BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485021
Length=1199
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46500.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1808 0.0
AT3G46490.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 798 0.0
AT3G46480.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 773 0.0
> AT3G46500.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:17120480-17122745
FORWARD LENGTH=1212
Length=1212
Score = 1808 bits (979), Expect = 0.0
Identities = 1104/1165 (95%), Gaps = 5/1165 (0%)
Strand=Plus/Plus
Query 1 GGAAAACAAAACTCAAGAGGAAGCTTCGACCATCAATGTTTCATCTCTTACTTGCATAGA 60
||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||
Sbjct 1 GGAGAACAAAACTCAAGAGGAAGCTTCGACCATTAATGTTTCATCCCTTGCTTGTATAGA 60
Query 61 TCTCGCCAACACCAATCTTCATCAATCAGCTGATGCGCTTAAGCAGGCTTGTCTCTTCTT 120
|||||||||| |||||||||||| |||||||| | |||||||||||||||| ||||||||
Sbjct 61 TCTCGCCAACTCCAATCTTCATCGATCAGCTGCTTCGCTTAAGCAGGCTTGGCTCTTCTT 120
Query 121 CTTTATTTTTATCAACATCAATGATTATGGCGTGGCTTTTATTACTTATGTGACTCGTTG 180
|||| ||||| ||||| |||||||||| || |||| ||||||| |||||||||| ||||
Sbjct 121 CTTTCTTTTTCTCAACGTCAATGATTACGGTTTGGCCTTTATTAGTTATGTGACTAGTTG 180
Query 181 TTGGTTATTCTTGTTCTAGGCATGTCTAGATTGTGGATTTTTCTATGTCACAAATCATGG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 TTGGTTATTCTTGTTCTAGGCATGTCTAGATTGTGGATTTTTCTATGTCACAAATCATGG 240
Query 241 TATTAGTGAGGAGTTAAAGGACGAGGCTTTCGAGCAAAGCAAGAAGTTCTTTGCTCTTCC 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TATAAGTGAGGAGTTAAAGGACGAGGCTTTCGAGCAAAGCAAGAAGTTCTTTGCTCTTCC 300
Query 301 TTTGGACGAGAAAATGAAAGTCTTGAAAAATGAAAAGCATCAAGGCTATTCACCCGTCCT 360
|||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 301 TTTGGACGAGAAGATGAAAGTCTTGAAAAACGAAAAACATCAAGGCTATTCACCCGTCCT 360
Query 361 TAGTCAAATCTCTGATAACCAAATCCATGGGGATTACAAAGAAAGTTTTTTCATTGGAAT 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TAGTCAAATCTCTGATAACCAAATCCATGGGGATTACAAAGAAAGTTTTTTCATTGGAAT 420
Query 421 CGAAAGCTCCAACGATACACCATTCTGTCGCGCTAACATTTGGCCTAACCCTGATGTTTT 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CGAAGGCTCCAACGATACACCATTCTGTCGCGCTAACATTTGGCCTAACCCTGATGTTTT 480
Query 481 GCCGGGATGGCAGGCGACCATGGAGAAATACCATCAAGAAGCATTGAGGGTTTGTAAGGC 540
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 481 GTCGGGATGGCAGGCGACCATGGAGAAATATCATCAAGAAGCATTGAGGGTTTGTAAGGC 540
Query 541 TATTGCTAGAGTACTGGCATTGGCGCTCGATGTGGATGGAGATTACTTTGATAAACCAGA 600
||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||| ||
Sbjct 541 TATTGCTAGAGTATTGGCATTGGCGCTCAACGTGGATGGAGATTACTTTGATACACCGGA 600
Query 601 AATGCTGGGAAATCCCCTCGCATTTATGCGCTTGCTTCACTATGAAGGGATGTCTGATCC 660
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 601 AATGCTTGGAAATCCCCTCACATTTATGCGCTTGCTTCACTATGAAGGGATGTCTGATCC 660
Query 661 CTCAAAAGGAATATATGGATGCGGCCCACATTCTGATTTCGGAATGATGACTCTCTTAGC 720
|||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||
Sbjct 661 CTCAAAAGGAATATATGGCTGCGGGCCACATTCTGATTTTGGTATGATGACTCTCTTAGG 720
Query 721 AACCGATAGTGTAATGGGGCTCCAGATATGCAAGGATAGAGACGTGAAGCCTAGGAAGTG 780
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 AACGGATAGTGTAATGGGGCTCCAGATATGCAAGGATAGAGACGTGAAGCCTAGGAAGTG 780
Query 781 GGAATATATACCATCGATTAAAGGCGCATATATTGTGAATATTGGTGACTTGCTGGAGCG 840
||||||||||| |||||| ||||| |||||||| |||||||||||||||||||| |||||
Sbjct 781 GGAATATATACTATCGATAAAAGGGGCATATATCGTGAATATTGGTGACTTGCTAGAGCG 840
Query 841 TTGGAGCAATGGCATTTTTAAATCCGCATTGCATCGGGTACTTGGGAATGGTCAAGACCG 900
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 841 TTGGAGCAATGGCATTTTTAAATCCACATTGCATCGGGTACTTGGGAATGGTCAAGACCG 900
Query 901 ATATTCCATTGCATTCTTTCTGCAACCGAGTCACGACTGTATAGTAGAATGTCTTCCTAC 960
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 901 ATATTCCATTGCATTCTTTCTGCAACCTAGTCACGACTGTATAGTAGAATGTCTTCCTAC 960
Query 961 CTGCCAGTCTGAAAACAACCCTCCCAAATATCCAGCTATCAAATGTTCAACGTACCTCAC 1020
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 961 CTGCCAGTCTGAAAACAACCCTCCCAAATATCCAGCTATAAAATGTTCAACGTACCTCAC 1020
Query 1021 CCAACGTTACCAGGATTCACAAGTGGATTTGAGCATCTACAAAAAACAGACCTAAGTGAA 1080
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1021 TCAACGTTACCAGGATTCACAAGTGGATTTGAGCATCTACAAAAAATAGACCTAAGTGAA 1080
Query 1081 AGTCTTTTTTGGAATTTTGTAGAAAGGTCCAATCCCTTCCCACTATATATGAATGCTTTG 1140
||||||||| || |||| ||||||||||||| |||||||||||||| | | |||||||
Sbjct 1081 AGTCTTTTT-GGTTTTTTTTAGAAAGGTCCAAGCCCTTCCCACTATA-A--A-TGCTTTG 1135
Query 1141 GTGTTCTAGTTGGGCTCGTTGTTAA 1165
|| |||||||||||||| | |||||
Sbjct 1136 GTTTTCTAGTTGGGCTCCTCGTTAA 1160
> AT3G46490.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:17115629-17119451
FORWARD LENGTH=993
Length=993
Score = 798 bits (432), Expect = 0.0
Identities = 726/863 (84%), Gaps = 39/863 (5%)
Strand=Plus/Plus
Query 198 AGGCATGTCTAGATTGTGGATTTTTCTATGTCACAAATCATGGTATTAGTGAGGAGTTAA 257
|||||||||| ||| |||||||||||||||||| |||||||||||| |||||||| | |
Sbjct 107 AGGCATGTCTCGATAGTGGATTTTTCTATGTCATAAATCATGGTATAAGTGAGGAACTCA 166
Query 258 AGGACGAGGCTTTCGAGCAAAGCAAGAAGTTCTTTGCTCTTCCTTTGGACGAGAAAATGA 317
|||| |||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||
Sbjct 167 AGGATGAGGCTTTCGAGCACAGCAAGAAGTTCTTCGCTCTTCCTTTGGAAGAGAAGATGA 226
Query 318 AAGTCTTGAAAAATGAAAAGCATCAAGGCTATTCACCCGTCC----TT-AGTC--AAATC 370
||||||||| ||| |||||| ||| ||||||| |||| ||| || || | | |
Sbjct 227 AAGTCTTGAGAAACGAAAAGTATCGAGGCTATGCACCATTCCATGATTCTCTCTTAGA-C 285
Query 371 TCTGATAACCAAATCC-ATGGGGATTACAAAGAAAGTTTTTTCATT--G---GAA--T-- 420
|||| |||||| ||| | ||||| |||||||| ||||| |||| | ||| |
Sbjct 286 CCTGAAAACCAAGTCCGA-GGGGACTACAAAGAGGGTTTTACCATTGGGTTCGAAGGTAG 344
Query 421 CGAA-A--G-CTCCA--ACGATACACCATTCTGTCGCGCTAACATTTGGCCTAACCCTGA 474
| || | | | ||| |||| ||||||| | || | || |||||||||||||||||
Sbjct 345 CAAAGATGGTCCCCATTGGGATAAACCATTCCATAGCCCCAATATTTGGCCTAACCCTGA 404
Query 475 TGTTTTGCCGGGATGGCAGGCGACCATGGAGAAATACCATCAAGAAGCATTGAGGGTTTG 534
|||||||| ||||||| || ||||||||||||||| ||||||||||||||||||||||
Sbjct 405 CGTTTTGCCCGGATGGCGGGAGACCATGGAGAAATATTATCAAGAAGCATTGAGGGTTTG 464
Query 535 TAAGGCTATTGCTAGAGTACTGGCATTGGCGCTCGA-TGTGGATG-GAGATTACTTTGAT 592
|||| ||||||| | | || |||| ||||||||||| | |||||| | ||||||||| ||
Sbjct 465 TAAGTCTATTGCGAAAATAATGGCTTTGGCGCTCGACT-TGGATGTG-GATTACTTTAAT 522
Query 593 AAACCAGAAATGCTGGGAAATCCCCTCGCATTTATGCG-CTTGCTTCACTATGAAGGGAT 651
| |||||| |||||||||||||| | ||| |||| | |||| |||||||||||||||
Sbjct 523 ACACCAGAGATGCTGGGAAATCCAATTGCAGATATG-GTCTTGTTTCACTATGAAGGGAA 581
Query 652 GTCTGATCCCTCAAAAGGAATATATGGATGCGGCCCACATTCTGATTTCGGAATGATGAC 711
|||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||| |
Sbjct 582 GTCTGATCCCTCGAAAGGAATATATGCATGTGGAGCACATTCTGATTTCGGAATGATGTC 641
Query 712 TCTCTTAGCAACCGATAGTGTAATGGGGCTCCAGATATGCAAGGATAGAGACGTGAAGCC 771
|||||||||||| ||| |||| ||||| || |||||||||||||||| ||||||||||||
Sbjct 642 TCTCTTAGCAACTGATGGTGTCATGGGACTTCAGATATGCAAGGATAAAGACGTGAAGCC 701
Query 772 T-AGGAAGTGGGAATATA-TACCATCGATTAAAGGCGCATATATTGTGAATATTGGTGAC 829
| | ||||||||||||| | |||||||||||||| || |||||||||||| |||||||
Sbjct 702 TCA-AAAGTGGGAATATACT-CCATCGATTAAAGGAGCCTATATTGTGAATCTTGGTGA- 758
Query 830 T-TGCTGGAGCGTTGGAGCAATGGCAT-TTTTAAATCCGCATTGCATCGGGTACTTGGGA 887
| |||| ||||||||||| |||||| | ||| ||||| |||||||||||||||| ||||
Sbjct 759 TCTGCTTGAGCGTTGGAGTAATGGC-TATTTCAAATCTACATTGCATCGGGTACTCGGGA 817
Query 888 ATGGTCAAGACCGATATTCCATTGCATTCTTTCTGCAACCGAGTCACGACTGTATAGTAG 947
|||| || ||||||||||| ||| ||||||| ||| |||||||||| ||||||||| |||
Sbjct 818 ATGGGCAGGACCGATATTCTATTCCATTCTTCCTGAAACCGAGTCATGACTGTATAATAG 877
Query 948 AATGTCTTCCTACCTGCCAGTCTGAAAACAACCCTCCCAAATATCCAGCTATCAAATGTT 1007
| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 878 AGTGTCTTCCTACCTGCCAGTCTGAAAACAACCTTCCCAAATATCCAGCGATCAAATGTT 937
Query 1008 CAACGTACCTCACCCAACGTTAC 1030
|||||||| || |||||||||||
Sbjct 938 CAACGTACATCTCCCAACGTTAC 960
> AT3G46480.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:17103173-17105594
FORWARD LENGTH=861
Length=861
Score = 773 bits (418), Expect = 0.0
Identities = 536/593 (90%), Gaps = 8/593 (1%)
Strand=Plus/Plus
Query 475 TGTTTTGCCGGGATGGCAGGCGACCATGGAGAAATACCATCAAGAAGCATTGAGGGTTTG 534
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 264 TGTTTTGCCGGGATGGCGGGCGACCATGGAGAAATATCATCAAGAAGCATTGAGGGTTTG 323
Query 535 TAAGGCTATTGCTAGAGTACTGGCATTGGCGCTCGA-TGTGGATGGAGATTACTTTGATA 593
||||||||||||||| || | |||||||||||||| | |||| | ||||||||||||
Sbjct 324 CAAGGCTATTGCTAGATTATTAGCATTGGCGCTCGACT-TGGACACAAATTACTTTGATA 382
Query 594 AACCAGAAATGCTGGGAAATCCCCTCGCATTTATGCGCTTGCTTCACTATGAAGGGATGT 653
|||| ||||||||||||||||| ||||| ||||||| ||||||| || ||||||||||
Sbjct 383 AACCGGAAATGCTGGGAAATCCTATCGCAGTTATGCGTTTGCTTCGTTACGAAGGGATGT 442
Query 654 CTGATCCCTCAAAAGGAATATATGGATGCGGCCCACATTCTGATTTCGGAATGATGACTC 713
||||||||| |||||||||| |||||| || | |||||||||| ||||||| ||||||
Sbjct 443 CTGATCCCTTGAAAGGAATATTTGGATGTGGAGCTCATTCTGATTACGGAATGCTGACTC 502
Query 714 TCTTAGCAACCGATAGTGTAATGGGGCTCCAGATATGCAAGGAT-AGAGACGTGAAGCCT 772
||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct 503 TCTTAGCAACCGATAGTGTAACCGGGCTCCAGATATGCAAGGATAAG-GACGTGAAGCCT 561
Query 773 AGGAAGTGGGAATATATACCATCGATTAAAGGCGCATATATTGTGAATATTGGTGACTTG 832
||||||||||||||| ||||||| |||||||| |||||||| || ||| |||| ||||||
Sbjct 562 AGGAAGTGGGAATATGTACCATCTATTAAAGGAGCATATATCGTCAATCTTGGAGACTTG 621
Query 833 CTGGAGCGTTGGAGCAATGGCATTTTTAAATCCGCATTGCATCGGGTACTTGGGAATGGT 892
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 622 TTGGAGCGTTGGAGCAACGGCATTTTTAAATCCACATTGCATCGGGTACTTGGGAATGGT 681
Query 893 CAAGACCGATATTCCATTGCATTCTTTC-T-GCAACCGAGTCACGACTGTATAGTAGAAT 950
|||||||||||||||||| ||||||| | | | ||||||||||||||||| |||||||||
Sbjct 682 CAAGACCGATATTCCATTCCATTCTT-CATAG-AACCGAGTCACGACTGTCTAGTAGAAT 739
Query 951 GTCTTCCTACCTGCCAGTCTGAAAACAACCCTCCCAAATATCCAGCTATCAAATGTTCAA 1010
|||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 740 GTCTACCTACCTGCCAGTCCGAAAACAACCTTCCCAAATATCCAGCTATCAAATGTTCAA 799
Query 1011 CGTACCTCACCCAACGTTACCAGGATTCACAAGTGGATTTGAGCATCTACAAA 1063
||| ||||||||||||||||||| | ||||| ||| |||||||||||||||||
Sbjct 800 CGTTCCTCACCCAACGTTACCAGCAATCACATGTGAATTTGAGCATCTACAAA 852
Score = 178 bits (96), Expect = 1e-43
Identities = 136/154 (88%), Gaps = 8/154 (5%)
Strand=Plus/Plus
Query 278 AGCAAGAAGTTCTTTGCTCTTCCTTTGGACGAGAAAATGAAAGTCTTGAAAAATGAAAAG 337
||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 109 AGCAAGAAGTTCTTTGCTCTTCCTTTGGAGGAGAAAATGAAAGTCTTGAGAAATGAAAAG 168
Query 338 CATCAAGGCTATTCACCCGTCCTT-AGTCAAATCT-----C-TGATAACCAAATCCATGG 390
|||| ||||||||||||||||||| | |||||| | | ||| || ||| || | ||
Sbjct 169 CATCGAGGCTATTCACCCGTCCTTGA-TCAAATTTTAGATCCTGAGAATCAAGTCGACGG 227
Query 391 GGATTACAAAGAAAGTTTTTTCATTGGAATCGAA 424
|||||||||||||||||||||||||||||||||
Sbjct 228 TGATTACAAAGAAAGTTTTTTCATTGGAATCGAA 261
Score = 119 bits (64), Expect = 7e-26
Identities = 94/108 (87%), Gaps = 4/108 (4%)
Strand=Plus/Plus
Query 1 GGAAAACAAAACTCAAGAGGAAGCTTCGACCATCAATGTTTCATCTCTTACTTGCATAGA 60
||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 3 GGAGAACAAAACTCAAGAGGAAGCTTCGACCATCAAAGTTTCATCCCTTACTTGCATAGA 62
Query 61 TCTCGCCAACACC-AATCTT-CATCAATCAGCTGATGCGCTTAAGCAG 106
||| |||||| || || ||| || |||||||| | | | ||||| |||
Sbjct 63 TCTTGCCAAC-CCGAA-CTTTCAACAATCAGCGGTTTCTCTTAAACAG 108
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58885239285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5