BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484914
Length=878
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 433 2e-120
AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 433 2e-120
AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 427 8e-119
AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 416 2e-115
AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 414 6e-115
AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 412 2e-114
AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 405 4e-112
AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 394 8e-109
AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 385 5e-106
AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 379 2e-104
AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 379 2e-104
AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 368 5e-101
AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 368 5e-101
AT5G40110.1 | Symbols: | transposable element gene | chr5:1604... 351 5e-96
AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 329 2e-89
AT3G45120.1 | Symbols: | transposable element gene | chr3:1651... 259 3e-68
AT4G05584.1 | Symbols: | transposable element gene | chr4:2864... 200 2e-50
AT2G16820.1 | Symbols: | transposable element gene | chr2:7290... 174 1e-42
AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 124 1e-27
AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 86.1 5e-16
AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 80.5 2e-14
AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 80.5 2e-14
AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 76.8 3e-13
AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 76.8 3e-13
AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 75.0 1e-12
AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 75.0 1e-12
AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 75.0 1e-12
AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 65.8 7e-10
> AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681
FORWARD LENGTH=1059
Length=1059
Score = 433 bits (234), Expect = 2e-120
Identities = 277/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||||||| |||||||||||| || ||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| || ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCT 179
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 351 bits (190), Expect = 5e-96
Identities = 335/399 (84%), Gaps = 34/399 (9%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||| ||||||| |||||||||||||||| |||| ||||||||||||||||||| |||
Sbjct 564 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACACTGATAATCATCATACCCATCAC 506
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||||||||| | || || | |||||||||||||||||||||||||||||| |||||
Sbjct 505 CATCTTCGTTGT-C-CC-CC-CAACTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 450
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACGG 684
|||||| ||||||||||||||||||| |||| |||||| || |||| || |||||||||
Sbjct 449 CTTGCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCA-CACACACGG 391
Query 685 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGT 734
| | | | || ||||||| | ||||||| |||| |||||||||||| |||||||||
Sbjct 390 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGT 332
Query 735 TGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T 790
||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 331 TGTAATGAAAGAGACAAACAAATTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGT 272
Query 791 --C--A---T---TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTG 840
| | | |||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct 271 ATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTA 212
Query 841 ACATCTTTCCCGGCATCCAGTAACTAATTATTG-GATTG 878
|||||| |||||| ||||| ||||||||||| | |||||
Sbjct 211 ACATCTCTCCCGGTATCCATTAACTAATTAT-GAGATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 405 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 464
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 784
Query 465 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 506
|||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 783 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGTTGACTTGTG 733
> AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230
FORWARD LENGTH=1057
Length=1057
Score = 433 bits (234), Expect = 2e-120
Identities = 277/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||| |||
Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| || ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCT 179
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806
Query 240 CGTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748
Score = 355 bits (192), Expect = 4e-97
Identities = 336/399 (84%), Gaps = 35/399 (9%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 561 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 503
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCG 624
|||||||||||| | || || | ||||||||||||||||||||||||||||||| | |||
Sbjct 502 CATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCG 448
Query 625 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACG 683
|||| || ||||| ||||||||||||| |||| |||||| || |||| || ||||||||
Sbjct 447 TCTTACTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCA-CACACACG 389
Query 684 GT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGG 733
|| | | | || ||||||| | ||||||| |||| |||||||||||| ||||||||
Sbjct 388 GTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGG 330
Query 734 TTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C- 789
||||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 329 TTGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCG 270
Query 790 T--C--A---T---TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACT 839
| | | | |||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct 269 TATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACT 210
Query 840 GACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
|||||| ||||| ||||||||||||||||| ||||||
Sbjct 209 AACATCTCTCCCGT-ATCCAGTAACTAATTATGGGATTG 172
Score = 102 bits (55), Expect = 5e-21
Identities = 94/111 (85%), Gaps = 9/111 (8%)
Strand=Plus/Minus
Query 405 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 464
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 841 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 782
Query 465 CGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 506
|||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 781 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 731
> AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845
REVERSE LENGTH=1089
Length=1089
Score = 427 bits (231), Expect = 8e-119
Identities = 276/298 (93%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||| |||||||||||| |||||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| || ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCT 179
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 357 bits (193), Expect = 1e-97
Identities = 335/398 (84%), Gaps = 32/398 (8%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 564 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-CGTCG 624
|||||||||||| | || || | ||||||||||||||||||||||||||||||| | |||
Sbjct 505 CATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC-TCG 451
Query 625 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACG 683
||||||| ||||| ||||||||||||| |||| |||||| || |||| || ||||||||
Sbjct 450 TCTTGCTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCA-CACACACG 392
Query 684 GTAACTCTCACCATCG-------G--TCCTAGGGACAGTATTCCCGAGTGCCTTGACGGT 734
|| ||| ||| ||||| | |||||| |||| |||||||||||| |||||||||
Sbjct 391 GTCACTTTCAGCATCGTCACCATGACTCCTAGAGACATTATTCCCGAGTGTCTTGACGGT 332
Query 735 TGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T 790
|||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 331 TGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGT 272
Query 791 --C--A---T---TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTG 840
| | | |||| | |||||||||||||||||||||||| | ||||||||||||
Sbjct 271 ATCCCACCCTCACTTGACTCTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTA 212
Query 841 ACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
|||||| |||||| ||||||||||||||||| ||||||
Sbjct 211 ACATCTCTCCCGGTATCCAGTAACTAATTATGGGATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 65/70 (93%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 405 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 464
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 843 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 784
Query 465 CGGTCAACCG 474
|||||| |||
Sbjct 783 CGGTCACCCG 774
> AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729
REVERSE LENGTH=1147
Length=1147
Score = 416 bits (225), Expect = 2e-115
Identities = 275/299 (92%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||| | |||||||||| |||||||| |||||||| |||
Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| || ||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCT 179
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868
Query 240 CGT-CTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810
Score = 350 bits (189), Expect = 2e-95
Identities = 333/398 (84%), Gaps = 28/398 (7%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||| ||||||| ||| |||||||||||| |||||||||||||||||||||||| |||
Sbjct 623 GATCGATGGTACTT-CCCTCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 565
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||||||||||| || || | ||||||||||||||||||||||||||||||| |||||
Sbjct 564 CATCTTCGTTGTCCCCCCCCCCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 505
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACGG 684
||| || ||||||||||||||||||| |||| |||||| || |||| || |||||||||
Sbjct 504 CTTCCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCA-CACACACGG 446
Query 685 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGT 734
| | | | || ||||||| | ||||||| |||| |||||| ||||| |||||| ||
Sbjct 445 TCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCTGAGTGTCTTGACAGT 387
Query 735 TGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAAC-T--- 790
|||||||| ||||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 386 TGTAATGATAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATTGT 327
Query 791 --C--A---T---TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTG 840
| | | |||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct 326 ATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTA 267
Query 841 ACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
|||||| || ||| ||||||||||||||||| ||||||
Sbjct 266 ACATCTCTCTCGGTATCCAGTAACTAATTATGGGATTG 229
Score = 97.1 bits (52), Expect = 2e-19
Identities = 94/112 (84%), Gaps = 11/112 (10%)
Strand=Plus/Minus
Query 405 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGTGT 463
||||||||||||||||||||||||||||||||| || || ||||||||||| | ||||||
Sbjct 903 GTGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGTGT 845
Query 464 ACGGTCAACCG----AG---T-T-ATCTCCCCCACGTACACGATGACTTGTG 506
||||||| ||| || | | |||||| ||| ||||||| |||||||||
Sbjct 844 ACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTG 793
> AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046
REVERSE LENGTH=1043
Length=1043
Score = 414 bits (224), Expect = 6e-115
Identities = 269/291 (92%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||||||| ||||||| |||| |||||||| |||||||| |||
Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| | ||||||||||||| || ||||||||||||||||||||||||||| |||||||
Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCTC 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851
Query 181 TTAAAAACACT-CTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 850 TTAAAAATACTCCT-CAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792
Query 240 CGTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290
| |||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741
Score = 357 bits (193), Expect = 1e-97
Identities = 336/399 (84%), Gaps = 34/399 (9%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCA-TCACCCTGATAATCATCATACCCAGCA 564
|||||||||||||| | ||||||||||||| | |||||||||||||||||||||||| ||
Sbjct 547 GATCGAGGGTACTT-CTCCCATAGATCCAT-AGTCACCCTGATAATCATCATACCCATCA 490
Query 565 CCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 624
|||| |||||||| | || |||| | |||||| |||||||||||| ||||||||||||||
Sbjct 489 CCATTTTCGTTGT-C-CC-CCTCCTATTCATCTTCATCTGTTTTACCGTCTTCAACGTCG 433
Query 625 TCTTGCTCATCTACG-GCCTCATTATTTCCATCTACATTTGAAGCACT-CCAACACACAC 682
||||||||||||| | |||||||||||| |||| ||||||||| |||| | |||||||
Sbjct 432 TCTTGCTCATCTA-GCGCCTCATTATTTTCATCAACATTTGAAACACTATC-ACACACAT 375
Query 683 GGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACG 732
||| | | | || ||||||| | ||||||| |||| |||| ||||||| |||||||
Sbjct 374 GGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACG 316
Query 733 GTTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C 789
|||||||||||||||||||||||| | | | | ||| |||||||||||||||||| |
Sbjct 315 GTTGTAATGAAAGAGACAAACAAGTTAAGAAAAAGATACCCACCACGAATCAAAAAGAAC 256
Query 790 -T--C-AT------TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACT 839
| | | |||| |||||||||||||||||||||||||| | ||||||||||||
Sbjct 255 GTATCTAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACT 196
Query 840 GACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
||||||| |||||||||||||||||||||||| ||||||
Sbjct 195 GACATCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 157
Score = 113 bits (61), Expect = 2e-24
Identities = 69/73 (95%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 405 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 464
||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||
Sbjct 827 GTGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGTGTA 768
Query 465 CGGTCAACCGAGT 477
|||||| ||||||
Sbjct 767 CGGTCACCCGAGT 755
> AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113
REVERSE LENGTH=1061
Length=1061
Score = 412 bits (223), Expect = 2e-114
Identities = 273/297 (92%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 3 ATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCATGG 62
||||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||
Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987
Query 63 AAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTGTA 122
| || ||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||
Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927
Query 123 GC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCTCT 181
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868
Query 182 TAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTACG 241
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808
Query 242 TCTTGGAGTCACGGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297
|||||||||||| | |||||||||||||||| || ||| ||| |||||||||| |||
Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752
Score = 357 bits (193), Expect = 1e-97
Identities = 337/400 (84%), Gaps = 35/400 (9%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||
Sbjct 565 GATCGAGGGTACTTCCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 506
Query 566 CATCTTCGTTG-TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 624
|||||||||| ||| ||| | ||| ||||||||||||||||||||||||||||||||||
Sbjct 505 TATCTTCGTTGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 450
Query 625 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACG 683
||||||||||||||||||||||||||| |||| ||||||||| || | || ||||||||
Sbjct 449 TCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCA-CACACACG 391
Query 684 GT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTGCCTTGACG 732
|| | | | || ||||||| | ||||||| || | | ||||||||||| |||||||
Sbjct 390 GTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTGACG 333
Query 733 GTTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C 789
|||||||||||| ||||||||||| ||| | ||||| || ||||||||||||||| |
Sbjct 332 GTTGTAATGAAAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAAC 273
Query 790 -T--C-AT------TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACT 839
| | | |||| |||||||||||| ||||||||||||| | ||||| ||||||
Sbjct 272 GTATCCAACCCCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATCACT 213
Query 840 GACATCTTTCCCGGCATCCAGTAACTAATTAT-TGGATTG 878
|||||||||||| |||| ||||||||||||| || ||||
Sbjct 212 AACATCTTTCCCGACATCGAGTAACTAATTATGTG-ATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 67/73 (92%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 405 GTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTA 464
||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||
Sbjct 845 GTGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTA 786
Query 465 CGGTCAACCGAGT 477
|||||| || |||
Sbjct 785 CGGTCACCCAAGT 773
> AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908
REVERSE LENGTH=1058
Length=1058
Score = 405 bits (219), Expect = 4e-112
Identities = 271/297 (91%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||
Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|| || ||||||||||||| | |||| |||||||||||||| |||||||| |||||||
Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCTC 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866
Query 181 TTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTAC 240
|||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806
Query 241 GTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749
Score = 333 bits (180), Expect = 2e-90
Identities = 330/397 (83%), Gaps = 32/397 (8%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 562 GATCGATGGTACTT-CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 504
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
||||||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||
Sbjct 503 CATCTTCGTTG---TCCT-CTCATCTTCATCCTCATCTGTTTTATCGTCTTCAATGTCGT 448
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACT--C-CA-ACACA-- 679
|||||| |||||||| |||||||||| |||| ||||| || |||| | || |||||
Sbjct 447 CTTGCTAATCTACGGTCTCATTATTTTCATCAACATTAAAA-CACTATCACACACACAGT 389
Query 680 CACGGTAA-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 735
||| | | | || ||||||| | ||||||| |||| |||| ||||||| |||||||||
Sbjct 388 CACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTATTGACGGTT 330
Query 736 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 790
||||||||||||||||||||| ||| | ||||| |||||||||||| ||||| | |
Sbjct 329 GTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAATCGTA 270
Query 791 -C--A---T---TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGA 841
| | | |||| |||||||||||||||||||||||||| | |||| ||| ||| |
Sbjct 269 TCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTA-CATAACTAA 211
Query 842 CATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
|||| |||||| |||||||||||||| || ||||||
Sbjct 210 CATCACTCCCGGTATCCAGTAACTAATCATGGGATTG 174
Score = 89.8 bits (48), Expect = 4e-17
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 406 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 465
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCACAACTGGTGTAC 782
Query 466 GGTCAACCG 474
||||| |||
Sbjct 781 GGTCACCCG 773
> AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093
REVERSE LENGTH=1068
Length=1068
Score = 394 bits (213), Expect = 8e-109
Identities = 270/298 (91%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||| ||||| ||||||||||||| |||||||||||| |||||||| |||||||| |||
Sbjct 1055 TCATAGGATGTAATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 996
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| || ||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 995 GGACAAGTATCATCAACGCATACCATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTG 936
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGCTC 180
|||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 935 TAGCAAAAAAATTGTTTGATTGTGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTG 876
Query 181 TTAAAAACACTCTCC-AATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||| ||| ||||| |||| || ||||||||||||||||||||||||||| ||
Sbjct 875 TTAAAAACACT-TCCCAATCTATAGTATATGTACATTGGTACAAACCATGTTGACACATA 817
Query 240 CGTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| ||||||||| || | |||||||||||||||||| |||||||| ||||||||| |||
Sbjct 816 CTTCTTGGAGTTACAGCTGGTGTACGGTCACCCGAGTGAGAAATATTATCTCCGTCAG 759
Score = 331 bits (179), Expect = 6e-90
Identities = 321/384 (84%), Gaps = 31/384 (8%)
Strand=Plus/Minus
Query 520 CCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCACCATCTTCGTTGTCC 579
||||||||||||||||| | |||||||||||||||||||||| |||| ||||| |||| |
Sbjct 551 CCCCCCATAGATCCATCGTTACCCTGATAATCATCATACCCATCACCGTCTTCATTGT-C 493
Query 580 TCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTGCTCATCTACG 639
|| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 492 -CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGTCTTCCTCATCTATG 435
Query 640 GCCTCATTATTTCCATCTA-CATTTGAAGCACTC-CAACACACACGGT-A-----A-C-T 689
|||||||||||| ||| || ||||||||||||| || |||||||||| | | | |
Sbjct 434 GCCTCATTATTTTCAT-TAACATTTGAAGCACTATCA-CACACACGGTCACTTTCAGCAT 377
Query 690 C-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGAAAGAG 747
| ||||||| | ||||||| |||| |||||||||||| ||||||||||||||||||||||
Sbjct 376 CGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGACGGTTGTAATGAAAGAG 318
Query 748 ACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T--C-A-T-----T 794
||||||||| ||| | ||||| || ||||||||||||||| | | | | | |
Sbjct 317 ACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAATCCCACT 258
Query 795 TGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCCCGGC 854
||| | |||||| ||||| ||||||||| | | |||||||| ||| |||||| ||||| |
Sbjct 257 TGACTATCAATGAAGACAAGAGGGCGTTGAGTATCTATCATGACTAACATCTCTCCCGAC 198
Query 855 ATCCAGTAACTAATTATTGGATTG 878
||| ||||||||||||| ||||||
Sbjct 197 ATCTAGTAACTAATTATGGGATTG 174
> AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965
REVERSE LENGTH=733
Length=733
Score = 385 bits (208), Expect = 5e-106
Identities = 333/389 (86%), Gaps = 25/389 (6%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||||||||| | || |||| |||||||||||||||||||||||||||||||| ||||
Sbjct 493 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACATCGT 437
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCAC--TCCAACACACACG 683
|||||||||||||||||||||||||| |||| ||||||||| ||| || | | || |
Sbjct 436 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTC-A-CTTTCA-G 380
Query 684 GTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGA 742
| | ||||||| | ||||||| |||| ||||| |||||| |||||||||||||||||
Sbjct 379 C-ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAATGA 323
Query 743 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT-- 793
|||||||||||||| ||| | ||||| || ||||||||||| ||| | | | ||
Sbjct 322 AAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACC 263
Query 794 ----TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 849
|||| ||||||||||||||||| |||||||| | |||||||||||| |||||| ||
Sbjct 262 CCACTTGACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTCTC 203
Query 850 CCGGCATCCAGTAACTAATTATTGGATTG 878
|||||||||||||||||||||| ||||||
Sbjct 202 CCGGCATCCAGTAACTAATTATGGGATTG 174
> AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964
FORWARD LENGTH=759
Length=759
Score = 379 bits (205), Expect = 2e-104
Identities = 337/396 (85%), Gaps = 27/396 (7%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||
Sbjct 487 GATCGAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCAC 428
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|| |||||||||| |||||||||| |||||||| |||||||||||||||| ||||||
Sbjct 427 GATATTCGTTGTCCCCCTCCTCTTC---ATCCTCATTTGTTTTATCGTCTTCATCGTCGT 371
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACGG 684
|||||||||||||||||||||||||| |||| ||||||||| |||| || || ||||||
Sbjct 370 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCA-CATACACGG 312
Query 685 TAACTCTCA-C--CATC-----G-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 735
||||| ||| | |||| | ||||||| |||| ||||| |||||| ||||||||||
Sbjct 311 TAACTTTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTT 252
Query 736 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 790
||||||||||||||||||||| ||| | ||||| || ||||||||| ||||| | |
Sbjct 251 GTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTA 192
Query 791 -C-AT------TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGAC 842
| | |||| |||||||||||||||||||||||||| | |||||||||||| ||
Sbjct 191 TCCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAAC 132
Query 843 ATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
|||| |||||||||||||||||||||||| ||||||
Sbjct 131 ATCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727
FORWARD LENGTH=714
Length=714
Score = 379 bits (205), Expect = 2e-104
Identities = 332/389 (85%), Gaps = 25/389 (6%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 442 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 383
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 382 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 326
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCAC--TCCAACACACACG 683
|||||||||||||||||||||||||| |||| ||||||||| ||| || | | || |
Sbjct 325 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTC-A-CTTTCA-G 269
Query 684 GTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGA 742
| | ||| ||| | | ||||| |||| |||||| ||||| |||||||||||||||||
Sbjct 268 C-ATCA-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAATGA 212
Query 743 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CA--T 793
|||||||||||||| ||| | ||||| || ||||||||||| ||| | | | || |
Sbjct 211 AAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAACT 152
Query 794 ----TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 849
|||| |||||||||||||||||||||||||| | |||||||||||| |||||| ||
Sbjct 151 CCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTC 92
Query 850 CCGGCATCCAGTAACTAATTATTGGATTG 878
|||||||||||||||||||| ||||||
Sbjct 91 TGGGCATCCAGTAACTAATTATGGGATTG 63
> AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473
REVERSE LENGTH=963
Length=963
Score = 368 bits (199), Expect = 5e-101
Identities = 331/390 (85%), Gaps = 27/390 (7%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 553 GATCGAGGGTACTTCCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 494
Query 566 CATCTTCGTTGTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 624
|||||||||| ||| || | | ||| ||||||||||||||||||||||||||||||||||
Sbjct 493 CATCTTCGTTATCC-CCAT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAACGTCG 438
Query 625 TCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCAC--TCCAACACACAC 682
|||||||||| |||||||||||||||| |||| ||||||||| ||| || | | ||
Sbjct 437 TCTTGCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTC-A-CTTTCA- 381
Query 683 GGTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATG 741
| | | ||||||| | ||||||| |||| ||||| ||||| |||||||||||||||
Sbjct 380 GC-ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAATA 324
Query 742 AAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCA-AAA-A-C-T---CAT- 793
||||||||||||||| ||| | ||||| || ||||||||||| ||| | | | ||
Sbjct 323 AAAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAAC 264
Query 794 -----TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTT 848
|||| |||||||||||||||||||||||||| | |||||||||||| |||||| |
Sbjct 263 CCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCT 204
Query 849 CCCGGCATCCAGTAACTAATTATTGGATTG 878
||||||||||||||||||||||| ||||||
Sbjct 203 CCCGGCATCCAGTAACTAATTATGGGATTG 174
> AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130
REVERSE LENGTH=763
Length=763
Score = 368 bits (199), Expect = 5e-101
Identities = 330/389 (85%), Gaps = 25/389 (6%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||
Sbjct 554 GATCGAGGGTACTTCCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCATCAC 495
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || ||
Sbjct 494 CATCTTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATGTTGT 438
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCAC--TCCAACACACACG 683
|||||||||||||||||||||||||| |||| ||||||||| ||| || | | || |
Sbjct 437 CTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTC-A-CTTTCA-G 381
Query 684 GTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTTGTAATGA 742
| | ||||||| | ||||||| |||| |||| ||||||| |||||||||||||||||
Sbjct 380 C-ATCG-TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAATGA 324
Query 743 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T---CAT-- 793
|||||||||||||| ||| | ||||| || ||||||||| ||||| | | ||
Sbjct 323 AAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAACC 264
Query 794 ----TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 849
|||| |||||||||||||||||||||||||| | |||||||||||| |||||| ||
Sbjct 263 CCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTCTC 204
Query 850 CCGGCATCCAGTAACTAATTATTGGATTG 878
|||| ||||||||||||||||| ||||||
Sbjct 203 CCGGAATCCAGTAACTAATTATGGGATTG 175
> AT5G40110.1 | Symbols: | transposable element gene | chr5:16049934-16050776
FORWARD LENGTH=843
Length=843
Score = 351 bits (190), Expect = 5e-96
Identities = 332/396 (84%), Gaps = 27/396 (7%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||
Sbjct 487 GATCGAGGGTACTTCCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCACCAC 428
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||| ||||| | || |||| ||||||||||||| |||||||||||||||| ||||||
Sbjct 427 CATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATTTGTTTTATCGTCTTCATCGTCGT 371
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCAC--TC-CA-ACAC--A 679
||| |||||||||||||||||||||| |||| ||||||||| ||| || || ||||
Sbjct 370 CTTTCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACACGGT 311
Query 680 CACGGT-AAC-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGTT 735
||| | | | || ||||||| | ||||||| |||| |||| || ||| ||||||||||
Sbjct 310 CACTTTCAGCATCATCACCAT-GAGTCCTAGAGACATTATTATCGGGTGTCTTGACGGTT 252
Query 736 GTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATCAAAAA---C-T- 790
|||||||||||||||||||| ||| | ||||| || ||||||||| ||||| | |
Sbjct 251 GTAATGAAAGAGACAAACAAATTGAGAGAAGGATACCGACCACGAATTAAAAAGAACGTA 192
Query 791 -C-AT------TTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGAC 842
| | |||| |||||||||||||||||||||||||| | ||||||| |||| ||
Sbjct 191 TCCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCAGCACTAAC 132
Query 843 ATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 878
|||| |||||||||||||||||||||||| ||||||
Sbjct 131 ATCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96
> AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123
FORWARD LENGTH=870
Length=870
Score = 329 bits (178), Expect = 2e-89
Identities = 224/246 (91%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 54 ATGCCATGGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACG 113
||| |||||| || ||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 870 ATGTCATGGACAAGTATCATCAACGCAAACCATCTCCAATCTTGTAGGACATGACCTAGG 811
Query 114 TTGCTTGTAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTT 172
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 810 TTGCTTGTAGCAAAAAG-ATTGTTTGATTGCAAGATAAGACATTGTTTGTTGTATGACTT 752
Query 173 TTCTGCTCTTAAAAACACTCTCC-AATCTGTAGTGTACGTACATTGGTACAAACCATGTT 231
||||| | ||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||
Sbjct 751 TTCTGTTTTTAAAAACACT-TCCCAATCTATAGTGTACGTACAATGGTACAAACCATGTT 693
Query 232 GACACGTACGTCTTGGAGTCACGGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTC 291
||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||||||
Sbjct 692 GACACATACTTCTTGGAGTCACAACTGGTGTATGGTCACCCGAGTGAGAAATGTTATCTT 633
Query 292 CGCCAG 297
||||||
Sbjct 632 CGCCAG 627
Score = 300 bits (162), Expect = 2e-80
Identities = 317/388 (82%), Gaps = 25/388 (6%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 440 GATCGAGGGTACTTTCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 381
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||| ||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 380 CATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 324
Query 626 CTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTC-CAACACACACGG 684
||||||||||||||| |||||||||| |||| ||||||||| |||| || |||||||||
Sbjct 323 CTTGCTCATCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCA-CACACACGG 265
Query 685 T-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTGCCTTGACGGT 734
| | | | || ||||||| | |||||| |||| |||||||||||| ||||||||
Sbjct 264 TCACTTTCAGCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTTGACGGA 206
Query 735 TGTA-ATGAAAGAGACAAACA-AGGTGACACTAGGA-TCCCCACCA-CGAATCAAAAACT 790
| | | |||| || | | ||| | | || || | | || ||| || |
Sbjct 205 CAAACAAGTT-GAGAGAAGGATACC-GAC-C-ACGAATCAAAAAGAACGTATCCAACCC- 151
Query 791 CATTTGATTGTCAATGTAGACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTCC 850
|| |||| ||||||||||||||||| | |||||| | |||||||||||| |||||| |||
Sbjct 150 CACTTGACTGTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTCC 91
Query 851 CGGCATCCAGTAACTAATTATTGGATTG 878
|||||||||||||||||||| ||||||
Sbjct 90 TGGCATCCAGTAACTAATTATGGGATTG 63
> AT3G45120.1 | Symbols: | transposable element gene | chr3:16511730-16512050
REVERSE LENGTH=321
Length=321
Score = 259 bits (140), Expect = 3e-68
Identities = 266/322 (83%), Gaps = 27/322 (8%)
Strand=Plus/Minus
Query 546 ATAATCATCATACCCAGCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGT 605
|||| ||||||||||| ||||||||||||||| | || |||| |||||||||||||||||
Sbjct 318 ATAAGCATCATACCCATCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGT 262
Query 606 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGA 665
|||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 261 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGACCTCATTATTTTCATCAACATTTGA 202
Query 666 AGCACT--C-CA-ACACA--CACGGTAA-C-TC-TCACCATCG-GTCCTAGGGACAGTAT 715
| |||| | || ||||| ||| | | | || ||||||| | || |||| |||| |||
Sbjct 201 AACACTATCACACACACAGTCACTTTCAGCATCGTCACCAT-GAGTTCTAGAGACATTAT 143
Query 716 TCCCGAGTGCCTTGACGGTTGTAATGAAAGAGACAAACAAGGTGACACTAGGATCCCCAC 775
| ||||||| ||||||||||||||| ||||||||||||||| ||| | ||||| | ||
Sbjct 142 TTCCGAGTGTCTTGACGGTTGTAATAAAAGAGACAAACAAGTTGAGAGAAGGATACTGAC 83
Query 776 CACGAATCAAAAA---C-T---CAT------TTGATTGTCAATGTAGACAGGAGGGCGTT 822
||||||| ||||| | | || |||| ||||||||||||||||||||||||
Sbjct 82 CACGAATAAAAAAGAACGTATTCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTT 23
Query 823 TACTTTCTATCATCACTGACAT 844
|| | |||||||||||| ||||
Sbjct 22 TAGTATCTATCATCACTAACAT 1
> AT4G05584.1 | Symbols: | transposable element gene | chr4:2864901-2865581
FORWARD LENGTH=681
Length=681
Score = 200 bits (108), Expect = 2e-50
Identities = 165/191 (86%), Gaps = 9/191 (5%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTATGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||| |||||||||||||||||| ||| |||||||| |||||||| |||||||| ||
Sbjct 345 TCATACTATGTGATTTTGAAACATTCTGAGTTCTTGACGACTTGAGCAGTCAAATGTAAT 286
Query 61 GGAAAAATATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||| || ||||||||| ||| || ||||||||||||||||| |||| || |||
Sbjct 285 GGACAAGTATCATCAATGCAAACTATCTCCAATCTTGTAGGCCATG----AC----CTTA 234
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGAT-AAGACATTGTTTGTTGTATGACTTTTCTGCT 179
||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 233 TAGCAAAAGTATTGTTTGATTGCGAGATAAAGACATTGTTTGTTGTATGACTTTTCTGTT 174
Query 180 CTTAAAAACAC 190
|||| ||||||
Sbjct 173 CTTAGAAACAC 163
> AT2G16820.1 | Symbols: | transposable element gene | chr2:7290104-7290952
REVERSE LENGTH=606
Length=606
Score = 174 bits (94), Expect = 1e-42
Identities = 114/123 (93%), Gaps = 3/123 (2%)
Strand=Plus/Minus
Query 506 GATCGAGGGTACTTCCCCCCATAGATCCATCATCACCCTGATAATCATCATACCCAGCAC 565
|||||| || ||||| ||||||||||||||| |||||||||||||||||||||||| |||
Sbjct 330 GATCGAAGGCACTTCTCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCATCAC 271
Query 566 CATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 625
|||||||||||| | || |||| |||||||||||||||||||||||||||||||||||||
Sbjct 270 CATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACGTCGT 214
Query 626 CTT 628
|||
Sbjct 213 CTT 211
> AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486
FORWARD LENGTH=1011
Length=1011
Score = 124 bits (67), Expect = 1e-27
Identities = 77/82 (94%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 109 CTACGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATG 168
||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185
Query 169 ACTTTTCTGCTCTTAAAAACAC 190
||||||||| ||||| ||||||
Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163
> AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549
FORWARD LENGTH=2952
Length=2952
Score = 86.1 bits (46), Expect = 5e-16
Identities = 86/105 (82%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 430
||||||||| | ||| |||| | |||| || | ||||||||||||||||||||||||||
Sbjct 849 ACCTTCGCATCTTGTCTCTTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 790
Query 431 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 789 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACTGTCAACC 747
Score = 76.8 bits (41), Expect = 3e-13
Identities = 61/70 (87%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 759 TGTACTGTCA 750
> AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995
REVERSE LENGTH=4305
Length=4305
Score = 80.5 bits (43), Expect = 2e-14
Identities = 85/105 (81%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 430
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 431 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 76.8 bits (41), Expect = 3e-13
Identities = 61/70 (87%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236
REVERSE LENGTH=2830
Length=2830
Score = 80.5 bits (43), Expect = 2e-14
Identities = 85/105 (81%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 430
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 431 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 76.8 bits (41), Expect = 3e-13
Identities = 61/70 (87%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701
REVERSE LENGTH=2829
Length=2829
Score = 76.8 bits (41), Expect = 3e-13
Identities = 61/70 (87%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACAT-TCTGTTGTGTACGTACATTGGTACAAACCAT 429
||||||||| | ||| || | | ||| | || | |||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCAC-TGACTCTAGTGTACGTACATTGGTACAAACCAT 794
Query 430 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
|||||||||| || ||||| || | ||||||||| |||||||
Sbjct 793 GTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
> AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630
FORWARD LENGTH=2760
Length=2760
Score = 76.8 bits (41), Expect = 3e-13
Identities = 61/70 (87%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
Score = 75.0 bits (40), Expect = 1e-12
Identities = 82/102 (80%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 374 TTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATGTTG 433
|||||| | ||| || | | |||| || | |||||||||||||||||||||||||||||
Sbjct 849 TTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATGTTG 790
Query 434 ACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
|||||| || ||||| || | ||||||||| |||||||
Sbjct 789 ACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACAGTCAACC 750
> AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827
FORWARD LENGTH=1065
Length=1065
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 430
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 431 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACG-GTCAACC 473
||||||||| || ||||| || | |||||||| | |||||||
Sbjct 792 TTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTA-GTGTCAACC 750
Score = 71.3 bits (38), Expect = 1e-11
Identities = 56/64 (88%), Gaps = 4/64 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || ||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTA 263
||||
Sbjct 762 TGTA 759
> AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449
REVERSE LENGTH=2562
Length=2562
Score = 75.0 bits (40), Expect = 1e-12
Identities = 84/105 (80%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 430
||||||||| | ||| || | | |||| || | |||||||||||||||||||||||||
Sbjct 656 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAATGTACGTACATTGGTACAAACCATG 597
Query 431 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
||||||||| || ||||| || | ||||||||| |||||||
Sbjct 596 TTGACACGT-CGGGGATGGAG-CAGAGATTGGTGTACTGTCAACC 554
Score = 65.8 bits (35), Expect = 7e-10
Identities = 58/68 (85%), Gaps = 6/68 (9%)
Strand=Plus/Minus
Query 205 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACG-G-TTGGTG 261
|||||||||||||||||||||||||||||||||| || ||||| || | | ||||||
Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CA-GAGATTGGTG 565
Query 262 TACGGTCA 269
||| ||||
Sbjct 564 TACTGTCA 557
> AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913
FORWARD LENGTH=2709
Length=2709
Score = 75.0 bits (40), Expect = 1e-12
Identities = 84/105 (80%), Gaps = 4/105 (4%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTATCTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCATG 430
||||||||| | ||| || | | |||| || | ||||||||||||||||||||||||||
Sbjct 852 ACCTTCGCATCTTGTCTCCTCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCATG 793
Query 431 TTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 473
||||||||| || | ||| || | ||||||||| |||||||
Sbjct 792 TTGACACGT-CGGGGATAGAG-CAGAGGTTGGTGTACAGTCAACC 750
Score = 71.3 bits (38), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCAC-GGTTGG 259
||||||||||||||||||||||||||||||||||||| || | ||| || ||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATAGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701
FORWARD LENGTH=1159
Length=1159
Score = 65.8 bits (35), Expect = 7e-10
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 236
|||||||||||||||||||||||||||||||||||
Sbjct 819 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 785
Score = 63.9 bits (34), Expect = 2e-09
Identities = 57/68 (84%), Gaps = 2/68 (3%)
Strand=Plus/Minus
Query 371 ACCTTCGCAGCATGTAT-CTTGTACACATTCTGTTGTGTACGTACATTGGTACAAACCAT 429
||||||||| | ||| | | | | |||| || | |||||||||||||||||||||||||
Sbjct 851 ACCTTCGCATCTTGTCTAC-TCTGCACAGACTCTAGTGTACGTACATTGGTACAAACCAT 793
Query 430 GTTGACAC 437
||||||||
Sbjct 792 GTTGACAC 785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42849727391
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5