BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485118 Length=785 Score E Sequences producing significant alignments: (Bits) Value AT3G47540.2 | Symbols: | Chitinase family protein | chr3:17521... 952 0.0 AT2G43590.1 | Symbols: | Chitinase family protein | chr2:18081... 359 3e-98 AT2G43580.1 | Symbols: | Chitinase family protein | chr2:18078... 255 3e-67 > AT3G47540.2 | Symbols: | Chitinase family protein | chr3:17521029-17522624 FORWARD LENGTH=1024 Length=1024 Score = 952 bits (515), Expect = 0.0 Identities = 601/642 (94%), Gaps = 7/642 (1%) Strand=Plus/Plus Query 1 CACAAACAACAAAACATGGCTTTCACAAAAATTGT-CTCAGTCATTTTCCTTTGCCTCTT 59 ||||||||||| |||||||||| ||| |||||| | || |||| |||||||||||||| | Sbjct 1 CACAAACAACATAACATGGCTTCCACCAAAATT-TCCTTAGTCTTTTTCCTTTGCCTCGT 59 Query 60 AGGTCCTTGTATAGGTGTTGGAACCACTAGCTCTGGTGGATCAGTCAGTAGCATTGTGAC 119 ||||||||||||||| | ||||||||| ||| ||| | ||||||||||||||||||||| Sbjct 60 AGGTCCTTGTATAGGCGCTGGAACCACAAGCGCTGCCGAATCAGTCAGTAGCATTGTGAC 119 Query 120 ACAAGGTTTCTTTAACAACATTATCAACCAAGCCGGTAATGGCTGCACGAGAAAAAGATT 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 ACAAGGTTTCTTTAACAACATTATCAACCAAGCCGGTAATGGCTGCACGAGAAAAAGATT 179 Query 180 -ATACACCCGCGACTCTTTCATTGACGCTGCTAATAGTTTTCCCAACTTTGCTAGTTCCG 238 | ||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||| Sbjct 180 CA-ACACCCGCGACTCTTTCATTGACGCTGCTAATAATTTTCCAAACTTTGCAAGTTCCG 238 Query 239 TTACTAGACGTGAAATTGCTACCATGTTTGCTCATGTCACTCACGAGACCGGCCACTTCT 298 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct 239 TTACAAGACGTGAAATTGCAAGCATGTTTGCTCATGTCACTCACGAGACCGGACACTTCT 298 Query 299 GCTACATAGAAGAAACAAAGAAAAAGTCACGTGGCAGGTGCGACGAGAACGTAGAGCAAA 358 ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| | Sbjct 299 GCTACATAGAAGAAATAAAGAAAAGGTCACGTGGTAGGTGCGACGAGAACGTAGAGCAGA 358 Query 359 GACCATGTCCATCGCCGAGAAAAGGTCACTCCGGTCGTGGTCA---GAGCCTCGGTCTCG 415 ||||||||||||| | ||| ||||||||||||||||||||||| ||| |||||||||| Sbjct 359 GACCATGTCCATCACAGAGTAAAGGTCACTCCGGTCGTGGTCATCAGAGTCTCGGTCTCG 418 Query 416 ACCTTCTAAGCCAGCCTGAGCTTGTGGGTAGCAACCCAACTGTAGCTTTCACGAAGGGTT 475 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 419 ACCTTCTACGCCAGCCTGAGCTTGTGGGTAGCAACCCAACTGTAGCTTTCAGGAAGGGTT 478 Query 476 TGTCGTTTTGGATTAATAGCGTAAGGCCGGTACTGAACCAAGGATTTGGAGCCACTATAA 535 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 479 TGTCGTTTTGGATTAATAGCGTAAGGCCGGTGCTGAACCAAGGATTTGGAGCCACTATAA 538 Query 536 GAGCCATCAATGGGATGGAATGTAACGGTGGGAATTCAGGTGCTGTCAACGCAAGGATTG 595 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 539 GAGCCATCAATGGGATGGAATGTAACGGTGGGAATTCAGGTGCGGTCAAGGCAAGGATTG 598 Query 596 GGTACTATAGAGACTATTGTAGACAACTTGGTGTGGATCCTG 637 ||||||||||||||||||||||||| |||||||||||||||| Sbjct 599 GGTACTATAGAGACTATTGTAGACAGCTTGGTGTGGATCCTG 640 > AT2G43590.1 | Symbols: | Chitinase family protein | chr2:18081331-18082767 REVERSE LENGTH=1074 Length=1074 Score = 359 bits (194), Expect = 3e-98 Identities = 242/266 (91%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 395 GTGGTCAGAGCCTCGGTCTCGACCTTCTAAGCCAGCCTGAGCTTGTGGGTAGCAACCCAA 454 ||||||| || |||||||| ||||||||| ||||||| || ||||||||||||||||||| Sbjct 551 GTGGTCAAAGTCTCGGTCTTGACCTTCTACGCCAGCCCGAACTTGTGGGTAGCAACCCAA 610 Query 455 CTGTAGCTTTCACGAAGGGTTTGTCGTTTTGGATTAATAGCGTAAGGCCGGTACTGAACC 514 |||||||||||| || |||||||| ||||||||| ||||||||||||||||| ||||||| Sbjct 611 CTGTAGCTTTCAGGACGGGTTTGTGGTTTTGGATGAATAGCGTAAGGCCGGTTCTGAACC 670 Query 515 AAGGATTTGGAGCCACTATAAGAGCCATCAATGGGATGGAATGTAACGGTGGGAATTCAG 574 |||| ||||||||||| || ||||| || ||||| ||||||||||||||||| ||||| | Sbjct 671 AAGGGTTTGGAGCCACCATTAGAGCTATTAATGGAATGGAATGTAACGGTGGTAATTCCG 730 Query 575 GTGCTGTCAACGCAAGGATTGGGTACTATAGAGACTATTGTAGACAACTTGGTGTGGATC 634 |||| ||||||||||||||||| |||||||||||||||||| |||| ||||||||||| | Sbjct 731 GTGCAGTCAACGCAAGGATTGGATACTATAGAGACTATTGTGGACAGCTTGGTGTGGACC 790 Query 635 CTGGTCCTAACCTTAGTTGCTAAAAA 660 |||||||||||||||||||||||||| Sbjct 791 CTGGTCCTAACCTTAGTTGCTAAAAA 816 Score = 285 bits (154), Expect = 4e-76 Identities = 221/253 (87%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 60 AGGTCCTTGTATAGGT-GTTGGAACCACTAGCTCTGGTGGATCAGTCAGTAGCATTGTGA 118 ||||||||||| |||| | ||||||| | | | | || || || ||| |||||||||||| Sbjct 180 AGGTCCTTGTAGAGGTAG-TGGAACCCCGA-C-C-GGAGGGTCGGTCGGTAGCATTGTGA 235 Query 119 CACAAGGTTTCTTTAACAACATTATCAACCAAGCCGGTAATGGCTGCACGAGAAAAAGAT 178 ||||||||||||||||||| |||||||||||||| |||||||| ||| || | ||||||| Sbjct 236 CACAAGGTTTCTTTAACAATATTATCAACCAAGCTGGTAATGGTTGCGCGGGGAAAAGAT 295 Query 179 TATACACCCGCGACTCTTTCATTGACGCTGCTAATAGTTTTCCCAACTTTGCTAGTTCCG 238 | |||||||| ||||||||| || |||| ||||||| ||| ||||||||||| | ||| | Sbjct 296 TCTACACCCGTGACTCTTTCGTTAACGCCGCTAATACTTTCCCCAACTTTGCCAATTCTG 355 Query 239 TTACTAGACGTGAAATTGCTACCATGTTTGCTCATGTCACTCACGAGACCGGCCACTTCT 298 |||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||| Sbjct 356 TTACCAGACGTGAAATTGCTACCATGTTTGCTCATTTCACTCACGAGACCGGACATTTCT 415 Query 299 GCTACATAGAAGA 311 ||||||||||||| Sbjct 416 GCTACATAGAAGA 428 > AT2G43580.1 | Symbols: | Chitinase family protein | chr2:18078649-18080028 REVERSE LENGTH=981 Length=981 Score = 255 bits (138), Expect = 3e-67 Identities = 203/235 (86%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 115 GTGACACAAGGTTTCTTTAACAACATTATCAACCAAGCCGGTAATGGCTGCACGAGAAAA 174 ||||||||| |||||||||||||||||||||||||||||||||||| ||| || ||||| Sbjct 232 GTGACACAAATTTTCTTTAACAACATTATCAACCAAGCCGGTAATGGATGCGCGGGAAAA 291 Query 175 AGATTATACACCCGCGACTCTTTCATTGACGCTGCTAATAGTTTTCCCAACTTTGCTAGT 234 || || |||||||| |||||||||||| |||| | |||| ||| |||| |||||||| | Sbjct 292 AGTTTTTACACCCGGGACTCTTTCATTAACGCCACCAATACTTTCCCCAGCTTTGCTAAT 351 Query 235 TCCGTTACTAGACGTGAAATTGCTACCATGTTTGCTCATGTCACTCACGAGACCGGCCAC 294 |||||||||||||||||||||||||||||||||||||| ||||| ||||||| || ||| Sbjct 352 ACCGTTACTAGACGTGAAATTGCTACCATGTTTGCTCATTTCACTTACGAGACAGGACAC 411 Query 295 TTCTGCTACATAGAAGAAACAAA-GAAAAAGTCACGTGGCAGGTGCGACGAGAAC 348 ||||||||||||||||| | ||| | |||||||| || ||||||| ||||| Sbjct 412 TTCTGCTACATAGAAGAGATAAACGGGGC-GTCACGTGTCATGTGCGACCAGAAC 465 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38177951720 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5