BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485135
Length=3133
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47730.1 | Symbols: ATATH1, ATH1, ABCA2 | ATP-binding casset... 4477 0.0
AT5G61690.1 | Symbols: ATATH15, ATH15 | ABC2 homolog 15 | chr5:... 998 0.0
AT5G61730.1 | Symbols: ATATH11, ATH11 | ABC2 homolog 11 | chr5:... 920 0.0
> AT3G47730.1 | Symbols: ATATH1, ATH1, ABCA2 | ATP-binding cassette
A2 | chr3:17594060-17598896 REVERSE LENGTH=3302
Length=3302
Score = 4477 bits (2424), Expect = 0.0
Identities = 2781/2951 (94%), Gaps = 34/2951 (1%)
Strand=Plus/Plus
Query 1 GGCCATGACATTGCAGAGAGGTTTGCCTCTTCTCTTGCAACAGTACACGGCGTTGTTCAA 60
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 65 GGCCATGACGTTGCAGAGAGGTTTACCTCTTCTCTTGCAACAGTACACGGCGTTGTTCAA 124
Query 61 GAAAAACCTTCTT-CTTTCATGGCGAAGCAAACGAGCCACGTTTCTTCAGCTCTTCGCTT 119
|||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 125 GAAAAACCTT-TTGCTTTCATGGCGGAGCAAACGAGCCACGTTTCTTCAGCTCTTCGCTT 183
Query 120 CTTTCTTCTTCATCCTCCTCATCTTCTGTATCCAAGAAGCTATGGAGAAGAGCTTT-GCG 178
|||||||||||||||| ||||||||||||||||||| ||| ||||||||||| ||| ||
Sbjct 184 CTTTCTTCTTCATCCTTCTCATCTTCTGTATCCAAGCAGCCATGGAGAAGAG-TTTCGCT 242
Query 179 TCTTCCACGGCGCTCAAAACTGTTACGGATCCGACGGCGTTGATTTCGCCGCCGATTCCG 238
|| |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 243 TCCTCCACGGCTCTCAAAACTGTTACGGATCCGACGGCGCTGATATCGCCGCCGATTCCG 302
Query 239 CCTTGTGAAGATAAGTTCTTCGTGAATCTTCCGTGCTATGACTTTGTTTGGAGCGGAAAT 298
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 303 CCTTGTGAAGATAAATTCTTCGTGAATCTTCCTTGCTATGACTTTGTTTGGAGCGGTAAT 362
Query 299 CGTAGCCCCAAGGTGACTCAGATTGTTAATGCGATTATGAAGAATAATCCTGGCAGACCA 358
|||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct 363 CGTAGCTCCAAGGTCACGCAGATTGTTAATGCGATTATGAAGAATAATCCTGGAAGAAGT 422
Query 359 ATTCCTACCGAGAAGGTACGATCATTCGTGGATCCTGAAGCGGTAGATACGTGGCTTATG 418
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 ATTCCTATTGAGAAGGTACGATCATTCGTGGATCCTGAAGCGGTAGATACGTGGCTTATG 482
Query 419 GCGAACCCGTTGCTAGTTCCAGGAGCTTTGCACTTTGTGGAAAGAAATGCTACAGTAATT 478
||||| || ||| ||||||||||||||||||||||| | ||||||||||||||||| ||
Sbjct 483 GCGAATCCTTTGTTAGTTCCAGGAGCTTTGCACTTTATTGAAAGAAATGCTACAGTGATA 542
Query 479 AGTTATGGTATTCAAACTAATTCAACACCAGAGATGAATAGAGGAAGATTTGAAGATCCC 538
|||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 543 AGTTATGGTATTCAAACTAACTCAACTCCAGAGATGAATAGAGGAAGGTTTGAAGATCCT 602
Query 539 ACTTTCAAGTTTCAGATACCGCTTCAAATTGCGGCTGAGCGTGAAATCGCGAGGTCTTTA 598
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 603 ACTTTTAAGTTTCAGATACCTCTTCAAATTGCGGCTGAGCGTGAAATCGCGAGGTCGTTG 662
Query 599 ATAGGAGATCCAAACTTTAACTGGGTTGTTGGGTTTAAGGAGTTTCCGCACCCAACTATC 658
||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 663 ATAGGAGATCCGAACTTTAATTGGGTTGTTGGGTTTAAGGAGTTTCCTCACCCAACTATT 722
Query 659 GAAGCTATTGTTGCGTTGGACACTATAGGACCGACTTTTTTCCTTGCTGTTGCGATGTTT 718
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 723 GAAGCTATTGTTGCGTTGGACACTATAGGACCGACTTTTTTCCTTGCGGTTGCTATGTTT 782
Query 719 GGTTTTGTTCTTCAGATTAGTTCTCTGATCACTGAGAAAGAGCTCAAACTTCGCCAGGCA 778
|||||||| ||||||||||||||| |||| |||||||||||||| |||||||||||||||
Sbjct 783 GGTTTTGTACTTCAGATTAGTTCTTTGATTACTGAGAAAGAGCTTAAACTTCGCCAGGCA 842
Query 779 ATGACGATGATGGGTGTTTTTGACACTGCTTATTGGTTGTCATGGCTTACCTGGGAAGGA 838
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 843 ATGACGATGATGGGTGTTTTTGACACTGCTTATTGGTTGTCATGGCTTACTTGGGAAGGA 902
Query 839 ATTCTTACTGCCATATCAGCGCTTTTGACAGTTCTCTTTGGAATGATGTTCCAGTTCGAC 898
|||||||||||||| || ||||| |||| ||||| ||||||||||||||||||||||||
Sbjct 903 ATTCTTACTGCCATCTCGGCGCTCCTGACGGTTCTGTTTGGAATGATGTTCCAGTTCGAC 962
Query 899 TTTTTCTTGAAGAACAGTTTCCCTGTTGTCTTCCTACTTTTCATGCTTTTCCAGTTTAAT 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTTTTCTTGAAGAACAGTTTCCCTGTTGTCTTCCTACTTTTCATGCTTTTCCAGTTTAAT 1022
Query 959 CTGATTGGACTAGCATTCATGTTATCAGCTTTTATCAGCAAATCATCGTCAGCAACAACT 1018
|||||||||||||||||||| |||||||||||||||| |||||| | ||||||||||||
Sbjct 1023 TTGATTGGACTAGCATTCATGCTATCAGCTTTTATCAGTAAATCAACTTCAGCAACAACT 1082
Query 1019 GTCGGCTTCTTTGTGTTTCTGGTTGGCTTTGTAACACAGCTTGCAACATCAACTGGGTTT 1078
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1083 GTCGGTTTCTTTGTGTTTCTGGTTGGCTTTGTAACACAGCTTGCAACATCAAGTGGGTTT 1142
Query 1079 CCCTATGCCAAGAAGTATTCTCGCATGATCAGGTCGCTTTGGTCACTGTTCCCACCCAAT 1138
||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||
Sbjct 1143 CCCTATGCCAAGAAGTATTCTCGTATGATCAGGGCACTTTGGTCACTGTTCCCACCCAAT 1202
Query 1139 ACCTTTTCTCAGGGTCTAAAGCTGCTTGCTGATGCAACTTCAACTCCTCAAGATCCTGGT 1198
||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1203 ACCTTTTCTCAGGGTTTAAAGTTGCTCGCTGATGCAACTTCAACTCCTCAAGATCCTGGT 1262
Query 1199 ATTAGTTGGAGTAAGAGAGCAGAATGCGGACCCAACGAGGACACTGATTGTGTGATTACA 1258
|||||||||||||| |||||||||||||| || ||||| ||||||| ||||||| |||||
Sbjct 1263 ATTAGTTGGAGTAAAAGAGCAGAATGCGGTCCTAACGACGACACTGGTTGTGTGCTTACA 1322
Query 1259 ATTAATGATATCTACTTGTGGCTTCTTGGGACATTCTTTTTGTGGTTTGTTTTGGCTCTT 1318
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1323 ATTAATGATATCTACTTGTGGCTTCTTGGGACTTTCTTTTTGTGGTTTGTTTTGGCTCTT 1382
Query 1319 TACTTCGACAATATTACTCCAAATGCGTCTGGTGTAAGGAAATCTATCTTTTACTTTCTA 1378
||||| |||||||| ||||||||||| ||||| ||||| ||||||||||| |||||||||
Sbjct 1383 TACTTTGACAATATAACTCCAAATGCTTCTGGAGTAAGAAAATCTATCTTCTACTTTCTA 1442
Query 1379 AAACCTGGTTACTGGACCGGTAAAGGTGGCAACCGAGTAGAAGAAGGTGGAATTTGTAGT 1438
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1443 AAACCTGGGTACTGGACCGGCAAAGGTGGCAACCGAGTAGAAGAAGGTGGAATTTGTAGT 1502
Query 1439 TGTACTGGTTCAGTCCCACCTGTGGATCACGTTACCCCAGATGACGAAGATGTCCTTGAA 1498
|||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1503 TGTATTGGTTCAGTTCCACCTGTGGATCACATTACCCCAGATGACGAAGATGTCCTTGAA 1562
Query 1499 GAGGAAACTTTAGTTAAACAACATTCAATGGATGGTTTAGTTGATCCCAACATTGCAGTT 1558
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 1563 GAGGAAACTTTAGTTAAACAACATTCAATGGAGGGTTTAGTTGATCCCAACGTTGCAGTT 1622
Query 1559 CAAATACGTGGTCTTGCAAAGACTTATCCTGGGACGACGAATTTTGGATGCTGCAAATGC 1618
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1623 CAAATACGTGGTCTTGCAAAGACTTATCCTGGGACGACGAAGTTTGGATGCTGCAAATGC 1682
Query 1619 AAGAAAACTCCCCCTTTTCATGCTCTGAAGGGGTTGTGGATGAATATTGCCAAAGATCAG 1678
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1683 AAGAAAACTTCCCCTTTTCATGCTCTGAAGGGTTTGTGGATGAATATTGCCAAAGATCAA 1742
Query 1679 TTATTCTGTCTTCTTGGACCCAATGGCGCAGGAAAAACAACTACTATCAATTGTTTGACA 1738
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1743 TTATTCTGTCTTCTTGGACCCAATGGTGCAGGGAAAACAACTACTATCAATTGTTTGACA 1802
Query 1739 GGCTTATTTCCAGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCT 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1803 GGCTTATTTCCAGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCT 1862
Query 1799 GTTGGTATGTCCAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGG 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1863 GTTGGTATGTCCAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGG 1922
Query 1859 GATGCTTTGTCTGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCT 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923 GATGCTTTGTCTGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCT 1982
Query 1919 TCATCGATCAACTCGATGGTTGAGAAGTCACTAGCGGAGGTAAAACTGACAGAAGCAGGG 1978
||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1983 TCATCAATCAACTCGATGGTTGAGAAGTCACTGGCGGAGGTAAAACTAACAGAAGCAGGG 2042
Query 1979 AAAATCAGGGCAGGAAGTTACAGTGGAGGAATGAAGCGCCGACTCAGTGTTGCAGTTTCA 2038
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 2043 AAAATCAGGGCAGGAAGTTACAGTGGAGGAATGAAACGGCGACTCAGTGTTGCAGTTTCT 2102
Query 2039 CTCATTGGTGATCCAAAGCTGGTCTTCCTGGACGAACCGACTACAGGCATGGATCCGATC 2098
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 2103 CTCATTGGTGATCCAAAGCTGGTCTTCCTGGACGAACCTACTACAGGCATGGACCCGATC 2162
Query 2099 ACCAGGAGGCATGTGTGGGATATTATACAGGAAACCAAGAAAGGCCGTGCCATTATACTA 2158
|| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 2163 ACGAGGAGACATGTGTGGGATATCATACAGGAAACCAAGAAAGGTCGTGCCATTATACTA 2222
Query 2159 ACGACACATTCGATGGAGGAAGCTGATATATTAAGTGATCGGATAGGGATAATGGCTAAG 2218
|| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2223 ACAACACATTCGATGGAAGAAGCTGATATCTTAAGTGATCGGATAGGGATAATGGCTAAG 2282
Query 2219 GGTAGGCTCCGCTGCATTGGAACCTCGATCAGATTGAAATCCCGCTTTGGCACAGGTTTT 2278
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2283 GGTAGGCTCCGCTGCATTGGAACCTCGATCAGGTTGAAATCCCGCTTTGGCACAGGTTTC 2342
Query 2279 ATTGCTAACATCAGCTTTGTTGAAAGCAACAACCAAGAAAACAATGGCAATAACCACAAT 2338
||||||||||| ||||||||||||||||||||||| ||||||| | | | |
Sbjct 2343 ATTGCTAACATTAGCTTTGTTGAAAGCAACAACCA------CAATGGCGA-AGC-----T 2390
Query 2339 GGGGAAAATGGTGCTGTCGATTCACGCGAGCCAGTGAAGAAATTCTTTAAAGATCATCTC 2398
|| | | | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2391 GG------T--T-C-G--GATTCACGCGAGCCAGTGAAGAAATTCTTTAAAGATCATCTC 2438
Query 2399 AAAGTCAAACCAATAGAAGAAAACAAGGCCTTCATGACTTTTGTTATACCACACGACAAA 2458
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2439 AAAGTCAAACCAATAGAAGAAAACAAGGCCTTCATGACTTTTGTTATACCTCACGACAAA 2498
Query 2459 GAGAATCTTTTGACAGGCTTTTTCGCTGAGCTTCAAGACAGAGAAGAAGAATTTGGAATC 2518
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2499 GAGAATCTTTTGACAAGCTTTTTCGCTGAGCTTCAAGACAGAGAAGAAGAATTTGGAATC 2558
Query 2519 TCAGATATCCAACTTGGTCTCGCAACTCTTGAAGAAGTCTTTTTGAACATAGCAAGAAAA 2578
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 2559 TCAGATATCCAACTTGGTCTTGCTACTCTTGAAGAAGTCTTTTTGAACATAGCAAGAAAA 2618
Query 2579 GCTGAACTCGAAAGCGCTGCGGTTGATGGAACAATGGTCACTCTCGATCT-AACATCTGG 2637
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 2619 GCTGAACTCGAAAGCGCTGCGGTTGATGGAACAATGGTCACTCTCGA-CTTAACATCTGG 2677
Query 2638 TTCCTCAGTTGAGATACCGGTGGGGGCAAGATTTATTGGGATACCGGGAACAGAATCTGC 2697
||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||| ||||
Sbjct 2678 TTCTTCAGTCGAGATACCGGTAGGGGCAAGATTTATCGGGATACCGGGAACAGAAACTGC 2737
Query 2698 AGAGAATCCACGAGGAATCATGGTGGAAGTGTATTGGCAACAAGACGAGTCAGGTTCATT 2757
|||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||
Sbjct 2738 AGAGAATCCACGAGGAGTCATGGTGGAGGTGTATTGGCAACAAGACGAGTCAGGATCATT 2797
Query 2758 GTGCATCTCAGGACACTCCACGGAGATGCCAGTTCCTGAAAATATTCCCATGACAGATCC 2817
||||||||||||||||||||| ||||||||| |||||||||| |||||| ||||||||||
Sbjct 2798 GTGCATCTCAGGACACTCCACAGAGATGCCAATTCCTGAAAACATTCCCGTGACAGATCC 2857
Query 2818 GGTGGCACCAAGACATGGCGGAGTAAACTTGTTGGGAAGGAGAGGACGAAGACAAGTTCA 2877
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2858 GGTGGCACCAGGACATGGCGGAGTAAACTTGTTGGGACGGAGAGGACGAAGACAAGTTCA 2917
Query 2878 GGGGATTGTGATTGACCCTGAGTTTGCTAGCTTTGT--TAGAAGCGGTTCCACATCTTCC 2935
||| ||||||||||| ||||||||||||| |||| | ||||||||||||||| ||||||
Sbjct 2918 GGGAATTGTGATTGATCCTGAGTTTGCTA-CTTT-TACTAGAAGCGGTTCCACTTCTTCC 2975
Query 2936 CGACGCTTTTC 2946
||||| |||||
Sbjct 2976 CGACGTTTTTC 2986
Score = 244 bits (132), Expect = 3e-63
Identities = 185/209 (89%), Gaps = 9/209 (4%)
Strand=Plus/Plus
Query 2930 TCTTCCCGACGCTTTTCATTGTGAAATGAAATATAATGCGCCCGCGCAGACACA-A-ACA 2987
||||||||||| ||||||| ||||| ||||||||||| || || |||| ||||| | ||
Sbjct 2997 TCTTCCCGACGTTTTTCATCGTGAATTGAAATATAATCCG-CC-CGCATACACATACACT 3054
Query 2988 CACTGTTCTTAACTT-ACTGGACTAAGCTCTACAGGTTTTTCTGATTCGTTGTTGTAGTT 3046
||| ||||||||||| || ||| | |||||||||||||||||| |||||||||||||||
Sbjct 3055 CACAGTTCTTAACTTAAC-GGATTGCGCTCTACAGGTTTTTCTGGTTCGTTGTTGTAGTT 3113
Query 3047 TTATACGAA-AAAATCACAGGAGTGTTTATTT-AAATTTGTGTTTTACGTAATTATGATG 3104
|||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||
Sbjct 3114 TTATACGAGGAAAATCACAGGCGTGTTTATTTGAAATT-GTGTTTTACGTAATTATGATG 3172
Query 3105 TAAATTAGAAGGAAGTTTGTGATTAAAAA 3133
||||||||| ||||||||||||||||||
Sbjct 3173 TAAATTAGACTGAAGTTTGTGATTAAAAA 3201
> AT5G61690.1 | Symbols: ATATH15, ATH15 | ABC2 homolog 15 | chr5:24789495-24793487
REVERSE LENGTH=2760
Length=2760
Score = 998 bits (540), Expect = 0.0
Identities = 1078/1327 (81%), Gaps = 79/1327 (6%)
Strand=Plus/Plus
Query 1471 TACCCCAGATGACGAAGATGTCCTTGAAGAGGAAACTTTAGTTAAACAACATTCAATGGA 1530
||| ||| ||||| ||||||| |||||||| || || |||||||||||| |||||||
Sbjct 1401 TACGCCAAATGACAAAGATGTGCTTGAAGAAGAGACAGAAGTTAAACAACAAGCAATGGA 1460
Query 1531 TGGTTTAGTTGATCCCAACATTGCAGTTCAAATACGTGGTCTTGCAAAGACTTATCCTGG 1590
|| ||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 1461 CGGAATAGCTGATCCTAACATTGCAGTTCAAATACATGGTCTTGCAAAGACATATCCTGG 1520
Query 1591 GACGACGAATTTTGGATGCTGCAAATGCAAGAAAACTCCCCCTTTTCATGCTCTGAAGGG 1650
|| || || |||||||||||||||||| |||||| | |||||||||||| | |||||
Sbjct 1521 AACTACAAAGCTTGGATGCTGCAAATGCACCAAAACTTCGCCTTTTCATGCTGTAAAGGG 1580
Query 1651 GTTGTGGATGAATATTGCCAAAGATCAGTTATTCTGTCTTCTTGGACCCAATGGCGCAGG 1710
||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||
Sbjct 1581 TTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTCTTCTTGGACCTAATGGCGCGGG 1640
Query 1711 AAAAACAACTACTATCAATTGTTTGACAGGCTTATTTCCAGTTACTGGTGGTGATGCACT 1770
|||||||||||||| | ||||||||| ||| || ||||||||||||||||||||| ||
Sbjct 1641 GAAAACAACTACTATTAGTTGTTTGACTGGCATAAATCCAGTTACTGGTGGTGATGCTCT 1700
Query 1771 AATTTATGGAAATTCTATAAGAAGCTCTGTTGGTATGTCCAACATCCGTAAAATGATTGG 1830
|| |||||| | || |||||||| ||||| ||||| || ||||| || |||||||| ||
Sbjct 1701 TATATATGGAGACTCCATAAGAAGTTCTGTGGGTATATCTAACATTCGCAAAATGATAGG 1760
Query 1831 AGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTCTGGTGAAGAACACCTCAAACT 1890
||| |||||||||||||||||||||||||||||||||||| ||||| |||||||| | ||
Sbjct 1761 AGTATGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTCTAGTGAACAACACCTCCACCT 1820
Query 1891 CTTTGCTAGCATCAAAGGGTTGCCACCTTCATCGATCAACTCGA-TGGTTGAGAAGTCAC 1949
||||||||||||||||||||||||||| |||||||||| |||| || | ||||||| ||
Sbjct 1821 CTTTGCTAGCATCAAAGGGTTGCCACCAGCATCGATCAAATCGACTGCT-GAGAAGTTAC 1879
Query 1950 TAGCGGAGGTAAAACTGACAGAAGCAGG-GAAAATCAGGGCAGGAAGTTACAGTGGAGGA 2008
| ||||| ||||||||||||| ||| || |||| | || ||||||||||||||||| |||
Sbjct 1880 TGGCGGATGTAAAACTGACAGGAGC-GGCGAAAGTTAGAGCAGGAAGTTACAGTGGTGGA 1938
Query 2009 ATGAAGCGCCGACTCAGTGTTGCAGTTTCACTCATTGGTGATCCAAAGCTGGTCTTCCTG 2068
||||| || |||||||||||||| || |||| || || ||||| |||||| ||
Sbjct 1939 ATGAAACGTCGACTCAGTGTTGCGGTAGCACTTATCGGCGATCCCAAGCTGA-CT----- 1992
Query 2069 GACGAACCGACTACAGGCATGGATCCGATCACCAGGAGGCATGTGTGGGATATTATACAG 2128
|| | |||||||| || ||||| ||||| ||||||||||| ||||||||
Sbjct 1993 -AC--------T---GGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAA 2040
Query 2129 GAAACCAAGAAAGGCCGTGCCATTATACTAACGACACATTCGATGGAGGAAGCTGATATA 2188
|| | |||||||| |||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 2041 GAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCATTCTATGGAGGAAGCTGATATT 2100
Query 2189 TTAAGTGATCGGATAGGGATAATGGCTAAGGGTAGGCTCCGCTGCATTGGAACCTCGATC 2248
||||||||||| |||||||| |||||||| || ||||||||||||||||||||||| |||
Sbjct 2101 TTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGAACCTCAATC 2160
Query 2249 AGATTGAAATCCCGCTTTGGCACAGGTTTTATTGCTAACATCAGCTTTGTTGAAAGCAAC 2308
|| || ||||| ||||||||||| || ||| |||||| | | ||||| | |||| | |
Sbjct 2161 AGGTTAAAATCTCGCTTTGGCACGGGATTTGTTGCTACCGTTAGCTTCATCGAAA--A-C 2217
Query 2309 AACCAAGAAAACAATGGCAATAACCACAATGGG-GAAAATGGTGCTGTCGATTCACGCGA 2367
|| || | || ||||||| | | || | ||| ||| ||| |||| |
Sbjct 2218 AA--AA-A------TGACAATAAC-A---TCGGTGT---TGGAGCT-TCG---CACG--A 2255
Query 2368 GCCAGTGAAGAAATTCTTTAAAGATCATCTCAAAGTCAAACCAATAGAAGAAAACAAGGC 2427
|||| |||||||||| |||||||| ||||| ||||| | |||| |||||||||||| ||
Sbjct 2256 GCCATTGAAGAAATTTTTTAAAGAGCATCTGAAAGTTGAGCCAACAGAAGAAAACAAAGC 2315
Query 2428 CTTCATGACTTTTGTTATACCACACGACAAAGAGAATCTTTTGACAGGCTTTTTCGCTGA 2487
||||||||||||||||| |||||||||||||| ||||||||||| | || | |
Sbjct 2316 TTTCATGACTTTTGTTATCCCACACGACAAAGAAAATCTTTTGAC-G-CTA---C----A 2366
Query 2488 GCTTCAAGACAGAGAAGAAGAATTTGGAATCTCAGATATCCAACTTGGTCTCGCAACTCT 2547
|| |||||||| |||||||||||||| || |||||||||||||| || |||||
Sbjct 2367 -----AA-ACAGAGAATCTGAATTTGGAATCTCGGACATCCAACTTGGTCTAGCGACTCT 2420
Query 2548 TGAAGAAGTCTTTTTGAACATAGCAAGAAAAGCTGAACTCGAAAGCGCTGCGGTTGATGG 2607
||||||||| ||| | ||||| |||||| | |||||||| |||||||| | | ||| ||
Sbjct 2421 TGAAGAAGTGTTTCTCAACATCGCAAGACAGGCTGAACTAGAAAGCGCAACAGCTGAAGG 2480
Query 2608 AA-CAATGGTCACTCTCGA-TCTAACATCTGGT-TCCTCAGTTGAGATACCGGTGGGGGC 2664
|| || |||||||| | || | || |||| || || ||| | |||||||| ||||| ||
Sbjct 2481 AAACA-TGGTCACTTTGGAGT-TAGCATCAGGCATC-TCACTAGAGATACCTGTGGGAGC 2537
Query 2665 AAGATTTATTGGGATACCGGGA-ACAGAAT-CTGCAGAGAATCCACGAGGAATCATGGTG 2722
||||||| ||||||| || | | |||||| | |||||||||||| | ||| | ||||||
Sbjct 2538 AAGATTTGTTGGGATCCCTG-ATACAGAAAAC-GCAGAGAATCCAAGTGGAGTAATGGTG 2595
Query 2723 GAAGTGTATTGGCAACAAGACGAG-TCAGGTTC-ATTGTGCATCTCAGGACACTCCA-CG 2779
|||||||| ||||||||||||| | || || || || ||||||||| |||||||| | |
Sbjct 2596 GAAGTGTACTGGCAACAAGACG-GCTCGGGGTCGAT-GTGCATCTCTGGACACTC-ATCA 2652
Query 2780 GAGATGC 2786
|||||||
Sbjct 2653 GAGATGC 2659
> AT5G61730.1 | Symbols: ATATH11, ATH11 | ABC2 homolog 11 | chr5:24803583-24807898
REVERSE LENGTH=2823
Length=2823
Score = 920 bits (498), Expect = 0.0
Identities = 731/847 (86%), Gaps = 2/847 (0%)
Strand=Plus/Plus
Query 1450 AGTCCCACCTGTGGATCACGTTACCCCAGATGACGAAGATGTCCTTGAAGAGGAAACTTT 1509
||| ||||| || || || |||| ||||| ||||||||||| ||||||||||| | |||
Sbjct 1422 AGTTCCACCAGTAGAGCATATTACACCAGAGGACGAAGATGTGCTTGAAGAGGAGATTTT 1481
Query 1510 AGTTAAACAACATTCAATGGATGGTTTAGTTGATCCCAACATTGCAGTTCAAATACGTGG 1569
|||||||||||| |||||||||| ||||||||| |||||||||||||| |||| |||
Sbjct 1482 AGTTAAACAACAAGCAATGGATGGAAGAGTTGATCCTAACATTGCAGTTCAGATACATGG 1541
Query 1570 TCTTGCAAAGACTTATCCTGGGACGACGAATTTTGGATGCTGCAAATGCAAGAAAACTCC 1629
|||||||||||| |||||||| || || || |||||||||||||||||| |||||| |
Sbjct 1542 TCTTGCAAAGACATATCCTGGAACAACAAAGCTTGGATGCTGCAAATGCACCAAAACTTC 1601
Query 1630 CCCTTTTCATGCTCTGAAGGGGTTGTGGATGAATATTGCCAAAGATCAGTTATTCTGTCT 1689
|||||||||||| | ||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 1602 GCCTTTTCATGCTGTAAAGGGTTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTCT 1661
Query 1690 TCTTGGACCCAATGGCGCAGGAAAAACAACTACTATCAATTGTTTGACAGGCTTATTTCC 1749
||| ||||| ||||||||||| |||||||||||||| | ||||||||| ||| || |||
Sbjct 1662 TCTCGGACCTAATGGCGCAGGGAAAACAACTACTATTAGTTGTTTGACTGGCATAAATCC 1721
Query 1750 AGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCTGTTGGTATGTC 1809
||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct 1722 AGTCACTGGTGGGGATGCAAAAATCTATGGAAATTCCATAAGAAGCTCTGTTGGTATGTC 1781
Query 1810 CAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTC 1869
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1782 CAACATTCGTAAAATGATAGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTC 1841
Query 1870 TGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCTTCATCGATCAA 1929
| ||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1842 TAGTGAAGAGCACCTCCACCTCTTTGCTAGCATCAAAGGGTTGCCACCATCATCGATCAA 1901
Query 1930 CTCGATGGTTGAGAAGTCACTAGCGGAGGTAAAACTGACAGAAGCAGG-GAAAATCAGGG 1988
||||| | ||||||| ||| | || || || || |||| | | || |||||| || |
Sbjct 1902 ATCGATTGCAGAGAAGTTACTGGTAGATGTGAAGCTAACAGGATC-GGCGAAAATTAGAG 1960
Query 1989 CAGGAAGTTACAGTGGAGGAATGAAGCGCCGACTCAGTGTTGCAGTTTCACTCATTGGTG 2048
|||||||||||||||| |||||||| || || || ||||||||| | ||||||||||||
Sbjct 1961 CAGGAAGTTACAGTGGTGGAATGAAACGTCGGCTGAGTGTTGCAATAGCACTCATTGGTG 2020
Query 2049 ATCCAAAGCTGGTCTTCCTGGACGAACCGACTACAGGCATGGATCCGATCACCAGGAGGC 2108
|||| |||||||| || || || ||||||||||| |||||||| || ||||| ||||| |
Sbjct 2021 ATCCCAAGCTGGTTTTTCTAGATGAACCGACTACTGGCATGGACCCTATCACGAGGAGAC 2080
Query 2109 ATGTGTGGGATATTATACAGGAAACCAAGAAAGGCCGTGCCATTATACTAACGACACATT 2168
|||||||||| |||||||| || | |||||||| |||||||| ||||||||||| ||||
Sbjct 2081 ATGTGTGGGACATTATACAAGAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCATT 2140
Query 2169 CGATGGAGGAAGCTGATATATTAAGTGATCGGATAGGGATAATGGCTAAGGGTAGGCTCC 2228
| ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||||
Sbjct 2141 CTATGGAGGAAGCTGATATTTTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTCC 2200
Query 2229 GCTGCATTGGAACCTCGATCAGATTGAAATCCCGCTTTGGCACAGGTTTTATTGCTAACA 2288
|||||||||||||||| ||||| || ||||| ||||||||||| || ||| |||||| |
Sbjct 2201 GCTGCATTGGAACCTCAATCAGGTTAAAATCTCGCTTTGGCACGGGATTTGTTGCTACCG 2260
Query 2289 TCAGCTT 2295
| |||||
Sbjct 2261 TTAGCTT 2267
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 155818524958
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5