BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484955
Length=2386
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45750.1 | Symbols: | Nucleotidyltransferase family protein... 3205 0.0
AT3G45760.1 | Symbols: | Nucleotidyltransferase family protein... 931 0.0
> AT3G45750.1 | Symbols: | Nucleotidyltransferase family protein
| chr3:16793611-16797933 REVERSE LENGTH=2488
Length=2488
Score = 3205 bits (1735), Expect = 0.0
Identities = 2193/2409 (91%), Gaps = 51/2409 (2%)
Strand=Plus/Plus
Query 1 CGGGACCGTAAAACTGTATCATCTCCGACTAAGTTTGTCGCCGCCTTTTTCCTCTGTCAA 60
|||||||||||||||| ||| ||||||||| || || || |||| |||||||||| | |
Sbjct 96 CGGGACCGTAAAACTGCATCCTCTCCGACT-AG-TT-TCATCGCC-TTTTCCTCTGCCTA 151
Query 61 AAACATTCTCCGGTTTAGTACCTCTGCTTAAGGATTAGAGAGGT-ATTATGGACTCGCGA 119
||||||||||||||||||| |||||||||| | |||||| || ||||||| ||| |||
Sbjct 152 TAACATTCTCCGGTTTAGTATCTCTGCTTAA-G--TAGAGA-GTAATTATGGGCTCTCGA 207
Query 120 GGGAATGTGGCTGAGGATAAGAATGTTTCGAGTAAAGCGATTCGAAAGAAGGTTAACAAC 179
|| ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||
Sbjct 208 GGAAATGTGGCTGAGGATAAAAATGTTTCGAGTAAAGTGATTCGAAAGAAGGTGAACAAC 267
Query 180 ACTGTGTCAATAGCATTAAAGAGATATAAGATTGATAGTTATATCTTACTGGACCTTGAT 239
||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 268 ACTGTGTCAATAGCACTCAAGAGATATAAGATTGATAGTTATATCTTACTGGATCTTGAT 327
Query 240 AAGGTATTAAATGATGTCTACTGCTCTTTTCGACCGGTTTCTGCTGATTACGATACTAGG 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 328 AAGGTATTAAATGATGTCTACTGCTCTTTTCGACCGGTTTCTGCTGATTACAATACTAGG 387
Query 300 AAGGAATTGGTGAAAAACCTTAATGCTATGGCTATAGATATTTATGGTAATTCGGAAGAG 359
||||||||||| |||||||||||| |||||||| |||||||||||||||| || ||||||
Sbjct 388 AAGGAATTGGTCAAAAACCTTAATACTATGGCTTTAGATATTTATGGTAAGTCTGAAGAG 447
Query 360 AGCAGCCCGGTCCTTGAGGCGTATGGGTCTTTCGTGATGGATATGTATTCCTCTCAGAGT 419
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 448 AGCAGCCCGGTCCTTGAGGCGTATGGGTCTTTTGTGATGGATATGTATTCATCTCAGAGT 507
Query 420 GATTTGGACGTGTCTATTAACTTCGGTAATGGAACATCTGA-ACTTCCTCGTGAAAAGAA 478
||||| || |||||||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct 508 GATTTAGATGTGTCTATTAACTTTGGTAATGGAACATCTGAGA-TTCCTCGTGAAAAGAA 566
Query 479 GCTCGAGATACTTAAAAGATTTGCAAAGAAGCTCCGGGCTCTGCAGGGAGAAGGGCATGT 538
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||
Sbjct 567 GCTCGAGATACTTAAAAGATTTGCTAAGAAGCTCCGTTCTCTGCAGGGAGAAGGGCAGGT 626
Query 539 TAAGAATGTTGAATCTATCTTCTCTGCTAAGGTGCCAATTATCAAATTCTCTGATCAAGG 598
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct 627 TAAGAATGTTGAATCTATCTTCTCTGCTAAAGTGCCAATTGTCAAATTCTCTGATCAAGG 686
Query 599 GACTGGTGTTGAATGTGATTTGTCAGTCGAAAATAAAGACGGCATTTTAAATTCACAGAT 658
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 687 GACTGGTGTTGAGTGTGATTTGTCAGTCGAAAATAAAGATGGCATTTTAAATTCACAGAT 746
Query 659 CGTTCGCATCATATCTCAAATTGATGGCAGGTTTCAAAAACTTTGTATATTGGTTAAGCA 718
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 747 CGTTCGCATCATATCTCAAATTGATGGCAGGTTTCAAAAACTTTGTCTGTTGGTTAAGCA 806
Query 719 TTGGGCCAAAGCTCATGAAGTTAACAGTGCGCTACACCGAACCCTGAATTCTGTATCTAT 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 807 TTGGGCCAAAGCTCATGAAGTTAACAGTGCGCTACACCGAACCCTGAATTCTGTATCTAT 866
Query 779 AACATTGCTAGTCGCTCTTCACTTACAGACTCAAAATCCTCCCATTTTACCTCCATTCTC 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 867 AACATTGCTAGTCGCTCTTCACTTACAGACTCAAAATCCTCCCATTTTACCTCCATTCTC 926
Query 839 TATGCTATTTAAAGATGGAATTGATCCTCCTAACGTGGAGAAAAGGGCACAAAAGTTCTT 898
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 927 TATGCTATTGAAAGATGGAATGGATCCTCCTAACGTGGAGAAAAGGGCACAAAAGTTCTT 986
Query 899 AAACTGGGGACAGCGTAATCAGGAATCTCTGGGTAGACTGTTTGCAACCTTTTTTATTAA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 AAACTGGGGACAGCGTAATCAGGAATCTCTGGGTAGACTGTTTGCAACCTTTTTTATTAA 1046
Query 959 GTTACAATCCGTAGAATTCCTCTGGAGGCAAGGGCTCTGCGTCAGTGTGCTAAACGGTCT 1018
||||||||| ||||||||||| ||||| ||||||||||||||||||||||| || |||||
Sbjct 1047 GTTACAATCTGTAGAATTCCTTTGGAGACAAGGGCTCTGCGTCAGTGTGCTGAATGGTCT 1106
Query 1019 TTGGATATCTAAAAAGTGGAAAAAAGTTGGGGTTGGATCCATTAGTGTTGAGGATTTTAC 1078
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1107 TTGGATATCTAAAAAGTGGAAAAAAGTTGGCGTTGGATCCATTAGTGTTGAGGATTTTAC 1166
Query 1079 TAACGTGA-CTCAAAATGTCGCAAGGCGGGTTAATGGTGCAGGAGCCAAAAAGATATACA 1137
||| | | |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1167 CAACAT-ATCTCAAAATGTCGCAAGACGGGTTAATGGTGCAGGAGCCAAAAAGATATACA 1225
Query 1138 GCTCCATAAACAGAACCGTCGAAGACATCTTTGAATTCCTCAATGACAAGGTTGCTGGAA 1197
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1226 GCTCCATAAACAGAACCGTTGAAGACATCTTTGAATTCCTCAATGACAAGGTTGCTGGAA 1285
Query 1198 CAGATCTCAGACATAGGTTGTTTGGCAAAGGAGCTGTTGTGCAGATTCCTCCTGGGGCGC 1257
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1286 CAGATCTCAGACATAGGTTGTTTGGCAAAGGATCTGTTGTGCAGATTCCTCCTGTGGCGC 1345
Query 1258 CACTTAATGGAAAGACTGCTGGAATACACACGGTGTCTGGCCAACAAGCTGTTGTGGAGC 1317
|||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct 1346 CACTTAATGGAAAGACCGCTGGAATACACAAGGTGTCTGGCCAACAAGCTGTGGTGCAGC 1405
Query 1318 CT-CGTCCTCCTGTGCCGCCG-CTCAATGGCAAAATTGCTGGAACACATCGCAAACAGAA 1375
|| | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 1406 CTTC-TCCTCCTGTGCCGC-GACTCAATGGCAAAATTGCTGGAACACATCGCAAACAGAA 1463
Query 1376 GGTGTTTGCCCGACAACCAGTTGTGGAGCCTCGTCTTCCTGTGCCGCCACTCGATGGCAA 1435
||||||||| | |||| |||||||||||||||||| |||||||| |||||| |||||||
Sbjct 1464 GGTGTTTGCGCAACAAGCAGTTGTGGAGCCTCGTCCTCCTGTGCTGCCACTTAATGGCAA 1523
Query 1436 AATTGCTGGCACACATTTCAGACATAAGTCGTTTGGCCAACAAGCTGTTGT-GCAGCCTC 1494
|| ||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||
Sbjct 1524 TATCGCTGGCACACATTTCAGACATGAGTCGTTTCGCCAACAAGCTGT-GTTGCAGCCTC 1582
Query 1495 --C-TCCTGTGCGGCCACTCAATGGTAA-TATCGTTGGAACTCATTTCAGAGATAGGTTG 1550
| |||| |||||||| ||||||| || ||| | |||||||||||||||||||||||||
Sbjct 1583 TTCCTCCTCTGCGGCCAGTCAATGG-AAGTATTGGTGGAACTCATTTCAGAGATAGGTTG 1641
Query 1551 TTTGACCAACAAGTACTGGTGGAGTCTCATCCTCTTCTGCCGCCATTCAACGGCAATATC 1610
||||||||||||||||| |||||| ||| |||||||||||||||||||| |||| ||||
Sbjct 1642 TTTGACCAACAAGTACTTGTGGAGCCTCGTCCTCTTCTGCCGCCATTCAGTGGCAGTATC 1701
Query 1611 ACTGGAACGCATTTCAGATATAGGTCGTTTGACCAACCAGCAGTTCTGGAGCCTCGTCCT 1670
||| ||||||||||||| ||||||||||| |||| |||||||||||| |||||||||
Sbjct 1702 GCTGAAACGCATTTCAGACATAGGTCGTTTCCCCAAGAAGCAGTTCTGGACCCTCGTCCT 1761
Query 1671 CCTGTGCCGTCTCTCAACATTTACTCACATCAACTTCACAATAACTACAGAAACGGGTTC 1730
|||||| ||| | |||| |||||||||| |||||||||||||||||||||||||| |||
Sbjct 1762 TCTGTGCAGTCGCGCAACGTTTACTCACAACAACTTCACAATAACTACAGAAACGGTTTC 1821
Query 1731 AGTGGTCCTCCTGAAGAACATTACAGCAAAAGAGTTTGTTTGGGAAACAACTACAGAGCT 1790
|| |||||||||||||||||| ||| ||||||| |||||||||||||| ||||||||||
Sbjct 1822 AGCGGTCCTCCTGAAGAACATCACACCAAAAGACTTTGTTTGGGAAACCGCTACAGAGCT 1881
Query 1791 GTAGAAGAAATGGGTCAGTGGAGAGAGGAAGAGAGATACGAAGATCCCAGAGGAAAACGA 1850
||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1882 CTAGAAGAAACGGGTAACTGGAGAGAGGAAGAGAGATACGAAGATCCCAGAGGAAAACGA 1941
Query 1851 AACAGGTATATTGGAAACTTTAATGGGTTTGAAGAGTTTCGTGAAATTCCCCGGTTTGGA 1910
||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1942 AACAGGTATGTCGGAAACTTTAATGGGTTAGAAGAGTTTCGTGAAATCCCCCGGTTTGGA 2001
Query 1911 ATCCATAGTAACCCTTTAGATGATCCTTATAGACAAGTCCCTTTGAATGCTGGAACAAAT 1970
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2002 ATTCATAGTAACCCTTTAGATGATCCTTATAGACAAGTCCCTTTGAATGCTGGAACAAAT 2061
Query 1971 GGTCATTTGGTTCGCCATAGGCATGATGGTAGATATAGTCGTGAAGAACCAATGCATGTG 2030
||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 2062 GGTCATTTGGTTCACCATAGGCATGATGGTAGATATAATGGTGAAGAACCAATGCATGTG 2121
Query 2031 GGACCGTGGCAAGACTACAATCGTAGAATTGGTCCGCCACCAC--CG-CAA-CCCCTTCC 2086
|||| ||||||||||||| ||||||| ||||| ||||||||| | ||| |||| ||
Sbjct 2122 GGACAATGGCAAGACTACACTCGTAGAGTTGGTTCGCCACCACTACAACAAACCCCA-CC 2180
Query 2087 TCCTTATGAGA-ATTTTCGTCCTCAAAACCTTAACCAACCTCATTTTGGTAGATCGTTTT 2145
|||||||| | | || || | || | || | |||||||| |||||||||||||
Sbjct 2181 ACCTTATGATAGAGTTA-GTTATGAAGATTTT--CGT-CCTCATTTAGGTAGATCGTTTT 2236
Query 2146 ACAAGTAGGGTTTTTGAACAGCAAAGTTCAAAACCAACCAA-ATATAAATTCATTTTAGG 2204
|| | ||||||||||| |||||||||| |||||||| || | | | || ||||| |
Sbjct 2237 ACCATTAGGGTTTTTGGTCAGCAAAGTTAAAAACCAATCACCA-ACCATTT--TTTTAAG 2293
Query 2205 GAGGA--ATA-CAGG-T-TT-TCGGTA-CTTCGGTTTAAATGTGGGGAAGTGAAATTGAT 2257
| | ||| | | || | | | | ||| | ||| | | ||| ||| |||||
Sbjct 2294 -ATGTTTATAACTTCATATTATATGAAGC--CGGAATCAATATTAG-AAGGGAA-TTGAT 2348
Query 2258 GTAACTACAGTTTTGGGTGCTGAGAAAGTGTCATGAATGTTGTATGTTACTGTTTAGCTC 2317
||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||
Sbjct 2349 GTAACTACAGTTTTGGGTGATGAGAAAGTGTCATGAATGTTGTATTTTACTGTTTAT-TC 2407
Query 2318 TGGATTCGGTTAAAATTTGGATTGGAGGATTTTTTACCAATTTTTATGTTAGATATCATT 2377
||||||||||| |||||||||||||||||||| | ||||| |||||||| ||| ||||||
Sbjct 2408 TGGATTCGGTTTAAATTTGGATTGGAGGATTTGTAACCAACTTTTATGTAAGAAATCATT 2467
Query 2378 TGAAAGTAA 2386
|||||||||
Sbjct 2468 TGAAAGTAA 2476
> AT3G45760.1 | Symbols: | Nucleotidyltransferase family protein
| chr3:16801996-16804759 REVERSE LENGTH=1425
Length=1425
Score = 931 bits (504), Expect = 0.0
Identities = 728/837 (87%), Gaps = 12/837 (1%)
Strand=Plus/Plus
Query 129 GCTGAGGATAAGAATGTTTCGAGTAAAGCGATTCGAAAGAAGGTTAACAACACTGTGTCA 188
|||| ||| ||||||||||||||||||| ||||| |||||| || || |||||| ||||
Sbjct 22 GCTGGGGAAAAGAATGTTTCGAGTAAAGGGATTCAAAAGAAAGTGAAGAACACTATGTCC 81
Query 189 ATAGCAT-TAAAGAGATATAAGATTGATAGTTATATCTTACTGGACCTTGATAAGGTATT 247
||||||| | ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 82 ATAGCATCT-AAGAGATATAACATTGATAGTTATATCTTACTAGACCTTGATAAGGTATT 140
Query 248 AAATGATGTCTACTGCTCTTTTCGACCGGTTTCTGCTGATTACGATACTAGGAAGGAATT 307
| |||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 141 AGATGATGCCTACAGCTCTTTTCGACCGGTTTCTGCTGATTACAATACTAGGAAGGAATT 200
Query 308 GGTGAAAAACCTTAATGCTATGGCTATAGATATTTATGGTAATTCGGAAGAGAGCAGCCC 367
||| |||||||| |||||||||||||||||||||| |||||| || ||||||||||||||
Sbjct 201 GGTCAAAAACCTCAATGCTATGGCTATAGATATTTTTGGTAAATCAGAAGAGAGCAGCCC 260
Query 368 GGTCCTTGAGGCGTATGGGTCTTTCGTGATGGATATGTATTCCTCTCAGA-GTGATTTGG 426
|||||||||||||||||| ||||| | |||| ||| || |||||| || | | |||||||
Sbjct 261 GGTCCTTGAGGCGTATGGCTCTTTTGCGATGAATACGTTTTCCTCACAAAAG-GATTTGG 319
Query 427 ACGTGTCTATTAACTTCGGTAATGGAACATCTGAACTTCCTCGTGAAAAGAAGCTCGAGA 486
| || ||||||||||| ||| |||||||||||| || ||||||||||||||| || |
Sbjct 320 ATGTATCTATTAACTTTAGTAGCGGAACATCTGAATTTTATCGTGAAAAGAAGCTAGAAA 379
Query 487 TACTTAAAAGATTTGCAAAGAAGCTCCGGGCTCTGCAGGGAG-AAGGGCATGTTAAGAAT 545
| |||| ||||||||||| ||||||||| || || |||| | ||||| ||| | ||||
Sbjct 380 TTCTTACAAGATTTGCAACGAAGCTCCGCTCTTTGGAGGG-GCAAGGGTTTGTCAGGAAT 438
Query 546 GTTGAATCTATCTTCTCTGCTAAGGTGCCAATTATCAAATTCTCTGATCAAGGGACTGGT 605
|||| | ||||||| ||||| ||| |||||| ||| ||||| ||||||||||||||||
Sbjct 439 GTTGTACCTATCTTAAGTGCTAGGGTTCCAATTGTCAGATTCTGTGATCAAGGGACTGGT 498
Query 606 GTTGAATGTGATTTGTCAGTCGAAAATAAAGACGGCATTTTAAATTCACAGATCGTTCGC 665
| |||||||||||| |||| |||| |||||||||||||||| |||||||||| ||||
Sbjct 499 ATCGAATGTGATTTGACAGTTGAAAGCAAAGACGGCATTTTAACTTCACAGATCATTCGG 558
Query 666 ATCATATCTCAAATTGATGGCAGGTTTCAAAAACTTTGTATATTGGTTAAGCATTGGGCC 725
|| |||||||||||||||| |||||||| ||||||||| | ||| ||||||||||||||
Sbjct 559 ATTATATCTCAAATTGATGATAGGTTTCAGAAACTTTGTTTGTTGATTAAGCATTGGGCC 618
Query 726 AAAGCTCATGAAGTTAACAGTGCG-CTACACCGA-ACCCTGAATTCTG-TATCTATAACA 782
| ||| |||| ||||||| |||| | |||| | ||||||||||| | |||||||||||
Sbjct 619 AGAGCACATGGGGTTAACAATGCGTC-ACACA-ATACCCTGAATTC-GATATCTATAACA 675
Query 783 TTGCTAGTCGCTCTTCACTTACAGACTCAAAATCCTCCCATTTTACCTCCATTCTCTATG 842
|||||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||
Sbjct 676 ATGCTAGTCGCTCATCATTTACAGACTCAAAGTCCTCCAATTTTACCTCCATTCTCTACA 735
Query 843 CTATTTAAAGATGGAATTGATCCTCCTAACGTGGAGAAAAGGGCACAAAAGTTCTTAAAC 902
||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||
Sbjct 736 CTATTTAAAGATGGAATCGATCCTCCTATCGTGGAGAAAAGAACACAAAAGTTCTTAAAC 795
Query 903 TGGGGACAGCGTAATCAGGAATCTCTGGGTAGACTGTTTGCAACCTTTTTTATTAAG 959
|||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 796 TGGGGACAACGTAATCAAGAATCTCTTGGTAGACTGTTTGCAACTTTTTTTATTAAG 852
Score = 132 bits (71), Expect = 2e-29
Identities = 163/205 (80%), Gaps = 15/205 (7%)
Strand=Plus/Plus
Query 1065 GTTGAGGATTTTACTA-ACGTGACTCA-AAATGTCGCAAGGCGGGTTAATGGTG-C-A-G 1119
|||||||||||||| | ||||| || | |||| | |||| ||||| | ||| | | |
Sbjct 853 GTTGAGGATTTTAC-AGACGTGGCT-AGAAATTTTGCAA---GGGTTTTTAGTGACTACG 907
Query 1120 GAGCCAAAAAGATATACAGCTCCATAAACAGAACCGTCGAAGACATCTTTGAATTCCTCA 1179
||||| |||||||||||||||||||||||||||| || || || || || || |||||||
Sbjct 908 GAGCCGAAAAGATATACAGCTCCATAAACAGAACAGTAGATGATATATTGGAGTTCCTCA 967
Query 1180 ATGACAAGGTTGCTGGA-ACAGATCTCAGACATAGGTTGTTTGGCAAAGGAGCTGTTGTG 1238
||| ||||||||||||| | | |||||| ||| | ||||||| || || | ||||||||
Sbjct 968 ATGGCAAGGTTGCTGGAGA-ACATCTCACACAAAAGTTGTTTAGCCAACAAACTGTTGTG 1026
Query 1239 CAG---ATTCCTCCTGGGGCGCCAC 1260
|| |||||||||| | ||||||
Sbjct 1027 GAGCCTATTCCTCCTGTGTCGCCAC 1051
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118473286200
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5