BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg484972
Length=2508
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45940.1 | Symbols: | Glycosyl hydrolases family 31 protei... 3338 0.0
AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 ... 1064 0.0
> AT3G45940.1 | Symbols: | Glycosyl hydrolases family 31 protein
| chr3:16886226-16889171 REVERSE LENGTH=2607
Length=2607
Score = 3338 bits (1807), Expect = 0.0
Identities = 2123/2275 (93%), Gaps = 23/2275 (1%)
Strand=Plus/Plus
Query 1 ATGGCTTCTTCTCTTTCTCTTCTTGTGGCTATTATCCTCTGCTTCTCATCTCTCCGGTGT 60
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 1 ATGGCTTCTTGTCTTTCTCTTCTTGTTGCTATTATCCTCTGCTTCTCATCTCTCCAGTGT 60
Query 61 TCCAACGCCATCGGCAAAGGCTACCGTCTAATCTCCATTGAGAAGTCTCCCGATGATGGT 120
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 61 TCCAACGCCATCGGCAAAGGCTACCGTCTGATCTCCATGGAGAAGTCTCCCGATGATGGC 120
Query 121 GGCTTCATTGGCTTTCTCCAAGTGAAGCAGAGTAACAAAATCTATGGCTCTGATATAACC 180
|||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 121 AGCTTCATTGGCTATCTCCAAGTGAAGCAGAGTAACAAAATCTACGGCTCTGATATAACC 180
Query 181 ATCCTTCGACTCTTCATCAAGC-ACGA-AACGGATCATCGCCTTCGTGTTCACATAACAG 238
|||||||||||||||||||| | || | |||||||||||||||||| |||||||| ||||
Sbjct 181 ATCCTTCGACTCTTCATCAA-CTAC-AGAACGGATCATCGCCTTCGCGTTCACATTACAG 238
Query 239 ACGCAAAGAGACAACGATGGGAAGTTCCGTACAATCTCCTCCGCCGAGAACAACCACCGA 298
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 239 ACGCAAAGAAACAACGATGGGAAGTTCCGTACAATCTCCTCCGCCGGGAACAACCACCGA 298
Query 299 GA-GTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAGGAAATATCCGGACCGGAG 357
| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 299 -ATGTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAAGAAATATCCGGACCGGAG 357
Query 358 TTGATATTGAGCTTCACCACAGATCCTTTCAGCTTCGCCGTGAGAAGAAGATCCAACCGC 417
|||| || | ||||||| ||||||||||||||||||||| ||||||||||||||| ||
Sbjct 358 CTGATTTTAATCTTCACCGTAGATCCTTTCAGCTTCGCCGTAAGAAGAAGATCCAACGGC 417
Query 418 GAGACGATTTTCAACACTAGTAGCTCTGATGAGAAC-TTCGGAGAGATGGTGTTCAAGGA 476
|||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||
Sbjct 418 GAGACGATTTTCAACACTAGTAGCTCCGATGAG-TCATTCGGAGAGATGGTGTTCAAGGA 476
Query 477 TCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTGTATGGATTTGGTGA 536
|||||||| |||||||||||||| |||| |||||| ||||||| || |||||||||||
Sbjct 477 CCAGTACCTCGAGATCTCAACTTCTTTACCTAAAGACGCGTCTCTATACGGATTTGGTGA 536
Query 537 AAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTACACTCTTTTCACTGA 596
|||||| ||| ||||||||||||| || |||||||||||||| |||||||| ||||||||
Sbjct 537 AAACTCTCAAGCCAATGGAATCAAACTGGTTCCTAATGAGCCATACACTCTCTTCACTGA 596
Query 597 AGACGTCTCGGCGTTTAAACTCAACACCGATCTTTACGGGTCACACCCTGTTTACATGGA 656
|||||||||||||||||| |||||||| |||||||||||||| || || |||||||||||
Sbjct 597 AGACGTCTCGGCGTTTAATCTCAACACTGATCTTTACGGGTCGCATCCGGTTTACATGGA 656
Query 657 TTTGAGAAACGTTAGAGGTAAATCCTACGCACACTCTGTTCTGCTTCTCAACAGTAATGG 716
||||||||||||||| |||||| |||| |||||||||||||||||||| |||||| ||||
Sbjct 657 TTTGAGAAACGTTAGTGGTAAAGCCTATGCACACTCTGTTCTGCTTCTTAACAGTCATGG 716
Query 717 TATGGATGTGCTTTACAGAGGCGGTTCCTTGACGTACAAGGTAATTGGAGGTGTTTTCGA 776
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 717 TATGGATGTGTTTTACAGAGGCGATTCCTTGACGTACAAGGTAATTGGAGGTGTTTTTGA 776
Query 777 TTTCTATTTCTTTGCTGGACCGTCGCCTCTCAATGTCGTTGATCAATACACTTCGTTAAT 836
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 777 TTTCTATTTCTTCGCTGGACCGTCGCCTCTTAATGTCGTTGATCAATACACTTCGTTAAT 836
Query 837 CGGAAGGCCAGCACCAATGCCGTACTGGTCTCTAGGGTTTCATCAATGTAGATGGGGATA 896
||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 837 AGGACGGCCAGCGCCAATGCCGTACTGGTCTCTAGGGTTTCACCAATGTAGATGGGGGTA 896
Query 897 CCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTATCAAAAGGCTAAGATCCCTCT 956
|||||||||||||||| || |||| |||||||||||||| ||||||||||||||||||||
Sbjct 897 CCGTAATGTATCAGTTGTTAAAGATGTGGTGGATAATTACCAAAAGGCTAAGATCCCTCT 956
Query 957 TGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCACATTGGATCT 1016
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 957 TGATGTGATTTGGAACGATGCTGATTACATGGATGGTTACAAGGACTTCACTTTGGATCT 1016
Query 1017 TGTGAACTTTCCTCATGCTAAGCTATTG-GCTTTCTTGGATAGAATCCACAAGATGGGAA 1075
|||||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||||
Sbjct 1017 TGTGAATTTTCCTCATGCTAAGCTATTGAG-TTTCTTGGATAGAATCCATAAGATGGGAA 1075
Query 1076 TGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTCAACGCGAGCTACGGTGTTTACC 1135
||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct 1076 TGAAGTATGTTGTGATAAAAGATCCTGGTATTGGTGTCAACGCGAGTTACGGTGTATACC 1135
Query 1136 AAAGAGGCATGGCTAATGATGTGTTCATTAAATATGAAGGAAAGCCTTTCTTGGCTCAAA 1195
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 AAAGAGGCATGGCTAGTGATGTGTTCATTAAATATGAAGGAAAGCCTTTCTTGGCTCAAG 1195
Query 1196 TGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCAACCCAAAAACGGTGTCTTGGTGGG 1255
||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct 1196 TGTGGCCTGGTCCAGTTTACTTCCCTGATTTCCTTAACCCGAAAACGGTTTCTTGGTGGG 1255
Query 1256 GTGATGAAATCCGACGTTTCCATGAATTAGTCCCCATTGATGGTCTTTGGATCGACATGA 1315
| |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1256 GCGATGAAATTCGACGTTTCCATGAGTTAGTACCCATTGATGGTCTTTGGATCGACATGA 1315
Query 1316 ATGAGATCAATGCTACTGGAAACAAAGCTCCTCTTGGATTCAAGACTATTCCCACAAGTG 1375
|||||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||
Sbjct 1316 ATGAGATCAATGCTACTGGACACAAAGCTTCTCTAGGGTTCAAGACTATTCCCACAAGTG 1375
Query 1376 CTTATCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGG 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 CTTATCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGG 1435
Query 1436 CCATCTCGACCCATAAGGCCTTACTTGATGTCCAAGGCAAACGTCCCTTCATATTGTCAC 1495
|||| ||||||| |||||||| |||| |||||||||||||||||| || ||||||||||
Sbjct 1436 CCATAGCGACCCACAAGGCCTTGCTTGCTGTCCAAGGCAAACGTCCATTTATATTGTCAC 1495
Query 1496 GGTCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAGGGAA 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1496 GGTCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAAGGAA 1555
Query 1556 CATGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAACTTCGGAATTTTTGGAGTTC 1615
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1556 CATGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAATTTTGGAATTTTTGGAGTTC 1615
Query 1616 CTATGGTTGGTTCAGACATATGTGGATTCTTTCCTCCAACACCAGAAGAACTCTGCAACC 1675
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 CTATGGTTGGTTCAGATATATGTGGATTCTTTCCTCCAACACCAGAAGAACTCTGCAACC 1675
Query 1676 GTTGGATTGAAGTCGGTGCGTTTTACCCCTTTTCAAGAGATCATGCCGATTACTATGCGC 1735
||||||||||||| ||||||||||||||||||||||||||||| || |||||||| || |
Sbjct 1676 GTTGGATTGAAGTTGGTGCGTTTTACCCCTTTTCAAGAGATCACGCTGATTACTACGCTC 1735
Query 1736 CAAGAAAAGAGCTTTACCAATGGGGAACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGA 1795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1736 CAAGAAAAGAGCTTTACCAATGGGGAACAGTAGCAGAGTCAGCTCGTAACGCTCTTGGGA 1795
Query 1796 TGAGATACAAACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGACCGGTG 1855
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1796 TGAGATACAAACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGAGTGGTG 1855
Query 1856 CACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGA-TTACACCGAGTGCTACGGTTTG 1914
|||| ||||||||||||||||||||||| |||||||| || ||| || ||||||||||||
Sbjct 1856 CACCAATCGCTAGACCGCTCTTCTTCTCTTTCCCTGAGTT-CACTGAATGCTACGGTTTG 1914
Query 1915 AGCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCACCAGTTCTTGAACAAGGTAAA 1974
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1915 AGCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCGCCGGTTCTTGAACAAGGTAAA 1974
Query 1975 ACCCAAGTTGAAGCTCTGTTCCCACCAGGTTCTTGGTACCACATTTTTGACATGACTCAG 2034
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1975 ACCCAAGTTGAAGCACTGTTCCCACCAGGTTCTTGGTACCACATGTTTGACATGACTCAG 2034
Query 2035 GTCGTTGTTTCCAAGAACGGGAAGCGCGTGACTCTCCCAGCTCCGTTGAACGTTGTGAAC 2094
||||||||||| |||||||||| || | || ||||| |||||||| ||||||||||||
Sbjct 2035 GTCGTTGTTTCAAAGAACGGGAGGCTTTTCACCCTCCCCGCTCCGTTTAACGTTGTGAAC 2094
Query 2095 GTGCATCTTTACCAGAACACGATATTACCAATGCAACAAGGTCGTCTGGTCGTCACTTTC 2154
|||||||||||||||||| ||||| |||| |||||||||| ||||| | | | || |
Sbjct 2095 GTGCATCTTTACCAGAACGCGATACTACCCATGCAACAAG-TCGTC-G--C-T---TT-C 2145
Query 2155 CCGGCTAGAGCATCAGAGGGATACGCCACCGGGAAACTCTTTCTTGACGATGATGAACTT 2214
||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |||
Sbjct 2146 CCGGCGGGAGCATCAGAGGGATACGCCTCCGGGAAACTCTTTCTTGATGATGATGAGCTT 2205
Query 2215 CCAGAGATGAAAATTGGAAACGG-ACAGTCAACATACGTTGACTTCTACGCATCG 2268
|| ||||||||| |||||||||| | ||||||| ||| |||||||||||||||||
Sbjct 2206 CCGGAGATGAAACTTGGAAACGGGA-AGTCAACGTACATTGACTTCTACGCATCG 2259
Score = 246 bits (133), Expect = 7e-64
Identities = 147/154 (95%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 2344 ACCAAGAGGATTGAGGTAAGCTCCAAGGATCAGAAGTATGTGGTGGGTTCGGAAGATAAA 2403
||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||||| ||
Sbjct 2416 ACCAAGACGATTGAGGTAAGCTCCAAGGAGCAGATGTATGTGGTGGGTTCTGAAGATGAA 2475
Query 2404 GGAGAGAGTAAGAGCTTCATGGTTGAGCTTAAGGGCCTTGAGATACTAGTGGGTAAGGAC 2463
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2476 GGAGAGAGTAAAAGCTTCATGGTTGAGCTTAAGGGCCTTGAGATGCTAGTGGGTAAGGAC 2535
Query 2464 TTCAACATATCTTGGAAAATGGCTAGTACTAATG 2497
||||||||||||||||||||||||||||||||||
Sbjct 2536 TTCAACATATCTTGGAAAATGGCTAGTACTAATG 2569
> AT1G68560.1 | Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase
1 | chr1:25734182-25738002 REVERSE LENGTH=3106
Length=3106
Score = 1064 bits (576), Expect = 0.0
Identities = 1106/1350 (82%), Gaps = 83/1350 (6%)
Strand=Plus/Plus
Query 6 TTCTTCTCTTTCTCTTCTTGTGGCTATT-ATCCTCTGCTTCTCATCTC-TCCGGTGTTCC 63
||| ||||||||||||||| | ||| || |||||||| |||||| | | || | | |
Sbjct 133 TTC-TCTCTTTCTCTTCTTCTAGCT-TTAATCCTCTGTTTCTCA-CCCACCCAATCCTAC 189
Query 64 AACGCCATCGGCAAAGGCTACCGTCTAATCTCCATTG-AGAAGTCTCCCGATGATGGTGG 122
|| |||||||||||||||||||| | ||||||| | |||| |||||| || |||||
Sbjct 190 AAAACCATCGGCAAAGGCTACCGTTTGGTCTCCATCGAAGAA-TCTCCC---GACGGTGG 245
Query 123 CTTCATTGGCTT-TCTCCAAGTGAAGC-AGAGTAACAAAATCTATGGCTCTGATATAACC 180
|||||||| || ||||||||| || | | || ||||||||||| ||||||||||| |||
Sbjct 246 TTTCATTGG-TTATCTCCAAGTCAAACAAAAG-AACAAAATCTACGGCTCTGATATCACC 303
Query 181 ATC-CTTCGACTCTTCATCAAGCACGAAACGGA-TCATCGCCTTCGTGTTCACATAACAG 238
| | ||||| |||||| ||||||||||||| || ||| || |||||||||||||| || |
Sbjct 304 A-CTCTTCGTCTCTTCGTCAAGCACGAAACTGATTCA-CGTCTTCGTGTTCACATCACTG 361
Query 239 ACGC-AAAGAGACAACGATGGGAAGTTCCGTACAATCTCCTCCGC-CGAGAAC-A--ACC 293
|||| ||| | |||||||||||||||||| ||||||||||||| | ||||||| | |||
Sbjct 362 ACGCGAAACA-ACAACGATGGGAAGTTCCATACAATCTCCTCC-CACGAGAACAACCACC 419
Query 294 AC----C-G-AGAGTAATCGGAAAATCAAGAAAATCTCCGGTTACGGTACAGGAAATATC 347
|| | | | ||| ||||||||||||||||||||||| | || || || ||||| ||
Sbjct 420 ACAAGTCGGAAAAGTCATCGGAAAATCAAGAAAATCTCCAATCACAGTTCAAGAAATCTC 479
Query 348 CGGA-CCGGAGTTGATATTGAGCTT-CACCACAGATCCTTTCAGC-TTCGCCGTGAGAA- 403
|||| ||| | || || || || || ||| |||||||| |||| | |||||||||| ||
Sbjct 480 CGGATCCGAACTT-ATCTTCAG-TTACACAACAGATCCATTCA-CTTTCGCCGTGA-AAC 535
Query 404 GAAGATCCAACCGCGAGACGA-TTTTCAACACTAGTAGCTCTGATGAGAACTTCGGAGAG 462
| ||||| |||| ||| || | | |||||||| | | | | || | || |
Sbjct 536 GTAGATCTAACCACGAAAC-ACTCTTCAACAC-A--A---C--A--AG--C-TC----A- 576
Query 463 ATGGTGTTCAAGGATCAGTACCTTGAGATCTCAACTTCACTACCCAAAGACTCGTCTCTG 522
| |||||||| ||||| ||||| ||||||||||||||| |||| ||||| | || ||
Sbjct 577 TTAGTGTTCAAAGATCAATACCTAGAGATCTCAACTTCATTACCAAAAGAAGCTTCACTC 636
Query 523 TATGGATTT-GGTGAAAACTCACAACCCAATGGAATCAAGCTTGTTCCTAATGAGCCTTA 581
||||| ||| ||||||||||||||| | ||||| ||||| || || ||||| ||||||||
Sbjct 637 TATGG-TTTAGGTGAAAACTCACAAGCTAATGGTATCAAACTCGTACCTAACGAGCCTTA 695
Query 582 CACTCTTTTCACTGAAGACGTCTCGGCGT-TTAAACTCAACACCGATCTTTACGGGTCAC 640
||||||| ||||||||| || || || | | || || ||||| || ||||| || || |
Sbjct 696 TACTCTTTACACTGAAGATGTTTCAGC-TATCAATCTTAACACTGACCTTTATGGTTCGC 754
Query 641 ACCCTG-TTTACATGGATTTGAGAAACGTTAGAGGTAAATCCTACGCACACT-CTGTTCT 698
| || | | || |||||| | ||||||||| |||||||| | || || || | |||||||
Sbjct 755 ATCC-GATGTATATGGATCTAAGAAACGTTGGAGGTAAAGCTTATGCTCA-TGCTGTTCT 812
Query 699 GCTTCTCAACAGTAATGGTATGGATGTGCTT-TACAGAGGCGGTTCCTTGACGTACAAGG 757
||| | || ||||||||||||||||| || || ||||| | ||| |||||||| || |
Sbjct 813 TCTTTTGAATAGTAATGGTATGGATGT-TTTCTATAGAGGTGATTCTTTGACGTATAAAG 871
Query 758 TAATTGGAGGTGTTTTCGATTTCTATTTCTTTGCTGGACCGTCGCC-TCTCAATGTCGTT 816
| || |||||||||||||||||||||||| | || ||||||||||| | | ||||| |||
Sbjct 872 TTATCGGAGGTGTTTTCGATTTCTATTTCATCGCCGGACCGTCGCCGT-TAAATGTTGTT 930
Query 817 GATCAATACACTTC-GTTAATCGGAAGGCCAGCACCAATGCCGTACTGGTCTCTAGGGTT 875
||||| || || || |||||||||||| || || || ||||||||||||||| |||| ||
Sbjct 931 GATCAGTATAC-TCAGTTAATCGGAAGACCTGCTCCTATGCCGTACTGGTCTTTAGGATT 989
Query 876 TCATCAATGTAGATGGGGATACCGTAATGTATCAGTTCTTGAAGAAGTGGTGGATAATTA 935
||||||||||||||||||||||| |||| |||||||| ||||||| ||||||||||||||
Sbjct 990 TCATCAATGTAGATGGGGATACCATAATCTATCAGTTGTTGAAGATGTGGTGGATAATTA 1049
Query 936 TC-AAAAGGCTAAGATCCCTCTTGATGTGATTTGGAACGATGCTGATTACATGGATGGTT 994
| |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||
Sbjct 1050 -CAAAAAGGCTAAGATCCCACTTGATGTGATTTGGAACGATGATGATCACATGGATGGTC 1108
Query 995 ACAAGGACTTCACATTGGATCTTGTGAACTT-TCCTCATGCTAAGCTATTGGCTTTCTTG 1053
|||| || ||||| ||| ||| |||| ||| ||||| ||||||||||||||| ||||||
Sbjct 1109 ACAAAGATTTCACGTTGAATCCTGTG-GCTTATCCTCGTGCTAAGCTATTGGCGTTCTTG 1167
Query 1054 GATAGAATCCACAAGATGGGAATGAAGTATGTTGTGATAAATGATCCTGGTATTGGTGTC 1113
|| | |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct 1168 GACAAAATCCACAAGATTGGAATGAAGTATATTGTGATCAATGATCCTGGTATTGGTGTC 1227
Query 1114 AACGCGAGCTACGGT--GTTTACCAAAGAGGCATGGCTAATGATGTGTTCATTAAATATG 1171
||||| ||||||||| ||| || |||| ||||||| ||||||||| ||||| ||||
Sbjct 1228 AACGCTAGCTACGGTACATTT--CAGAGAGCCATGGCTGCTGATGTGTTTATTAAGTATG 1285
Query 1172 AAGGAAAGCCTTTCTTGGCTCAAATGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTCA 1231
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1286 AAGGAAAGCCATTCTTGGCTCAAGTGTGGCCTGGTCCGGTTTACTTCCCTGATTTCCTTA 1345
Query 1232 ACCCAAAAACGGTGTCTTGGTGGGGTGATGAAATCCGACGTTTCCATGAATTAGTCCCCA 1291
|||| || ||||| ||||||||||||||||||||| ||| |||||||| |||||||| |
Sbjct 1346 ACCCGAAGACGGTTTCTTGGTGGGGTGATGAAATCAAACGGTTCCATGATTTAGTCCCTA 1405
Query 1292 TTGATGGTCTT-TGGATCGACATGAATGAG 1320
|||||||| || ||||| |||||||| |||
Sbjct 1406 TTGATGGT-TTATGGATTGACATGAACGAG 1434
Score = 944 bits (511), Expect = 0.0
Identities = 723/825 (88%), Gaps = 16/825 (2%)
Strand=Plus/Plus
Query 1319 AGATCAATGCTACTGGAAACAAAGCTCCTCTTGGATTCAAGACTATTCCCACAAGTGCTT 1378
|||| ||||||||||| | ||||||| |||| |||||||||||| | |||||||| |
Sbjct 1568 AGATTAATGCTACTGGTGTCGTAGCTCCTGTTGGGTTCAAGACTATTGCTACAAGTGC-T 1626
Query 1379 A-TCACTACAATGGTGTTCGTGAGTACGACGCTCACAGCATCTACGGGTTCTCTGAGGCC 1437
| ||| |||||||||||||| |||||||| |||||||| |||||||| ||||||||| ||
Sbjct 1627 ACTCATTACAATGGTGTTCGAGAGTACGATGCTCACAGTATCTACGGATTCTCTGAGACC 1686
Query 1438 ATCTCGACCCATAAGGCCTTACTTGATGTCCAAGGCAAACGTCCCTTCATATTGTCACGG 1497
||| | || || |||| ||||||| ||||||||||||||||||||||||| || || |||
Sbjct 1687 ATCGCAACTCACAAGGGCTTACTTAATGTCCAAGGCAAACGTCCCTTCATTTTATCCCGG 1746
Query 1498 TCCACTTTTGTTGGTTCAGGTCAATATGCTGCTCACTGGACTGGAGATAACCAGGGAACA 1557
|| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||| ||||||
Sbjct 1747 TCTACTTTCGTTGGTTCGGGTCAATATGCGGCTCACTGGACCGGAGATAACCAAGGAACA 1806
Query 1558 TGGCAGAGCTTGCAAGTATCTATCTCAACGATGTTGAACTTCGGAATTTTTGGAGTTCCT 1617
||||||||||||||||| ||||||||||| |||||||||||||| || |||||||||||
Sbjct 1807 TGGCAGAGCTTGCAAGTGTCTATCTCAACTATGTTGAACTTCGGTATATTTGGAGTTCCC 1866
Query 1618 ATGGTTGGTTCAGACATATGTGGATTCTTTCCTC-CAA-CACCAGAAGAACTCTGCAACC 1675
||||||||||||||||| ||||||||| | || | ||| || ||||||||||||||||||
Sbjct 1867 ATGGTTGGTTCAGACATTTGTGGATTC-TACC-CACAACCAACAGAAGAACTCTGCAACC 1924
Query 1676 GTTGGATTGAAGTCGGTGCGTTTTACCCCTTTTCAAGAGATCATGCCGATTACTA-TGCG 1734
||||||| ||||| || ||||||||||| |||||||||||||| ||| ||||||| | |
Sbjct 1925 GTTGGATCGAAGTAGGCGCGTTTTACCCGTTTTCAAGAGATCACGCCAATTACTACT-CA 1983
Query 1735 CCAAGAAAAGAGCTTTACCAATGGGGA-ACAGTAGCAGAGTCAGCTCGTAACGCTCTTGG 1793
|||||| ||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct 1984 CCAAGACAAGAGCTTTACCAAT-GGGACACAGTTGCAGACTCAGCTCGTAACGCTCTTGG 2042
Query 1794 GATGAGATACAA-ACTCCTTCCTTTTCTCTACACTCTCAACTACGAAGCCCATATGACCG 1852
||||||||||| | |||||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct 2043 TATGAGATACAAGA-TCCTTCCTTTCCTCTACACTCTTAACTACGAAGCGCATATGACTG 2101
Query 1853 GTGCACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGATTACACCGAGTGCTACGGTT 1912
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct 2102 GTGCACCCATCGCTAGACCGCTCTTCTTCTCATTCCCTGAATACACCGAATGTTACGGCA 2161
Query 1913 TGAGCAAACAGTTCTTGCTCGGAAGCAGCTTAATGATATCACCAGTTCTTGAACAAGGTA 1972
|||| |||||||||||| ||||||||||| |||||||| || ||||| || ||||| |
Sbjct 2162 ACAGCAGACAGTTCTTGCTTGGAAGCAGCTTCATGATATCTCCGGTTCTCGAGCAAGGCA 2221
Query 1973 AAACCCAAGTTGAAGC-TCTGTTCCCACCAGGTTCTTGGTACCACATTTTTGACATGACT 2031
||||| |||| ||||| | |||||||||||||||||||||||||||| || |||||||||
Sbjct 2222 AAACCGAAGTAGAAGCAT-TGTTCCCACCAGGTTCTTGGTACCACATGTTCGACATGACT 2280
Query 2032 CAGGTC-GTTGTTTCCAAGAACGGGAAGCGCGTGACTCTCCCAGCTCCGTTGAACGTTGT 2090
|| | | || || |||||||||||||| || || |||||||||||||| |||||| ||||
Sbjct 2281 CAAG-CAGTAGTGTCCAAGAACGGGAAACGTGTAACTCTCCCAGCTCCTTTGAACTTTGT 2339
Query 2091 GAACGTGCATCTTTACCAGAACACGATATTACCAATGCAACAAGG 2135
|||||| ||||||||||| ||||| || ||||||| |||||||||
Sbjct 2340 GAACGTTCATCTTTACCAAAACACTATCTTACCAACGCAACAAGG 2384
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124464185583
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5