 812
||| ||||||||||| ||||| ||||||||||| || ||||||| |||||| ||||||||
Sbjct 783 GAGAAAAGCAGAGGAATATCTAATGGAGCTGAAGCCTGAGACACTCTACTCAGAGTTTGA 842
Query 813 CCACAAGTTCCAGGGGATTGGTCTTGAGAGAGGTTGGGGAGACACCGCGGTGCGTGTACT 872
||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||
Sbjct 843 GCACAAGTTCCAGGAGATTGGTCTTGAGAGAGGCTGGGGAGACACCGCGGAGCGTGTTCT 902
Query 873 TGACATGATTCGTCTTCTTCTTGACCTTCTCGAGGCACCTGACCCTT-TCACTCTTGGGA 931
| ||||||| ||||||||||||||||||||||||||||||||||||| | ||||||| ||
Sbjct 903 TAACATGATCCGTCTTCTTCTTGACCTTCTCGAGGCACCTGACCCTTGT-ACTCTTGAGA 961
Query 932 ATTTCCTTGGAAGGATACCAATGGTTTTCAACGTTGTGATCTTATCTCCACATGGATACT 991
||||||||||||| || |||||||||||||||||||||||| | ||||| ||||||||||
Sbjct 962 ATTTCCTTGGAAGAATCCCAATGGTTTTCAACGTTGTGATCCTCTCTCCTCATGGATACT 1021
Query 992 TTGCTCAGGATAATGTTCTTGGTTACCCTGACACTGGTGGTCAGGTTGTTTACATTCTTG 1051
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1022 TTGCTCAGGACAATGTTCTTGGTTACCCTGACACAGGTGGTCAGGTTGTTTACATTCTTG 1081
Query 1052 ATCAAGTTCGTGCTCTCGAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCACCA 1111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1082 ATCAAGTTCGTGCTCTCGAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCAACA 1141
Query 1112 TCACTCCGAGAATCCTAATTATCACTCGGTTGCTTCCTGATGCAGCAGGAACCACTTGTG 1171
||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||
Sbjct 1142 TCACTCCGAGAATCCTAATCATCACTCGGCTGCTTCCTGACGCAGCAGGAACCACTTGTG 1201
Query 1172 GTCAACGTCTAGAGAAAGTGTACGGATCTCAGTATTGTGATATCCTCCGTGTACCTTTTA 1231
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1202 GTCAACGTCTAGAGAAAGTGTACGGATCTCAGTATTGTGATATCCTCCGTGTGCCTTTTA 1261
Query 1232 GAACAGAGAAAGGAATCGTTCGCAAATGGATCTCAAGGTTTGAGGTCTGGCCGTATCTAG 1291
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1262 GAACAGAGAAAGGAATCGTTCGCAAATGGATATCAAGGTTTGAGGTCTGGCCGTATCTAG 1321
Query 1292 AGACTTTTACCGAGGATGTTGCAGCTGAAATCTCGAATGAGTTACAAGGGAAACCTGACC 1351
|||||||||||||||||||||| |||||||||||||| ||||| || ||||| ||||||
Sbjct 1322 AGACTTTTACCGAGGATGTTGCCGCTGAAATCTCGAAAGAGTTGCAGGGGAAGCCTGAC- 1380
Query 1352 TT-ATCATTGGAAACTATAGTGATGGTAATCTTGTTGCCTCTTTGTTAGCACACAAACTT 1410
|| |||||||||||||| |||||||||||||||||||| || ||||||||||||||||||
Sbjct 1381 TTGATCATTGGAAACTACAGTGATGGTAATCTTGTTGCATCCTTGTTAGCACACAAACTT 1440
Query 1411 GGTGTCACTCAGTGTACCATTGCTCATGCTTTGGAGAAGACTAAGTACCCGGATTCTGAT 1470
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GGTGTCACTCAGTGCACCATCGCTCATGCTTTGGAGAAGACTAAGTACCCGGATTCTGAT 1500
Query 1471 ATCTACTGGAAGAAGCTTGACGAGAAGTATCACTTCTCTTGCCAGTTCACTGCTGATCTT 1530
||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1501 ATCTACTGGAAGAAGCTCGACGAGAAGTATCACTTTTCTTGCCAGTTCACGGCTGATCTT 1560
Query 1531 ATCGCCATGAACCACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGC 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 ATCGCCATGAACCACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGC 1620
Query 1591 AAGGACACTGTTGGTCAGTACGAGAGTCACACAGCTTTCACACTTCCCGGGCTATATCGT 1650
||||||||||||||||| || ||||| |||| | ||||||||||||||||| | || |||
Sbjct 1621 AAGGACACTGTTGGTCAATATGAGAGCCACAGATCTTTCACACTTCCCGGGTTGTACCGT 1680
Query 1651 GTGGTTCACGGGATCGATGTGTTTGATCCCAAGTTCAACATTGTCTCTCCTGGTGCGGAT 1710
|| |||||||| || |||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 1681 GTAGTTCACGGTATTGATGTGTTTGATCCAAAGTTCAACATTGTCTCTCCTGGAGCAGAT 1740
Query 1711 ATGAGCATATACTTCGCCTACACTGAGGAGAAGCGTAGATTAACTGCATTCCATCAAGAG 1770
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 1741 ATGAGCATCTACTTCGCTTACACCGAGGAGAAGCGTAGATTAACTGCATTCCATCTAGAG 1800
Query 1771 ATTGAGGAGCTCCTCTACAGTGATGTTGAGAACGAAAAGCACCTATGTGTGCTAAAGGAC 1830
|| |||||||||||||| ||||||||||| |||||| ||||| |||||||||| ||||||
Sbjct 1801 ATCGAGGAGCTCCTCTATAGTGATGTTGAAAACGAAGAGCACTTATGTGTGCTTAAGGAC 1860
Query 1831 AAGAAGAAGCCAATCCTCTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGT 1890
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1861 AAGAAGAAGCCAATAATTTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGT 1920
Query 1891 CTTGTTGAGTGGTATGGTAAGAACACTCGCCTGCGCGAACTGGTGAACTTGGTCGTTGTG 1950
|||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1921 CTTGTTGAGTGGTACGGTAAGAACACTCGCTTGCGCGAACTGGTGAACTTGGTGGTTGTG 1980
Query 1951 GGTGGAGACAGGAGCAAAGAGTCGCAGGACAATGAAGAAAAGGCTGAGATGAAGAAAATG 2010
|||||||||||||| |||||||| |||||||| ||||| ||||| |||||||||||||||
Sbjct 1981 GGTGGAGACAGGAGGAAAGAGTCACAGGACAACGAAGAGAAGGCCGAGATGAAGAAAATG 2040
Query 2011 TATGATCTGATTGAGGAATACAAACTTAACGGGCAGTTTCGATGGATCTCCTCACAGATG 2070
||||| ||||| |||||||||||||| |||||||| || ||||||||||| |||||||||
Sbjct 2041 TATGAACTGATAGAGGAATACAAACTCAACGGGCAATTCCGATGGATCTCTTCACAGATG 2100
Query 2071 AACCGAGTGAGAAACGGCGAGCTTTACCGTTACATATGTGACACCAAAGGTGCATTTGTA 2130
||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 2101 AACAGAGTGAGAAACGGTGAGCTTTACCGTTACATATGTGACACTAAAGGTGCATTTGTG 2160
Query 2131 CAGCCTGCTCTTTATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTA 2190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2161 CAGCCTGCTCTTTATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTA 2220
Query 2191 CCGACTTTCGCTACTTGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGT 2250
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2221 CCGACTTTCGCTACTTGTAATGGCGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGT 2280
Query 2251 TTCCACATTGATCCATACCATGGTGACCAGGCAGCTGAGACG-CTTGCTGATTTCTTCAC 2309
||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||
Sbjct 2281 TTCCACATTGATCCATATCATGGTGACAAGGCAGCTGAGA-GTCTTGCTGATTTCTTCAC 2339
Query 2310 CAAGTGTAAGCATGACCCATCTCATTGGGATCAGATTTCATTGGGAGGACTTGAGAGGAT 2369
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 2340 CAAGTGTAAGCATGACCCATCTCACTGGGATCAGATCTCATTGGGAGGACTTGAGAGGAT 2399
Query 2370 CCAGGAGAAATATACATGGCAAATTTACTCAGAGAGGCTCTTGACATTGACTGGTGTCTA 2429
||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 2400 CCAGGAGAAATATACTTGGCAAATATACTCACAGAGGCTCTTGACATTGACTGGTGTCTA 2459
Query 2430 CGGCTTCTGGAAACATGTCTCGAACCTTGACCGTCTTGAGAGTCGTCGATACCTTGAGAT 2489
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 CGGCTTTTGGAAACATGTCTCGAACCTTGACCGTCTTGAGAGTCGTCGATACCTTGAGAT 2519
Query 2490 GTTCTACGCATTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCAGGAAGAGTG 2549
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2520 GTTCTACGCACTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCATGAAGAGTG 2579
Query 2550 AAAGAAGA---TTTTCTACCTTCTACAACAATAAAGATCTCTCATTGT 2594
|||||||| |||||||| ||||||||||||||||||||||| ||||
Sbjct 2580 AAAGAAGAAGATTTTCTACATTCTACAACAATAAAGATCTCTCTTTGT 2627
> AT5G20830.1 | Symbols: SUS1, ASUS1, atsus1 | sucrose synthase
1 | chr5:7050226-7054120 REVERSE LENGTH=2888
Length=2888
Score = 2392 bits (1295), Expect = 0.0
Identities = 2085/2465 (85%), Gaps = 59/2465 (2%)
Strand=Plus/Plus
Query 123 AATGGCAAACGCGGAACGTGTAATAACGCGCGTCCACAGCCAGCGAGAGCGTTTGGATGC 182
|||||||||||| |||||| | |||||||||||||||||||| || ||||||||| | |
Sbjct 88 AATGGCAAACGCTGAACGTATGATAACGCGCGTCCACAGCCAACGTGAGCGTTTGAACGA 147
Query 183 TACTCTTATTGCTCAGAAAAATGAAGTCCTTGCTTTGCTCTCAAGGGTTGAAGCCAAAGG 242
|| ||| || || ||| ||| ||||||||||| ||||| || |||||||||||||||||
Sbjct 148 AACGCTTGTTTCTGAGAGAAACGAAGTCCTTGCCTTGCTTTCCAGGGTTGAAGCCAAAGG 207
Query 243 CAAAGGCATTCTACAATATCACCAGATCATTGCTGAGTTTGAGGCAATGCCTTTAGAGAC 302
||||| ||| ||||| | |||||||||||||||| || || || ||||| | | ||
Sbjct 208 TAAAGGTATTTTACAACAAAACCAGATCATTGCTGAATTCGAAGCTTTGCCTGAACAAAC 267
Query 303 ACAAAAGAAGCTTCAAGGTGGAGCTTTCTTCGAAATCCTC-CGTTCAGCTCAAGAAGCAA 361
| ||||| ||| ||||||| ||||||| || | ||| | || |||| |||||||
Sbjct 268 CCGGAAGAAACTTGAAGGTGGTCCTTTCTTTGACCTTCTCAAATCCA-CTCAGGAAGCAA 326
Query 362 TTGTGTTACCACCATTTGTTGCTTTAGCTGTGAGACCAAGACCTGGAGTTTGGGAATACG 421
||||||| ||||||| |||||| |||||||||| ||||| ||||| ||||||||||||
Sbjct 327 TTGTGTTGCCACCATGGGTTGCTCTAGCTGTGAGGCCAAGGCCTGGTGTTTGGGAATACT 386
Query 422 TAAGAGTTAACCTCCATGATCTTGTCGTTGACGAGCTTCAAGCTTCTGAATATCTTCAAT 481
|| |||| || ||||||| |||||||||||| || || ||| || |||| | |||||| |
Sbjct 387 TACGAGTCAATCTCCATGCTCTTGTCGTTGAAGAACTCCAACCTGCTGAGTTTCTTCATT 446
Query 482 TCAAGGAAGAGCTCGTCGATGGAATTAGGAATGGTAACTTCACTCTCGAGCTTGACTTT- 540
|||||||||| ||||| |||||| ||| ||||||||| |||||||| |||||||| |||
Sbjct 447 TCAAGGAAGAACTCGTTGATGGAGTTAAGAATGGTAATTTCACTCTTGAGCTTGA-TTTC 505
Query 541 GAACCATTCAACGCCG-CAT-TCCCTCGTCCCACGCTCAACAAGTACATTGGAAATGGGG 598
|| |||||||| | || | | |||||||||| || ||| |||| |||||||||||||| |
Sbjct 506 GAGCCATTCAATG-CGTC-TATCCCTCGTCCAACACTCCACAAATACATTGGAAATGGTG 563
Query 599 TTGAGTTCCTCAATCGCCATCTCTCGGCTAAGCTCTTCCATGACAAGGAGAGCTTGCATC 658
|||| ||||| || || ||| | ||||||||||||||||||||||||||||| |||| ||
Sbjct 564 TTGACTTCCTTAACCGTCATTTATCGGCTAAGCTCTTCCATGACAAGGAGAGTTTGCTTC 623
Query 659 C-TCTGCTCAAGTTCCTGCGCCTCCATTCCCACGAGGGCAAG-ACTCTGATGCTT-AACG 715
| | |||| |||||||| || || || |||| |||||||| || |||||| || | ||
Sbjct 624 CAT-TGCTTAAGTTCCTTCGTCTTCACAGCCACCAGGGCAAGAAC-CTGATG-TTGAGCG 680
Query 716 ACAGGATCCAGAACCTAAACACACTGCAACACAATC-TGAGGAAAGCAGAGGAGTATCTT 774
| | ||| |||||||| ||||| ||||||||| | | ||||||||||||| ||||||| |
Sbjct 681 AGAAGATTCAGAACCTCAACACTCTGCAACAC-ACCTTGAGGAAAGCAGAAGAGTATC-T 738
Query 775 ATG--GAGCTGAAACCCGAGACACCCTACTCG--GAGTTTGA-CCACAAGTTCCAGGGGA 829
| | ||||| || |||| |||| || | | |||||||| | |||||| ||| ||
Sbjct 739 A-GCAGAGCTTAAGTCCGAAACACTGTA-T-GAAGAGTTTGAGGC-CAAGTTTGAGGAGA 794
Query 830 TTGGTCTTGAGAGAGGTTGGGGAGACACCGCGGTGCGTGTACTTGACATGATTCGTCTTC 889
||||||||||||| || |||||||||| || | |||||| ||||||||||| |||||||
Sbjct 795 TTGGTCTTGAGAGGGGATGGGGAGACAATGCAGAGCGTGTCCTTGACATGATACGTCTTC 854
Query 890 TTCTT-GACCTTCTCGAGGCACCTGACCCTTTCACTCTTGGGAATTTCCTTGGAAGGA-T 947
|| || |||||||| ||||| ||||| |||| |||||||| || ||| ||||||| || |
Sbjct 855 TT-TTGGACCTTCTTGAGGCGCCTGATCCTTGCACTCTTGAGACTTTTCTTGGAA-GAGT 912
Query 948 ACCAATGGTTTTCAACGTTGTGATCTTATCTCCACATGGATACTTTGCTCAGGATAATGT 1007
||||||||| ||||||||||||||| | ||||||||||| |||||||||||||| |||||
Sbjct 913 ACCAATGGTGTTCAACGTTGTGATCCTCTCTCCACATGGTTACTTTGCTCAGGACAATGT 972
Query 1008 TCTTGGTTACCCTGACACTGGTGGTCAGGTTGTTTACATTCTTGATCAAGTTCGTGCTCT 1067
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 973 TCTTGGTTACCCTGACACTGGTGGACAGGTTGTTTACATTCTTGATCAAGTTCGTGCTCT 1032
Query 1068 CGAAACAGAGATGCTCCAACGCATCAAACAACAAGGACTCACCATCACTCCGAGAATCCT 1127
|| | ||||||||| ||||| || || ||||||||||||| ||| | || || || ||
Sbjct 1033 GGAGATAGAGATGCTTCAACGTATTAAGCAACAAGGACTCAACATTAAACCAAGGATTCT 1092
Query 1128 AATTATCACTCG-GTTGCTTCCTGATGCAGCAGGAACCACTTGTGGTCAACGTCTAGAGA 1186
||| | ||||| || || |||||||| | |||||| || || ||| ||||||| ||||
Sbjct 1093 CATTCTAACTCGACTT-CTACCTGATGCGGTAGGAACTACATGCGGTGAACGTCTCGAGA 1151
Query 1187 AAGTGTACGGA-TCTCAGTATTGTGATATCCTCCGTGTACCTTTTAGAACAGAGAAAGGA 1245
||| || || ||| |||| |||||||| || ||||| || || ||||||||||| ||
Sbjct 1152 GAGTTTA-TGATTCTGAGTACTGTGATATTCTTCGTGTGCCCTTCAGAACAGAGAAGGGT 1210
Query 1246 ATCGTTCGCAAATGGATCTCAAGGTTTGAGGTCTGGCCGTATCTAGAGACTTTTACCGAG 1305
|| ||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||
Sbjct 1211 ATTGTTCGCAAATGGATCTCAAGGTTCGAAGTCTGGCCATATCTAGAGACTTACACCGAG 1270
Query 1306 GATGTTGCAGCTGAAATCTCGAATGAGTTACAA-GGGAAACCTGACCTTATCATTGGAAA 1364
|||| ||| | ||| | ||||| || || || || || ||||||||||||||||| ||
Sbjct 1271 GATGCTGCGGTTGAGCTATCGAAAGAATT-GAATGGCAAGCCTGACCTTATCATTGGTAA 1329
Query 1365 CTATAGTGATGGTAATCTTGTTGCCTCTTTGTTAGCACACAAACTTGGTGTCACTCAGTG 1424
||| |||||||| ||||||||||| ||||| || || |||||||||||||||||||||||
Sbjct 1330 CTACAGTGATGGAAATCTTGTTGCTTCTTTATTGGCTCACAAACTTGGTGTCACTCAGTG 1389
Query 1425 TACCATTGCTCATGCT-TTGGAGAAGACTAAGTACCCGGATTCTGATATCTACTGGAAGA 1483
|||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct 1390 TACCATTGCTCATGCTCTT-GAGAAAACAAAGTACCCGGATTCTGATATCTACTGGAAGA 1448
Query 1484 AGCTTGACGAGAAGTATCACTTCTCTTGCCAGTTCACTGCTGATCTTATCGCCATGAACC 1543
|||||||||| ||||| || ||||| |||||||||||||| ||| || |||| |||||||
Sbjct 1449 AGCTTGACGACAAGTACCATTTCTCATGCCAGTTCACTGCGGATATTTTCGCAATGAACC 1508
Query 1544 ACACAGATTTCATCATCACAAGTACTTTCCAAGAAATTGCTGGAAGCAAGGACACTGTTG 1603
|||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct 1509 ACACTGATTTCATCATCACTAGTACTTTCCAAGAAATTGCTGGAAGCAAAGAAACTGTTG 1568
Query 1604 GTCAGTACGAGAGTCACACAGC-TTTCACACTTCCCGGGCTATATCGTGTGGTTCACGGG 1662
| ||||| || || |||||||| ||| || |||||||| | ||||| || |||||||||
Sbjct 1569 GGCAGTATGAAAGCCACACAGCCTTT-ACTCTTCCCGGATTGTATCGAGTTGTTCACGGG 1627
Query 1663 ATCGATGTGTTTGATCCCAAGTTCAACATTGTCTCTCCTGGTGCGGATATGAGCATATAC 1722
|| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1628 ATTGATGTGTTTGATCCCAAGTTCAACATTGTCTCTCCTGGTGCTGATATGAGCATCTAC 1687
Query 1723 TTCGCCT-ACACTGAGGAGAAGCGTAGATTAACTGCA-TTCCA-TCAAGAGATTGAGGAG 1779
||| ||| |||| ||||||||||||||||| ||| | ||||| || ||||| ||||||
Sbjct 1688 TTC-CCTTACACAGAGGAGAAGCGTAGATTGACTA-AGTTCCACTCT-GAGATCGAGGAG 1744
Query 1780 CTCCTCTACAGTGATGTTGAGAACGAAA-AGCACCTATGTGTGCTAAAGGACAAGAAGAA 1838
||||||||||| |||||||||||| ||| ||||| |||||||||| ||||||||||||||
Sbjct 1745 CTCCTCTACAGCGATGTTGAGAAC-AAAGAGCACTTATGTGTGCTCAAGGACAAGAAGAA 1803
Query 1839 GCCAATCCTCTTCACCATGGCTAGGCTTGACCGTGTAAAGAACTTATCAGGTCTTGTTGA 1898
||| || |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct 1804 GCCGATTCTCTTCACAATGGCTAGGCTTGATCGTGTCAAGAACTTGTCAGGTCTTGTTGA 1863
Query 1899 GTGGTATGGTAAGAACACTCGCCTGCGCGAACTGG-TGAACTTGGTCGTTGTGGGTGGAG 1957
|||||| || |||||||| ||| |||| || || | | |||||||| ||||| || ||||
Sbjct 1864 GTGGTACGGGAAGAACACCCGCTTGCGTGAGCTAGCT-AACTTGGTTGTTGTTGGAGGAG 1922
Query 1958 ACAGGAGCAAAGAGTCGCAGGACAATGAAGA-AAAGGCTGAGATGAAGAAAATGTATGAT 2016
||||||| |||||||| ||||||||||||| |||| | |||||||||||||||||||||
Sbjct 1923 ACAGGAGGAAAGAGTCAAAGGACAATGAAGAGAAAG-CAGAGATGAAGAAAATGTATGAT 1981
Query 2017 CTGATTGAGGAATACAAACTTAACGGGCAGTTTC-GATGGATCTCCTCACAGATGAACCG 2075
|| |||||||||||||| || ||||| ||||| | | ||||||||||| |||||| ||||
Sbjct 1982 CTCATTGAGGAATACAAGCTAAACGGTCAGTT-CAGGTGGATCTCCTCTCAGATGGACCG 2040
Query 2076 AGTGAGAAACGGCGAGCTTTACCGTTACATATGTGACACCAAAGGTGCATTTGTACAGCC 2135
|| || ||||| ||||| ||||| ||||| ||||||||||| ||||| ||||| || ||
Sbjct 2041 GGTAAGGAACGGTGAGCTGTACCGGTACATCTGTGACACCAAGGGTGCTTTTGTCCAACC 2100
Query 2136 TGCTCTT-TATGAAGCCTTTGGGTTGACTGTTGTTGAGGCTATGACCTGTGGGTTACCGA 2194
||| || ||||||||||||||||| |||||||| ||||||||||| ||||| |||||||
Sbjct 2101 TGCA-TTATATGAAGCCTTTGGGTTAACTGTTGTGGAGGCTATGACTTGTGGTTTACCGA 2159
Query 2195 CTTTCGCTACTTGCAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGTTTCC 2254
||||||| |||||||| |||||||| ||||||||||||||||| || ||||| |||||||
Sbjct 2160 CTTTCGCCACTTGCAAAGGTGGTCCAGCTGAGATCATTGTGCACGGTAAATCGGGTTTCC 2219
Query 2255 ACATTGATCCATACCATGGTGACCAGGCAGCTGAGACGCTTGCTGATTTCTTCACCAAGT 2314
||||||| || ||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct 2220 ACATTGACCCTTACCATGGTGATCAGGCTGCTGATACTCTTGCTGATTTCTTCACCAAGT 2279
Query 2315 GTAAGCATGACCCATCTCATTGGGATCAGATTTCATTGGGAGGACTTGAGAGGATCCAGG 2374
||||| | || |||||||| |||||| |||| ||| ||||| ||| ||||||| |||
Sbjct 2280 GTAAGGAGGATCCATCTCACTGGGATGAGATCTCAAAAGGAGGGCTTCAGAGGATTGAGG 2339
Query 2375 AGAAATATACATGGCAAATTTACTCAGAGAGGCTCTTGACATTGACTGGTGTCTACGGCT 2434
||||||| || |||||||| || ||| ||||||||||||||||||||||||| || || |
Sbjct 2340 AGAAATACACTTGGCAAATCTATTCACAGAGGCTCTTGACATTGACTGGTGTGTATGGAT 2399
Query 2435 TCTGGAAACATGTCTCGAACCTTGACCGTCTTGAGAG-TCGTCGATACCTTGAGATGTTC 2493
||||||| ||||||||||||||||||||||||||| | ||| || |||||||| ||||||
Sbjct 2400 TCTGGAAGCATGTCTCGAACCTTGACCGTCTTGAG-GCTCGCCGTTACCTTGAAATGTTC 2458
Query 2494 TACGCATTGAAGTACCGCCCACTGGCTCAAGCTGTTCCTCTTGCTCAGGAAGAGTGAA-A 2552
|| ||||||||||| |||||| ||||||| |||||||||||||| || || || |||| |
Sbjct 2459 TATGCATTGAAGTATCGCCCATTGGCTCAGGCTGTTCCTCTTGCACAAGATGATTGAAGA 2518
Query 2553 GAAGA 2557
|||||
Sbjct 2519 GAAGA 2523
> AT4G02280.1 | Symbols: SUS3, ATSUS3 | sucrose synthase 3 | chr4:994927-998967
FORWARD LENGTH=2917
Length=2917
Score = 525 bits (284), Expect = 8e-148
Identities = 1278/1743 (73%), Gaps = 127/1743 (7%)
Strand=Plus/Plus
Query 819 GTTCCAGGGGATTGGTCTTGAGAGAGGTTGGGGAGACACCGC-GGTGCGTGTACTTGACA 877
||| || || || ||| |||||| ||| |||||||| ||||| || | | || ||||| |
Sbjct 935 GTTGCAAGGAATGGGTTTTGAGAAAGGATGGGGAGATACCGCAGG-GAGAGTTCTTGAAA 993
Query 878 TGATTCGTCTTCTTCT-TGACCTTC-TCGAGGCACCTGACCCTTTCACT-CTTGG-GAA- 932
|||| | ||||| ||| ||| ||| || | || ||||| || ||| | ||||| |||
Sbjct 994 TGATGCATCTTC-TCTCTGATATTCTTC-AAGCTCCTGATCC-TTC-GTCCTTGGAGAAG 1049
Query 933 TTTCCTT-GGAAGGATACCAATGGTTTTCAACGTTGTGATCTTATCTCCACATGGATACT 991
||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1050 TTT-CTTGGGATGG-TACCAATGGTTTTCAACGTTGTGATCTTATCTCCACATGGATA-T 1106
Query 992 TT-GCTCAGGATAATGTTCTT-GG-TTACCCTGACACTGGTGGTCAGGTTGTTTACATTC 1048
|| | || | |||||| || || ||||| |||||||||||| || ||||| || ||||
Sbjct 1107 TTCGGGCAAGCCAATGTT-TTAGGCTTACC-TGACACTGGTGGACAAGTTGTCTATATTC 1164
Query 1049 TTGATCAAGTTCGTGCTCTCGAAACAGAGATGCTCCA-ACGCATCAAACA-ACAAGGACT 1106
|||| ||||| ||||| || || || || ||||| | | || ||| | ||| || |
Sbjct 1165 TTGACCAAGTCCGTGCCCTTGAGACTGAAATGCTGTTGA-GAAT-AAAGAGACAGGGGTT 1222
Query 1107 C-ACC-ATCACTCCGAGAATCCTAATTATCACTCGGTTGCTTCCTGATGC-AGCAGGAAC 1163
| ||||| | || || || ||| | ||| ||||| | || ||||| | ||||||
Sbjct 1223 GGATATATCAC-CT-AGTATTCTTATTGTAACTAGGTTGATACCGGATGCTAA-AGGAAC 1279
Query 1164 CACTTGTGGTCAACG-TCTAGAGAAAGTGTA-CGGATCTCAGTATTGTGATATCCTCCGT 1221
|| ||| || || | |||||| ||| | |||| | || || | |||| |||||
Sbjct 1280 TACGTGTAACCAGCGGT-TAGAGAGAGTC-AGCGGAACAGAGCATACTCATATTCTCCGG 1337
Query 1222 GTACCTTTTAGAACAGAGAAAGGAATCGTTCGCAAATGGATCTCAAGGTTTGAGGTCTGG 1281
|| |||||||| | |||||||||||| | || || ||||| ||||| || || || |||
Sbjct 1338 GTTCCTTTTAGGTCTGAGAAAGGAATCCTCCGTAAGTGGATTTCAAGATTCGACGTATGG 1397
Query 1282 CCGTATCTAGAGA-CTTTTAC-CGAGGATGTTGCA-GCTGAAATC-TCGAATGAGTTACA 1337
|| |||||||||| || | | | |||||| ||| || || || ||| ||| || ||
Sbjct 1398 CCTTATCTAGAGAACTATG-CTC-AGGATGCAGCAAGC-GAGATTGTCGG-TGAATTGCA 1453
Query 1338 AGG-GAAACCTGACCTTATCATTGGAAACTATAGTGATGGTAATCTTGTTGCCTCTTTGT 1396
||| | | || ||| ||||||| || ||||||||||| || || |||||||| || ||
Sbjct 1454 AGGCGTA-CCGGACTTTATCATCGGTAACTATAGTGACGGAAACCTTGTTGCATCGTTAA 1512
Query 1397 TAGCACACA-AACTTGGTGTCACTCAGTGTACCATTGCTCATGCTTTGGAGAAGACTAAG 1455
| ||||| | || | ||||| || || ||||| ||||| |||||||||||||| || |||
Sbjct 1513 TGGCACATAGAA-TGGGTGTTACACAATGTACTATTGCACATGCTTTGGAGAAAACCAAG 1571
Query 1456 TACCCGGATTCTGATATCTACTGGAA-GAAGCTT-GACGAGAAGTATCACTTCTCTTGCC 1513
|| || ||||| || || |||||||| || ||| ||| | |||||||| |||||||| |
Sbjct 1572 TATCCAGATTCAGACATTTACTGGAAAGA--CTTCGACAACAAGTATCATTTCTCTTGTC 1629
Query 1514 AGTTCACTGCTGATCTTATCGCCATGAACCACACAGATTTCATCATCACAAGTACTTTCC 1573
| ||||| |||||||||||||| |||||| || ||||||||||||||||||| |||| ||
Sbjct 1630 AATTCACAGCTGATCTTATCGCAATGAACAACGCAGATTTCATCATCACAAGCACTTACC 1689
Query 1574 AAGAAATTGCTGGAA-GCAAGGACACTGTTGGTCAGTACGAGAGTCACACAGCTTTCACA 1632
||||||| || |||| | ||| |||| || ||||| || || || ||| ||||| ||
Sbjct 1690 AAGAAATCGCAGGAACG-AAGAACACCGTCGGTCAATATGAAAGCCACGGGGCTTTTACG 1748
Query 1633 CTTCCCGGG-CTATATCGTGTGGTTCACGGGATCGATGTGTTTGATCCCAAGTTCAACAT 1691
|| |||||| |||||| | || || ||||| ||||||||||||||||| |||||||||||
Sbjct 1749 CT-CCCGGGACTATATAGAGTAGTACACGGCATCGATGTGTTTGATCCGAAGTTCAACAT 1807
Query 1692 TGTCTCTCCTGGTGCGGATATGAGCATATACTTCGCC-TACACTGAGGAGA--AGCGTAG 1748
||||| || ||||| || |||| |||||| ||| || || | || || | || | ||
Sbjct 1808 AGTCTCGCCCGGTGCAGACATGACCATATATTTC-CCGTATTCCGAAGAAACTAG-G-AG 1864
Query 1749 A-TTAACTGCATTCCATCAAG-AGATTGAGGAGCTCCTCTACAGTGATGTTGAGAAC-GA 1805
| ||| | || || ||| | || ||||| | ||||| || || ||| | ||
Sbjct 1865 ACTTA-CAGCTTTACATGGTTCA-ATAGAGGAAATGCTCTATAGCCCTGACCAGA-CTGA 1921
Query 1806 AAAGCACCTATGTGTGCTAAAG-GA-CAAGAAGAAGCCAATCCTCTTCACCATGGCTAGG 1863
|||| | || || | | || | | | |||||||| |||||| | ||||| |||
Sbjct 1922 TGAGCATGTCGGTACACTGA-GTGATCGATCA-AAGCCAATACTCTTCTCTATGGCGAGG 1979
Query 1864 CTTGACCGTGTAAAGAACTTATCAGGTCTT-GTTGAG-TGGTATGGTAAGAACACTC-GC 1920
|| ||| || |||||| | || ||| || |||||| || ||| |||||||||| |
Sbjct 1980 CTCGACAAAGTGAAGAACATCTCCGGT-TTAGTTGAGATG-TATAGTAAGAACACAAAGT 2037
Query 1921 CTGCGCGAACTGGTGAA-CTTGGTCGTTGTGGGTGG-AGACAG-GA-GCAAAGA-GTCGC 1975
|| | || ||||| || || ||| || | | ||| | ||| || | || | ||| |
Sbjct 2038 -TGAGGGAGCTGGTTAATCT-GGTTGTAATAGCTGGTA-ACATTGATGTGAACAAGTC-C 2093
Query 1976 AG-GACA-ATGAAGAAAAGGCT-GAGAT-GAAGAAAATGTATGATCTGATTGAGGAAT-A 2030
| || | | ||||||| | | ||||| || ||||||| || | || || || |||| |
Sbjct 2094 AAAGATAGA-GAAGAAATCG-TAGAGATTGA-GAAAATGCATAACCTTAT-GAAGAATTA 2149
Query 2031 CAAACTTAACGGGCAGTTTCGATGGAT--CTCCTCACAGATGAACCGAG-TGAGAAACGG 2087
||| ||| | || |||||||| ||||| || |||| | | ||||||| | |||| ||
Sbjct 2150 CAAGCTTGATGGACAGTTTCGTTGGATAACTGCTCAGAC-T-AACCGAGCTC-GAAATGG 2206
Query 2088 CGAGCTTTACCGTTACATATGTG-ACACCAA-AGGTGCATTTG-TACAGCCTGCTCTT-T 2143
||||||||||| ||||| | | | || || |||||| |||| | |||||||| || |
Sbjct 2207 TGAGCTTTACCGCTACATC-GCGGATAC-AAGAGGTGCTTTTGCT-CAGCCTGCG-TTCT 2262
Query 2144 ATGAAGCCTTTGGG-TTGACTGTTGTTGAGGCTATGACCTGTGGGTTACCGACTTTCGCT 2202
| || || ||||| || || || || || || ||||| || ||| | |||||||| ||
Sbjct 2263 ACGAGGCTTTTGGACTT-ACGGTAGTGGAAGCGATGACTTGCGGGCTCCCGACTTTTGCC 2321
Query 2203 ACTTG-CAATGGTGGTCCTGCTGAGATCATTGTGCATGGAAAATCTGGTTTCCACATTGA 2261
||||| || |||||||| || |||||||| | ||| || || ||||||||||| ||
Sbjct 2322 ACTTGTCAC-GGTGGTCCAGCAGAGATCATCGAGCACGGGCTCTCGGGTTTCCACATCGA 2380
Query 2262 TCCATACCATGGTGACCAGGCAGCTGAGACGCTTGCTGATTTCTTC-ACCAAGT-GTAAG 2319
|||||||||| ||| || || | | | | | ||||||||||| | | || |||||
Sbjct 2381 TCCATACCATCCTGAGCAAGCGGGTAACATAATGGCTGATTTCTTTGAAC--GTTGTAAG 2438
Query 2320 CATGACCCAT-CTCATTGGGATCAGATT-TCATTGGGAGGACTTGAGAGGATCCAGGAGA 2377
| || ||| | |||||| | | | | ||| | || || | ||||| | || |
Sbjct 2439 GAAGATCCAAAC-CATTGGAAGAA-AGTATCAGACGCTGGTCTCCAAAGGATATACGA-A 2495
Query 2378 AA-TATACATGGCAA-ATTTACTCAGAGAGGCTCTTGACATT-GACTGGTGTCTACGGCT 2434
| || |||||| || || ||||| ||||| | ||||| | | ||||||| || || |
Sbjct 2496 AGGTACACATGG-AAGATATACTCGGAGAGATTGATGACACTAG-CTGGTGTGTATGGTT 2553
Query 2435 TCTGGAAACATGTCTCGAACCTTG-ACCGTCTTGAGAGTCGTCGATACCTTGAGATGTTC 2493
|||||||| | || ||||| ||| | |||| ||||| ||| ||||| ||||| ||||||
Sbjct 2554 TCTGGAAATACGTATCGAAA-TTGGAGCGTCGTGAGACTCGGCGATATCTTGAAATGTTC 2612
Query 2494 TAC 2496
|||
Sbjct 2613 TAC 2615
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135350412214
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5