BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484868
Length=1501
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44560.1 | Symbols: FAR8 | fatty acid reductase 8 | chr3:161... 1705 0.0
AT3G44550.1 | Symbols: FAR5 | fatty acid reductase 5 | chr3:161... 1378 0.0
AT3G44540.1 | Symbols: FAR4 | fatty acid reductase 4 | chr3:161... 545 3e-154
> AT3G44560.1 | Symbols: FAR8 | fatty acid reductase 8 | chr3:16151136-16154397
FORWARD LENGTH=1532
Length=1532
Score = 1705 bits (923), Expect = 0.0
Identities = 1047/1108 (94%), Gaps = 4/1108 (0%)
Strand=Plus/Plus
Query 1 AAAGAAAATCATTTCCTCAGAGTCATAGACCAAAGTCCAAACAATGGAATTCAATTGTGT 60
||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 1 AAAAAAAATCATTTCCTCAGAGT--TAGACCAAAGTCCAAACAATGGAATTCAGTTGTGT 58
Query 61 TCATTTTCTTCAAAACAAGACGATTCTTGTCACAGGAGCAACCGGTTTCCTTGCCAAGGT 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 59 TCATTTTCTTCAAAACAAGACGATTCTTGTCACAGGCGCAACCGGTTTCCTTGCCAAAGT 118
Query 121 TTTTGTGGAGAAAATTTTGAGAGTACAACCAAATGTGAATAAGCTGTACCTCGTGGTGAG 180
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 119 TTTTGTGGAGAAAATATTGAGAGTGCAACCAAATGTGAATAAGCTGTACCTCGTGGTGAG 178
Query 181 AGCATCCGACACTGACGCCGCGACGAAACGCTTACGCACAGAGGCCTTCGAGAAAGATCT 240
||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 179 AGCATCCGACAATGAAGCCGCGACGAAACGCTTACGCACAGAGGCATTCGAGAAAGATCT 238
Query 241 TTTTAAGGTGTTAAGGGAGAGTCTTGGCGATGA-AAATTTCAATACATTGTTGTCCGAAA 299
||| ||||||||||| || | |||||||||||| ||| || |||||||||||||||||||
Sbjct 239 TTTCAAGGTGTTAAGAGATAATCTTGGCGATGAGAAA-TTGAATACATTGTTGTCCGAAA 297
Query 300 AAGTTGTCCCGGTCGCAGGTGATATTGCGATGGATCATTTAGGCATGAAGGACTCTAAAC 359
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 298 AAGTTGTCCCGGTCGCAGGTGATATCGCGATGGATCATTTAGGCATGAAGGACTCTAATC 357
Query 360 TCAGAGAACGTATGCAAAAAGAAATCGATATTGTTGTTAATGTGGCAGCCACAACTAATT 419
| ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||
Sbjct 358 TAAGAGAACGTATGCAAAAAGAAATCGATATTGTTGTCAATGTCGCAGCTACAACTAATT 417
Query 420 TTGACGAGAGATATGATGTTGGTCTTGGAATTAACACATTTGGAGCTCTCAATGTCCTTA 479
| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 418 TCGACGAGAGATATGATATTGGTCTTGGAATAAACACATTTGGAGCTCTCAATGTCCTTA 477
Query 480 ACTTTGCCAAAAAATGTGTTAAAGCTCAATTGCTTCTCCATGTTTCAACTGCTTATGTTT 539
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 ACTTCGCCAAAAAATGTGTTAAAGCTCAATTGCTTCTCCATGTTTCAACTGCTTATGTTT 537
Query 540 GTGGAGAGAAGCCAGGTCTCCTACCTGAAAAACCATTTGTCATGGAAGAGATTCGTAACG 599
| ||||| || ||||||||||||||||||||||| || ||||||||||||||| |||| |
Sbjct 538 GCGGAGAAAAACCAGGTCTCCTACCTGAAAAACCGTTCGTCATGGAAGAGATTTGTAATG 597
Query 600 AGAATGATTTTCAATTGGATATACACCGTGAAAGGGAGCTGATGAAGCAAAGATTGAAAG 659
|||||| | |||||||||||||| ||| |||||||||||||||||| |||||||||||||
Sbjct 598 AGAATGGTCTTCAATTGGATATAAACCTTGAAAGGGAGCTGATGAAACAAAGATTGAAAG 657
Query 660 AACTCAATGAACAAGATTGTTCAGAAGAAGACATTACTCGCGCCATGAAAGAACTCGGCA 719
||||||||||||||| |||||||||||||| || |||| | |||||||||||||||||
Sbjct 658 AACTCAATGAACAAGGTTGTTCAGAAGAAGGCACTACTTTCTACATGAAAGAACTCGGCA 717
Query 720 TGGAAAGGGCAAAGCTTCATGGATGGCCAAACACATATGTTTTCACCAAATCGATGGGAG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TGGAAAGGGCAAAGCTTCATGGATGGCCAAACACATATGTTTTCACCAAATCGATGGGAG 777
Query 780 AGATGCTTCTTGGTAACTACAAAGAAAATCTTCCTCTCGTCATTATCCGCCCCACGATGA 839
||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||
Sbjct 778 AGATGCTTCTTGGTAACCATAAAGAAAATCTTCCTCTCGTCATTATCCGTCCCACGATGA 837
Query 840 TCACTAGCACTCTTTCAGAACCATTTCCTGGTTGGATCGAAGGATTAAGAACTGTAGACA 899
||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||
Sbjct 838 TCACTAGCACTCTTTTTGAACCATTTCCTGGTTGGATTGAAGGACTAAGAACTGTAGACA 897
Query 900 GTGTGATTATTGCTTACGGAAAGGGAGTGCTCAAGTGTTTTCTTGTCGATGTAAACTCGG 959
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 GTGTAATTATTGCGTACGGAAAGGGAGTGCTCAAGTGTTTTCTTGTCGATGTAAACTCGG 957
Query 960 TTTGCGATATGATACCAGCGGATATGGTGGCAAACGCGATGATCACGGCTGCAGCCACAC 1019
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 958 TTTGCGATATGATACCAGCGGATATGGTGGCAAACGCGATGATCGCAGCTGCAGCCACAC 1017
Query 1020 ATGCTGGAGGTTCAAAGGTTCACATGGTGTACCAAGTTGGTTCATCTCGCCAAAACCCAA 1079
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1018 ATGCTGGAGGTTCAAAGGTTCACATGGTGTACCAAGTTGGTTCATCTCACCAAAACCCAA 1077
Query 1080 TAACATATGGAGAGATCCGCGAAATTTT 1107
||| ||||||||||||||| ||||||||
Sbjct 1078 TAATATATGGAGAGATCCGTGAAATTTT 1105
Score = 590 bits (319), Expect = 2e-167
Identities = 371/396 (94%), Gaps = 4/396 (1%)
Strand=Plus/Plus
Query 1108 TCGCAATAGCTCGCTGATAACCGTCTCAAAAATGAAGCTGATACCAACTATGGCTTTGTT 1167
||||||| |||| ||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct 1139 TCGCAATGGCTCAATGATAACTGTCTCGAAAATGAAGCTGATACCAACTCTGGCTTTGTT 1198
Query 1168 CAGCCTCTATATGACCATACGTTACAAACTACCTCTCCAGTTATTAAAATTGGTTGATAT 1227
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1199 CAGCCTCTACATGACCATACGTTACAAACTACCTGTCCAGTTATTAAAATTGGTTGATAT 1258
Query 1228 AATATATCCTTCGAGGAAAGGAGAC-AATTACAAAAACAAGAACCGCAAAATCGGTATGG 1286
|||||||||||||||| |||||||| || ||||||||||| |||||||| |||| |||||
Sbjct 1259 AATATATCCTTCGAGGGAAGGAGACGAA-TACAAAAACAAAAACCGCAAGATCGATATGG 1317
Query 1287 TGATGAGATTGGTAAACCTTTACGAGCCTTACGTACTCTTCAAGGGCATATTCGACGATA 1346
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 TGATGAGATTGGTAAAGCTTTACGAGCCTTACGTACTCTTCAAGGGCATATTCGACGATA 1377
Query 1347 GGAATACTAAAAACTTATGCGCCAACCAGAAAGGAGAGGACAACCA-AAATTCAGAAAAT 1405
||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||||||
Sbjct 1378 GGAATACTAAAAACTTATGCGCCAAGCAGAAAGAAGAGGACAAC-AGAAATTCAGAAAAT 1436
Query 1406 TTGAAGTTTGATTTCGACCCTAAAATCATTAAATGGAGAGATTATCTTATAAATGTACAC 1465
|| | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1437 TTTATGTTTGATTTCGACCCTAAAATCATTAAATGGAAAGATTATCTTATAAATGTACAC 1496
Query 1466 ATTCCTGGCCTCATCATTCACGTGCTTAAAAAATAA 1501
|||||||||||||||| |||||||||||| || |||
Sbjct 1497 ATTCCTGGCCTCATCACTCACGTGCTTAAGAAGTAA 1532
> AT3G44550.1 | Symbols: FAR5 | fatty acid reductase 5 | chr3:16138017-16141546
FORWARD LENGTH=1671
Length=1671
Score = 1378 bits (746), Expect = 0.0
Identities = 966/1074 (90%), Gaps = 8/1074 (1%)
Strand=Plus/Plus
Query 26 TAGACCAAAGTCCAAACAATGGAATTCAATTGTGTTCATTTTCTTCAAAACAAGACGATT 85
|||||||||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||
Sbjct 26 TAGACCAAAGTCCAGACAATGGAACTCAATTGTGTTCAATTTCTTCGAAACAAGACGATT 85
Query 86 CTTGTCACAGGAGCAACCGGTTTCCTTGCCAAGGTTTTTGTGGAGAAAATTTTGAGAGTA 145
|||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 86 CTTGTCACCGGAGCTACCGGTTTCCTTGCGAAGGTTTTTGTGGAGAAAATTCTGAGAGTG 145
Query 146 CAACCAAATGTGAATAAGCTGTACCTCGTGGTGAGAGCATCCGACACTGACGCCGCGACG 205
|||||||||||||| ||||||||||| ||||||||||||| |||| ||| || || ||
Sbjct 146 CAACCAAATGTGAAGAAGCTGTACCTTTTGGTGAGAGCATCTGACAATGAAGCTGCCACT 205
Query 206 AAACGCTTACGCACAGAGGCCTTCGAGAAAGATCTTTTTAAGGTGTTAAGGGAGAGTCTT 265
||||||||||||||||||| || |||||||| ||||||||||| || || ||| ||||
Sbjct 206 AAACGCTTACGCACAGAGGTATTTGAGAAAGAACTTTTTAAGGTATTGAGACAGAATCTT 265
Query 266 GGCGATGA-AAATTTCAATACATTGTTGTCCGAAAAAGTTGTCCCGGTCGCAGGTGATAT 324
|||||||| ||| || ||||||||||||| |||||||||||| ||||| | ||||||||
Sbjct 266 GGCGATGAGAAA-TTAAATACATTGTTGTACGAAAAAGTTGTTTCGGTCCCGGGTGATAT 324
Query 325 TGCGA-TGGATCATTTAGGCATGAAGGACTCTAAACTCAGAGAACGTATGCAAAAAGAAA 383
|||| | ||||| |||||||| || |||||| | || ||||||||||||||||||||||
Sbjct 325 AGCGACT-GATCAATTAGGCATAAATGACTCTCATCTTAGAGAACGTATGCAAAAAGAAA 383
Query 384 TCGATATTGTTGTTAATGTGGCAGCCACAACTAATTTTGACGAGAGATATGATGTTGGTC 443
| ||||||||||| ||||| ||||||||||| || |||||||| |||||||||||||| |
Sbjct 384 TAGATATTGTTGTCAATGTTGCAGCCACAACAAACTTTGACGAAAGATATGATGTTGGGC 443
Query 444 TTGGAATTAACACATTTGGAGCTCTCAATGTCCTTAACTTTGCCAAAAAATGTGTTAAAG 503
|||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 444 TTGGGATCAATACATTTGGAGCTCTCAACGTCCTTAACTTTGCCAAAAAATGTGTTAAAG 503
Query 504 CTCAATTGCTTCTCCATGTTTCAACTGCTTATGTTTGTGGAGAGAAGCCAGGTCTCCTAC 563
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||
Sbjct 504 TTCAATTGCTTCTCCATGTCTCAACTGCTTATGTTTGTGGAGAAAAGCCAGGTCTCATAC 563
Query 564 CTGAAAAACCATTTGTCATGGAAGAGATTCGTAACGAGAATGATTTTCAATTGGATA-TA 622
||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||
Sbjct 564 CTGAAAAACCATTCATCATGGAAGAGATTCGTAACGAGAATGGTCTTCAATTGGATATTA 623
Query 623 CACCGTGAAAGGGAGCTGATGAAGCAAAGATTGAAAGAACTCAATGAACAAGATTGTTCA 682
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 624 -ACCTTGAAAGGGAGCTTATGAAGCAAAGATTGAAAGAACTCAATGAACAAGATTGTTCC 682
Query 683 GAAGAAGACATTACTCGCGCCATGAAAGAACTCGGCATGGAAAGGGCAAAGCTTCATGGA 742
|||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||
Sbjct 683 GAAGAAGACATTACTCTTTCCATGAAAGAACTCGGAATGGAAAGGGCCAAGCTTCATGGA 742
Query 743 TGGCCAAACACATATGTTTTCACCAAATCGATGGGAGAGATGCTTCTTGGTAA-CTACAA 801
||||| ||||||||||||||||||||||| |||||||| |||||||||||||| | | ||
Sbjct 743 TGGCCTAACACATATGTTTTCACCAAATCAATGGGAGAAATGCTTCTTGGTAAGC-ATAA 801
Query 802 AGAAAATCTTCCTCTCGTCATTATCCGCCCCACGATGATCACTAGCACTCTTTCAGAACC 861
||||||||| || |||||||| ||||| ||||||||||||||||| |||||||| |||||
Sbjct 802 AGAAAATCTCCCCCTCGTCATCATCCGTCCCACGATGATCACTAGTACTCTTTCGGAACC 861
Query 862 ATTTCCTGGTTGGATCGAAGGATTAAGAACTGTAGACAGTGTGATTATTGCTTACGGAAA 921
|||||||||||||||||||| || |||||||| ||||| ||||||||||| || |||||
Sbjct 862 TTTTCCTGGTTGGATCGAAGGCTTGAGAACTGTCGACAGCGTGATTATTGCATATGGAAA 921
Query 922 GGGAGTGCTCAAGTGTTTTCTTGTCGATGTAAACTCGGTTTGCGATATGATACCAGCGGA 981
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||
Sbjct 922 GGGAGTGCTCAAGTGTTTTCTTGTCGATGTTAACTCGGTCTGCGATATGATACCAGTGGA 981
Query 982 TATGGTGGCAAACGCGATGATCACGGCTGCAGCCACACATGCTGGAGGTTCAAAGGTTCA 1041
||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||
Sbjct 982 TATGGTGGCAAACGCAATGATCACGGCTGCAGCCAAACACGCTGGAGGTTCAGGGGTTCA 1041
Query 1042 CATGGTGTACCAAGTTGGTTCATCTCGCCAAAACCCAATAACATATGGAGAGAT 1095
|||||||||||| || || ||||||| ||| |||||| | |||| |||||||||
Sbjct 1042 CATGGTGTACCATGTCGGCTCATCTCACCAGAACCCAGTCACATTTGGAGAGAT 1095
Score = 399 bits (216), Expect = 3e-110
Identities = 335/392 (85%), Gaps = 10/392 (3%)
Strand=Plus/Plus
Query 1108 TCGCAATAGCTCGCTGATAACCGTCTCAAAAATGAAGCTGATACCAACTATGGCTTTGTT 1167
||||||| |||| || ||||||||||||||| ||| | | |||||||| |||||||||||
Sbjct 1141 TCGCAATGGCTCACTCATAACCGTCTCAAAAGTGAGGTTCATACCAACCATGGCTTTGTT 1200
Query 1168 CAGCCTCTATATGACCATACGTTACAAACTACCTCTCCAGTTATTAAAATTGGTTGATAT 1227
||||||||| |||||| |||||||||||||||||||||||||||||||| | ||||| ||
Sbjct 1201 CAGCCTCTACATGACCCTACGTTACAAACTACCTCTCCAGTTATTAAAACTAGTTGACAT 1260
Query 1228 AATATATCCTTCGAGGAAA-GGAGACAATTACAAAAACAAGAACCGCAAAATCG-GTATG 1285
||||||||||| ||| ||| ||||| || || | |||||||||||||||||| || ||
Sbjct 1261 AATATATCCTTGGAG-AAACGGAGATAAATATGGAGACAAGAACCGCAAAATCGAGT-TG 1318
Query 1286 GTGATGAGATTGGTAAACCTTTACGAGCCTTACGTACTCTTCAAGGGCATATTCGACGAT 1345
||||||||||||||| | ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct 1319 GTGATGAGATTGGTAGAGCTTTATGAGCCTTATGTACTCTTCAAGGGAATATTCGACGAT 1378
Query 1346 AGGAATACTAAAAACTT-ATGCGCCAACCAGAAAGGA-GAGGACAACCAAAATTCAGAAA 1403
|| ||||| ||| | || |||||| |||||||| ||| ||||| | | ||||| ||||||
Sbjct 1379 AGAAATAC-AAAGAGTTTATGCGCAAACCAGAA-GGAAGAGGAGATCAAAAATACAGAAA 1436
Query 1404 ATTTGAAGTTTGATTTCGACCCTAAAATCA-TTAAATGGAGAGATTATCTTATAAATGTA 1462
| |||| ||||||||||||||| |||| | |||| ||| |||||||||| | |||| ||
Sbjct 1437 AATTGATGTTTGATTTCGACCC-AAAAGGAATTAATTGGGGAGATTATCTCACAAATATA 1495
Query 1463 CACATTCCTGGCCTCATCATTCACGTGCTTAA 1494
|||||| |||| ||| ||| |||||||||||
Sbjct 1496 CACATTTCTGGACTCGTCACACACGTGCTTAA 1527
> AT3G44540.1 | Symbols: FAR4 | fatty acid reductase 4 | chr3:16124021-16127954
FORWARD LENGTH=1725
Length=1725
Score = 545 bits (295), Expect = 3e-154
Identities = 825/1074 (77%), Gaps = 63/1074 (6%)
Strand=Plus/Plus
Query 42 CAATGGAATTCAATTGTGTTCATTTTCTTCAAAACAAGACGATTCTTGTCACAGGAGCAA 101
||||||| | |||||| |||| || || || ||||||||||||| ||||| || |
Sbjct 57 CAATGGACTCCAATTGCATTCAGTTCCTCCATGACAAGACGATTCTCGTCACCGGTGTTC 116
Query 102 CCGGTTTCCTTGCCAAGGTTTTTGTGGAGAAAATTTTGA-GAGTACAACCAAATGTGAAT 160
|||||||||| ||||| || |||||||||||||| |||| || | |||||||| || ||
Sbjct 117 CCGGTTTCCTCGCCAAAGTGTTTGTGGAGAAAATATTGAGGA-TTCAACCAAAGGTAAAG 175
Query 161 AAGCTGTACC-TCGTGGTGAGAGCATCCGACACTGACGCCGCGACGAAACGCTTACGCAC 219
||||| | || || | |||||||| | |||| ||| | || | | |||| || | ||
Sbjct 176 AAGCTTTTCCTTC-TTTTGAGAGCAGCAGACAATGAATCAGCCATGCAACGGTTTCACAG 234
Query 220 AGAGGCCTTCGAGAAAGATCTTTTTAAG-GTGTTAAGGGAGA-GTC-TT-GGCGATGAAA 275
|||| || ||||||||||||||| || ||||| | | | | | || || ||||| |
Sbjct 235 TGAGGTTTTGGAGAAAGATCTTTTT-AGAGTGTT--GAAAAACG-CTTTAGGTGATGAGA 290
Query 276 ATTTCAATA-CATTGTTGTCCGAAAAAGTTGT-CCCGGTCGCAGGTGATAT-TGCGATGG 332
|| | || | | || | | |||||||| || || || | |||||||| | || | |
Sbjct 291 ATCTGAA-AGCTTTCATAACAGAAAAAGTCGTACCTATTC-CCGGTGATATATCCG-TTG 347
Query 333 ATCATTTAGGCA-TGAAGGACTCTAAACTCAGAGAACGTATGCAAAAAGAAATCGATATT 391
|| |||| || | |||||| ||| | ||| | ||| |||| || || || |||||
Sbjct 348 ATAATTT-GGGAGTGAAGGGTTCTGATCTCTTACAACATATGTGGAATGAGATTGATATC 406
Query 392 GTTGTTAATGTGGCAGCCACAACTAATTTTGACGAGAGATATGATGTTGGTCTTGGAATT 451
|||| ||||| || |||||||| || ||||| || |||||||||||||||||| | |
Sbjct 407 ATTGTCAATGTAGCCGCCACAACGAACTTTGATGAAAGATATGATGTTGGTCTTAGCGTC 466
Query 452 AACACATTTGGAGCTCTCAATGTCCTTAACTTTGCCAAAAAATGTGTTAAAGCTCAATTG 511
|||||||||||| | ||||||||||| ||||||||||| || |||||||||| || |||
Sbjct 467 AACACATTTGGACCGCTCAATGTCCTCAACTTTGCCAAGAAGTGTGTTAAAGGACAGTTG 526
Query 512 CTTCTCCATGTTTCAACTGCTTATGTTTGTGGAGAGAAGCCAGGTCTCCTACCTGA-AAA 570
||||| ||||||||||| || ||||| | ||||||||| | || || ||| ||| |||
Sbjct 527 CTTCTTCATGTTTCAACCGCGTATGTGCGCGGAGAGAAGTCTGGACTTTTACATGAGAAA 586
Query 571 ACCATTTGTCAT--GGAAGAGATTCGTAACGAGAATGATTTTCAATT-G-GATAT-ACAC 625
| ||||| ||| || ||| ||| | |||| | | || |||| | || | | ||
Sbjct 587 A-CATTTCACATGGGGGAGACATT-G-AACG-G-A-CATAGAAAATTAGTCAT-TGAGAC 639
Query 626 CGTGAAAGGGAGCTGATGAAGCAAAGATTGAAAGAACTCA-ATG-AACAAGATTGTTCAG 683
| |||| |||||| ||||| |||| | ||||||| || | | | ||||| |||||||||
Sbjct 640 C--GAAATGGAGCTAATGAAACAAAAACTGAAAGAGCT-ACA-GAAACAAAATTGTTCAG 695
Query 684 AAGAAGACATTACTCGC-G-CCATGAAAGAACTCGGCATGGAAAGGGCAAAGCTTCATGG 741
||||||| ||| || | | | |||||||| || || ||| ||||||||||||||||||
Sbjct 696 AAGAAGAGATT--TCACAGTCTATGAAAGATCTTGGAATGTCAAGGGCAAAGCTTCATGG 753
Query 742 ATGGCCAAACACATATGT-TTTCACCAAATCGATGGGAGAGATGCTTCTTGGTAACTACA 800
|||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| || |
Sbjct 754 ATGGCCAAACACATATGTGTTT-ACCAAATCAATGGGAGAGATGCTTCTTGGTAATTATA 812
Query 801 AAGAAAATCTTCCTC-TCGTCATTATCCGCCCCACGATGATCACTAGCACTCTTTCAGAA 859
|||||| ||||| | |||| || ||||| ||||| ||||||||||||||| ||||||||
Sbjct 813 GAGAAAACCTTCC-CATCGTTATCATCCGTCCCACAATGATCACTAGCACTTTTTCAGAA 871
Query 860 CCATTTCCTGGTTGGATCGAAGGATTAAGAACTGTAGACAGTGTGATTATTGCTTACGG- 918
|||||||| |||||||||||||| |||||||| |||||||||||||| |||| || ||
Sbjct 872 CCATTTCCCGGTTGGATCGAAGGGTTAAGAACCATAGACAGTGTGATTGTTGCATATGGC 931
Query 919 AAAGGGAGTGCTCAAGTGTTTTCTTGTC-GATGTAAACTCGGT--TTGCGATATGATACC 975
||||| || ||| || |||||||||| | ||| |||||| || ||| || | |||||
Sbjct 932 AAAGGAAG-GCTTAAATGTTTTCTTG-CAGATCCAAACTCAGTCCTTG--ATCTTATACC 987
Query 976 AGCGGATATGGTGGCAAACGCGATGATCACGGCTGCAGCCACACATGCTGG-AGGTTCAA 1034
| ||| ||||| |||||||| ||| |||||||||| || | ||| || || | | | |
Sbjct 988 TGTGGACATGGTCGCAAACGCAATGGTCACGGCTGCGGCAATACACGCAGGGAAGCT-A- 1045
Query 1035 AGGTTCACATG---GTGTACCAAGTTGGTTCATCTCGCCAAAACCCAATAACAT 1085
||||| || | |||||||| || || |||||| | ||||||| || ||||
Sbjct 1046 -GGTTCCCA-GACCGTGTACCATGTCGGATCATCTTGTAAAAACCCGATCACAT 1097
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74045803875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5