BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484806 Length=602 Score E Sequences producing significant alignments: (Bits) Value AT3G43630.1 | Symbols: | Vacuolar iron transporter (VIT) famil... 946 0.0 AT3G43660.1 | Symbols: | Vacuolar iron transporter (VIT) famil... 798 0.0 AT1G21140.1 | Symbols: | Vacuolar iron transporter (VIT) famil... 721 0.0 > AT3G43630.1 | Symbols: | Vacuolar iron transporter (VIT) family protein | chr3:15538816-15539418 FORWARD LENGTH=603 Length=603 Score = 946 bits (512), Expect = 0.0 Identities = 573/603 (95%), Gaps = 2/603 (0%) Strand=Plus/Plus Query 1 ATGGCATCTCACAACACCTTGAACCTAGACATGGAGGAAA-ATCAAGAAAAGGCTTTTGA 59 |||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 1 ATGGAATCTCACAACACCTTGAACCTAGACATGGA-GAAAGATCAAGAAAAGGCTTTTGA 59 Query 60 CTACTCCAAACGAGCTCAATGGCTACGAGCCGCCGTGCTCGGTGCGAACGACGGTCTAGT 119 ||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| || Sbjct 60 CTACTCCAAACGAGCTCAATGGCTAAGAGCCGCTGTGCTTGGTGCCAACGACGGTCTTGT 119 Query 120 CTCGACGGCTTCACTTATGATGGGTGTTGGTGCGGTCAAGCAAGACGTCAAGATCATGAT 179 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 120 CTCGACGGCTTCACTTATGATGGGTGTTGGTGCGGTCAAGCAAAACGTCAAGATCATGAT 179 Query 180 CTTAACTGGTTTTGCCGGTTTAGTGGCCGGAGCTTGTAGCATGGCGATCGGAGAGTTTGT 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 180 CTTAACTGGTTTTGCCGGTTTAGTGGCCGGAGCTTGTAGCATGGCGATTGGAGAGTTTGT 239 Query 240 CTCCGTTTACTCTCAGTATGACATAGAGGTGGCTCAGATGAagagagagaccggaggaga 299 ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 240 CTCTGTTTACTCTCAATATGACATAGAGGTAGCTCAGATGAAGAGAGAGACCGGAGGAGA 299 Query 300 ggtagagaaagagaAACTCCCGAGCCCAACCCAAGCGGCTGCAGCATCTGCGTTAGCGTT 359 | | ||||||||||| || || || ||||| ||||||||||||||||||||||||||||| Sbjct 300 GATTGAGAAAGAGAAGCTTCCAAGTCCAACACAAGCGGCTGCAGCATCTGCGTTAGCGTT 359 Query 360 TTCTCTCGGGGCGATGGTGCCGTTATTGGCGGCTGCGTTTGTGAAAGAGTATAAAGTGAG 419 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 360 TTCTCTTGGGGCGATGGTGCCGTTATTGGCGGCAGCGTTTGTGAAAGAGTATAAAGTGAG 419 Query 420 GATTGGAGTGATTGTGGCAGCGGTTACGTTGGCGTTAGTGATGTTTGGATGGTTAGGGGC 479 |||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 420 GATTGGTGCAATAGTGGCAGCGGTTACGTTGGCGTTGGTGATGTTTGGATGGTTAGGGGC 479 Query 480 GGTTTTGGGGAAAGCACCGGTGGTTAAGTCGTCGCTTAGGGTTTTGGTTGGAGGATGGTT 539 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GGTTTTGGGGAAAGCACCAGTGGTTAAGTCGTCGCTTAGGGTTTTGGTTGGAGGATGGTT 539 Query 540 AGCTATGGCCATTACGTTTGGTTTTACAAAACTCATTGGGTCACATGGTCATATGTATGT 599 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct 540 AGCTATGGCCATTACGTATGGTTTTACAAAACTCATTGGGTCACATAGTCATATGTATGT 599 Query 600 GTG 602 ||| Sbjct 600 GTG 602 > AT3G43660.1 | Symbols: | Vacuolar iron transporter (VIT) family protein | chr3:15565224-15566047 FORWARD LENGTH=824 Length=824 Score = 798 bits (432), Expect = 0.0 Identities = 545/599 (91%), Gaps = 10/599 (2%) Strand=Plus/Plus Query 11 ACAACACCTTGAACCTAGACATGGAGGAAA-ATCAAGAAAAGGCTTTTGACTACTCCAAA 69 |||||| |||||||||||||||||| |||| ||||||||| | |||| |||||||||||| Sbjct 122 ACAACAACTTGAACCTAGACATGGA-GAAAGATCAAGAAACGACTTTCGACTACTCCAAA 180 Query 70 CGAGCTCAATGGCTACGAGCCGCCGTGCTCGGTGCGAACGACGGTCTAGTCTCGACGGCT 129 ||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| |||||| Sbjct 181 CGAGCTCAATGGCTACGAGCCGCCGTGCTAGGTGCCAACGATGGTCTTGTCTCAACGGCT 240 Query 130 TCACTTATGATGGGTGTTGGTGCGGTCAAGCAAGACGTCAAG-ATCATGATCTTAACTGG 188 ||||||||||||||| |||||||||| |||||||||||| || |||||| ||||||| || Sbjct 241 TCACTTATGATGGGTATTGGTGCGGTGAAGCAAGACGTC-AGAATCATGCTCTTAACCGG 299 Query 189 TTTTGCCGGTTTAGTGGCCGGAGCTTGTAGCATGGCGATCGGAGAGTTTGTCTCCGTTTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 300 TTTTGCCGGTTTAGTGGCCGGAGCTTGTAGCATGGCGATCGGAGAGTTTATCTCCGTTTA 359 Query 249 CTCTCAGTATGACATAGAGGTGGCTCAGATGAagagagagaccggaggagaggtagagaa 308 ||||||||| ||||||||||||||||||||||||||||||| |||||| ||| | |||| Sbjct 360 CTCTCAGTACGACATAGAGGTGGCTCAGATGAAGAGAGAGAGCGGAGGGGAGACAAAGAA 419 Query 309 agagaAACTCCCGAGCCCAACCCAAGCGGCTG-CAGCATCTGCGTTAGCGTTTTCTCTCG 367 |||||| || || || ||||| ||||||||| | || ||||| ||||| ||| |||| | Sbjct 420 AGAGAAGCTTCCAAGTCCAACGCAAGCGGCTATC-GCGTCTGCATTAGCATTTACTCTAG 478 Query 368 GGGCGATGGTGCCGTTATTGGCGGCTGCGTTTGTGAAAGAGTATAAAGTGAGGATTGGAG 427 | ||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 479 GAGCGATTGTGCCGCTATTGGCGGCTGCGTTTGTGAAAGAGTATAAAGTTAGGATTGGAG 538 Query 428 TGATTGTGGCAGCGGTTACGTTGGCGTTAGTGATGTTTGGATGGTTAGGGGCGGTTTTGG 487 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 539 TGATTGTGGCGGCGGTTACATTGGCGTTAGTGATGTTTGGATGGTTAGGGGCGGTTTTGG 598 Query 488 GGAAAGCACCGGTGGTTAAGTCGTCGCTTAGGGTTTTGGTTGGAGGATGGTTAGCTATGG 547 | |||||||| ||||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct 599 GAAAAGCACCAGTGGTTAAGTCGTTGGTTCGGGTTTTGATTGGAGGATGGTTAGCTATGG 658 Query 548 CCATTACGTTTGGTTTTACAAAACTCATTGGGTCACATGGTC----ATATGTATGTGTG 602 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 659 CCATTACGTTTGGTTTTACAAAACTCGTTGGGTCACATGGTCTTTGATATGTATGTGTG 717 > AT1G21140.1 | Symbols: | Vacuolar iron transporter (VIT) family protein | chr1:7404383-7405281 FORWARD LENGTH=899 Length=899 Score = 721 bits (390), Expect = 0.0 Identities = 528/594 (89%), Gaps = 12/594 (2%) Strand=Plus/Plus Query 12 CAACACCTTGAACCTAGACATGGAGGA-AAATCAAGAAAAGGCTTTTGACTACTCCAAAC 70 ||||| |||||||||||||||||| || |||||||||||||||| |||||||||||| Sbjct 102 CAACAGCTTGAACCTAGACATGGA-GATGGATCAAGAAAAGGCTTTCGACTACTCCAAAA 160 Query 71 GAGCTCAATGGCTACGAGCCGCCGTGCTCGGTGCGAACGACGGTCTAGTCTCGACGGCTT 130 |||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||| Sbjct 161 GAGCTCAATGGCTAAGAGCCGCCGTGCTTGGTGCCAACGACGGTCTTGTCTCGACGGCTT 220 Query 131 CACTTATGATGGGTGTTGGTGCGGTCAAGCAAGACGTC-AAGATCATGATCTTAACTGGT 189 |||||||||||||||| |||||||| |||||||||||| ||| ||||||||||| ||||| Sbjct 221 CACTTATGATGGGTGTCGGTGCGGTAAAGCAAGACGTCAAAG-TCATGATCTTATCTGGT 279 Query 190 TTTGCCGGTTTAGTGGCCGGAGCTTGTAGCATGGCGATCGGAGAGTTTGTCTCCGTTTAC 249 || |||||||| || |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 280 TTCGCCGGTTTGGTCGCCGGAGCTTGTAGCATGGCTATCGGAGAGTTTGTCTCCGTTTAC 339 Query 250 TCTCAGTATGACATAGAGGTGGCTCAGATGAagagagagaccggaggagaggtagagaaa 309 |||||||| ||||| ||||||||||| ||||||||||||| ||||||| | || |||||| Sbjct 340 TCTCAGTACGACATCGAGGTGGCTCAAATGAAGAGAGAGAACGGAGGACAAGTGGAGAAA 399 Query 310 gagaAACTCCCGAG-CCCAACCCAAGCGGCTGCAGCATCTGCGTTAGCGTTTTCTCTCGG 368 ||||| || ||||| |||| | |||||||||| || |||||||||||||||||| | || Sbjct 400 GAGAAGCTTCCGAGTCCCATGC-AAGCGGCTGCCGCGTCTGCGTTAGCGTTTTCTTT-GG 457 Query 369 G-GCGATGGTGCCGTTATTGGCGGCTGCGTTTGTGAAAGAGTATAAAGTGAGGATTGGAG 427 | ||||| ||||| ||| |||||||||||||||||||||| ||| | ||||| || |||| Sbjct 458 GTGCGATTGTGCCTTTAATGGCGGCTGCGTTTGTGAAAGACTATCACGTGAGAATAGGAG 517 Query 428 TGATTGTGGCAGCGGTTACGTTGGCGTTAGTGATGTTTGGATGGTTAGGGGCGGTTTTGG 487 ||| ||||| ||||| || |||||||||||||||||||| |||||||| |||||||||| Sbjct 518 CGATCGTGGCGGCGGTGACATTGGCGTTAGTGATGTTTGGGTGGTTAGGAGCGGTTTTGG 577 Query 488 GGAAAGCACCGGTGGTTAAGTCGTCG-CTTAGGGTTTTGGTTGGAGGATGGTTAGCTATG 546 |||||||||||||| ||||||||||| || ||||||||| |||||||||||||||||||| Sbjct 578 GGAAAGCACCGGTGTTTAAGTCGTCGGCT-AGGGTTTTGATTGGAGGATGGTTAGCTATG 636 Query 547 GCCATTACGTTTGGTTTTACAAAACTCATTGGGTCACATGGTCATATG-TATGT 599 ||| |||| |||||||| |||||||| |||||| ||||| ||| | || ||||| Sbjct 637 GCCGTTACTTTTGGTTTGACAAAACTGATTGGGACACATAGTC-TGTGATATGT 689 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28985102819 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5