BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484875 Length=204 Score E Sequences producing significant alignments: (Bits) Value AT3G44718.1 | Symbols: | Plant thionin family protein | chr3:1... 311 2e-84 > AT3G44718.1 | Symbols: | Plant thionin family protein | chr3:16266111-16266314 REVERSE LENGTH=204 Length=204 Score = 311 bits (168), Expect = 2e-84 Identities = 194/206 (94%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 1 ATGACAAAATGGAATGTAG-TAATGGTAATATTGTTGGTGATGATTGCTGCGATAGGAGT 59 |||||||||| |||||| | ||||||||||||||||||||||||||||||| ||||||| Sbjct 1 ATGACAAAATCGAATGT-GATAATGGTAATATTGTTGGTGATGATTGCTGCAATAGGAGG 59 Query 60 AGAAGCAAGACATAAACATAGAAAGACTTGGATAGGTTGCTTTCGGTATTGTTCTCGCA- 118 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 60 AGAAGCACGACATAAACATAGAAAGACTTGGATAGGTTGCTTTAGGTATTGTTCTCGCAG 119 Query 119 CTTGCAGCGAGTACGATGGAATTTGCTTTGAAGATTGTAAGATCAAATGTGGTGGTCCTA 178 | || |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 120 C-TGTAGCGAGTACGATGGAAATTGCTTTGAACATTGTAAGATCAAATGTGGTGGTCCTA 178 Query 179 CTCCTCCAAAAACTAATTCAAGGTAG 204 |||||||||||||||||||||||||| Sbjct 179 CTCCTCCAAAAACTAATTCAAGGTAG 204 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9104544531 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5