BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485137
Length=2736
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47750.1 | Symbols: ATATH3, ABCA4 | ATP binding cassette sub... 2228 0.0
AT3G47770.1 | Symbols: ATATH5, ATH5, ABCA6 | ABC2 homolog 5 | c... 996 0.0
AT3G47760.1 | Symbols: ATATH4, ATH4, ABCA5 | ABC2 homolog 4 | c... 953 0.0
AT3G47740.1 | Symbols: ATATH2, ATH2, ABCA3 | ABC2 homolog 2 | c... 939 0.0
AT3G47780.1 | Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:176... 893 0.0
AT3G47790.1 | Symbols: ATATH7, ATH7 | ABC2 homolog 7 | chr3:176... 128 3e-28
> AT3G47750.1 | Symbols: ATATH3, ABCA4 | ATP binding cassette subfamily
A4 | chr3:17606427-17610889 FORWARD LENGTH=2844
Length=2844
Score = 2228 bits (1206), Expect = 0.0
Identities = 1683/1909 (88%), Gaps = 50/1909 (3%)
Strand=Plus/Plus
Query 394 CTTTATCTCAAAATATGCTCAGAACTTCTTTCACGGCGAACTCCTCTTCTGACCATTTCT 453
||||||||| ||| | ||||| ||||||||| ||| ||||| | | |||||||||||||
Sbjct 437 CTTTATCTCGGAATCTTCTCAGTACTTCTTTCGCGGTGAACT-C-C-TCTGACCATTTCT 493
Query 454 TGCGTAATCTCGCATACAATGTCTTGGCAAGGTACAACATCAAAATCAGACTACACCAAC 513
||||||||||||| ||||||||||| | ||||||| |||| || |||||||||||||
Sbjct 494 TGCGTAATCTCGCCTACAATGTCTT-G---GGTACAATATCAGAAGCAGACTACACCAA- 548
Query 514 TT-CCATGATCCAGGAATTCACTCAGATCTTCCCATCTT-AAACATCCAACCTCAGTGCA 571
|| | ||||||||| |||||||||||||||||||| || || |||| |||| | ||||
Sbjct 549 TTATCTTGATCCAGGGATTCACTCAGATCTTCCCATTTTCCAA-ATCCGACCTTATTGCA 607
Query 572 CTCCAGCCA-CTACGTTCAAATTCTCATTCCGACAATCACCTCTCAAGTTTCATAAAGAG 630
||||| | | | || || ||||||||| |||||| ||||| ||| |||||||||||||
Sbjct 608 CTCCAACAACCAAC-TTGTCATTCTCATTTCGACAACCACCTATCACGTTTCATAAAGAG 666
Query 631 GTGAGATGCGTTCAAGGATTGAATCTCTGGAGAAATAACTCCA-TAGAGGTCAACGATGA 689
|||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||
Sbjct 667 GTGAGATGCGTTCAAGGATTGAATCTCTGGAGAAATAACT-CAGTAGAGGTCAATGATGA 725
Query 690 GATCTTCAAGGGTTATCGTCAAGGAAATCCTGAAAAGATCATCAATGAGGTTGCTGCAGC 749
|||||| ||||| |||||||||||||||| |||| |||||||||||||||| ||||||||
Sbjct 726 GATCTTTAAGGGCTATCGTCAAGGAAATCATGAAGAGATCATCAATGAGGTCGCTGCAGC 785
Query 750 ATATGATTTCTTGGACACCGATACGAATAACTTCAATGTGACCATCTGGTTTAACTCTAC 809
||| ||| |||||||||| |||| ||| || ||||||||||||||||||| ||||||| |
Sbjct 786 ATACGATCTCTTGGACACTGATAGGAACAAGTTCAATGTGACCATCTGGTATAACTCTTC 845
Query 810 ATACAAGGATGATTACCGAGTACAACAGAGGCGTGTAAAGTATGTCCGAGTTCCTCGCTC 869
||||||| | ||| | ||||||| | ||||||||||||||||||||||| ||||||||
Sbjct 846 TTACAAGGGTAATTTCAAAGTACAAGATAGGCGTGTAAAGTATGTCCGAGTACCTCGCTC 905
Query 870 AGTAAATTTGGTTTCGAATGCTTATCTTCAATTTTTGCGAGGCCCAGGG-ACTAAA-ATG 927
||| ||| ||||||||||||| ||||||| |||||||||||||| ||| || ||| |||
Sbjct 906 AGTCAATATGGTTTCGAATGCATATCTTCGGTTTTTGCGAGGCCC-GGGAAC-AAAGATG 963
Query 928 TTATTCGATTTTGTGAAAGAAACGCCTAAACAAGAAACTAAGCTTCACGTTGACGTAGCT 987
|||||||| ||||||||||||| |||||| ||||||| || ||||| |||||| ||||
Sbjct 964 TTATTCGACTTTGTGAAAGAAATGCCTAAGCAAGAAAGTATGCTTCGCGTTGATATAGCA 1023
Query 988 TCTGTCATTGGCCCCATGTTCTTAACATGGGTTATTGTTCTTTTGTTCCCCGTGATCTTA 1047
||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1024 TCTGTCATTGGCCCCATTTTCTTAACATGGGTTATTGTTCTTTTGTTCCCTGTGATCTTG 1083
Query 1048 AACTCATTGGTGTATGAGAAGCAGCAACATCTAAGAATTATAATGAAAATGCATGGCCTA 1107
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1084 AACTCGTTGGTGTATGAGAAGCAGCAGCATCTAAGAATTATAATGAAAATGCATGGCCTA 1143
Query 1108 GGAGATGGTCCTTATTGGATGATTTCCTACGCCTATTTTCTAGCCATATCCACGTTATAT 1167
||||||||||||||||||||||| ||||||| |||||||| ||||||||||| |||||
Sbjct 1144 GGAGATGGTCCTTATTGGATGATAACCTACGCTTATTTTCTCGCCATATCCACATTATAC 1203
Query 1168 ATTATATGCTTGATGATATTTGGGTCAGCAATAGGTA-TTGTCTC-GTTGCCATATTTTC 1225
|||||||| |||||||||||||||||||||||| | | || || | | | || ||||
Sbjct 1204 ATTATATGTTTGATGATATTTGGGTCAGCAATA-GAACAAGTTTCAG-AG-C-TA-TTTC 1258
Query 1226 TTCTATATATAGAAC---ATTTTTTCCGGTATAATGACTACGGTATCCAGTTCGTTTTCT 1282
|| | | ||| || | || ||||| | |||||||||| | ||||||||| ||||||
Sbjct 1259 -TC-CT-TGTAGGACTGAAGTTCTTCCGCTTTAATGACTACAGCATCCAGTTCATTTTCT 1315
Query 1283 ATTTTCTCTGCATAAATCTGCAAATCTCCGTAGCTTTTCTAGTTTCCTCAGCATTTTCAA 1342
||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct 1316 ATTTTCTCTGCATAAATCTGCAAATCTCCATCGCCTTTCTAGTTTCCTCAGCATTTTCAA 1375
Query 1343 AGGTTGAGACAGCTA-CAGTTGTTGCTTACCTATACGTGTTTGGATCTGGGCTCTTGGGC 1401
||||||||||||| | |||||| |||||| |||||||||||||||||||||| |||||
Sbjct 1376 AGGTTGAGACAGC-ATCAGTTGCGGCTTACTTATACGTGTTTGGATCTGGGCTGTTGGGA 1434
Query 1402 GGGTTCCTCTTCCAGTTTATGTTGGAAGGTTTATCGTTTCCCAGAAGCTGGAtttttttC 1461
|| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||
Sbjct 1435 GGTTTCCTCTTCCAGTTTATGTTGGAAGGTTTATCGTTTCCAAGAGGCTGGATTTTTGTC 1494
Query 1462 ATGGAGTTGTTTCCGGGCTTCTCTTTATACCGTGGTTTGTATGAGTTCTCTCAGTATGCT 1521
|||||||||| ||| ||||||||| |||| ||||| ||||| ||||||||||||||||||
Sbjct 1495 ATGGAGTTGTATCCCGGCTTCTCTCTATATCGTGGATTGTACGAGTTCTCTCAGTATGCT 1554
Query 1522 TT-AATCAGA-AACGTGAATGGGAGCGATGGGATGAAGTGGAAAGATTTCAATGATAGTG 1579
|| || ||| || |||||||||| ||||| |||||||||||| |||||| ||||||||
Sbjct 1555 TTGAA-GAGACAA-TTGAATGGGAGTGATGGAATGAAGTGGAAATATTTCAGTGATAGTG 1612
Query 1580 CAATGGATGAAGTTTTCTACATTATTATTGTCGAGTGGTTTCTCGCACTCATTGCAGCAT 1639
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1613 CAATGGATGAAGTTTTCTACATTATTATTATTGAGTGGTTTCTCGCACTCATTGCAGCAT 1672
Query 1640 ACTATATGGACCGAGTTTCTTCATCCGCGAAAGACCCTTTTTTATGCTTGAAATA-CACT 1698
||||||||||||||||||||||||||||||||||||||||||||| ||||||| | | |
Sbjct 1673 ACTATATGGACCGAGTTTCTTCATCCGCGAAAGACCCTTTTTTATTCTTGAAAAATCTCA 1732
Query 1699 TTCAAGAAATCTCCGTCT--A-AA---CATAGCTTGCAGAGAC-AGGGATCTGCTCTTTC 1751
| |||||||||||| ||| | || |||||||||||||||| ||| |||| || ||||
Sbjct 1733 T-CAAGAAATCTCCTTCTCCACAAAGGCATAGCTTGCAGAGACTAGG-ATCTTCTGTTTC 1790
Query 1752 CGTTGAAATGGACAGACTAGATGTCGCTCAGGAGAGAG-AAAGGGTCAAGCAGCTGATGC 1810
||| |||||||| | ||||||||||| | ||||||||| ||| | || ||||| ||||||
Sbjct 1791 CGTAGAAATGGAGAAACTAGATGTCGTTGAGGAGAGAGCAAAAG-TCGAGCAGTTGATGC 1849
Query 1811 TTGAGTCGAGCACAAGCCATGCGATTGTATGTGACAACCTGAATAAGGTGTATCCAGGTA 1870
|||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||||
Sbjct 1850 TTGAGTCGAGCACAAGCCATGCGATTGTTTGTGACAAGCTGAAAAAGGTGTATCCTGGTA 1909
Query 1871 GGGATGGGAACCCGCCTAAAATGGCCGTTCAAGGGTTATCTCTCGCTGTGCCTTCAGGAG 1930
||||||||||||| ||||||||||||||| |||||||||| | ||||| ||| |||| |
Sbjct 1910 GGGATGGGAACCCACCTAAAATGGCCGTTGGAGGGTTATCTATAGCTGTACCTCCAGGCG 1969
Query 1931 AATGCTTCGGCATGTTAGGACCAAACGGTGCAGGGAAGACATCCTTCATCAATATGATGA 1990
|||| || ||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct 1970 AATGTTTTGGCATGTTAGGCCCCAACGGTGCAGGGAAGACATCATTCATCAATATGATGA 2029
Query 1991 CTGGGCTTGTGAAACCAACATCTGGAATAGCTCTTGTTCAAAGTTTGGACACATGTAAGG 2050
||||||| ||||||||||||||||||| |||||||||| |||||||||||| ||| |||
Sbjct 2030 CTGGGCTAGTGAAACCAACATCTGGAACAGCTCTTGTTGAAAGTTTGGACATATGCCAGG 2089
Query 2051 ATATAGACAGAGTATACACCAGCATGGGTGTTTGCCCACAACATGACTTGCTCTGGGAAA 2110
|||| |||| ||||||||| ||||||||||||||||||||||| |||||||| |||||||
Sbjct 2090 ATATGGACAAAGTATACACTAGCATGGGTGTTTGCCCACAACACGACTTGCTATGGGAAA 2149
Query 2111 CGCTGACAGGAAGGGAACATCTACTCTTTTACGGAAGACTTAAGAATCTCAAAGGCTCTG 2170
| || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 2150 CACTAACAGGAAGGGAACATTTGCTCTTTTACGGAAGACTTAAGAATCTCAAAGGCTCTG 2209
Query 2171 ATCTCCACCAAGCTGTAGAGGAGTCTCTTAAGAGTGTGAACCTATTTCGTGATGGAGTTG 2230
||||| |||||||| |||| ||||||||||||||||||||||||| || || || ||||
Sbjct 2210 ATCTCAACCAAGCTATAGAAGAGTCTCTTAAGAGTGTGAACCTATCACGCGAAGGGGTTG 2269
Query 2231 CTGATAAACCTTCTGGGAAATATAGTGGAGGCATGAAAAGGCGATTAAG 2279
||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 2270 CTGATAAACCTGCTGGGAAATATAGTGGAGGCATGAAAAGGCGACTAAG 2318
Score = 555 bits (300), Expect = 1e-156
Identities = 363/394 (92%), Gaps = 2/394 (1%)
Strand=Plus/Plus
Query 1 ATGGCGAACCATGTTCCCGCAAGTTTCTTGACCCGGGCCAATGCCTTGTTCAGAAAAAAC 60
|||||||| ||||| ||||| ||||||||||| |||| ||||| |||||||||||||||
Sbjct 1 ATGGCGAATCATGTCCCCGCTAGTTTCTTGACGAGGGCTAATGCTTTGTTCAGAAAAAAC 60
Query 61 TTAACCTATCAGAAACGGAACATGTGGAGCAATGTTCGGCTCATTGTGATCCCTTTCTAC 120
|||||||| |||||||||||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct 61 TTAACCTACCAGAAACGGAACATATGGAGTAATGTTCGGCTCATCGTGATTCCTTTCTAC 120
Query 121 CTATGCGTACTTCTAGTGGGGATTCAAGTCCTGTTTGATACACAAGTTAATAACTCTGCT 180
|| || || ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 121 CTCTGTGTGCTTCTAGTGGGGATTCAAGTCTTGTTTGATACACAAGTTAATAACTCTGCT 180
Query 181 GATAATCGTTGTGGTTGTCGATGCATCCACAAAAATGGAGATGGAAAATGCGAAAGACAG 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 181 GATAATCGATGTGGTTGTCGATGCATCCACAAAAATGGAGATGGAAAATGCGAAAGAAAG 240
Query 241 AGTTGTGGTTTACAATATTCATCTCAAACTCAAGCCTCATTTTGTGCCTTTCCC-AACCC 299
||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||
Sbjct 241 AGTTGTGGTTTACAATATTCATCTCTAACTCAAGCCTCCTTTTGTGCCTT-CCCTAACCC 299
Query 300 TCCACCATTGCTCCCGTTGTTACAAATTCCGCGTCCTGAATCTCGTTCAGTTGATCATAC 359
|||||| |||||||||||| |||||||||||||||||||| |||||| |||||||| | |
Sbjct 300 TCCACCGTTGCTCCCGTTGCTACAAATTCCGCGTCCTGAAACTCGTTTAGTTGATCCTGC 359
Query 360 CCGTGGCTCGTGCAGACGGACCGGATCTTGTCCT 393
|||| ||||||||||||| || ||||||||||||
Sbjct 360 CCGTAGCTCGTGCAGACGAACAGGATCTTGTCCT 393
Score = 435 bits (235), Expect = 1e-120
Identities = 272/290 (94%), Gaps = 2/290 (1%)
Strand=Plus/Plus
Query 2448 GTATGGTGGATCTTATGTGTTAACAATGACAACATCATCAGAACATGAAAAAGATGTGGA 2507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2556 GTATGGTGGATCTTATGTGTTAACAATGACAACATCATCAGAACATGAAAAAGATGTGGA 2615
Query 2508 GATGTTGGTTCAAGATGTTTCTCCAAACGCCAAGAAGATATATCACATCGCAGGGACACA 2567
|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2616 GATGTTAATTCAAGATGTTTCTCCAAACGCCAAGAAAATATATCACATCGCAGGGACACA 2675
Query 2568 AAAATTTGAGATCCCAAAAGAAGAAGTACGGGTCTCGGAAGTGTTTCAGGCGGTAGAGAA 2627
||||||||||||||||||||| ||||| ||| || | ||| ||||||| || || |||||
Sbjct 2676 AAAATTTGAGATCCCAAAAGACGAAGTTCGGATCGCAGAATTGTTTCAAGCTGTGGAGAA 2735
Query 2628 GGCGAAAA-GCAATTTTAGGGTGTTTGCTTGGGGACTTGCAGACACAACTCTTGAAGATG 2686
||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2736 GGC-AAAAGGAAATTTTAGGGTGTTTGCTTGGGGACTTGCAGACACAACTCTTGAAGATG 2794
Query 2687 TTTTCATTAAGGTTGCTAGAACTTCTCCGGCCTCTAATGTCTTCTCTTGA 2736
||||||||||||||||||||||| ||| |||||||||||||||||| |||
Sbjct 2795 TTTTCATTAAGGTTGCTAGAACTGCTCAGGCCTCTAATGTCTTCTCATGA 2844
Score = 237 bits (128), Expect = 4e-61
Identities = 157/171 (92%), Gaps = 1/171 (1%)
Strand=Plus/Plus
Query 2276 TAAGCGTGGTTTATATGGATGAGCCAAGCACAGGACTAGATCCAGCTTCAAGAAGGAGCC 2335
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2346 TAAG-GTGGTTTATATGGATGAGCCAAGCACAGGACTTGATCCAGCTTCAAGAAGGAGCC 2404
Query 2336 TATGGACAGCCATCAAATCCGCaaaaaaaaaCACTGCGATAATCCTCACTACTCATTCAA 2395
|||||||||| |||||| |||||||||| ||||||| ||||| ||||||||||| ||||
Sbjct 2405 TATGGACAGCTATCAAAGGCGCAAAAAAACACACTGCAATAATTCTCACTACTCACTCAA 2464
Query 2396 TGGAAGAAGCAGAGTTTCTTTGTGACCGATTGGGAATTTTTGTAGACGGAA 2446
||||||||||||||||||| || ||| |||| || ||||||||||||||||
Sbjct 2465 TGGAAGAAGCAGAGTTTCTCTGCGACAGATTAGGCATTTTTGTAGACGGAA 2515
> AT3G47770.1 | Symbols: ATATH5, ATH5, ABCA6 | ABC2 homolog 5 |
chr3:17618055-17622678 FORWARD LENGTH=2703
Length=2703
Score = 996 bits (539), Expect = 0.0
Identities = 883/1047 (84%), Gaps = 32/1047 (3%)
Strand=Plus/Plus
Query 1246 TTCCGGTAT-AATGACTACGGTATCCAGTTCGTTTTCTATTTTCTCTGCATAAATCTGCA 1304
||||||| | ||||||||| |||||||| | ||||||||||| | |||||||||||
Sbjct 1156 TTCCGGT-TCAATGACTACACCATCCAGTTTATGTTCTATTTTCTTTATATAAATCTGCA 1214
Query 1305 AATCTCCGTAGCTTTTCTAGTTTCCTCAGCATTTTCAAAGGTTGAGACAGCTA-CAGTTG 1363
||| ||| |||| |||||||||||||||||||||||||||| || |||||| | ||||||
Sbjct 1215 AATATCCATAGCCTTTCTAGTTTCCTCAGCATTTTCAAAGGCTGTGACAGC-ATCAGTTG 1273
Query 1364 TTGCTTACCTATACGTGTTTGGATCTGGGCTCTTGGGCGGGTTCCTCTTCCAGTTTATGT 1423
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 1274 TTGCTTACATATACGTGTTTGGATCTGGGCTCTTGGGCGCATTCCTCTTCCAGTTTCTGA 1333
Query 1424 TGGAAGGTTTATCGTTTCCCAGAAGCTGGAtttttttCATGGAGTTGTTTCCGGGCTTCT 1483
| ||| ||||||||||||| ||| | ||||||||| ||||||| |||| ||| |||||||
Sbjct 1334 TAGAAAGTTTATCGTTTCCTAGACGTTGGATTTTTGTCATGGAATTGTATCCCGGCTTCT 1393
Query 1484 CTTTATACCGTGGTTTGTATGAGTTCTCTCAGTATGCTTT--AATCAGAAACGTGAATGG 1541
| |||||||| || |||||||| ||||| || |||||||| || |||||| |||||||
Sbjct 1394 CATTATACCGCGGGTTGTATGAATTCTCCCAATATGCTTTCCAA--AGAAACTTGAATGG 1451
Query 1542 GAGCGATGGGATGAAGTGGAAAGATTTCA-ATGATAGTGCAATGGATGAAGTTTTCTAC- 1599
||| ||||||||||||||||||||||||| | | |||||||||||||||||||||| ||
Sbjct 1452 GAGGGATGGGATGAAGTGGAAAGATTTCAGAGG-TAGTGCAATGGATGAAGTTTTC-ACC 1509
Query 1600 ATTATTATTGTCGAGTGGTTTCTCGCACTCATTGCAGCATACTATATGGACCGAGTTTCT 1659
|| ||||| || |||||| || |||||||| ||||| |||||||||| ||||||||||||
Sbjct 1510 ATCATTATCGTTGAGTGGGTTGTCGCACTCGTTGCAACATACTATATAGACCGAGTTTCT 1569
Query 1660 TCATCCG-CGAAAGACCCTTTTTTATGCTTGAAATACACTTTCAAGAAATCTCCGT-CT- 1716
||||| | | |||||| ||||| || ||||||| || |||||||| |||||| | ||
Sbjct 1570 TCATC-GTCAAAAGACACTTTTGCATTCTTGAAAAACCCTTTCAAGTTATCTCC-TACTC 1627
Query 1717 -A-AA---CATAGCTTGCAGAGACAGGGATCTGCTCTTTCCGTTGAAATGGACAGACTAG 1771
| || | |||||| || | | || |||||| | ||||||| |||||||| | ||| |
Sbjct 1628 CACAAATGCTTAGCTTTCAAAAAGAGAGATCTGATGTTTCCGTAGAAATGGAGAAACTTG 1687
Query 1772 ATGTCGCTCAGGAGAGAGAAAGGGTCAAGCAGCTGATGCTTGAGTCG-AGCACAAGCCAT 1830
||||| |||||||| ||||| |||||||||| |||| ||||| || |||| || |||
Sbjct 1688 ATGTCATTCAGGAGAAAGAAACGGTCAAGCAGTTGATATTTGAG-CGGAGCAAAAATCAT 1746
Query 1831 GCGATTGTATGTGACAACCTGAATAAGGTGTATCCAGGTAGGGATGGGAACCCGCCTAAA 1890
| |||||||||||||||| |||| |||||||||| ||| || ||||||||||| ||||||
Sbjct 1747 GGGATTGTATGTGACAACTTGAAGAAGGTGTATCAAGGCAGAGATGGGAACCCACCTAAA 1806
Query 1891 ATGGCCGTTCAAGGGTTATCTCTCGCTGTGCCTTCAGGAGAATGCTTCGGCATGTTAGGA 1950
|||| ||| || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1807 TTGGCAGTTTGTGGCTTATCTCTCGCTGTGCCGTCAGGAGAATGTTTCGGCATGTTAGGG 1866
Query 1951 CCAAACGGTGCAGGGAAGACATCCTTCATCAATATGATGACTGGGCTTGTGAAACCAACA 2010
|| || || || || ||||| || |||||||| ||||||||||| || ||||||||| ||
Sbjct 1867 CCGAATGGCGCCGGAAAGACCTCGTTCATCAACATGATGACTGGACTCGTGAAACCATCA 1926
Query 2011 TCTGGAAT-AGCTCTTGTTCAAAGTTTGGACACATGTAAGGATATAGACAGAGTATACAC 2069
|| || | |||| |||||||| ||||||||| ||| |||||||| |||| ||| ||||
Sbjct 1927 TCAGGG-TCAGCTTTTGTTCAAGGTTTGGACATATGCAAGGATATGGACAAAGTCTACAT 1985
Query 2070 CAGCATGGGTGTTTGCCCACAACATGACTTGCTCTGGGAAACGCTGACAGG-AAGGGAAC 2128
|||||||||||||||||||| || ||||||||||||||||| |||||||| || | |||
Sbjct 1986 TAGCATGGGTGTTTGCCCACAGCACGACTTGCTCTGGGAAACACTGACAGGGAAAG-AAC 2044
Query 2129 ATCTACTCTTTTACGGAAGACTTAAGAATCTCAAAGGCTC-TGATCTCCACCAAGCTGTA 2187
|||| |||||||| |||||||||||||||||||||||| | ||||||| ||||||| |||
Sbjct 2045 ATCTTCTCTTTTATGGAAGACTTAAGAATCTCAAAGGC-CATGATCTCAACCAAGCCGTA 2103
Query 2188 GAGGAGTCTCTTAAGAGTGTGAACCTATTTCGTG-ATGGAGTTGCTGATAAACCTTCTGG 2246
|| || || || ||||||||||||||||||| || | ||||||||||||| |||| | ||
Sbjct 2104 GAAGAATCACTAAAGAGTGTGAACCTATTTCATGGA-GGAGTTGCTGATATACCTGCCGG 2162
Query 2247 GAAATATAGTGGAGGCATGAAAAGGCG 2273
||||||||| ||||| |||||||||||
Sbjct 2163 GAAATATAGCGGAGGAATGAAAAGGCG 2189
Score = 665 bits (360), Expect = 0.0
Identities = 510/581 (88%), Gaps = 16/581 (3%)
Strand=Plus/Plus
Query 627 AGAGGTGAGATGCGTTCAAGGATTGAATCTCTGGAGAAATAACTCCATAGAGGTCAACGA 686
|||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||
Sbjct 576 AGAGGTGAGATGCGTTCAAGGATTGAATCTTTGGAGAAACAACTCCTTAGAGGTTAACGA 635
Query 687 TGAGATCTTCAAGGG-TTATCGTCAAGGAAATCC-TGAAAAGATCATCAATGAGGTTGCT 744
||||||||| ||||| || ||| || |||| || |||| ||||||||||||||||||||
Sbjct 636 TGAGATCTTTAAGGGCTT-TCG-AAAAGAAAACCATGAAGAGATCATCAATGAGGTTGCT 693
Query 745 GCAGCATATGATTTCTTGGACACCGATACGAATAACTTCAATGTGACCATCTGGT-TTAA 803
|||||||||||| ||||| ||||||||| ||| || ||||||||||||||||||| || |
Sbjct 694 GCAGCATATGATCTCTTGAACACCGATAGGAACAAATTCAATGTGACCATCTGGTATT-A 752
Query 804 CTCTACATACAA-GGATGATTACCGAGTACAACAGAGGCGTGTAAAGTATGTCCGAGTTC 862
| | |||||||| ||| |||| ||||| | ||||||||||||||||| ||||||
Sbjct 753 CACGACATACAAGGGA-GATT------TACAAGATTGGCGTGTAAAGTATGTCAGAGTTC 805
Query 863 CTCGCTCAGTAAATTTGGTTTCGAATGCTTATCTTCAATTTTTGCGAGGCCCAGGGACTA 922
|||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 806 CTCGCTCAGTCAATATGGTTTCGAATGCTTATCTTCAGTTTTTGCGAGGCCCAGGGAC-A 864
Query 923 AA-ATGTTATTCGATTTTGTGAAAGAAACGCCTAAACAAGAAACTAAGCTTCACGTTGAC 981
|| || |||||||| ||||| ||||||| ||||||||||||||||| ||||| | | |||
Sbjct 865 AAGATATTATTCGACTTTGTTAAAGAAATGCCTAAACAAGAAACTAGGCTTCGCATGGAC 924
Query 982 GTAGCTTCTGTCATTGGCCCCATGTTCTTAACATGGGTTATTGTTCTTTTGTTCCCCGTG 1041
| || ||| ||||||||||||| ||||| || ||||||||| ||||| ||||||| |||
Sbjct 925 ATGGCGTCTCTCATTGGCCCCATTTTCTTCACTTGGGTTATTCTTCTTCTGTTCCCTGTG 984
Query 1042 ATCTTAAACTCATTGGTGTATGAGAAGCAGCAACATCTAAGAATTATAATGAAAATGCAT 1101
|| || | ||||||||| |||||||||||||| | |||||||||||||||||||||||||
Sbjct 985 ATTTTGACCTCATTGGTCTATGAGAAGCAGCAGCGTCTAAGAATTATAATGAAAATGCAT 1044
Query 1102 GGCCTAGGAGATGGTCCTTATTGGATGATTTCCTACGCCTATTTTCTAGCCATATCCACG 1161
||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1045 GGCCTAGGAGATGCTCCATATTGGATGATTTCCTACGCATATTTTCTAGCCATATCTACT 1104
Query 1162 TTATATATTATATGCTTGATGATATTTGGGTCAGCAATAGG 1202
||||| ||| ||||||||||||||||||| |||||||||||
Sbjct 1105 TTATACATTGTATGCTTGATGATATTTGGATCAGCAATAGG 1145
Score = 292 bits (158), Expect = 9e-78
Identities = 285/343 (83%), Gaps = 22/343 (6%)
Strand=Plus/Plus
Query 1 ATGGCG-AACCATGTTCCCGCAAGTTTCTTGACCCGGGCCAATGCCTTGTTC-AGAAAAA 58
|||||| |||| |||| |||| ||||||||||| | ||||||||| |||||| || ||||
Sbjct 1 ATGGCGAAACC-TGTTGCCGCCAGTTTCTTGACGCAGGCCAATGCATTGTTCAAG-AAAA 58
Query 59 ACTTAACCTATCAGAAACGGAACATGTGGAGCAATGTTCGGCTCATTGTGATCCCTTTCT 118
||||||| ||||||||||||||||| |||||||| || |||| || |||||||| || |
Sbjct 59 ACTTAACTTATCAGAAACGGAACATATGGAGCAACGTAAGGCTGATCGTGATCCCCTTGT 118
Query 119 ACCTATGCGTACTTCTAGTGGGGATTCAAGTCCTGT-TT-GATACACAAGTTAATAACTC 176
|||| || || ||||||| | ||||||| |||| || ||| ||| ||||| |||||
Sbjct 119 ACCTCTGTGTGGTTCTAGTATGCATTCAAG--CTGTGTTCGATTCACTGGTTAACAACTC 176
Query 177 TGCTGATAATCGTTGTGGTTGTCGAT--G-C-ATC--C-ACAAAAATGGAGATGGAAAAT 229
|| |||||||| ||||||||||||| | | | | | |||||||||||||||| ||||
Sbjct 177 TGTTGATAATCAATGTGGTTGTCGATGCGCCGA-CGACGACAAAAATGGAGATGGCAAAT 235
Query 230 GCGAAAGACAGAGTTGTGGTTTACAATATTCATCTCAAA-CTCAAGCC-TCATTTTGTGC 287
|||||| | | |||||||||||||||||||||||||||| | |||||| || ||||||||
Sbjct 236 GCGAAATAAAAAGTTGTGGTTTACAATATTCATCTCAAAAC-CAAGCCGTC-TTTTGTGC 293
Query 288 CTTTCCC-AACCCTCCACCATTGCTCCCGTTGTTACAAATTCC 329
|||||| ||||||||||| ||||| || |||||||| |||||
Sbjct 294 -TTTCCCTAACCCTCCACCGTTGCTTCCTTTGTTACATATTCC 335
Score = 215 bits (116), Expect = 2e-54
Identities = 154/172 (90%), Gaps = 3/172 (2%)
Strand=Plus/Plus
Query 2276 TAAGCGTGGTTTATATGGATGAGCCAAGCACAGGACTAGATCCAGCTTCAAGAAGGAGCC 2335
|||| || ||||||||||||||||||||||||||||| ||||| |||||||||| | ||
Sbjct 2223 TAAG-GTTGTTTATATGGATGAGCCAAGCACAGGACTTGATCCTGCTTCAAGAATAAACC 2281
Query 2336 TATGGACAGCCATCAAATC-CGCaaaaaaaaaCACTGCGATAATCCTCACTACTCATTCA 2394
||||||||| ||||||| | |||||||||| || | ||||||||||| || |||||||||
Sbjct 2282 TATGGACAGTCATCAAA-CGCGCAAAAAAACACGCAGCGATAATCCTAACGACTCATTCA 2340
Query 2395 ATGGAAGAAGCAGAGTTTCTTTGTGACCGATTGGGAATTTTTGTAGACGGAA 2446
|||||||||||||||||||| ||||||||||||||||||||||| || ||||
Sbjct 2341 ATGGAAGAAGCAGAGTTTCTCTGTGACCGATTGGGAATTTTTGTTGATGGAA 2392
> AT3G47760.1 | Symbols: ATATH4, ATH4, ABCA5 | ABC2 homolog 4 |
chr3:17611787-17616639 FORWARD LENGTH=2619
Length=2619
Score = 953 bits (516), Expect = 0.0
Identities = 881/1050 (84%), Gaps = 53/1050 (5%)
Strand=Plus/Plus
Query 1246 TTCCGGTATAATGACTACGGTATCCAGTTCGTTTTCTATTTTCTCTGCATAAATCTGCAA 1305
||||||| |||||||||| | ||||||||| ||||||||||||||||||||||||| |||
Sbjct 1087 TTCCGGTTTAATGACTACAGCATCCAGTTCATTTTCTATTTTCTCTGCATAAATCTACAA 1146
Query 1306 ATCTCCGTAGCTTTTCTAGTTTCCTCAGCATTTTCAAAGGTTGAGACAGCTA-CAGTTGT 1364
|||||| | || ||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 1147 ATCTCCATCGCCTTTCTAGTTTCCTCAGCATTTTCAAAGATTGAGACAGC-ATCAGTTGC 1205
Query 1365 TGCTTACCTATACGTGTTTGGATCTGGGCTCTTGGGCGGGTTCCTCTTCCAGTTTATGTT 1424
|||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||
Sbjct 1206 TGCTTACCTATATGTGTTTGGATCTGGGCTCTTGGGCGCGTTTCTCTTCCAGTTTCTGTT 1265
Query 1425 GGAAGGTTTATCGTTTCCCAGAAGCTGGAtttttttCATGGAGTTGTTTCCGGGCTTCTC 1484
|||| | | | || ||||| | | |||||||||||| ||||||||||||
Sbjct 1266 GGAA-G------G-------G-AGTTGGATATATATCATGGAGTTGTATCCGGGCTTCTC 1310
Query 1485 TTTATACCGTGGTTTGTATGAGTTCTCTCAGTATGC-TTTAATCAGAAACGTGAATGGGA 1543
|||||| ||||| |||||||||||||| ||||| || ||||| |||||| ||||||| |
Sbjct 1311 TTTATATCGTGGGTTGTATGAGTTCTCACAGTACGCATTTAA-GAGAAACTTGAATGGAA 1369
Query 1544 GCGATGGGATGAAGTGGAAAGATTTCAATGATAGTGCAATGGATGAAGTTTTCTACATTA 1603
| | ||| ||||||||||| ||||||||||||||||||||||| ||| |||||||||| |
Sbjct 1370 GTGGTGGAATGAAGTGGAAGGATTTCAATGATAGTGCAATGGAGGAAATTTTCTACATCA 1429
Query 1604 TTATTGTCGAGTGGTTTCTCGCACTCATTGCAGCATACTATA-TGGACCGAG-TTTCTTC 1661
|||| |||||||||||| | |||||||||||||| ||||||| | || || | |||||
Sbjct 1430 TTATCGTCGAGTGGTTTGTTGCACTCATTGCAGCTTACTATACT-GA-TAAGATATCTTC 1487
Query 1662 ATCCGCGAA-AGACCCTTT-TTTATGCTTGAAATA-C---A--CTTTCAAGAAATCTCCG 1713
|| || ||| ||||||||| ||| | ||||||| | | | ||||||||||||||||
Sbjct 1488 AT-CGGGAATAGACCCTTTCTTT-TTCTTGAAAAACCAAAACCCTTTCAAGAAATCTCCT 1545
Query 1714 TCTAAACATAGCTTGCAGAGACAGGGATCTGCTCTTTCCGTTGAAATGGACAGACTAGAT 1773
||| | || ||||||| ||||| | || ||| || || | |||||||| | | |||||
Sbjct 1546 TCTCCATATGGCTTGCAAAGACAAGTCTCCGCTATTGCCATAGAAATGGAAAAATTAGAT 1605
Query 1774 GTCGCTCAGGAGAGAGAAAGGGTCAAGCAGCTGATGCTTGAGTCGAGCACAAGCCATGCG 1833
|| | | | || | || | ||||||||| |||||||| ||||||||
Sbjct 1606 GT---T---------G-CA----CATG-AGTTAATGCTTGAGACGAGCACAGGCCATGCG 1647
Query 1834 ATTGTATGTGACAACCTGAATAAGGTGTATCCAGGTAGGGATGGGAACCCGCCTAAAATG 1893
|||||||||||||| ||||| |||||||||||| |||||||||||||||| | ||||||
Sbjct 1648 ATTGTATGTGACAATCTGAAGAAGGTGTATCCATGTAGGGATGGGAACCCACAAAAAATG 1707
Query 1894 GCCGTTCAAGGGTTATCTCTCGCTGTGCCTTCAGGAGAATGCTTCGGCATGTTAGGACCA 1953
|| |||| || |||||||| || |||||||||||||||||||| ||||||||||| ||
Sbjct 1708 GCAGTTCGCGGATTATCTCTTGCAGTGCCTTCAGGAGAATGCTTTGGCATGTTAGGGCCC 1767
Query 1954 AACGGTGCAGGGAAGACATCCTTCATCAATATGATGACTGGGCTTGTGAAACCAACATCT 2013
|| ||||| || || || ||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1768 AATGGTGCCGGAAAAACCTCCTTCATCAATATGATGACTGGGCTTATGAAACCAACGTCT 1827
Query 2014 GGAATAG-CTCTTGTTCAAAGTTTGGACACATGTAAGGATATAGACAGAGTATACACCAG 2072
|| || || ||||||| ||||||| | ||| ||||| || |||| |||||||||||
Sbjct 1828 GGGGCAGCCT-TTGTTCATGGTTTGGATATATGCAAGGACATGGACATTGTATACACCAG 1886
Query 2073 CATGGGTGTTTGCCCACAACATGACTTGCTCTGGGAAACGCTGACAGGAAGGGAACATCT 2132
||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 1887 CATTGGTGTTTGTCCACAGCATGACTTGCTCTGGGAAACGCTGACAGGAAGGGAACATTT 1946
Query 2133 ACTCTTTTACGGAAGACTTAAGAATCTCAAAGGCTCTGATCTCCACCAAGCTGTAGAGGA 2192
|||||||| || ||||| |||||||||||||||||||||||| ||||||| ||||| ||
Sbjct 1947 GCTCTTTTATGGGAGACTAAAGAATCTCAAAGGCTCTGATCTCGACCAAGCCGTAGAAGA 2006
Query 2193 GTCTCTTAAGAGTGTGAACCTATTTCGTGATGGAGTTGCTGATAAACCTTCTGGGAAATA 2252
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 2007 ATCTCTTAAGAGTGTGAACCTATTTCGTGGTGGAGTTGCTGATAAACCTGCTGGGAAATA 2066
Query 2253 TAGTGGAGGCATGAAAAGGCGATTAAGCGT 2282
||||||||||||||||||| || |||||||
Sbjct 2067 TAGTGGAGGCATGAAAAGGAGACTAAGCGT 2096
Score = 656 bits (355), Expect = 0.0
Identities = 536/621 (86%), Gaps = 21/621 (3%)
Strand=Plus/Plus
Query 503 ACTACACCAACTT-CCATGATCCAGGAATTCACTCAGATCTTCCCATCTTAAACATCCAA 561
|||||||||| || | ||||||||| |||| |||||||||||||||||| ||| |||||
Sbjct 437 ACTACACCAA-TTATCTTGATCCAGGGATTCTCTCAGATCTTCCCATCTTCAACGTCCAA 495
Query 562 CCTCAGTGCACTCCAG-C-C-ACTACGTTCAAATTCTCATTCCGACAATCACCTCTCAAG 618
|||| ||||||||||| | | || || ||| |||| | |||||||||||||||||| ||
Sbjct 496 CCTCGGTGCACTCCAGACACTACAACATTCTCATTCCCCTTCCGACAATCACCTCTCGAG 555
Query 619 TTTCATAAAGAGGTGAGATGCGTTCAAGGATTGAATCTCTGGAGAAATAACTCCATAGAG 678
||||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct 556 TTTCATAAAGAGGTGCGATGCGTTGAAGGATTGAATCTCTGGCGAAACAACTCCATAGAG 615
Query 679 GTCAACGATGAGATCTTCAAGGGTTATCGTCAAGGAAATCCT-GAAAAGATCATCAATGA 737
| | | |||||||||||||||| ||||| ||||||||| || || |||||||||| ||
Sbjct 616 ATTAGCAATGAGATCTTCAAGGGATATCGACAAGGAAAT-CTCGAGGAGATCATCAACGA 674
Query 738 GGTTGCTGCAGCATATGATTTCTTGGACACCGATACGAATAACTTCAATGTGACCATCTG 797
||| ||||||||||||||| || |||| ||||||| || ||||||||||||||||| ||
Sbjct 675 GGTCGCTGCAGCATATGATCTCATGGATACCGATATAAACAACTTCAATGTGACCATTTG 734
Query 798 GTTTAACTCTACATACAA-GGATGA-TTACCGAGTACAACAGAGGCGTGTAAAGTATGTC 855
|| |||||||||||||| ||| || ||| |||| | ||||||||||||||||||
Sbjct 735 GTACAACTCTACATACAAGGGA-GATTTA-CGAG------ATAGGCGTGTAAAGTATGTC 786
Query 856 CGAGTTCCTCGCTCAGTAAATTTGGTTTCGAATGCTTATCTTCAATTTTTGCGAGGCCCA 915
|||||||| ||||||||||||||||||||||||||||||||| | ||||||| |||| ||
Sbjct 787 CGAGTTCCGCGCTCAGTAAATTTGGTTTCGAATGCTTATCTTGAGTTTTTGCAAGGCTCA 846
Query 916 GGGACTAAA-ATGTTATTCGATTTTGTGAAAGAAACGCCTAAACAAGAAACTAAGCTTC- 973
||||| ||| ||||||||||||||||||||||||| ||| ||||||||||||| ||| |
Sbjct 847 GGGAC-AAAGATGTTATTCGATTTTGTGAAAGAAATGCCAAAACAAGAAACTAGGCTCCG 905
Query 974 ACGTTGACGTAGCTTCTGTCATTGGCCCCATGTTCTTAACATGGGTTATTGTTCTTTTGT 1033
|| | || | || ||| |||||||||| || ||||| |||||||||||| | ||| |||
Sbjct 906 AC-TGGAAATGGCGTCTCTCATTGGCCCTATTTTCTTCACATGGGTTATTCTCCTTCTGT 964
Query 1034 TCCCCGTGATCTTAAACTCATTGGTGTATGAGAAGCAGCAACATCTAAGAATTATAATGA 1093
|||| ||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 965 TCCCGGTGATGTTAACCTCATTGGTGTATGAGAAGCAGCAGCATTTAAGAATTATAATGA 1024
Query 1094 AAATGCATGGCCTAGGAGATG 1114
|||||||||||||||||||||
Sbjct 1025 AAATGCATGGCCTAGGAGATG 1045
Score = 460 bits (249), Expect = 2e-128
Identities = 352/400 (88%), Gaps = 14/400 (4%)
Strand=Plus/Plus
Query 1 ATGGCGAACCATGTTCCCGCAAGTTTCTTGACCCGGGCCAATGCCTTGTTCAGAAAAAAC 60
|||| ||| ||||||||||| ||||||| || | ||| ||| ||||||| ||||| |||
Sbjct 1 ATGGGGAATCATGTTCCCGCGGGTTTCTTTACGCAGGCTAATTCCTTGTTTAGAAAGAAC 60
Query 61 TTAACCTATCAGAAACGGAACATGTGGAGCAATGTTCGGCTCATTGTGATCCCTTTCTAC 120
||||| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 61 TTAACATATCAGAAACGGAACATATGGAGCAACGTTCGGCTCATCGTGATCCCTTTCTAC 120
Query 121 CTATGCGTACTTCTAGTGGGGATTCAAGTCCTGTTTGATACACAAGTTAATAACTCTGCT 180
|| |||||||| ||||| || ||||||||| |||| ||||||||||||||||||||||||
Sbjct 121 CTCTGCGTACTGCTAGTTGGCATTCAAGTCTTGTTCGATACACAAGTTAATAACTCTGCT 180
Query 181 GATAATCGTTGTGGTTGTCGATGCATCCACAAAAATGGAGATGGAAAATGCG-A-AAGAC 238
|||||||| |||||||||||||||||| |||||||||||||||| ||||||| | || |
Sbjct 181 GATAATCGATGTGGTTGTCGATGCATCGACAAAAATGGAGATGGTAAATGCGGACAA-A- 238
Query 239 AGAGTTGTGGTTTACAATATTCATCTCAAA-CTCAAGCCT-CATTTTGTGCCTTTCCC-A 295
||||||| |||||||||||||| ||||||| | ||||||| | |||||||| |||||| |
Sbjct 239 AGAGTTGCGGTTTACAATATTCGTCTCAAAAC-CAAGCCTTC-TTTTGTGC-TTTCCCCA 295
Query 296 ACCCTCCACCATTGCTCCCGTTGTTACAAATTCCGCGTCCTGAATCTCGTTCAGT-TGAT 354
|||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||
Sbjct 296 ACCCTCCACCATTGCTCCCGTTGTTACATATTCCGCGTCCTGAAACTCGTTCT-TCTGAT 354
Query 355 CAT-ACCCGTGGCTCGTGCAGACGGACCGGATCTTGTCCT 393
| | ||| ||| ||||||||||| || ||||||||||||
Sbjct 355 CGTGACC-GTGACTCGTGCAGACAAACTGGATCTTGTCCT 393
Score = 440 bits (238), Expect = 3e-122
Identities = 273/290 (94%), Gaps = 2/290 (1%)
Strand=Plus/Plus
Query 2448 GTATGGTGGATCTTATGTGTTAACAATGACAACATCATCAGAACATGAAAAAGATGTGGA 2507
|||||||||||||||||| ||||| ||||||||| |||| ||||||||||| ||||||||
Sbjct 2331 GTATGGTGGATCTTATGTTTTAACTATGACAACACCATCGGAACATGAAAAGGATGTGGA 2390
Query 2508 GATGTTGGTTCAAGATGTTTCTCCAAACGCCAAGAAGATATATCACATCGCAGGGACACA 2567
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2391 GATGTTGGTTCAAGATGTTTCTCCAAACGCCAAGAAAATATATCACATCGCAGGGACACA 2450
Query 2568 AAAATTTGAGATCCCAAAAGAAGAAGTACGGGTCTCGGAAGTGTTTCAGGCGGTAGAGAA 2627
|||||||||||| |||||||| ||||| ||| |||||||||||||||||||||| |||||
Sbjct 2451 AAAATTTGAGATACCAAAAGAGGAAGTTCGGATCTCGGAAGTGTTTCAGGCGGTGGAGAA 2510
Query 2628 GGCGAAAAG-CAATTTTAGGGTGTTTGCTTGGGGACTTGCAGACACAACTCTTGAAGATG 2686
||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2511 GGC-AAAGGACAATTTTAGGGTGTTTGCTTGGGGACTTGCAGACACAACTCTTGAAGACG 2569
Query 2687 TTTTCATTAAGGTTGCTAGAACTTCTCCGGCCTCTAATGTCTTCTCTTGA 2736
||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 2570 TTTTCATTAAGGTTGCTAGAACTGCTCAGGCCTCTAATGTCTTCTCTTGA 2619
Score = 237 bits (128), Expect = 4e-61
Identities = 158/172 (92%), Gaps = 3/172 (2%)
Strand=Plus/Plus
Query 2276 TAAGCGTGGTTTATATGGATGAGCCAAGCACAGGACTAGATCCAGCTTCAAGAAGGAGCC 2335
|||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 2121 TAAG-GTGGTTTATATGGATGAGCCAAGCACAGGACTTGATCCGGCTTCAAGAAGGAGCT 2179
Query 2336 TATGGACAGCCATCAAATCC-GCaaaaaaaaaCACTGCGATAATCCTCACTACTCATTCA 2394
||||||||||||||||| | |||||||| ||||||||||||||||||| ||||| |||
Sbjct 2180 TATGGACAGCCATCAAA-CGTGCAAAAAACCACACTGCGATAATCCTCACGACTCACTCA 2238
Query 2395 ATGGAAGAAGCAGAGTTTCTTTGTGACCGATTGGGAATTTTTGTAGACGGAA 2446
|||||||||||||||||||| ||||||||||| || ||||||||||||||||
Sbjct 2239 ATGGAAGAAGCAGAGTTTCTATGTGACCGATTAGGCATTTTTGTAGACGGAA 2290
> AT3G47740.1 | Symbols: ATATH2, ATH2, ABCA3 | ABC2 homolog 2 |
chr3:17600651-17604965 FORWARD LENGTH=2799
Length=2799
Score = 939 bits (508), Expect = 0.0
Identities = 854/1016 (84%), Gaps = 43/1016 (4%)
Strand=Plus/Plus
Query 1278 TTTCTATTTTC-TCTGCATAAATCTGCAAATCTCCGTAGCTTTTCTAGTTTCCTCAGCAT 1336
|||||| |||| ||| ||||||||| ||||||||| |||| |||||| |||||||||| |
Sbjct 1275 TTTCTA-TTTCGTCTACATAAATCTACAAATCTCCATAGCCTTTCTACTTTCCTCAGCGT 1333
Query 1337 TTTCAAAGGTTGAGACAGCTA-CAGTTGTTGCTTACCTATACGTGTTTGGATCTGGGCTC 1395
||||||||||||||||||| | |||| | ||||||||||||||||||||||||||| |||
Sbjct 1334 TTTCAAAGGTTGAGACAGC-ATCAGTCGCTGCTTACCTATACGTGTTTGGATCTGGACTC 1392
Query 1396 TTGGGCGGGTTCCTCTTCCAGTTTATGTTGGAAGGTTTATCGTTTCCCAGAAGCTGGAtt 1455
||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||||
Sbjct 1393 TTGGGTATGTTCCTCTTCCAGTTTCTATTGGAAGGTTTATCGTTTCCCAGAAGATGGATT 1452
Query 1456 tttttCATGGAGTTGTTTCCGGGCTTCTCTTTATACCGTGGTTTGTATGAGTTCTCTCAG 1515
||| | |||||||||| ||| |||||||| |||||||| || |||||||||||||| |||
Sbjct 1453 TTTGTAATGGAGTTGTATCCTGGCTTCTCCTTATACCGCGGGTTGTATGAGTTCTCCCAG 1512
Query 1516 TATGCTTTAATCA--GAAACGTGAATGGGAGCGATGGGATGAAGTGGAAAGATTTCAATG 1573
|||| || |||| ||||| ||||||||| |||||||||||||||||| |||| | ||
Sbjct 1513 AATGC-TT-ATCAGGGAAACTTGAATGGGAAAGATGGGATGAAGTGGAAATATTTTAGTG 1570
Query 1574 ATAGTGCAATGGATGAAGTTTTCTACATTATTATTGTCGAGTGGTTTCTCGCACTCATTG 1633
||| |||||| ||||||||||||||||| |||||||| ||||||||| | ||||||||||
Sbjct 1571 ATAATGCAATTGATGAAGTTTTCTACATCATTATTGTTGAGTGGTTTGTTGCACTCATTG 1630
Query 1634 CAGCATACTATATGGACCGAG-TTTCTTCATCCGCG-AAAGACCCTTTT-TTATGCTTGA 1690
|| |||||||||| || || | |||||||| | | ||||| |||||| || | |||||
Sbjct 1631 CAACATACTATATCGA-TAAGATGTCTTCATCAG-GAAAAGA-CCTTTTGTTTTTCTTGA 1687
Query 1691 AATACACTTTCAAGAAATCTCC-GTCTA-A-A---CATAGCTTGCAGAGACAGGGATCTG 1744
|| | || | | ||| | || || | | | ||||||||||| | ||||| ||||
Sbjct 1688 AA-A-AC---C-A-AAA-C-CCTTTCAAGATATCTCATAGCTTGCAAAAACAGGTCTCTG 1738
Query 1745 CTCTTTCCGTTGAAATGGACAGACTAGATGTCGCTCAGGAGAGAG-AAAGGGT-CAAGCA 1802
| ||||||| |||||||| | |||||||||| ||| ||||| | ||| | | | | ||
Sbjct 1739 CAATTTCCGTAGAAATGGAGAAACTAGATGTCATTCACGAGAGTGAAAAAGTTGC-A-CA 1796
Query 1803 GCTGATGCTTGAGTCGAGCACAAGCCATGCGATTGTATGTGACAACCTGAA-TAAGGTGT 1861
|||||||| ||||| |||||||||||||| ||||||||||| || | || ||||| |
Sbjct 1797 ACTGATGCTAGAGTCAAGCACAAGCCATGCAATTGTATGTGATAA-GTTAAGAAAGGTTT 1855
Query 1862 ATCCAGGTAGGGATGGGAACCCGCCTAAAATGGCCGTTCAAGGGTTATCTCTCGCTGTGC 1921
|||| ||||||||||||||||||||||||| ||| |||| || |||||| ||||||||||
Sbjct 1856 ATCCTGGTAGGGATGGGAACCCGCCTAAAAAGGCAGTTCGAGTGTTATCCCTCGCTGTGC 1915
Query 1922 CTTCAGGAGAATGCTTCGGCATGTTAGGACCAAACGGTGCAGGGAAGACATCCTTCATCA 1981
|||||||||||||||| ||||||||||| || || ||||| || ||||| || || ||||
Sbjct 1916 CTTCAGGAGAATGCTTTGGCATGTTAGGGCCCAATGGTGCTGGCAAGACCTCTTTTATCA 1975
Query 1982 ATATGATGACTGGGCTTGTGAAACCAACATCTGGAATAGCTCTTGTTCAAAGTTTGGACA 2041
|||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||| |
Sbjct 1976 ATATGATGACTGGGCTTGTGAAACCAACTTCTGGAGCAGCTTTTGTTCAAGGTTTGGATA 2035
Query 2042 CATGTAAGGATATAGACAGAGTATACACCAGCATGGGTGTTTGCCCACAACATGACTTGC 2101
||| |||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct 2036 TATGCAAGGATATGGACAGAGTATACACTAGCATGGGTGTATGCCCGCAACACGACTTGC 2095
Query 2102 TCTGGGAAACGCTGACAGGAAGGGAACATCTACTCTTTTACGGAAGACTTAAGAATCTCA 2161
| |||||||| |||||||| || |||||||| | ||||| || ||||||||||||||||
Sbjct 2096 TATGGGAAACACTGACAGGGAGAGAACATCTGTTGTTTTATGGGAGACTTAAGAATCTCA 2155
Query 2162 AAGGC-TCTGATCTCCACCAAGCTGTAGAGGAGTCTCTTAAGA-GTGTGAACCTATTTCG 2219
||||| | ||||||| |||||||||| || |||||||||| || |||| ||||| ||||
Sbjct 2156 AAGGCGT-TGATCTCAACCAAGCTGTGGAAGAGTCTCTTA-GAAGTGTCAACCT-TTTCC 2212
Query 2220 T-G-ATGGAGTTGCTGATAAACCTTCTGGGAAATATAGTGGAGGCATGAAAAGGCG 2273
| | ||||||||||| |||||| | |||||||| || ||||| |||||||||||
Sbjct 2213 ACGGA-GGAGTTGCTGACAAACCTGCCGGGAAATACAGCGGAGGTATGAAAAGGCG 2267
Score = 508 bits (275), Expect = 8e-143
Identities = 511/623 (82%), Gaps = 23/623 (4%)
Strand=Plus/Plus
Query 593 TCTCATTCCGACAATCACCTCTCAAGTTTCA-TAAAGAGGTGAGATGCGTTCAAGGATTG 651
||||| || |||||||||||||||| ||| | ||||| ||||||| ||||||||||||
Sbjct 629 TCTCAATCGGACAATCACCTCTCAA-TTTTACGAAAGATATGAGATGTGTTCAAGGATTG 687
Query 652 AATCTCTGGAGAAATAACTCCATAGAGGTCAA-CGATGAGATCTTC-AAGGGTTATCGTC 709
||||| ||||||||||||||||| ||||| || | |||| | ||| || ||||||| |
Sbjct 688 AATCTTTGGAGAAATAACTCCATTGAGGTGAATC-TTGAGCTTTTCGAA-GGTTATCATA 745
Query 710 AAGGAAATCCTGAAAAG-ATCATCAATGAGGTTGCTGCAGCATATGATTTCTTGGACACC 768
|||||||| ||| | | || || |||||| ||| ||||||||| ||| |||| |||||
Sbjct 746 AAGGAAATTCTG-ATGGAATGATAAATGAGATTGTTGCAGCATACGATCTCTTCGACACA 804
Query 769 GATACGAATAACTTCAATGTGACCATCTGGTTTAACTCTACATACAAGGATGATTACCGA 828
||| || |||||||||||| | ||| ||||||||| | |||||||||||||| | | |
Sbjct 805 AATATGACTAACTTCAATGTAAACATATGGTTTAACGCAACATACAAGGATGA--AGCAA 862
Query 829 GTACAACAGAGGCGTGTAAAGTATGTCCGAGTTCCTCGCTCAGTAAATTTGGTTTCGAAT 888
| | || || | | ||| || ||||||||| || |||| ||| |||| ||| || |||
Sbjct 863 G-A-AA-TCAGCCTTATAAGGT-TGTCCGAGTACCCCGCTTAGTCAATTGGGTGTCAAAT 918
Query 889 GCTTATCTTCAATTTTTGCGAGGCCC-AGGGACTAAA-ATGTTATTCGATTTTGTGAAAG 946
||||||||||||| ||||| |||||| | |||| ||| ||||| || || ||||| ||||
Sbjct 919 GCTTATCTTCAATATTTGCAAGGCCCTA-GGAC-AAAGATGTTGTTTGAGTTTGTCAAAG 976
Query 947 AAACGCCTAAACAAGAAACTAAGCTTCACGT-T-GACGTAGCTTCTGTCATTGGCCCCAT 1004
||| |||||||| ||||||||| ||| ||| | ||| | || ||| | ||||| || ||
Sbjct 977 AAATGCCTAAACCAGAAACTAAACTT--CGTCTAGACATCGCCTCTCTAATTGGTCCAAT 1034
Query 1005 GTTCTTAACATGGGTTATTGTTCTTTTGTTCCCCGTGATCTTAAACTCATTGGTGTATGA 1064
||||| |||||||||||| | ||| || | || |||||||| || ||||||||||||||
Sbjct 1035 ATTCTTTACATGGGTTATTCTCCTTCTGCTACCGGTGATCTTGAATTCATTGGTGTATGA 1094
Query 1065 GAAGCAGCAACATCTAAGAATTATAATGAAAATGCATGGCCTAGGAGATGGTCCTTATTG 1124
|||||| || | ||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1095 GAAGCAACAGCGTCTTAGAATTATAATGAAAATGCATGGCCTAGGAGATGGTCCATATTG 1154
Query 1125 GATGATTTCCTACGCCTATTTTCTAGCCATATCCACGTTATATATTATATGCTTGATGAT 1184
||| |||||||||||||||||||| || |||||||||| ||||| |||| |||||||||
Sbjct 1155 GATCATTTCCTACGCCTATTTTCTCGCTTTATCCACGTTCTATATAATATTCTTGATGAT 1214
Query 1185 ATTTGGGTCAGCAATAGGTATTG 1207
|||||||||| |||||| ||||
Sbjct 1215 CTTTGGGTCAGTAATAGG-ATTG 1236
Score = 399 bits (216), Expect = 5e-110
Identities = 269/295 (91%), Gaps = 2/295 (1%)
Strand=Plus/Plus
Query 2443 GGAATGTATGGTGGATCTTATGTGTTAACAATGACAACATCATCAGAACATGAAAAAGAT 2502
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2506 GGAAGGTATGGTGGATCTTATGTGTTAACAATGACAACATCATCAGAACATGAGAAAGAT 2565
Query 2503 GTGGAGATGTTGGTTCAAGATGTTTCTCCAAACGCCAAGAAGATATATCACATCGCAGGG 2562
|||||||||||||||||||| ||||| ||||| | |||||||||||| |||||||||||
Sbjct 2566 GTGGAGATGTTGGTTCAAGAAGTTTCCCCAAATGTCAAGAAGATATACCACATCGCAGGA 2625
Query 2563 ACACAAAAATTTGAGATCCCAAAAGAAGAAGTACGGGTCTCGGAAGTGTTTCAGGCGGTA 2622
||||| ||||||||||| |||||||| ||||| ||| |||||||||||||||||| ||||
Sbjct 2626 ACACAGAAATTTGAGATTCCAAAAGACGAAGTTCGGATCTCGGAAGTGTTTCAGGTGGTA 2685
Query 2623 GAGAAGGCGAAA-AGCAATTTTAGGGTGTTTGCTTGGGGACTTGCAGACACAACTCTTGA 2681
|| ||||| ||| |||||||| | ||||||||||||||||||||| ||||||||||| ||
Sbjct 2686 GAAAAGGC-AAAGAGCAATTTCAAGGTGTTTGCTTGGGGACTTGCTGACACAACTCTCGA 2744
Query 2682 AGATGTTTTCATTAAGGTTGCTAGAACTTCTCCGGCCTCTAATGTCTTCTCTTGA 2736
||||||||| |||||||||||||||||| ||| |||| ||||||||||||||||
Sbjct 2745 AGATGTTTTTATTAAGGTTGCTAGAACTGCTCAAGCCTTTAATGTCTTCTCTTGA 2799
Score = 198 bits (107), Expect = 2e-49
Identities = 269/343 (78%), Gaps = 28/343 (8%)
Strand=Plus/Plus
Query 16 CCC-GCAAGTTTCTTGACCCGGGCCAATGCCT-T-GTTCAGAAAAAACTTAACCTATCAG 72
||| || ||||||| ||| || ||||||| || | || |||||||||||||||||||||
Sbjct 15 CCCAGCCAGTTTCTGGACGCGTGCCAATG-CTATACTT-AGAAAAAACTTAACCTATCAG 72
Query 73 AAACGGAACATGTGGAGCAATGTTCGGCTCATTGTGATCCCTTTCTACCTATGCGTACTT 132
|||||||| || |||||||||||||| || ||| |||| ||||||||||| ||| || ||
Sbjct 73 AAACGGAATATATGGAGCAATGTTCGACTTATTATGATTCCTTTCTACCTCTGCATAGTT 132
Query 133 CTAGTGGGGATTCAAGTCCT-GTTTGATACACAAGTTAATAACTCTGCT-GATAATCGTT 190
|| ||| ||||||| | | ||||||| ||||||| ||||||||| | ||||||| |
Sbjct 133 CTTGTGTTTATTCAAG-CTTTGTTTGATTCACAAGTCAATAACTCTT-TAGATAATCAAT 190
Query 191 GTGGTTGTCGATGCATCCACAAAAAT-GGAGATGGAAAATGCGAAA-GACAGAGTTGTGG 248
||||||||| |||||| ||||| | |||||||| |||||| ||| ||| | ||||
Sbjct 191 GTGGTTGTCAATGCATTGACAAAC-TCGGAGATGGTAAATGCCAAATGACC---T-GTGG 245
Query 249 TTTACAATATTC-ATCTCAA-ACTCAAGCCT-CATTTTGTGCCTTTCCCAAC-CCTCCAC 304
|||| ||||||| | ||| | ||||| | | |||||||| | |||||| || | ||
Sbjct 246 TTTAGAATATTCGA-CTCGGGA-TCAAGGATTC-TTTTGTGC-TATCCCAAAACCACAAC 301
Query 305 CATTGC-TCCCGTTG-TTACAAATTCCGCGTCCTGAATCTCGT 345
||| || ||| ||| || | |||||| |||||||| | ||||
Sbjct 302 CATGGCCTCCA-TTGATT-CTAATTCCACGTCCTGAGTATCGT 342
Score = 193 bits (104), Expect = 1e-47
Identities = 151/173 (87%), Gaps = 5/173 (3%)
Strand=Plus/Plus
Query 2276 TAAGCGTGGTTTATATGGATGAGCCAAGCACAGGACTAGATCCAGCTTCAAGAAGGAGCC 2335
|||| || |||||||||||||||||||||||||| || |||||||| || |||| || ||
Sbjct 2301 TAAG-GTCGTTTATATGGATGAGCCAAGCACAGGGCTTGATCCAGCCTCGAGAAAGAACC 2359
Query 2336 TATGGACAGCCATCAA-ATCCGCaaaaaaaaaCACTGCGATAATCCTCACTACTCATTCA 2394
||||||||| |||||| | |||||||| | | |||||||||||||||||||||||||||
Sbjct 2360 TATGGACAGTCATCAAGA-ACGCAAAAAGACATACTGCGATAATCCTCACTACTCATTCA 2418
Query 2395 ATGGAAGAAGCAGAGTTTCTTTGTGACCGATT-GGGAATTTTTGTAGACGGAA 2446
|||||||||||||||||||| || |||||| | |||| ||||||| || ||||
Sbjct 2419 ATGGAAGAAGCAGAGTTTCTCTGCGACCGACTAGGGA-TTTTTGTTGATGGAA 2470
> AT3G47780.1 | Symbols: ATATH6, ATH6 | ABC2 homolog 6 | chr3:17624479-17629013
FORWARD LENGTH=2870
Length=2870
Score = 893 bits (483), Expect = 0.0
Identities = 851/1028 (83%), Gaps = 28/1028 (3%)
Strand=Plus/Plus
Query 1260 CTACGGTATCCAGTTCGTTTTCTATTTTCTCTGCATAAATCTGCAAATCTCCGTAGCTTT 1319
|||| | ||||||||||| ||||||||||||| |||||||||||||| || | || ||
Sbjct 1278 CTACAGCATCCAGTTCGTATTCTATTTTCTCTATTTAAATCTGCAAATCGCCCTTGCCTT 1337
Query 1320 TCTAGTTTCCTCAGCATTTTCAAAGGTTGAGACAGCTACAGTTG-TTGCTTACCTATACG 1378
||||||||| |||| ||||||||| || ||||| | ||||||| || ||||| ||||||
Sbjct 1338 TCTAGTTTCTTCAGTATTTTCAAAAGTCAAGACATCAACAGTTGCTT-CTTACATATACG 1396
Query 1379 TGTTTGGATCTGGGCTCTTGGGCGGGTTCCT-CTTCCAGTTTATG-TTGGAAGGTTTATC 1436
||||||||||||| || ||||| ||| || | || | ||| || || |||| || |||
Sbjct 1397 TGTTTGGATCTGGACTTTTGGGTTTGTTTCTAC-TCAACTTTCTGATT-GAAGATTCATC 1454
Query 1437 GTTTCCC-AGAAGCTGGAtttttttCATGGAGTTGTTTCCGGGCTTCTCTTTATACCGTG 1495
||||| ||| |||||||| || |||||||||| | ||| |||||||| ||||||||||
Sbjct 1455 -ATTCCCTAGAGGCTGGATTATTGTCATGGAGTTATATCCTGGCTTCTCCTTATACCGTG 1513
Query 1496 GTTTGTATGAGTTCTCTCAGTATGCTTTAATCAGAAACGTGA-ATGGGAGCGATGGGATG 1554
| |||||||||| | || | |||||| ||||| ||| | |||| |||||||||
Sbjct 1514 GCCTGTATGAGTTGGCGCAATTTGCTTTCCGGGGAAACTTGAGAGGGGA-AGATGGGATG 1572
Query 1555 AAGTGGAAAGATTTCAATGATAGTGCAATGGATGAAGTTTTCTACATTATTATTGTCGAG 1614
|||||||||||||| |||||||||||||||||| ||||| ||||| ||| | || ||
Sbjct 1573 AAGTGGAAAGATTTTGGTGATAGTGCAATGGATGATGTTTTTTACATCATTGTCGTTGAA 1632
Query 1615 TGGTTTCTCGCACTCATTGCAGCATACTATATGGACCGAG-TTTCTTCATCCGCGAA-AG 1672
|||||||| ||||||||||||||||||||||| || || | |||||||||| ||| |
Sbjct 1633 TGGTTTCTTGCACTCATTGCAGCATACTATATCGA-TAAGATATCTTCATCCG-GAAGAA 1690
Query 1673 ACCCTTTTTTATGCTTG-AAATACACTTTCAAGAAATCTCCGTC--T---AA-ACATAGC 1725
|||| || || | |||| ||| || |||||||||||||||| || | || || |||
Sbjct 1691 ACCCGTTGTTCTTCTTGCAAA-ACCCTTTCAAGAAATCTCCTTCTTTGAGAAGACCTAGT 1749
Query 1726 TTGCAGAGACAGGGATCTGCTCTTTCCGTTGAAATGGACAGACTAGATGTCGCTCAGGAG 1785
|||||||| || || || | || ||||| ||||| | || |||||| |||| |||
Sbjct 1750 TTGCAGAGGCAAGGCTCCAAAGTCTCAGTTGATATGGAAAAACCAGATGTTACTCACGAG 1809
Query 1786 AG-AGAAAGGGTCAAGCAGCTGATGCTTGAGTCGAGCACAAGCCATGCGATTGTATGTGA 1844
|| | ||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 AGTA-AAAAAGTCGAGCGGTTGATGCTTGAGTCGAGCACAAGCCATGCGATTGTATGTGA 1868
Query 1845 CAACCTGAATAAGGTGTATCCAGGTAGGGATGGGAACCCGCCTAAAATGGCCGTTCAAGG 1904
||||||||| ||||||||||| ||||| |||||||||||||||||| |||| |||| ||
Sbjct 1869 CAACCTGAAGAAGGTGTATCCTGGTAGAGATGGGAACCCGCCTAAATTGGCAGTTCGTGG 1928
Query 1905 GTTATCTCTCGCTGTGCCTTCAGGAGAATGCTTCGGCATGTTAGGACCAAACGGTGCAGG 1964
||||||||| || |||||||||||||||||||||||||||||||| || || ||||| ||
Sbjct 1929 GTTATCTCTTGCAGTGCCTTCAGGAGAATGCTTCGGCATGTTAGGTCCCAATGGTGCTGG 1988
Query 1965 GAAGACATCCTTCATCAATATGATGACTGGGCTTGTGAAACCAACATCTGGAATAGCTCT 2024
||||| |||||||||||||||||||||||||| ||||||| |||||||| | ||| ||
Sbjct 1989 AAAGACTTCCTTCATCAATATGATGACTGGGCTCCTGAAACCGACATCTGGGACAGCACT 2048
Query 2025 TGTTCAAAGTTTGGACACATGTAAGGATATAGACAGAGTATACACCAGCATGGGTGTTTG 2084
||||||| ||||||| | ||| || ||||| |||||||| |||||||||||||| || ||
Sbjct 2049 TGTTCAAGGTTTGGATATATGCAATGATATGGACAGAGTGTACACCAGCATGGGCGTATG 2108
Query 2085 CCCACAACATGACTTGCTCTGGGAAACGCTGACAGGAAGGGAACATCTACTCTTTTACGG 2144
||| || ||||| ||||| |||||||| |||||||||||||||||||| || ||||| ||
Sbjct 2109 CCCGCAGCATGATTTGCTATGGGAAACACTGACAGGAAGGGAACATCTGCTGTTTTATGG 2168
Query 2145 AAGACTTAAGAATCTCAAAGGCTCTGATCTCCACCAAGCTGTAGAGGAGTCTCTTAAGAG 2204
||||||||||||||||||||| |||||||| |||||||||| || ||||||||||||||
Sbjct 2169 GAGACTTAAGAATCTCAAAGGCGCTGATCTCAACCAAGCTGTGGAAGAGTCTCTTAAGAG 2228
Query 2205 TGTGAACCTATTTCG-TG-ATGGAGTTGCTGATAAACCTTCTGGGAAATATAGTGGAGGC 2262
||| ||||| |||| || | |||||||| || || ||| ||||||||||||| |||||
Sbjct 2229 TGTCAACCT-TTTCCATGGA-GGAGTTGCGGACAAGCCTGCTGGGAAATATAGCGGAGGT 2286
Query 2263 ATGAAAAG 2270
||||||||
Sbjct 2287 ATGAAAAG 2294
Score = 540 bits (292), Expect = 3e-152
Identities = 584/720 (81%), Gaps = 40/720 (6%)
Strand=Plus/Plus
Query 500 CAGACTACACCAACTT-CCATGATCCAGGAATT-CACTCAGATCTTCCCATCTTA-AACA 556
|||| | |||||| || | ||||||||| ||| | |||| ||||| ||||| || || |
Sbjct 557 CAGATTTCACCAA-TTATCTTGATCCAGGGATTGC-CTCAAATCTTTCCATC-TACAATA 613
Query 557 TCCAACCTCAGTGCACTCCAGCCACTACG-TTCAAATTCTCATTCCG-ACAATCACCTCT 614
||||||||| ||||| || | ||||| ||| |||||||| || |||| |||||||
Sbjct 614 TCCAACCTCGGTGCATTCTAAATGCTACGTTTC-CGTTCTCATT-CGAACAACCACCTCT 671
Query 615 CAAGTTTCATAAAGAGGTGAGATGCGTTCAAGGATTGAATCTCTGGAGAAATAACTCCAT 674
||||||| | |||||| ||||||| |||||||||| ||||| |||| ||||| |||||
Sbjct 672 CAAGTTTGAGAAAGAGTTGAGATGTGTTCAAGGATCAAATCTTTGGACAAATACCTCCAA 731
Query 675 AGAGGTCAACGATGAGATCTTCAAGGGTTAT-CGTCAAGGAAATCCTGA---AAAGATCA 730
||||||||| ||| |||| |||||||||||| | ||||||| || || |||||| |
Sbjct 732 AGAGGTCAATGATAAGATTTTCAAGGGTTATAAG-AAAGGAAACCCCGAGGGAAAGAT-A 789
Query 731 TCAATGAGGTTGCTGCAGCATATGATTTCTTGGACACCGATACGAATAACTTCAATGTGA 790
|||||| | ||||||||||||||| ||||| |||| |||| ||| || || ||||||
Sbjct 790 --AATGAGATCGCTGCAGCATATGATCTCTTGAACACTGATAGGAACAATTTTAATGTG- 846
Query 791 C-CATCTGGTTTAACTCTACATACAAGGATGATTACCGAGTACAACAGAGGCGTGTAAAG 849
| |||||||| ||| || || |||||||| || | | || | || ||| | | |||||
Sbjct 847 CACATCTGGTATAATTCAACGTACAAGGACGA-T-GC-AGGA-AATAGA--CTTATAAAG 900
Query 850 TATG-TCCGAGTTCCTCGCTCAGTAAATTTGGTTTCGAATGCTTATCTTCAATTTTTGCG 908
| || |||| ||||| |||||||| |||||||| || |||||||| ||||||||| | |
Sbjct 901 T-TGATCCGTGTTCCCCGCTCAGTCAATTTGGTGTCAAATGCTTACCTTCAATTTCTACA 959
Query 909 AGGCCCAGGGACTAA-AATGTTATTCGATTTTGTGAAAGAAACGCCTAAACAAGAAACTA 967
||| || ||||| || ||||| || || | ||| ||||||| |||||||| |||||| |
Sbjct 960 AGGACCGGGGAC-AAGGATGTTGTTTGAATATGTCAAAGAAATGCCTAAACCAGAAAC-A 1017
Query 968 AG-CTTCACGT-T-GACGTAGCTTCTGTCATTGGCCCCATGTTCTTAACATGGGTTATTG 1024
|| ||| ||| | ||| | || ||| | ||||||||| | ||||| || |||||||||
Sbjct 1018 AGTCTT--CGTCTGGACATTGCGTCTCTAATTGGCCCCCTTTTCTTCACCTGGGTTATTC 1075
Query 1025 TTCTTTTGTTCCCCGTGATCTTAAAC-TCATTGGTGTATGAGAAGCAGCAACATCTAAGA 1083
||||| ||||||| |||||||| | ||||| ||||||||||| |||||||||||||||
Sbjct 1076 TTCTTCTGTTCCCTGTGATCTT-GTCGTCATTAGTGTATGAGAAACAGCAACATCTAAGA 1134
Query 1084 ATTATAATGAAAATGCATGGCCTAGGAGATGGTCCTTATTGGATGATTTCCTACGCCTAT 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 ATTATAATGAAAATGCATGGCCTAGGAGATGGTCCTTATTGGATGATTTCCTACGCCTAT 1194
Query 1144 TTTCT-AGCCATATCCACGTTATATATTATATGCTTGATGATATTTGGGTCAGCAATAGG 1202
|| || | |||||||| |||||| |||||||| |||||||||| ||||||||||||||
Sbjct 1195 TTCCTTA-CCATATCCGTGTTATACGTTATATGCCTGATGATATTCGGGTCAGCAATAGG 1253
Score = 278 bits (150), Expect = 3e-73
Identities = 250/298 (84%), Gaps = 8/298 (3%)
Strand=Plus/Plus
Query 2443 GGAATGTATGGTGGATCTTATGTGTTAACAATGACAACATCATCAGAACATGA-AAAAGA 2501
|||| ||| ||||||||||||||||| || ||||||||||| |||||||| || ||| |
Sbjct 2536 GGAAGGTACGGTGGATCTTATGTGTTTACGATGACAACATCTTCAGAACACGAGCAAA-A 2594
Query 2502 TGTGGAGATGTTGGTTCAAGATGTTTCTCCAAACGCCAAGAAGATATATCACATCGCAGG 2561
||||||| | | || ||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2595 CGTGGAGAAGCTAATTAAAGATGTCTCCCCAAACGCCAAGAAGATATATCACATCGCAGG 2654
Query 2562 GACACAAAAATTTGAGATCCCAAAAGAAGAAGTACGGGTCTCGGAAGTGTTTCAGGCGGT 2621
||| || || |||||| | ||||||||||| || ||| |||| || ||||| ||||| ||
Sbjct 2655 GACTCAGAAGTTTGAGCTTCCAAAAGAAGAGGTTCGGATCTCAGAGGTGTTCCAGGCTGT 2714
Query 2622 AGAGAAGGCGAAAAGCAATTTTAGGGTGTTT-GCTTGGGGACTTGCAGACACAACTCTTG 2680
||||||||||| ||||| |||| || ||| ||||||||||| || |||||||||||||
Sbjct 2715 GGAGAAGGCGAAGAGCAACTTTACCGT-TTTCGCTTGGGGACTCGCCGACACAACTCTTG 2773
Query 2681 AAGATGTTTTCATTAAGGTTGCT-AGAA-CTTCTCCGGCCTCTAATGTCTTCTCTTGA 2736
||||||| ||||| ||||||| | |||| | || ||||| ||||||||||||||||
Sbjct 2774 AAGATGTCTTCATCAAGGTTG-TGAGAAACGG-TCAGGCCTTTAATGTCTTCTCTTGA 2829
> AT3G47790.1 | Symbols: ATATH7, ATH7 | ABC2 homolog 7 | chr3:17629530-17633911
FORWARD LENGTH=2960
Length=2960
Score = 128 bits (69), Expect = 3e-28
Identities = 210/275 (76%), Gaps = 22/275 (8%)
Strand=Plus/Plus
Query 2449 TATGGTGGATCTTATGTGTTAACAATGACAACATCATCA-GAACATGAAAAAGATGTGGA 2507
||||| ||||| ||||| || || ||||||| || | |||||||| ||||| || ||
Sbjct 2494 TATGGAGGATCCTATGTATTGACTGTGACAACCTC-GGAGGAACATGAGAAAGAAGTAGA 2552
Query 2508 G-ATGTTGGTTCA-AGATGTTTCTCCAAACGCCAAGAAGATATATC-ACATCGCAGGGAC 2564
| | || || || | | | ||| | || || ||||||||||||| | | ||| |||||
Sbjct 2553 GCA-ATTAGTGCATA-ACATCTCTACGAATGCAAAGAAGATATATCGA-ACCGCGGGGAC 2609
Query 2565 ACAAAAATTTGAGATCCCAAAAG-AAGAAGT-ACGGGTCTCG-GAAGTGTTTCAGGCGGT 2621
|| || |||||| | || |||| |||| || | | | | | || |||||| |||| |
Sbjct 2610 TCAGAAGTTTGAGCTGCC-AAAGCAAGAGGTGA-AGAT-TGGTGAGGTGTTTAAGGCTTT 2666
Query 2622 AGAGAAGGCGAAAAGCAAT-TTTAGGGT-GTTTGCTTGGGGACTTGCAGACACAACTCTT 2679
||||||||||| | |||| ||| || | |||||||||||||||||||||||||||||
Sbjct 2667 GGAGAAGGCGAAGA-CAATGTTTCCAGTAG-TTGCTTGGGGACTTGCAGACACAACTCTT 2724
Query 2680 GAAGATGT-TTTCATTAAGGTTGCT-AGAACTTCT 2712
|||||||| ||| || ||||||||| | |||||||
Sbjct 2725 GAAGATGTCTTT-ATAAAGGTTGCTCA-AACTTCT 2757
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135902248587
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5