BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484964
Length=3377
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45850.1 | Symbols: | P-loop containing nucleoside triphosp... 5439 0.0
> AT3G45850.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:16855612-16861527
REVERSE LENGTH=3675
Length=3675
Score = 5439 bits (2945), Expect = 0.0
Identities = 3242/3386 (96%), Gaps = 17/3386 (1%)
Strand=Plus/Plus
Query 1 ATGGATTCGATTCAGCAACGAAGAGGTGGGATTGTATCTCTTTCTCCAGCTCAGACACCA 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 297 ATGGATTCGATTCAGCAACGAAGAGGTGGGATTGTATCTCTCTCTCCAGCTCAGACACCA 356
Query 61 CGATCAAGTGATAAAGCGGCTAGAGAATCGAGATCTTCTGAATCAAATTCCACTAATAGA 120
||||||||||| ||| | || ||||||||||||||||||||||||||||| || ||||||
Sbjct 357 CGATCAAGTGACAAATCAGCAAGAGAATCGAGATCTTCTGAATCAAATTCAACCAATAGA 416
Query 121 AATGATAAAGAAAAGGGTGTGAATGTGCAGGTCATATTGCGTTGCAGGCCATTGAGTGAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 417 AATGATAAAGAAAAGGGTGTGAATGTGCAGGTCATATTGCGTTGCAGGCCATTGAGTGAG 476
Query 181 GATGAGGCTAGAATACATACACCGGTGGTGATTTCTTGTAATGAGAACCGTAGAGAAGTT 240
||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 477 GATGAAGCTAGAATTCATACACCGGTGGTGATTTCTTGTAACGAGAACCGTAGAGAAGTT 536
Query 241 GCTGCCACTCAGAGTATTGCTGGAAAGCATATTGATAGACATTTTGCTTTCGATAAGGTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GCTGCCACTCAGAGTATTGCTGGAAAGCATATTGATAGACATTTTGCTTTCGATAAGGTC 596
Query 301 TTTGGTCCGGCATCTCAACAGAAGGACTTATATGACCAAGCCATTTGCCCAATTGTGTTT 360
|| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 597 TTCGGTCCAGCATCTCAACAGAAGGACTTATATGACCAAGCCATTTGTCCAATTGTGTTT 656
Query 361 GAAGTACTTGAGGGTTACAACTGTACCATCTTTGCGTATGGTCAGACCGGAACTGGGAAG 420
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 657 GAAGTACTTGAGGGTTACAACTGTACCATATTTGCGTATGGTCAGACCGGAACTGGAAAG 716
Query 421 ACGTATACGATGGAAGGAGGTGCAAGGAAAAAGAATGGTGAGTTCCCAAGTGATGCAGGT 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 717 ACGTATACGATGGAAGGAGGTGCAAGGAAAAAGAATGGTGAGTTCCCGAGTGACGCAGGT 776
Query 481 GTTATTCCAAGAGCTGTTAAGCAAATTTTCGACATATTAGAAGCTCAGGGGGCTGAATAT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 777 GTTATTCCAAGAGCTGTTAAGCAAATTTTCGACATATTAGAAGCTCAGGGGGCTGAATAT 836
Query 541 AGCATGAAGGTCACCTTCCTAGAACTATATAATGAGGAAATCTCAGATCTTTTAGCACCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 AGCATGAAGGTCACCTTCCTAGAACTATATAATGAGGAAATCTCAGATCTTTTAGCACCA 896
Query 601 GAGGAGACTATAAAATTTGTTGATGAGAAGTCTAAAAAATCGATTGCCCTCATGGAAGAC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 GAGGAGACTATAAAATTTGTTGATGAGAAGTCTAAAAAATCGATTGCCCTCATGGAAGAC 956
Query 661 GGGAAAGGAAGTGTCTTTGTCCGTGGCTTAGAAGAAGAGATAGTGAGTACAGCGAATGAG 720
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 957 GGGAAAGGAAGTGTCTTTGTCCGTGGGTTAGAAGAAGAGATAGTAAGTACAGCGAATGAG 1016
Query 721 ATATACAAGATCTTGGAAAAAGGTTCCGCGAAAAGGCGTACAGCTGAAACTCTTTTGAAC 780
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 ATATACAAGATCTTAGAAAAAGGTTCCGCGAAAAGGCGTACAGCTGAAACTCTTTTGAAT 1076
Query 781 AAGCAAAGTAGTCGCTCTCATTCAATATTTTCCATCACCATTCACATCAAGGAAAACACT 840
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||
Sbjct 1077 AAGCAAAGTAGTCGCTCTCATTCAATATTTTCCATAACCATTCACATTAAGGAAAATACT 1136
Query 841 CCAGAGGGAGAAGAGATGATTAAATGTGGGAAACTAAATCTTGTTGACCTTGCTGGCTCC 900
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1137 CCAGAGGGAGAAGAGATGATCAAATGTGGGAAACTAAATCTTGTTGACCTTGCTGGTTCC 1196
Query 901 GAGAATATCTCACGCTCTGGTGCACGAGAGGGACGAGCCAGGGAAGCTGGAGAGATCAAC 960
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1197 GAGAATATCTCACGTTCTGGTGCACGAGAGGGACGAGCCAGAGAAGCTGGAGAGATCAAC 1256
Query 961 AAGAGTTTACTTACTCTTGGACGTGTCATTAACGCCCTTGTTGAGCACTCTGGTCATATT 1020
|||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct 1257 AAGAGTTTACTTACTCTTGGCCGTGTCATTAACGCGCTTGTGGAGCACTCTGGTCATATT 1316
Query 1021 CCTTACAGAGATAGCAAATTGACAAGGCTCTTGAGGGATTCATTGGGAGGAAAGACGAAA 1080
||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||
Sbjct 1317 CCTTACAGAGATAGCAAATTGACGAGGCTCTTGAGAGAATCATTGGGAGGAAAGACGAAA 1376
Query 1081 ACATGTGTAATCGCCACAATTTCACCTTCCATCCACTGTTTAGAAGAGACTCTAAGCACT 1140
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 ACTTGTGTAATCGCCACAATTTCACCTTCCATCCACTGTTTAGAAGAGACTCTAAGCACT 1436
Query 1141 TTGGATTATGCACATCGTGCCAAGAATATCAAGAACAAACCAGAGATCAACCAGAAGATG 1200
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 TTGGATTATGCACATCGCGCCAAGAATATCAAGAACAAACCAGAGATCAACCAGAAGATG 1496
Query 1201 ATGAAATCTGCTGTCATGAAAGATCTGTACTCTGAGATTGACCGACTGAAGCAAGAGGTA 1260
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1497 ATGAAATCTGCTGTCATGAAAGATCTGTACTCTGAGATTGACAGACTGAAGCAAGAGGTA 1556
Query 1261 TATGCTGCGAGAGAGAAGAATGGGATTTATATTCCAAAAGACCGCTATATTCAAGAAGAA 1320
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1557 TATGCTGCAAGAGAGAAGAATGGGATTTATATTCCAAAAGACCGCTACATTCAAGAAGAG 1616
Query 1321 GCTGAGAAAAAGGAAATGGCTGAAAAGATAGAAAGATTAGAACTTCAATCAGAATCTAAA 1380
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1617 GCTGAGAAAAAGGCAATGGCTGAAAAGATAGAAAGATTAGAACTTCAATCAGAATCCAAG 1676
Query 1381 GACAAGCGAGTAGTTGACCTTCAGGAGCTATACAATTCTCAGCAGCTTTTAACTGCGGAA 1440
||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 1677 GACAAGCGAGTCGTTGACCTTCAGGAGCTATACAATTCTCAGCAGATTTTAACTGCAGAG 1736
Query 1441 TTGAGTGAGAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGAGCACTCATTGTTT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 TTGAGTGAGAAACTTGAAAAAACTGAGAAAAAGCTTGAGGAAACTGAGCACTCATTGTTT 1796
Query 1501 GATCTTGAAGAAAAATACAGACAGGCAAATGCAACCATTAAAGAGAAGGAATTTGTAATT 1560
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1797 GATCTTGAAGAGAAATACAGACAGGCGAATGCAACCATTAAAGAGAAGGAATTTGTGATA 1856
Query 1561 TCTAATCTCCTCAAGTCAGAAAAATCACTTGTCGAGCGAGCCTTTCAGCTGCGAACAGAA 1620
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1857 TCTAATCTCCTCAAGTCAGAAAAATCACTTGTCGAGCGAGCCTTTCAGCTACGCACAGAA 1916
Query 1621 CTAGAAAGTGCAGCATCAGATGTTTCCAACTTGTTTTCCAAAATAGAAAGAAAGGACAAA 1680
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 CTAGAAAGTGCATCATCAGATGTTTCCAACTTGTTTTCCAAAATAGAAAGAAAGGACAAA 1976
Query 1681 ATTGAAGATGGAAATAGATCTCTCATCCAAAAGTTCCAGTCACAGCTCACACAACAGCTT 1740
|| || |||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 ATCGAGGATGGAAACAGATTTCTCATCCAAAAGTTCCAGTCACAGCTCACACAACAGCTT 2036
Query 1741 GAGCTATTGCATAAGACTGTTGCTTCTTCTGTTACTCAACAAGAGGTTCAACTAAAACAC 1800
|||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||
Sbjct 2037 GAGCTATTGCATAAGACTGTGGCTTCTTCGGTGACTCAACAAGAGGTTCAACTAAAACAC 2096
Query 1801 ATGGAGGACGACATGGAGTCCTTTGTGGCGACAAAATCTGAGGCTACTGAAGAACTCCGT 1860
|||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2097 ATGGAGGAAGACATGGAGTCCTTTGTGTCGACAAAATCTGAGGCTACTGAAGAACTCCGT 2156
Query 1861 GATAGACTTTTAAAACTGAAGACAGTGTATGGCTCTGGCATCGAAGCTCTTGATAACATA 1920
|||||||||| ||||||||||| ||| ||||| |||||||| ||||||||||||||||||
Sbjct 2157 GATAGACTTTCAAAACTGAAGAGAGTTTATGGTTCTGGCATTGAAGCTCTTGATAACATA 2216
Query 1921 GCTGTGAAACTAGATGGAAATTCTCAATCAACATTTGGTAGCCTGAACTCAGAAGTTTCG 1980
|||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||
Sbjct 2217 GCTGTGAAGCTAGATGGAAATTCTCAGTCAACATTTAGTAGCCTTAACTCAGAAGTTTCG 2276
Query 1981 AAACATTCGCATGAACTTGAGAATGTTTTCAAGGGTTTTGCTTCCGAGGCTGACATGTTA 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 AAACATTCGCATGAACTTGAGAATGTTTTCAAGGGTTTTGCTTCCGAGGCTGACATGTTA 2336
Query 2041 CTGCAAGATCTCCAAAGTAGCCTTAACAAACAGGAAGAGAAGCTTATTACATTTGCTCAG 2100
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2337 CTGCAAGATCTCCAAAGTAGCCTTAACAAACAGGAAGAGAAGCTTATTACATTTGCACAG 2396
Query 2101 CAGCAACGGAAGGCACACTCTCGAGCTGTGGATACAGCAAGGTCAGTTTCAAAAGTAACA 2160
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2397 CAGCAACGGAAGGCACACTCGCGAGCTGTGGATACAGCAAGGTCAGTTTCAAAAGTAACA 2456
Query 2161 GTAGAATTCTTCAAGACTCTAGACACACATGCTACCAAATTAACCGGGATAGTAGAAGAG 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 GTAGAATTCTTCAAGACTCTAGACACACATGCTACCAAATTAACCGGGATAGTAGAAGAG 2516
Query 2221 GCACAGACAGTTAACCACAAGAAATTGAGCGAATTTGAAAACAAGTTTGAGGAATGTGCT 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GCACAGACAGTTAACCACAAGAAATTGAGCGAATTTGAAAACAAGTTTGAGGAATGTGCT 2576
Query 2281 GCGAATGAAGAGAGGCAATTGCTAGAGAAAGTAGCAGAACTTCTGGCAAACTCTAATGCC 2340
|| ||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 2577 GCAAATGAAGAGAGACAATTGCTAGAGAAAGTAGCAGAGCTTCTTGCAAATTCTAATGCT 2636
Query 2341 AGGAAGAAAAACCTTGTCCAAATGGCTGTACACGATCTACGCGAGAGCGCATCCACCAGA 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2637 AGGAAGAAAAACCTTGTCCAAATGGCTGTACACGATCTACGCGAGAGCGCATCCACCAGA 2696
Query 2401 ACGACCACCCTGCAGCATGAGATGTCAACGATGCAAGATTCAACTTCTACCATTAAAGCT 2460
|| || ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 2697 ACTACTACCCTACAGCATGAGATGTCAACAATGCAAGATTCAACTTCTTCCATTAAAGCA 2756
Query 2461 GAGTGGAGCCTGCACATGGAGAAAACAGAATCAAGCCATCATGAGGACACTTCAGCGGTT 2520
||||||||| | |||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct 2757 GAGTGGAGCATTCACATGGAGAAAACAGAATCAAGCCACCACGAGGACACTTCAGCAGTT 2816
Query 2521 GAGAGCGGGAAGAAAGCTATGCAAGAAGTTCTCTTAAACTGTTTGGAGAAGGCCGAGATG 2580
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2817 GAGAGCGGGAAGAAAGCTATGCAAGAAGTTCTCTTAAACTGTTTGGAGAAGACCGAGATG 2876
Query 2581 AGTGCGCATCAATGGAGGAAAGCTCAAGAATCACTAGTCAGTCTAGAACGAAACAACGTG 2640
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 2877 AGTGCACATCAATGGAGGAAAGCTCAAGAATCACTTGTCAGTCTAGAACGAAACAATGTG 2936
Query 2641 GCTTCTGTTGACTCCATTGTTAGAGGTGGCATGGATGCCAATGAGAACCTACGCACTAAA 2700
||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||
Sbjct 2937 GCTTCTGTTGACTCCATCGTTAGAGGTGGCATGGATGCCAATGAGAACCTACGCTCTCAA 2996
Query 2701 TTCTCGTCCGCTGTATCATCCTCTCTTGATGTTTTTGATGCTGCAAATAGCAGCCTCCTT 2760
|||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2997 TTCTCGACCGCTGTTTCATCCTCTCTTGATGTTTTTGATGCTGCAAATAGTAGCCTCCTT 3056
Query 2761 ACTTCCATTGATCATTCATTGCAACTAGATAACGATGCATGTACAAAGGTCAACTCCATG 2820
|||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 3057 ACTTCCATCGATCATTCATTGCAACTCGATAATGATGCATGTACAAAGGTCAACTCCATG 3116
Query 2821 ATCATTCCATGCTGTGAAGACTTGATAGAGCTCAAGAGTGATCACAATCATAAGATTGTA 2880
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 3117 ATCATTCCATGCTGTGAAGACTTGATAGAGCTAAAGAGTGATCACAATCACAAGATCATA 3176
Query 2881 GAGATCACAGAGAATGCAGGGAAATGTCTTCTTGATGAATATGTAGTGGATGAACCATCA 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3177 GAGATCACAGAGAATGCAGGGAAATGTCTTCTTGATGAATATGTAGTGGATGAACCATCA 3236
Query 2941 TGTTCAACGCCAAGGAAAAGACCAATCGACATACCGAGCATTGAGTCCATCGAAGAACTT 3000
||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 3237 TGTTCAACGCCAAAGAAAAGACCAATCGACATACCAAGCATTGAGTCCATCGAAGAGCTT 3296
Query 3001 AGAACTCCAGCATCTGAGGAGTTACTGAGAGTGTTTAGAGATGAGAAATTGTTGAAGCAA 3060
||||||||||||||||||||||||||||||| |||| | |||||||| |||| |||||||
Sbjct 3297 AGAACTCCAGCATCTGAGGAGTTACTGAGAGCGTTTCGTGATGAGAAGTTGTCGAAGCAA 3356
Query 3061 GCCAATGGGGATGCAAAGCAGCAGCAGCA--A-CAACAACA-C-C-TTATACTCGCTTCG 3114
||||||||||||||||||||||||||||| | |||||||| | | |||||| |||||||
Sbjct 3357 GCCAATGGGGATGCAAAGCAGCAGCAGCAGCAGCAACAACAACACCTTATACGCGCTTCG 3416
Query 3115 TCTCTTTACGAGGCAGCTGTGTCGGATTCAAGATTTCCCCTCTCTGCTGTTAACTGAAAC 3174
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3417 TCTCTTTACGAGGCAGCTGTGTCGGATTCAAGATATCCCCTCTCTGCTGTTAACTGAAAC 3476
Query 3175 ATCAAGAGGTTTGGTATTACAAAACCAAAGAGAAGGTTAAGTGTTACACTGTACAGAGAG 3234
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 3477 ATCAAGAGGTTTGGTATTACAAAACCCAAGGGAAGGTTAAGTGTTACACTGTACAGAGAG 3536
Query 3235 --TGTCGTTGCATTACACGTTaaaaaaaaaaaCTTTTATTCATGGAGTTTTGGTTT-CGA 3291
||| |||||||||||||| ||||| ||||||||||||||||||||||| | |
Sbjct 3537 AGTGTTGTTGCATTACACGT-AAAAACCTT---TTTTATTCATGGAGTTTTGGTTTTC-A 3591
Query 3292 GGAATTAAAAACATCAGTGttttttatttaatattctttattgtttatttatttGTACTA 3351
||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 3592 GGAGTTTAAAACATCAGT-TTTT--ATTTAATATTCTTTATTGTTTATTTATTTGTACTA 3648
Query 3352 GAGAAAATATGGAAATGAATACAAAT 3377
||||||||||||||||||||||||||
Sbjct 3649 GAGAAAATATGGAAATGAATACAAAT 3674
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 168059259050
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5