BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485023
Length=1381
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-1713021... 2187 0.0
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837 ... 1371 0.0
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313 ... 798 0.0
> AT3G46520.1 | Symbols: ACT12 | actin-12 | chr3:17128263-17130210
FORWARD LENGTH=1453
Length=1453
Score = 2187 bits (1184), Expect = 0.0
Identities = 1317/1382 (95%), Gaps = 6/1382 (0%)
Strand=Plus/Plus
Query 1 CTAGAGATTGAAAAATGGCGGACGGTGAAGATATTCAGCCGCTCGTATGCGATAACGGTA 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 77 CTAGAGATTGAAAAATGGCGGACGGTGAAGATATTCAGCCGCTCGTTTGCGATAACGGGA 136
Query 61 CTGGAATGGTCAAGGCCGGTTTTGCAGGTGATGATGCTCCAAGAGCTGTATTCCCAAGTA 120
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 137 CTGGAATGGTCAAGGCTGGTTTTGCAGGTGATGATGCTCCTAGAGCTGTATTCCCAAGTA 196
Query 121 TCGTTGGGCGTCCGCGTCACACGGGAGTAATGGTTGGAATGGGACAAAAGGATGCATATG 180
||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 197 TCGTTGGCCGTCCACGTCACACGGGAGTGATGGTTGGAATGGGACAAAAGGATGCATACG 256
Query 181 TTGGAGACGAAGCACAGTCGAAACGTGGTATCTTGACTCTCAAGTATCCAATTGAACATG 240
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 257 TCGGAGACGAGGCACAGTCGAAACGTGGTATCTTGACTCTCAAGTATCCAATTGAGCATG 316
Query 241 GTATTGTTAACAATTGGGATGATATGGAGAAGATCTGGCATCACACTTTCTACAACGAGC 300
||||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 317 GTATTGTCAACAACTGGGATGATATGGAGAAGATTTGGCATCACACTTTCTACAATGAGC 376
Query 301 TGCGAGTCGCCCCGGAAGAACATCCGGTTCTGCTAACCGAAGCGCCGCTCAATCCAAAGG 360
|||| || ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||
Sbjct 377 TGCGTGTTGCCCCGGAAGAGCATCCGGTTTTGCTAACCGAAGCGCCGCTTAATCCGAAGG 436
Query 361 CTAACCGTGAGAAGATGACACAGATCATGTTTGAAACATTTAACACTCCTGCTATGTATG 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 437 CTAACCGTGAGAAGATGACACAGATCATGTTTGAAACATTCAACACTCCTGCTATGTATG 496
Query 421 TTGCCATTCAAGCTGTTCTCTCCCTCTATGCCAGTGGCCGTACTACTGGTATTGTTTTGG 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 497 TTGCCATTCAAGCTGTTCTCTCCCTCTATGCTAGTGGCCGTACTACTGGTATTGTTTTGG 556
Query 481 ACTCTGGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 ACTCTGGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACG 616
Query 541 CAATCCTGCGTCTTGATCTTGCGGGTCGTGATCTAACCGACCACCTGATGAAAATCCTGA 600
|||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||
Sbjct 617 CAATCCTGCGTCTTGATCTTGCAGGTCGTGACCTAACCGACCACCTCATGAAAATCCTGA 676
Query 601 CAGAGCGTGGTTACTCTTTCACCACAACTGCTGAGCGTGAAATTGTTAGAGACATGAAGG 660
|||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 677 CAGAGCGTGGTTACTCATTCACCACAACTGCTGAGCGTGAGATTGTCAGAGACATGAAGG 736
Query 661 AGAAGCTCTCTTACATTGCCTTGGACTACGAGCAAGAGCTTGAGACTTCCAAAACAAGCT 720
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 737 AGAAGCTCTCGTACATTGCCTTGGACTATGAGCAAGAGCTTGAGACTTCCAAAACCAGCT 796
Query 721 CATCTGTCGAGAAGAGCTTCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGC 780
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 CATCTGTGGAGAAGAGCTTCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGC 856
Query 781 GTTTCCGGTGCCCTGAAGTTCTGTTCCAGCCATCGATGATCGGAATGGAAAATCCGGGAA 840
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 857 GTTTCCGGTGTCCTGAAGTTCTGTTCCAGCCATCCATGATCGGAATGGAAAATCCGGGAA 916
Query 841 TCCATGAAACTACTTACAATTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTTT 900
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 917 TTCATGAAACTACTTACAACTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTTT 976
Query 901 ATGGAAACATTGTGCTTAGTGGTGGAACCACAATGTTCGGCGGGATTGGTGACAGGATGA 960
||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct 977 ATGGAAACATTGTGCTTAGTGGTGGCACCACAATGTTTGGCGGGATTGGTGATAGGATGA 1036
Query 961 GTAAAGAGATCACCGCGTTGGCTCCAAGCAGTATGAAGATCAAAGTGGTGGCTCCACCGG 1020
||||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 1037 GTAAAGAAATCACCGCGTTGGCGCCGAGCAGTATGAAGATCAAAGTGGTTGCTCCACCGG 1096
Query 1021 AAAGGAAGTACAGTGTTTGGATTGGTGGCTCTATCTTGGCCTCCCTCAGTACTTTCCAGC 1080
|||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||
Sbjct 1097 AAAGGAAGTACAGTGTTTGGATCGGTGGCTCTATCTTGGCTTCTCTCAGTACTTTCCAGC 1156
Query 1081 AGATGTGGATTGCGAAAGCCGAGTATGATGAATCTGGACCGTCGATCGTCCACAGGAAGT 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 AGATGTGGATTGCGAAAGCCGAGTATGATGAATCTGGACCGTCGATCGTCCACAGGAAGT 1216
Query 1141 GCTTCTAATCAAATA-TCACCAAGTAAAACAAGTGCGGTAAAAATTTTGAGATCAGTTTT 1199
|||||| |||||| | ||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 1217 GCTTCTGATCAAA-AGTCACCAAGTAAAACAAGAGCGGTAAAAATTTTGATATCAGTTTT 1275
Query 1200 TCACCCTGAAGCCAGTTGCTATAATTACTTACAACTCCTATATTTGTGTTCTTTTATTCT 1259
|||||||||||||| |||||||||||||| |||||| || ||||||||||||||||||||
Sbjct 1276 TCACCCTGAAGCCATTTGCTATAATTACTCACAACTTCTCTATTTGTGTTCTTTTATTCT 1335
Query 1260 TCTCCCTCATTGTTCATTTTAATCTCTCTTTTGCAACAAAACAAGTTaaaaaaaaaCACA 1319
| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||
Sbjct 1336 TGTCCCTCATTGTTCATTTTAATCTCTCTTTTGCAACAAAGCAACTTAAAAAAA--CA-- 1391
Query 1320 GATCAGTCATTAACAGAATGTTATTATTATATGTATACATATTCGTATACACACATTATC 1379
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1392 GATCAGTCATTAACAGAATGTTATTATTATATGTATACATATTAGTATACACCCATTATC 1451
Query 1380 TT 1381
||
Sbjct 1452 TT 1453
> AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837
FORWARD LENGTH=1544
Length=1544
Score = 1371 bits (742), Expect = 0.0
Identities = 1016/1151 (88%), Gaps = 8/1151 (1%)
Strand=Plus/Plus
Query 5 AGATTGAAAAATGGCGGACGGTGAAGATATTCAGCCGCTCGTATGCGATAACGGTACTGG 64
|||||||| |||||||||||||||||| ||||| ||||| || || || || || |||||
Sbjct 150 AGATTGAAGAATGGCGGACGGTGAAGACATTCAACCGCTTGTTTGTGACAATGGAACTGG 209
Query 65 AATGGTCAAGGCCGGTTTTGCAGGTGATGATGCTCCAAGAGCTGTATTCCCAAGTATCGT 124
|||||| |||||||| || || ||||| ||||| |||||||| || || || || || ||
Sbjct 210 AATGGTTAAGGCCGGATTCGCGGGTGACGATGCACCAAGAGCGGTTTTTCCGAGCATTGT 269
Query 125 TGGGCGTCCGCGTCACACGGGAGTAATGGTTGGAATGGGACAAAAGGATGCATATGTTGG 184
|| ||||| || |||||||| || ||||| || ||||||||||||||||| ||||||||
Sbjct 270 AGGCCGTCCTCGCCACACGGGTGTGATGGTAGGGATGGGACAAAAGGATGCTTATGTTGG 329
Query 185 AGACGAAGCACAGTCGAAACGTGGTATCTTGACTCTCAAGTATCCAATTGAACATGGTAT 244
|||||| || || || |||||||||||||||||||| ||||| |||||||| ||||| ||
Sbjct 330 AGACGAGGCTCAATCAAAACGTGGTATCTTGACTCTGAAGTACCCAATTGAGCATGGAAT 389
Query 245 TGTTAACAATTGGGATGATATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCTGCG 304
|||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 390 TGTTAATAATTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCG 449
Query 305 AGTCGCCCCGGAAGAACATCCGGTTCTGC-TAACCGAAGCGCCGCTCAATCC-AAAGGCT 362
|| ||||| ||||||||||||||||| | | |||||||| || |||||||| ||| |||
Sbjct 450 TGTTGCCCCTGAAGAACATCCGGTTCT-CTTGACCGAAGCTCCTCTCAATCCGAAA-GCT 507
Query 363 AACCGTGAGAAGATGACACAGATCATGTTTGAAACATTTAACACTCCTGCTATGTATGTT 422
||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||||
Sbjct 508 AACCGTGAGAAGATGACTCAGATCATGTTTGAGACATTCAATACTCCTGCTATGTATGTT 567
Query 423 GCCATTCAAGCTGTTCTCTCCCTCTATGCCAGTGGCCGTACTACTGGTATTGTTTTGGAC 482
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 568 GCCATTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGAC 627
Query 483 TCTGGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTATGCACTTCCACACGCA 542
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct 628 TCTGGAGATGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTCCCACACGCA 687
Query 543 ATCCTGCGTCTTGATCTTGCGGGTCGTGATCTAACCGACCACCTGATGAAAATCCTGACA 602
||||| |||||||| || || |||||||| || || |||||||| ||||||||||| |||
Sbjct 688 ATCCTACGTCTTGACCTAGCAGGTCGTGACCTCACGGACCACCTCATGAAAATCCTCACA 747
Query 603 GAGCGTGGTTACTCTTTCACCACAACTGCTGAGCGTGAAATTGTTAGAGACATGAAGGAG 662
|||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 748 GAGCGTGGATACTCCTTCACCACAACTGCTGAACGTGAAATTGTTAGAGACATGAAAGAG 807
Query 663 AAGCTCTCTTACATTGC-CTTGGACTACGAGCAAGAGCTTGAGACTTCCAAAACAAGCTC 721
||||||||||||||||| || | ||| |||||||||||| ||||||||||||||||||||
Sbjct 808 AAGCTCTCTTACATTGCTCTAG-ACTTCGAGCAAGAGCTAGAGACTTCCAAAACAAGCTC 866
Query 722 ATCTGTCGAGAAGAGCTTCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGCG 781
|| || ||||| ||||||||||| || || || |||||||||||||| || |||||| |
Sbjct 867 GTCCGTTGAGAAAAGCTTCGAGCTTCCTGATGGACAAGTGATAACCATTGGAGCAGAGAG 926
Query 782 TTTCCGGTGCCCTGAAGTTCTGTTCCAGCCATCGATGATCGGAATGGAAAATCCGGGAAT 841
|||||||| || ||||||||||||||||| || |||||||||||||||||||| |||||
Sbjct 927 GTTCCGGTGTCCGGAAGTTCTGTTCCAGCCGTCAATGATCGGAATGGAAAATCCAGGAAT 986
Query 842 CCATGAAACTACTTACAATTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTT-T 900
||||||||| || || || || ||||||||||||||||||||||| ||||| || ||| |
Sbjct 987 CCATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAGA-CTTGT 1045
Query 901 ATGGAAACATTGTGCTTAGTGGTGGAACCACAATGTTCGGCGGGATTGGTGACAGGATGA 960
|||| ||||||||||| |||||||||||||||||||| || ||||||||||| || ||||
Sbjct 1046 ATGGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGA 1105
Query 961 GTAAAGAGATCACCGCGTTGGCTCCAAGCAGTATGAAGATCAAAGTGGTGGCTCCACCGG 1020
| |||||||| || || ||||||||||| ||||||||||| || || |||||||||||||
Sbjct 1106 GCAAAGAGATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGG 1165
Query 1021 AAAGGAAGTACAGTGTTTGGATTGGTGGCTCTATCTTGGCCTCCCTCAGTACTTTCCAGC 1080
| |||||||||||||| ||||| ||||||||||| ||||| || ||||| ||||||||||
Sbjct 1166 AGAGGAAGTACAGTGTATGGATCGGTGGCTCTATATTGGCTTCACTCAGCACTTTCCAGC 1225
Query 1081 AGATGTGGATTGCGAAAGCCGAGTATGATGAATCTGGACCGTCGATCGTCCACAGGAAGT 1140
||||||||||||||||||| ||||| |||||||||||||| || || || || ||||| |
Sbjct 1226 AGATGTGGATTGCGAAAGCAGAGTACGATGAATCTGGACCCTCAATAGTGCATAGGAAAT 1285
Query 1141 GCTTCTAATCA 1151
|||||||||||
Sbjct 1286 GCTTCTAATCA 1296
> AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313
FORWARD LENGTH=1707
Length=1707
Score = 798 bits (432), Expect = 0.0
Identities = 919/1153 (80%), Gaps = 38/1153 (3%)
Strand=Plus/Plus
Query 15 ATGGCGGACGGTGAAGATATTCAGCCGCTCGTATGCGATAACGGTACTGGAATGGTCAAG 74
||||| || | ||| || ||||| || | || || || || |||||||||||||| |||
Sbjct 208 ATGGCCGATGCTGATGACATTCAACCTATTGTCTGTGACAATGGTACTGGAATGGTTAAG 267
Query 75 GCCGGTTTTGCAGGTGATGATGCTCCAAGAGCTGTATTCCCAAGTATCGTTGGGCGTCCG 134
|| || || || || ||||||||||| ||||| || ||||| ||| | ||||| || ||
Sbjct 268 GCTGGATTCGCTGGAGATGATGCTCCCAGAGCGGTTTTCCCCAGTGTTGTTGGTCGACCT 327
Query 135 CGTCA-CACGGGAGTAATGGTTGGAATGGGA-CA-AAAGGATGCATATGTTGGAGACGAA 191
| || || || || |||||||| || | | || ||| ||||| |||||||| || |||
Sbjct 328 AGACATCA-TGGTGTCATGGTTGGGAT-GAATCAGAAA-GATGCGTATGTTGGTGATGAA 384
Query 192 GCACAGTCGAAACGTGGTATCTTGAC-TCTCAAGTATCCAATTGAACATGGTATTGTTAA 250
||||| || ||| | |||||| | || | | || || || ||||| |||||| ||||||
Sbjct 385 GCACAATCCAAAAGAGGTATCCTCACAT-TGAAATACCCTATTGAGCATGGTGTTGTTAG 443
Query 251 CAATTGGGATGATATGGAGAAGATCTGGCATCACACTTTCTACAACGAGCTGCG-AGTCG 309
||| |||||||| ||||||||||| |||||||||||||||||||| ||||| || | | |
Sbjct 444 CAACTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTA-TTG 502
Query 310 CCCCGGAAGAACATCCGGTTCTGCTAACCGAAGCGCCGCTCAATCCAAAGGCTAACCGTG 369
| || ||||| || |||||||| || ||||| || || || || ||||| || ||| | |
Sbjct 503 CTCCTGAAGAGCACCCGGTTCTACTTACCGAGGCTCCTCTTAACCCAAAAGCCAACAGAG 562
Query 370 AGAAGATGACACAGATCATGTTTGAAACATTTAACACTCCTGCTATGTATGTTGCCATTC 429
|||||||||| |||||||||||||| || ||||| |||| |||||||||||||||||||
Sbjct 563 AGAAGATGACTCAGATCATGTTTGAGACCTTTAATTCTCCAGCTATGTATGTTGCCATTC 622
Query 430 AAGCTGTTCTCTCCCTCTATGCCAGTGGCCGTACTACTGGTATTGTTTTGGACTCTGGAG 489
|||||||||| || || || |||||||| ||||| || |||||||| ||||||||||| |
Sbjct 623 AAGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACCGGTATTGTGTTGGACTCTGGTG 682
Query 490 ATGGTGTGAGC-CACACGGTACCAATCTACGAGGGTTA-TGCACTTCCACACGCAATCCT 547
|||||||| | ||||| || || ||||||||||||| | |||||||||| || |||||
Sbjct 683 ATGGTGTGT-CTCACACTGTGCCTATCTACGAGGGTTTCT-CACTTCCACATGCTATCCT 740
Query 548 GCGTCTTGATCTTGCGGGTCGTGATCTAACCGACCACCTGATGAAAATCCTGACAGAGCG 607
||||| || ||||| |||||||| || || || |||| ||||| ||||| || ||| |
Sbjct 741 CCGTCTCGACCTTGCTGGTCGTGACCTTACTGATTACCTCATGAAGATCCTTACCGAGAG 800
Query 608 TGGTTAC-TCTTTCACCACAACTGCTGAGCGTGAAATTGTTAGAGACATGAAGGAGAAGC 666
|||||| | || ||||||||| || || || |||||||| |||||||| ||||||||||
Sbjct 801 AGGTTACATGTT-CACCACAACAGCAGAACGGGAAATTGTGAGAGACATCAAGGAGAAGC 859
Query 667 TCTC-TTACATTGCCT-TGGACTACGAGCAAGAGCTTGAGACTTCCAAAACAAGCTCATC 724
| || || | || | | ||||||||||||||| | ||||| || ||||| ||||| ||
Sbjct 860 TTTCCTTTG-TCGC-TGTCGACTACGAGCAAGAGATGGAGACCTCGAAAACCAGCTCCTC 917
Query 725 TGTCGAGAAGAGCT-TCGAGCTGCCAGACGGTCAAGTGATAACCATCGGGGCAGAGCGTT 783
|||| |||| || | || | || ||||| |||||||| || ||||| || ||| | |
Sbjct 918 CATCGAAAAGAACTAT-GAATTACCCGACGGACAAGTGATCACGATCGGTGCTGAGAGAT 976
Query 784 TCCGGTGCCCTGAAGTTCTGTTCCAGCCATCGAT--GATCGGAATGGAAAATCC-GGGAA 840
|| ||||||| ||||| || ||||||||||| || | | ||||||||| | | ||||
Sbjct 977 TCAGGTGCCCAGAAGTCCTTTTCCAGCCATC-ATTTGTT-GGAATGGAAGCTGCAGGGA- 1033
Query 841 TCCATGAAACTACTTACAATTCAATCATGAAATGTGATGTGGATATCAGGAAGGATCTTT 900
|||| || || |||||||| || |||||||| |||||||| |||||||||||||| ||||
Sbjct 1034 TCCACGAGACAACTTACAACTCGATCATGAAGTGTGATGTTGATATCAGGAAGGACCTTT 1093
Query 901 ATGGAAACATTGTGCTTAGTGGTGGAACCACAATGTTCGGCGGG-ATTGGTGACAGGATG 959
| || ||||||||||| |||||||| || || |||||| | || |||| ||| | |||
Sbjct 1094 ACGGTAACATTGTGCTCAGTGGTGGTACAACTATGTTCT-CAGGTATTGCAGACCGTATG 1152
Query 960 AGTAAAGAGATCACCGCG-TTGGCTCCAAGCAGTATGAAGATCAAAGTGGTGGCTCCACC 1018
|| ||||||||||| || ||| | || ||||| |||||||| || || ||||| |||||
Sbjct 1153 AGCAAAGAGATCACAGCTCTTGCC-CCGAGCAGCATGAAGATTAAGGTCGTGGCACCACC 1211
Query 1019 GGAAAGGAAGTACAGTGTTTGGATTGGTGGCTCTATC-TTGGCCTCCCTCAGTACTTTCC 1077
|| |||||||||||||| ||||||||||| |||||| ||| | |||||||| |||||||
Sbjct 1212 CGAGAGGAAGTACAGTGTCTGGATTGGTGGTTCTATCCTTG-CTTCCCTCAGCACTTTCC 1270
Query 1078 AGCAGATGTGGAT-TGCGAAAGCCGAGTATGATGAATCTGGACC-GTCGATCGTCCACAG 1135
||||||||||||| | | || || |||||||||||| | || || | | || ||||||||
Sbjct 1271 AGCAGATGTGGATCT-CTAAGGCAGAGTATGATGAAGCAGGTCCAGGC-ATTGTCCACAG 1328
Query 1136 GAAGTGCTTCTAA 1148
|| |||||||||
Sbjct 1329 AAAATGCTTCTAA 1341
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68021738475
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5