BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485083
Length=2775
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332985-... 4490 0.0
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23769811-... 2287 0.0
> AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332985-17336966
FORWARD LENGTH=2776
Length=2776
Score = 4490 bits (2431), Expect = 0.0
Identities = 2669/2782 (96%), Gaps = 23/2782 (1%)
Strand=Plus/Plus
Query 1 AGGGTTTCGAAAAT-ATGACTACTACATTCGAATTTGTGCAACCAAGAATCCACGGATTT 59
||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1 AGGGTTTCG-AAATAATGACTACTACATTCGAATTTCTGCAACCAAGAATCCACGGATTT 59
Query 60 GCAACTCGTTGTTGTAGTAATAGTCTATTGTACTCGAAAGGTTCGAGCTTTTTCAACGAT 119
|||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 60 GCAACTTGTTGTAGTAGTAATAGTCTATTGTACTCGAAAGCTTCGAGATTTTTCAACGAT 119
Query 120 CGTTGTAGGGTTTATCGCCAAAACCCGAATCGGTTTGTCTCCAATTCAATCACGCTTCCT 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 120 CGTTGTAGGGTTTATCGCCAAAATCCGAATCGGTTTGTCTCCAATTCAATCACGCTTCCT 179
Query 180 CTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGATGGG 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGATGGG 239
Query 240 TTTTCAAGAAAGAAGAGTAGATTAGTTGTGAATTGTCAAGAAGATGATCAGAAAGAGAGT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 240 TTTTCAAGAAAGAAGAGTAGATTAGTTGTGAATTGTCAAGAAGATGATCAGAACGAGAGT 299
Query 300 TCGAGTGAAGAGGAAGAAAGCAGTCAGAGTACTCCGGCGAAGTCGGAGAGGAAAAGAGAG 359
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TCTAGTGAGGAGGAAGAAAGCAGTCAGAGTACTCCGGCGAAGTCGGAGAGGAAAAGAGAG 359
Query 360 AAGCAAAGGGAAGATAAGGTATGGTGGTCAAAGGGGAAGAAATGGCAGTGGCAACCAATA 419
||| ||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct 360 AAG-AAA--GAAGATAAGGTGTGGTGGTCAAAGGGCAAGAAATGGCAGTGGCAGCCAATA 416
Query 420 ATCCAAGCTCAGGGGATTGGAGTTTTGTTGTTGCAATTGGGTGTTGTTATGTTTGTGATG 479
|||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 417 ATCCAAGCGCAAGGGATTGGAGTTTTGTTGTTGCAATTGAGTGTTGTTATGTTTGTGATG 476
Query 480 CGGTTGCTTCGACCTGGAATACCTTTACCTGGATCGGAGCCGCGAGTTCAGACGACTTTT 539
|| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 477 CGATTGCTTCGACCTGGTATACCTTTACCTGGATCGGAGCCTCGAATTCAGACGACTTTT 536
Query 540 GTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGTAACCAGGTGCAGAAAGTG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGTAACCAGGTGCAGAAAGTG 596
Query 600 GAGGTTGATGGGGTTCAAGTTTTGTTTAAGTTAAGAGATGATGGAAAGTGGCAAGAGAGT 659
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 597 GAGGTTGATGGGGTTCAAGTTTTGTTTAAGTTAAGAGATGATGGGAAGTGGCAAGAGAGT 656
Query 660 GAAACTAGTAGGTTGTCTGAGTCGTCTGAATCGCTGTTAAGAGCTGTGGCTCCGACGAAA 719
|||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||
Sbjct 657 GAAACTAGTAGGTTGTCTCAGTCGTCTGAATCGTTGTTAAGAACTGTGGCTCCTACGAAA 716
Query 720 AGGGTTGTTTATTCCACCACAAGGCCGGGTGATATTAAAACACCGTATGAGAAGATGCTT 779
|||||||| |||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct 717 AGGGTTGTGTATTCCACTACTAGGCCGGGTGATATCAAAACACCGTATGAGAAGATGCTT 776
Query 780 GGGAATAATGTGGAATTTGGATCGCCTGAGAAGCGTTCTGGTGGCTTCTTCAACTCTGGA 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 777 GGGAATAATGTGGAATTTGGATCGCCTGAGAAGCGTTCTGGTGGCTTCTTCAACTCTGCA 836
Query 840 TTGATAGCTCTTTTCTACATAGCGGTGCTTGCTGGGCTTATTCGATTCCCTCTTAGCTTC 899
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 837 TTGATAGCTCTTTTCTACATAGCGGTACTTGCTGGGCTTATTCGATTCCCTGTTAGCTTC 896
Query 900 TCCACGAGTACAACCGGCCAACTTAGGACTCGAAAATCTGGTGGTCCTGATGGGGGAAAA 959
||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 897 TCCACGAGTTCAACCGGCCAGCTTAGGACCCGAAAGGCTGGTGGTCCTGATGGGGGAAAA 956
Query 960 GTCTCTGGTGGAGGTGAAACAATCACTTTTGCAGATGTTGCAGGTGTTGATGAAGCAAAG 1019
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 957 GTCTCTGGTGGAGGTGAAACAATCACTTTTGCGGATGTTGCAGGTGTTGATGAAGCAAAG 1016
Query 1020 GAAGAGCTAGAAGAAATCGTGGAATTTCTTAGGAATCCTGACAAGTATGTCCGTCTAGGT 1079
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1017 GAAGAGCTAGAAGAAATCGTGGAATTTCTTAGGAATCCTGAAAAGTATGTCCGTCTAGGT 1076
Query 1080 GCACGTCCTCCGCGTGGTGTCCTATTGGTTGGTCTTCCTGGAACAGGGAAAACCCTTCTT 1139
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1077 GCACGTCCTCCGCGTGGTGTCCTATTGGTTGGTCTTCCCGGAACAGGGAAAACCCTTCTT 1136
Query 1140 GCAAAGGCTGTTGCTGGGGAAGCTGAAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 GCAAAGGCTGTTGCTGGGGAAGCTGAAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTT 1196
Query 1200 GTAGAGCTGTATGTCGGTATGGGTGCCTCACGTGTAAGGGATCTTTTTGCACGTGCCAAG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1197 GTAGAGCTGTATGTCGGTATGGGTGCCTCACGTGTAAGGGATCTTTTTGCACGGGCCAAG 1256
Query 1260 AAGGAAGCTCCATCGATTATATTTATTGATGAGATAGATGCTGTGGCAAAAAGCCGTGAT 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 AAGGAAGCTCCATCGATTATATTTATTGATGAGATAGATGCTGTGGCAAAAAGCCGTGAT 1316
Query 1320 GGTAAATTCCGTATCGGCAGCAATGATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACT 1379
||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1317 GGTAAATTCCGAATGGGGAGCAACGATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACT 1376
Query 1380 GAGATGGATGGTTTTGACAGCAACTCTGCGGTGATCGTTCTTGGAGCTACAAATCGTGCT 1439
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1377 GAGATGGATGGTTTTGACAGCAATTCTGCGGTTATCGTTCTTGGAGCTACAAATCGTGCC 1436
Query 1440 GATGTCTTAGACCCGGCCCTGCGTCGTCCTGGGAGATTCGATCGTGTTGTTACGGTGGAA 1499
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1437 GATGTCTTAGATCCGGCCCTGCGTCGTCCTGGGAGATTTGATCGTGTTGTTACGGTGGAA 1496
Query 1500 ACGCCAGACAAAGTTGGAAGAGAATCCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTT 1559
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 ACGCCAGACAAAATTGGAAGAGAATCCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTT 1556
Query 1560 CCTTTGGGAGATGATGTTAACCTTGGTTGTATTGCCTCAATGACAACTGGTTTTACGGGG 1619
||||||||||||||||| ||||| ||| |||||||||||||||| |||||||| ||||||
Sbjct 1557 CCTTTGGGAGATGATGTCAACCTCGGTAGTATTGCCTCAATGACCACTGGTTTCACGGGG 1616
Query 1620 GCAGACCTTGCAAACTTGGTAAACGAGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACG 1679
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1617 GCAGATCTTGCAAACTTGGTAAATGAGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACG 1676
Query 1680 -ACTGTTGAAAAAATTGACTTCATTCAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAA 1738
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 AAC-GTTGAGAAAATTGACTTCATTCAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAA 1735
Query 1739 GAAATCTGCAAGATTAAAAGGCAACGAGAAGGCAGTGGTGGCAAGGCATGAAGCTGGGCA 1798
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1736 GAAATCTGCAAGATTAAAAGGCAATGAGAAGGCAGTGGTCGCAAGGCATGAAGCTGGGCA 1795
Query 1799 TGCAGTGGTTGGTACCGCTGTTGCAAATCTTCTTACTGGACAGCCACGTGTTGAGAAATT 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 TGCAGTGGTTGGTACCGCTGTTGCAAATCTTCTTACTGGACAGCCACGTGTTGAGAAATT 1855
Query 1859 AAGCATATTGCCAAGATCAGGAGGGGCATTGGGATTTACATACATTCCTCCTACCAGTGA 1918
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1856 AAGCATATTGCCAAGAACAGGAGGGGCATTGGGATTTACATACATTCCTCCTACTAGTGA 1915
Query 1919 AGACAGATATTTGCTCTTCATTGATGAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGG 1978
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 AGACAGATATTTACTCTTCATTGATGAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGG 1975
Query 1979 TCGTGCAGCTGAAGAAGTTGTTTACTCAGGGCGTATATCAACAGGTGCATTTGACGATAT 2038
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1976 TCGTGCAGCTGAAGAAGTTGTTTACTCAGGGCGTATATCAACAGGTGCATTTGATGATAT 2035
Query 2039 AAGGCGGGCTACTGATATGGCATACAAGGCAGTAGCAGAATATGGTCTTAACCAAAAAAT 2098
||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 2036 AAGGCGGGCAACTGATATGGCATACAAGGCAGTAGCTGAATACGGTCTTAACCAAAAAAT 2095
Query 2099 CGGACCTGTGTCTGTGGCTACACTTTCTGGTGGTGGGATTGACGACTCTGGAGGCTCTCC 2158
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 2096 CGGACCTGTGTCTGTGGCTACACTTTCTGGTGGTGGGATTGACGATTCTGGAGGCTCGCC 2155
Query 2159 ATGGGGAAGAGATCAGGGGAAACTAGTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTT 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2156 ATGGGGAAGAGATCAGGGGAAACTAGTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTT 2215
Query 2219 ACAATCTGCTCTCGATGTTGCGCTGTCTGTTGTACGCGCTAATCCAGATGTATTGGAAGG 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2216 ACAATCTGCTCTCGATGTTGCGCTGTCTGTTGTACGCGCTAATCCAGATGTATTGGAAGG 2275
Query 2279 GCTTGGTGCTCAACTTGAAGAGAAAGAGAAAGTAGAAGGTGAAGAACTTCAGATGTGGTT 2338
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 2276 GCTTGGTGCTCAACTTGAAGAGAAAGAGAAAGTAGAAGGTGAAGAACTGCAGAAGTGGTT 2335
Query 2339 AAGTATGGTGGTTGCACCTGAAGAACTCGCAGTCTTTGTCAAAGGAAAGCAAGAGCTTTT 2398
||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 2336 AAGCATGGTGGTTGCACCAGAAGAACTCGCAGTCTTTGTCGAAGGAAAGCAAGAGCTTTT 2395
Query 2399 GCTCCCGGCACAAGCTAGCTCCAGTTAACAGA-TACTCTGTTCTATCAT-ATATTATAGC 2456
|||||| ||||||||||||||||||||||| | |||||||||||||||| | ||||||||
Sbjct 2396 GCTCCCAGCACAAGCTAGCTCCAGTTAACA-ACTACTCTGTTCTATCATCA-ATTATAGC 2453
Query 2457 CATAAAGACAGTATCTAACACGGATCATCAGATCTTTCCTCGCTGCCTTCTGTATCTCCA 2516
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 2454 TATAAAGACAGTATCTAACACGGATCATCAGCTCTTTCCTTGCTGCCTTCTGTATCTCCA 2513
Query 2517 GGTCAGATCTGGTTATCACCATTGCCCTTTAGCATCCATGGTTCCAGCATGCATAGAACA 2576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514 GGTCAGATCTGGTTATCACCATTGCCCTTTAGCATCCATGGTTCCAGCATGCATAGAACA 2573
Query 2577 CTTGAATCAAAACTTGAAGAACCATTTTGGAATATGAAACT-GGTGATATCTCATAGATT 2635
||||||||||| ||||||||||||| |||| |||||| | ||||||| ||||||||||
Sbjct 2574 CTTGAATCAAA-CTTGAAGAACCATATTGGGATATGACTTTTGGTGATAACTCATAGATT 2632
Query 2636 TTGCTGGATGTGTGTTGTAAGATTTGGTATTCTTGCTAGATACAGTCTCTTAAAGAGAAC 2695
||| ||||||||| || |||||||||||||||||||||||||||||||||| || |
Sbjct 2633 TTGGTGGATGTGT-TT-TAAGATTTGGTATTCTTGCTAGATACAGTCTCTTTAA-----C 2685
Query 2696 TTGGCAAAA--GTGTATAAGTGATTCAGATGTATAAAAAAGCCAGACTTATATGTGTAAA 2753
||||||||| |||||||| ||||||| ||||||||||| |||||||| |||||||||||
Sbjct 2686 TTGGCAAAAAAGTGTATAATTGATTCATATGTATAAAAA-GCCAGACTGATATGTGTAAA 2744
Query 2754 GATCTTAAAGACCCCTACAAAA 2775
||||||||||||||| ||||||
Sbjct 2745 GATCTTAAAGACCCCCACAAAA 2766
> AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23769811-23773780
REVERSE LENGTH=2751
Length=2751
Score = 2287 bits (1238), Expect = 0.0
Identities = 2046/2423 (84%), Gaps = 107/2423 (4%)
Strand=Plus/Plus
Query 61 CAACTCGTTGTTGTAGTAATAGTCTATTGTACTCGAAAGGTTCGAGCTTTTT-C-A-A-C 116
||||| ||||| ||| || |||| ||||||| | | | | |||||||||||| | | | |
Sbjct 114 CAACTTGTTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCGAGCTTTTTCCGAGATC 173
Query 117 GATCGTTGTAGGGTTTATCGCCAAAACCCGAATCGGTTTGTCTCCAATTCAATCACGCTT 176
|||| || | ||||| ||| || || |||||||| || ||||||||||| || || ||
Sbjct 174 GATC-TT-T-TGGTTT-TCGTCAGAATCCGAATCGATTCGTCTCCAATTC-AT--CGATT 226
Query 177 CCTCTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGAT 236
| || | || | |||| ||| || || ||| || |||||||||||||||||| |
Sbjct 227 CAACTTC--CTCAATC-AGTTCCAGGGTCGATAAACCAGGAAAGGTTTAATCTTTGGCAA 283
Query 237 GGGTTTTC----AAGAA-AG-A--AG-AGTAG-ATTA-G-TTGTGAATTGTCAAGAAGAT 284
|||||||| ||||| || | || ||||| | | | |||||||||||||||||| |
Sbjct 284 GGGTTTTCGAGGAAGAAGAGTACTAGTAGTAGTAGAACGATTGTGAATTGTCAAGAAGGT 343
Query 285 GATCAGAAAGAGAGTTCGAGTGAAGAGGAAGAAAGCAGTCAGAGTACTCCGGCGAAGTCG 344
|||||||||| || || |||| | ||| || ||| | | || | | | || |
Sbjct 344 GATCAGAAAGCTAGCTCAAGTG-A-AGG-AG-AAG--G--AAAG-A---C--C-AA-T-- 385
Query 345 GAGAGGA-AAA-GA-GAGAAGCAAAGGGAAG-ATAAGGTATGGTGGTC-AAAGGGGAAGA 399
| |||| ||| || | ||||| |||| ||| || || |||||||||| ||| |||||||
Sbjct 386 -A-AGGATAAAGGACG-GAAGC-AAGGTAAGAATGAGTTATGGTGGTCTAAA-GGGAAGA 440
Query 400 AATGGCAGTGGCAACCAATAATCCAAGCTCAGGGGATTGGAGTTTTGTTGTTGCAATTGG 459
||||||| ||| |||| ||||| ||||| |||| |||||| || |||| | |||||||
Sbjct 441 AATGGCAATGGAAACCGATAATTCAAGCGCAGGAGATTGGTGTAATGTTACTACAATTGG 500
Query 460 GTGTTGTTATGTTTG-TGATGCGGTTGCTTCGACCTGGAATACCTTTACCTGGATCGGAG 518
|| |||||||||||| || |||| ||||| ||||| ||||| || ||||| || ||||||
Sbjct 501 GTATTGTTATGTTTGTTG-TGCGATTGCTCCGACCCGGAATCCCGTTACCGGGTTCGGAG 559
Query 519 CCGC-GAGTTCAGACGACTTTTGTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAA 577
|| | || |||||||| ||| ||||||||||||||||||| ||||| |||||||||||
Sbjct 560 CCTCGGA-CACAGACGACGTTTATGAGTGTACCGTATAGTGATTTCTTGAGTAAAGTTAA 618
Query 578 CAGTAACCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCAAGTTTTGTTTAAGTT-AAGAG 636
| | | |||| |||||||||||||| ||||| |||| |||||||||||||| || ||
Sbjct 619 TAATGATGAGGTTCAGAAAGTGGAGGTGGATGGTTTTCATGTTTTGTTTAAGTTGAA-AG 677
Query 637 ATGATGGAAAGTGGCAAGAGAGTGAAAC---TAGTAG--G--TT--G---TCTGAGTCGT 684
||||||| || | ||||||||||||||| |||||| | || | ||||||||||
Sbjct 678 ATGATGGGAATTTGCAAGAGAGTGAAACTAGTAGTAGTAGTATTAAGCTCTCTGAGTCGT 737
Query 685 CTGA-ATCGCTG-TTAAG-AGCTGTGGCTCCGACGAAAAGGGTTGTTTATTCCACCACAA 741
|||| | | || || || || |||||||||||| ||||| ||||| |||||||| || |
Sbjct 738 CTGAGA-CTATGCTT-AGAAG-TGTGGCTCCGACTAAAAGAGTTGTGTATTCCACTACTA 794
Query 742 GGCCG-GGTGATATTAAAACACCGTATGAGAAGATGCTTGGGAATAATGTGGAATTTGGA 800
||||| || ||||| ||||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct 795 GGCCGAGG-GATATCAAAACACCGTATGAGAAAATGCTTGAGAATAATGTGGAATTCGGG 853
Query 801 TCGCCTGAGAAGCGTTCTGGTGGCTTCTTCAACTCTGGATTGATAGCTCTTTTCTACATA 860
|||||||| ||||| ||||||||||| ||||||||||||||||||| ||| ||||||||
Sbjct 854 TCGCCTGATAAGCGCTCTGGTGGCTTTTTCAACTCTGGATTGATAGTTCTGTTCTACATT 913
Query 861 GCGGTGCTTGCTGGGCTTAT---TCGATTCCCTCTTAGCTTCT-CCACGAGTACAACCGG 916
|| |||||||| |||||| | ||||| ||| ||| ||| | ||| ||||||||| ||
Sbjct 914 GCAGTGCTTGCAGGGCTTCTCCACCGATTTCCTGTTAACTTTTCCCA-GAGTACAACGGG 972
Query 917 CCAACTTAGGACTCGAAAATCTGGTGGTCCTGATGGGGGAAAAGTCTCTGGTGGA-GGTG 975
|| || ||||| || || ||||||||||||| |||||||||||| |||||| || ||||
Sbjct 973 ACAGCTGAGGACCCGCAAGTCTGGTGGTCCTGGTGGGGGAAAAGTTTCTGGT-GATGGTG 1031
Query 976 AAACAATCACTTTTGCAGATGTTGCAGGTGTTGATGAAGCAAAGGAAGAGCTAGAAGAAA 1035
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |
Sbjct 1032 AAACAATCACTTTTGCAGATGTTGCTGGTGTTGATGAAGCAAAGGAAGAGCTGGAAGAGA 1091
Query 1036 TCGTGGAATTTCTTAGGAATCCTGACAAGTATGTCCGTCTAGGTGCACGTCCTCCGCGTG 1095
| ||||||||||| | ||||||||| | |||||| ||||||||||| |||||||| ||||
Sbjct 1092 TTGTGGAATTTCTCAAGAATCCTGATAGGTATGTTCGTCTAGGTGCTCGTCCTCCTCGTG 1151
Query 1096 GTGTCCTATTGGTTGGTCTTCCTGGAACAGGGAAAACCCTTCTTGCAAAGGCTGTTGCTG 1155
|||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1152 GTGTCCTACTGGTCGGTCTTCCTGGAACAGGGAAAACCCTTCTTGCAAAAGCTGTTGCTG 1211
Query 1156 GGGAAGCTGAAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTCG 1215
||||| |||| || || ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1212 GGGAATCTGATGTTCCATTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTTG 1271
Query 1216 GTATGGGTGCCTCACGTGTAAGGGATCTTTTTGCACGTGCCAAGAAGGAAGCTCCATCGA 1275
| |||||||||||||| ||||||||||| |||||||| ||||||||||| ||||| || |
Sbjct 1272 GCATGGGTGCCTCACGCGTAAGGGATCTATTTGCACGAGCCAAGAAGGAGGCTCCGTCAA 1331
Query 1276 TTATATTTATTGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGTAAATTCCGTATCG 1335
|||||||||| ||||||||||||||||| || ||||||||||||||||||||| | || |
Sbjct 1332 TTATATTTATAGATGAGATAGATGCTGTCGCGAAAAGCCGTGATGGTAAATTCAGAAT-G 1390
Query 1336 G-CAGCAATGATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACTGAGATGGATGGTTTT 1394
| |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 1391 GTCAGCAATGATGAAAGGGAGCAAACCTTGAATCAATTGCTCACTGAGATGGATGGTTTT 1450
Query 1395 GACAGCAACTCTGCGGTGATCGTTCTTGGAGCTACAAATCGTGCTGATGTCTTAGACCCG 1454
||||| | |||||| || || |||||||||||||| ||||| |||||||||||||||||
Sbjct 1451 GACAGTAGCTCTGCAGTTATTGTTCTTGGAGCTACCAATCGAGCTGATGTCTTAGACCCT 1510
Query 1455 GCCCTGCGTCGTCCTGGGAGATTCGATCGTGTTGTTACGGTGGAAACGCCAGACAAAGTT 1514
||||||||||| ||||||||||| ||||||||||||||||||||| | || |||||||||
Sbjct 1511 GCCCTGCGTCGGCCTGGGAGATTTGATCGTGTTGTTACGGTGGAATCACCTGACAAAGTT 1570
Query 1515 GGAAGAGAATCCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTTCCTTTGGGAGATGAT 1574
||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1571 GGAAGAGAATCCATTTTGAAAGTGCATGTTTCAAAGAAAGAGCTTCCTTTGGGAGATGAT 1630
Query 1575 GTTAACCTTGGTTGTATTGCCTCAATGACAACTGGTTTTACGGGGGCAGACCTTGCAAAC 1634
|| ||||| | | | ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1631 GTCAACCTAGCTAGCATTGCCTCAATGACAACCGGTTTTACTGGGGCAGACCTTGCAAAC 1690
Query 1635 TTGGTAAACGAGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACGACTGTTGAAAAAATT 1694
|||| || |||||||| |||||||| ||||| |||| ||||| ||||||||| || |||
Sbjct 1691 CTGGTTAATGAGGCTGCTTTGCTAGCGGGAAGGAAGAGCAAGATGACTGTTGATAAGATT 1750
Query 1695 GACTTCATTCAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAAGAAATCTGCAAGATTA 1754
||||||||||| ||||| |||||||| ||||||||||||||||||||| | || || |||
Sbjct 1751 GACTTCATTCATGCTGTCGAGCGATCTATAGCGGGCATAGAGAAGAAAACAGCTAGGTTA 1810
Query 1755 AAAGGCAACGAGAAGGCAGTGGTGGCAAGGCATGAAGCTGGGCATGCAGTGGTTGGTACC 1814
||||| | ||||| || ||||| ||||||||||||||||||||||| || ||||||||
Sbjct 1811 AAAGGTAGTGAGAAAGCTGTGGTTGCAAGGCATGAAGCTGGGCATGCTGTTGTTGGTACA 1870
Query 1815 GCTGTTGCAAATCTTCTTACTGGACAG-CCACGTGTTGAGAAATTAAGCATATTGCCAAG 1873
|||||||||| ||||||| |||||||| || ||||||||||||||||||||||| |||||
Sbjct 1871 GCTGTTGCAAGTCTTCTTTCTGGACAGTCC-CGTGTTGAGAAATTAAGCATATTACCAAG 1929
Query 1874 ATCAGGAGGGGCATTGGGATTTACATACATTCCTCCTAC-CAGTGAAGACAGATATTTGC 1932
|||||||||||||||||| |||||||||||||| || || || |||||||||||||||||
Sbjct 1930 ATCAGGAGGGGCATTGGGCTTTACATACATTCCCCCAACGCA-TGAAGACAGATATTTGC 1988
Query 1933 TCTTCATTGATGAGCTGCTTGGGCGTTTAGTTACCCTTCTTGGAGGTCGTGCAGCTGAAG 1992
|||| |||||||| || | ||| || || || || |||||||||||||||||||||||||
Sbjct 1989 TCTTTATTGATGAACTACATGGCCGCTTGGTAACTCTTCTTGGAGGTCGTGCAGCTGAAG 2048
Query 1993 AAGTTGTTTACTCAGGGCGTATATCAACAGGTGCATTTGACGATATAAGGCGGGCTACTG 2052
| ||||||||||| ||||||||||||||||||||| |||| ||||| ||| | || || |
Sbjct 2049 AGGTTGTTTACTCGGGGCGTATATCAACAGGTGCACTTGATGATATCAGGAGAGCAACCG 2108
Query 2053 ATATGGCATACAAGGCAGTAGCAGAATATGGTCTTAACCAAAAAATCGGACCTGTGTCTG 2112
| ||||| || ||||||||||| ||||||||||| ||| | ||||||||||| || ||||
Sbjct 2109 ACATGGCCTATAAGGCAGTAGCTGAATATGGTCTCAACGAGAAAATCGGACCCGTCTCTG 2168
Query 2113 TGGCTACACTTTCTGGTGGTGGGATTGACGACTCTGGAGGCTCTCCATGGGGAAGAGATC 2172
||||||| ||||||| |||||||||||| |||||||| || || ||||||||||||||||
Sbjct 2169 TGGCTACGCTTTCTGCTGGTGGGATTGATGACTCTGGGGGATCACCATGGGGAAGAGATC 2228
Query 2173 AGGGGAAACTAGTTGATCTTGTTCAAAAAGAAGTGACAATTTTGTTACAATCTGCTCTCG 2232
||||| | || ||||| |||||||||| ||| ||||||| |||||| ||||||||||| |
Sbjct 2229 AGGGGCATCTGGTTGACCTTGTTCAAAGAGAGGTGACAAATTTGTTGCAATCTGCTCTGG 2288
Query 2233 ATGTTGCGCTGTCTGTTGTACGCGCTAATCCAGATGTATTGGAAGGGCTTGGTGCTCAAC 2292
|||||||| || ||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 2289 ATGTTGCGTTGACTGTTGTTCGCGCTAATCCAGATGTATTAGAAGGGCTCGGTGCTCAAC 2348
Query 2293 TTGAAGA-GAAAGAGAAAGTAGAAGGTGAAGAACTT-CAGATGTGGTTAAGTATG-GTGG 2349
| ||||| ||| |||||||||||||||||||| || |||| ||||||| || | || |
Sbjct 2349 TGGAAGATGAA-GAGAAAGTAGAAGGTGAAGAG-TTGCAGAAATGGTTAAATA-GAGTAG 2405
Query 2350 TTGCACCTGA-AG-AACTCGCAGTCTTTGTCAAAGGAAAGCAAGA--GCTTTTGCTCCCG 2405
| | ||| | || |||| ||||| || |||||||||| ||| | ||||| || ||
Sbjct 2406 TA-C-CCTCAGAGGAACTTGCAGTGTTCATCAAAGGAAAACAA-ACTGCTTTA-CTTCCA 2461
Query 2406 GCACAAGCTAGCTCCAGTTAACA 2428
|||||||||||||||||||||||
Sbjct 2462 GCACAAGCTAGCTCCAGTTAACA 2484
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137858759364
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5