BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg484897 Length=1853 Score E Sequences producing significant alignments: (Bits) Value AT3G45040.1 | Symbols: | phosphatidate cytidylyltransferase fa... 2900 0.0 > AT3G45040.1 | Symbols: | phosphatidate cytidylyltransferase family protein | chr3:16472662-16475753 REVERSE LENGTH=1900 Length=1900 Score = 2900 bits (1570), Expect = 0.0 Identities = 1760/1854 (95%), Gaps = 3/1854 (0%) Strand=Plus/Plus Query 1 TAAAACAACAAATCTCCGGCGAAATCATCATCATCTCCGGCGATGAAGACGACGGCGACG 60 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 10 TAAAACAACGAATCTCCGGCGAAATCATCATCTTCTCCGGCGATGAAGACGACGGCGACG 69 Query 61 TCGTTTGTAACAGGAGAGAGAGTTGTAG-TAGCAGTCGTGGTTtctcgtattctcttatc 119 ||||||||||| |||||||||||||||| | | |||||||||||||||||||||||||| Sbjct 70 TCGTTTGTAACGGGAGAGAGAGTTGTAGTTTTC-GTCGTGGTTTCTCGTATTCTCTTATC 128 Query 120 tctccctctatcacttatctcccatggcttctccctcttcctcctctctctctccgcctt 179 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129 TCTTCCTTTATCACTTATCTCCCATGGCTTCTCCCTCTTCCTCCTCTCTCTCTCCGCCTT 188 Query 180 cctcatcgagatccgcgccgagacttctccgtttcttctctctcGTTTCAGCTCCAGACG 239 |||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 189 CCTCGTCGAGATCCGCGTCGAGACTTCTCCGTTTCTTCTCTCTCATTTCAGCTCCAGACG 248 Query 240 TGGTGCTTCTTCAGGGATATTATTAGGAGCTGTAACACTTCCTTCTGTTATGATTTCTAA 299 ||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||| Sbjct 249 CGGTGCGTCTTCAGGGATATTACTAGGAGCTGTGACACTTCCTTCTGTTATGATATCTAA 308 Query 300 GTTGGTTCAGCTTTCAAGAGCTATCTCAATCCATGAAGCTGAACAAGATGAGCTTGCACA 359 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 309 GTTAGTTCAGCTTTCAAGAGCTATTTCAATCCATGAAGCTGAACAAGATGAGCTTGCACA 368 Query 360 TGTGACAATGCAGTATTGGGCAGCATCGGCTAGTTGTTGTGCTATACTTATATATCTATC 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 TGTGACAATGCAGTATTGGGCAGCATCGGCTAGTTGTTGTGCTATACTTATATATCTATC 428 Query 420 AGTGATTATGTCACAAGCGAGAAATGCTGAATCTTTGTCATCGTCGTCTGTTTGGCTTAT 479 ||||||||||||||||| |||||| | |||||||||||| || |||||| ||||||||| Sbjct 429 AGTGATTATGTCACAAGTGAGAAAAGATGAATCTTTGTCGTCATCGTCTATTTGGCTTAC 488 Query 480 GAGAGTTAGCTTGACTGGGACAGTGTTGTATGGAGTAGCATGTTTTGTCTCACTTTCCAT 539 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 489 GAGAGTTAGCTTGACTGGGACAGTGTTGTATGGAGTAGCATGTTTTGTTTCACTTTCCAT 548 Query 540 GATTTCACACACTGGTTTGAATACTTCATTGAAAATGTTGTGGATGTTATTTCACGGCCT 599 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| || || Sbjct 549 GATTTCACACACTGGCTTGAATACGTCATTGAAAATGTTGTGGATGTTATTTCATGGACT 608 Query 600 TGCAGCTTTGAAGTTAATTCAACATTTGCTTTGCACCTTCCCTTCTTGTGCTTCAATCGG 659 ||||||| ||||||| |||| ||||||||||||||| ||||| || |||||||| || || Sbjct 609 TGCAGCTGTGAAGTTGATTCGACATTTGCTTTGCACTTTCCCATCGTGTGCTTCGATAGG 668 Query 660 GGAAGCGCTTCTTGTGACTAGTGGTCTTGTTCTATATTTTGGCGACTTTTTGGCATGCAC 719 |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 669 GGAAGCACTTCTTGTGACCAGTGGTCTTGTTCTCTATTTTGGCGACTTTTTGGCATGCAC 728 Query 720 AATTGCAAAGATTTTCGAGAAATTGATACCTGTAGATCTTGTCTCAATAAGCTATGGAAT 779 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 729 AATTGCAAAGATTTTTGAGAAATTGATACCTGTGGATCTTGTCTCAATAAGCTATGGAAT 788 Query 780 AAGGAGGACTGAAACCGGCATAATCGTCCAGGGTCTGCTGTTGGGCCTTCTACTTTTCCC 839 || ||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 789 AAAGAGAACGGAAACCGGCATAATCGTTCAGGGTCTACTGTTGGGCCTTCTACTTTTCCC 848 Query 840 GATAGTGTTCAGAATCGTTCTGCATATATATGAAAGCTCCTTGAGAAAGAGAGATGCTCG 899 ||| ||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 849 GATGGTGTTTAGATTTGTTCTGCATATATATGAAAGCTCTTTGAGAAAGAGAGATGCTCG 908 Query 900 ACAAAGAAACTGCAGTGATACTGCAAAATCTATCTTATTCTTTGTTTCACTTCTATTTTT 959 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 909 ACAAAGAAACTGCAGTGATGCTGCAAAATCTGTCTTATTCTTTGTTTCACTTCTATTTTT 968 Query 960 TATGATCGTGACTGTTCCTTCTTGGATGCAGTTTGTACACGATTTCGACCAGCATCCCTT 1019 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 969 TATGGTCGTGGCTGTTCCTTCTTGGATGCAGTTTGTACACGATTTCAACCAGCATCCCTT 1028 Query 1020 CTTATGGGTACTCACATTTGTCTTTTCTGAACCTCTGAAGAGACTTTCATTATGTATCTA 1079 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1029 CTTATGGGTGCTCACATTTGTCTTTTCTGAACCTCTGAAGAGACTTTCATTATGTATCTA 1088 Query 1080 CTGGGTTCTGTTGATCGTTGTGTCTGTCTCACGATTTTATAACATCTCGAGGAGTAGCAA 1139 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1089 CTGGATTCTGTTGATCGTTGTGTCTGTCTCACGATTTTATAACATCTCGAGGAGTAGCAA 1148 Query 1140 GGTTGAGAGAATCTTGCTTCGGAAGTACTACCATCTGATGGCTGTTTTAATGTTTTTGCC 1199 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1149 GGTTGAGAGAATCTTGCTTCGGAAGTACTACCATCTGATGGCTGTTTTAATGTTCTTGCC 1208 Query 1200 AGCTCTTGTGTTACAGCCTAAATTTCTCGATCTAGCATTTGGTGCTGCATTGGCGGTATT 1259 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 1209 AGCTCTTGTCTTACAGCCTAAATTTCTCGATCTAGCATTTGGTGCAGCATTGGCAGTATT 1268 Query 1260 TGTTGTATTGGAGATCATTCGAATCTGGAGAATTCAGCCGCTTGGAGAGCCTTTACATCA 1319 ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1269 TGTTGCATTGGAGATCATTCGAATATGGAGAATTCAGCCTCTTGGAGAGCCTTTACATCA 1328 Query 1320 ATTCATGAATGCTTTCACGGACCATCGTGACTCAGAGCATCTGATTGTCAGCCACTTCTC 1379 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1329 ATTCATGAATGCTTTCACTGACCATCGTGACTCAGAGCATCTGATTGTCAGCCACTTCTC 1388 Query 1380 ACTCTTGCTTGGGTGTGCGCTTCCAATTTGGATGTCATCTGGGTTCAATGACCGAGCTTT 1439 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1389 ACTCTTGCTTGGGTGTGCGCTTCCGATTTGGATGTCATCTGGGTTCAATGACCGAGCCTT 1448 Query 1440 ATCCCCATTTGCCGGAATTCTCAGCCTCGGGATTGGAGATACAATGGCATCGATGGTTGG 1499 ||| |||||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 1449 ATCTCCATTTGCTGGAATTCTCAGCCTAGGAATTGGAGATACAATGGCATCGATGGTTGG 1508 Query 1500 GCACAAGTATGGGGTGTTGAGATGGAGCAAGACAGGAAAGAAAACGGTTGAAGGAACAGC 1559 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1509 TCACAAATATGGGGTGTTGAGATGGAGCAAGACAGGAAAGAAAACGGTTGAAGGAACAGC 1568 Query 1560 AGCGGGAATAACATCGGTGATGGCAGTGTGCTTTGTACTGGTCCCAGTATTAGCATCAAT 1619 |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| Sbjct 1569 AGCGGGAATAACATCGATGATGGCAGTGTGCTTTGTTCTGGTCCCAATATTAGCATCAAT 1628 Query 1620 GGGTTATATACTAAGTCAAGGATGGTGGTCGCTTCTGGTTGCTGTGACAGCCACCGGGAT 1679 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1629 GGGTTATATACTAAGTCAAGGATGGTGGTCGCTTCTGGTGGCTGTGACAGCCACCGGGAT 1688 Query 1680 GTTGGAAGCTTACACCGCACAGTTAGACAATGCCTTTATACCTCTTGTCTACTACTCACT 1739 ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1689 GTTGGAAGCTTACACGGCGCAGTTAGACAATGCCTTTATACCTCTTGTCTTCTACTCACT 1748 Query 1740 CCTCTGTTTGTAG-TAAGTTAAGCCTAGAGTCATCATTCTTCGTTTTTCCACTTAATGTA 1798 |||||| ||||| | ||||||||||||||||| |||||| ||||||| ||||| ||||| Sbjct 1749 CCTCTGCTTGTAAATTAGTTAAGCCTAGAGTCAACATTCTACGTTTTTTCACTTCATGTA 1808 Query 1799 CATAACAAAGTATCTTACTACTAACCACACTTCCTCTTGTTAATTGCCATATCT 1852 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 1809 CATAACAAAGTATCTTACTACTAACCATACTTCCTCTTGTTAATTGCCGTATCT 1862 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91716395715 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5