BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485075 Length=1882 Score E Sequences producing significant alignments: (Bits) Value AT3G46980.3 | Symbols: PHT4;3 | phosphate transporter 4;3 | chr... 2647 0.0 > AT3G46980.3 | Symbols: PHT4;3 | phosphate transporter 4;3 | chr3:17307055-17309938 REVERSE LENGTH=1883 Length=1883 Score = 2647 bits (1433), Expect = 0.0 Identities = 1734/1875 (92%), Gaps = 38/1875 (2%) Strand=Plus/Plus Query 1 ACCGGAATAATCGTAAGCAGCTCCGATTGGTGAAAATGTGTTGCTCTCTCTCTATACAAT 60 |||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| Sbjct 5 ACCGGAGTAATCGTAAGCAGCTTCGACTGGTGAAAATGTGTTACTCTCTCTCTATACAAT 64 Query 61 CTTCAATAGACTTCCGTAATCGAAGCTCCCTAAAAATCCATGGAGATCGAGCAATCTTGG 120 ||||||| ||||||| |||||||| | | |||||||||||||||||||||||||| || | Sbjct 65 CTTCAATTGACTTCCATAATCGAAACGCTCTAAAAATCCATGGAGATCGAGCAAT-TTTG 123 Query 121 A-TTCGAACTTACCTTCACTGAGGTGGATTCCGTCTTTGCCGGAGCGAGATCGCCGGAGA 179 | ||||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||||| Sbjct 124 ACTTCGAACTTACCTACACTCAGGAGGATTCCGTTTTTGCCGGAGCGAGATCGCCGGAGA 183 Query 180 AAGTTGTTACTCTGCT-CCGGGAGAAG-CGTAGGA-TCGTTGAGATTCACCAGAAATACT 236 |||||| | ||||| | ||||||| || |||| | || |||| ||||||| |||| ||| Sbjct 184 AAGTTGGTCCTCTG-TACCGGGAG-AGTCGTA-AACTCATTGAAATTCACCGGAAACACT 240 Query 237 GCCGTCCATTTATGTGGTATTCCGCGTCATCGATTAAGAGTGTCTTGCAGCGATGCTCGC 296 ||||| || ||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 241 TCCGTCGATCTATGTGGTATTCCTCGTCATCGATTAAGAGTTTCTTGCAGCGATGCTCGC 300 Query 297 CGTTCGCCGGAAGAGACGGCGGCGGAGATGACGGCGCAACCTAATTTTTCGGAATTTATA 356 ||| | |||||||| |||||||||||| ||||||||||||| |||||||| ||||||||| Sbjct 301 CGTACACCGGAAGAAACGGCGGCGGAGTTGACGGCGCAACCCAATTTTTCAGAATTTATA 360 Query 357 ACGTCGGAGAGAGTGAAAGTGGTCGCGATGCTTGCGCTTGCTCTGGCGCTGTGCAATGCG 416 |||||||||||||| |||||||| |||||||| ||||||||| ||||||| ||||||||| Sbjct 361 ACGTCGGAGAGAGTCAAAGTGGTTGCGATGCTCGCGCTTGCTTTGGCGCTATGCAATGCG 420 Query 417 GATCGTGTTGTGATGTCCGTCGCGATTGTTCCTCTTTCGCTTTCTCGTGGATGGAGCAAG 476 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 421 GATCGTGTTGTGATGTCCGTTGCGATTGTTCCTCTTTCGCTTTCTCGTGGATGGAGCAAA 480 Query 477 TCATTTTCCGGTATCGTTCAGTCATCGTTTCTGTGGGGATACTTAATTTCACCAATAGCT 536 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct 481 TCATTTTCCGGTATCGTTCAGTCATCGTTTCTATGGGGATACTTAATTTCTCCAATTGCT 540 Query 537 GGTGGAACTTTGGTGGACCGTTATGGCGGTAAAGTAGTCATGGCGTGGGGTGTGGCTCTG 596 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 541 GGTGGAACTTTGGTGGACCGTTATGGTGGTAAAGTAGTCATGGCGTGGGGTGTGGCTTTG 600 Query 597 TGGTCGTTGGCTACTTTCCTTACCCCTTGGGCTGCTGATAGTTCTTTGTGGGCACTTCTT 656 ||||||||||| ||||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct 601 TGGTCGTTGGCAACTTTTCTTACCCCTTGGGCGGCTGATAGTTCTTTGTGGGCTCTTCTT 660 Query 657 GCTGCAAGAGCTATGGTTGGAGTTGCTGAAGGAGTAGCTCTTCCTTGCATGAACAACATG 716 ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct 661 GCTGCAAGAGCGATGGTTGGGGTTGCTGAAGGAGTGGCTCTTCCTTGTATGAACAACATG 720 Query 717 GTTGCGAGATGGTTTCCCTCAACAGAACGTTCAAGGGCGGTTGGTATCGCTATGGCGGGG 776 |||||||||||||||||| ||||||||||||| |||||||||||||| || ||||| ||| Sbjct 721 GTTGCGAGATGGTTTCCCCCAACAGAACGTTCTAGGGCGGTTGGTATTGCAATGGCAGGG 780 Query 777 TTTCAGCTTGGGAATGTTGTAGGACTCATGTTGTCTCCTATTCTTATGTCTCAAGGTGGT 836 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 781 TTTCAGCTTGGGAATGTTGTAGGACTCATGTTGTCTCCTATTCTTATGTCTCAAGGAGGT 840 Query 837 ATATATGGCCCATTTGTAATATTTGGGCTATCGGGGTTCCTTTGGTTGCTCGTGTGGCTC 896 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 841 ATATATGGCCCATTTGTAATTTTTGGACTATCGGGGTTCCTTTGGTTGCTCGTGTGGCTC 900 Query 897 TCTGCGACATCAAGTGCACCAGATCGACATCCTCAGATTACAAAGTCTGAACTTGAGTAT 956 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TCTGCAACGTCAAGTGCACCAGATCGACATCCTCAGATTACAAAGTCTGAACTTGAGTAT 960 Query 957 ATAAAGCAAAAGCAGCAACCATCTACTGGGGAGAACAAACGAAACACCACAGGTGGAATA 1016 |||||||||||| ||||| ||||||| |||||||||||||| | |||| |||||||| Sbjct 961 ATAAAGCAAAAGAAGCAAATATCTACTATGGAGAACAAACGAATTAGCACAAGTGGAATA 1020 Query 1017 CCTCCTTTTGGACGCCTTCTCTCCAAGATGCCGACTTGGGCTGTTATAGTTGCAAATTCC 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 CCTCCTTTTGGACGCCTTCTCTCCAAGATGCCGACTTGGGCTGTTATAGTTGCAAATTCC 1080 Query 1077 ATGCATAGCTGGGGTTTCTTTGTGATTCTTTCATGGATGCCCATATACTTCAATTCAGTA 1136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 ATGCATAGCTGGGGTTTCTTTGTGATTCTTTCATGGATGCCCATATACTTCAATTCAGTA 1140 Query 1137 TATCATGTGAACCTCAAACAAGCTGCTTGGTTTAGTGCCGTTCCATGGAGTATGATGGCT 1196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 TATCATGTGAACCTCAAACAAGCTGCTTGGTTTAGTGCCGTTCCATGGAGTATGATGGCT 1200 Query 1197 TTCACAGGATACATTGCTGGTTTTTGGTCGGATTTGTTGATACGGCGTGGTACAAGCATC 1256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1201 TTCACAGGATACATTGCTGGTTTTTGGTCGGATTTGTTGATACGGCGTGGTACAAGCATC 1260 Query 1257 ACCTTAACGCGAAAAATCATGCAGTCCATTGGTTTCATTGGTCCTGGAATTTCTCTCATT 1316 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1261 ACCTTAACGCGAAAAATCATGCAGTCCATTGGTTTCATTGGTCCTGGAATTGCTCTCATT 1320 Query 1317 GGTCTAACGACAGCGAAACAACCTTTAGTAGCATCAGCCTGGCTTAGTTTAGCCGTTGGG 1376 ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1321 GGTCTAACGACGGCAAAACAACCTTTAGTGGCATCAGCCTGGCTTAGTTTAGCCGTTGGG 1380 Query 1377 CTTAAATCATTCAGCCATTTGGGGTTTCTTATTAATCTTCAGGAAATTGCTCCAGAGTAT 1436 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 1381 CTTAAATCATTCAGCCATTTGGGGTTTCTTATTAATCTTCAGGAAATTGCTCCCGAATAT 1440 Query 1437 TCGGGTGTTCTACATGGAATGTGTCTTACTGCTGGGACTTTGGCTGCGATAGTTGGCACA 1496 || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1441 TCCGGTGTTCTACATGGAATGTGTCTTACTGCTGGGACATTAGCTGCGATAGTTGGCACA 1500 Query 1497 GTTGGAACTGGTTTCTTTGTAGAACTATTGGGCTCCTTCCAAGGATTCATCCTTCTTACA 1556 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1501 GTTGGAGCTGGTTTCTTTGTAGAACTATTGGGCTCCTTCCAGGGATTCATCCTTCTTACA 1560 Query 1557 GCAATTTTGTATCTTCTTTCTGCTCTCTTTTACAACATATATGCAACTGGAGAAAGAGTC 1616 ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1561 GCAATATTGTATCTCCTTTCTGCTCTCTTTTACAACATATACGCAACTGGAGAAAGAGTA 1620 Query 1617 GATTTTGACACTACAGC---TTGAAGGAGACCACAAAGTCGGTTAATAGGTGGATCAGCT 1673 ||||||||||| ||||| ||||||| |||||||||||| |||||||||||||||||| Sbjct 1621 GATTTTGACACAACAGCAGCTTGAAGGTGACCACAAAGTCACTTAATAGGTGGATCAGCT 1680 Query 1674 AGTAGAGAAGTTGCAACTCTAAATAGAATCAGCTTTTGCTCTCCAAGTAAATATCAGAAA 1733 |||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| || Sbjct 1681 AGTAAAGAAGTTGCAACTCTATATAGAATCAGCTTTTGCTCTCCAAGTAAATACCAGGAA 1740 Query 1734 CAAGATATATCTCGACTTTGTACAGAAACTAG--T--CT-C--CT---TG---------- 1773 ||||| |||| ||||||||||||||||| | || | || || Sbjct 1741 CAAGAC----CTCGGCTTTGTACAGAAACTAGAATTTCTTCGTCTCGATGGTTCTCTCCT 1796 Query 1774 --ATAAATAA-TGAAAAAATGTACCAAGTTTTCTATGTTCAGTGTCATGAAACGCCTTTG 1830 |||||||| |||||||||||| |||||| |||||||||| |||| |||| |||||| | Sbjct 1797 TGATAAATAAATGAAAAAATGTAGCAAGTTATCTATGTTCAATGTCGTGAATCGCCTTAG 1856 Query 1831 AGAAGATAATGGAAA 1845 ||||||||||| ||| Sbjct 1857 AGAAGATAATGAAAA 1871 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93172211520 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5