BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485210
Length=1647
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48520.1 | Symbols: CYP94B3 | cytochrome P450, family 94, su... 2394 0.0
AT5G63450.1 | Symbols: CYP94B1 | cytochrome P450, family 94, su... 987 0.0
> AT3G48520.1 | Symbols: CYP94B3 | cytochrome P450, family 94,
subfamily B, polypeptide 3 | chr3:17974977-17976670 REVERSE
LENGTH=1694
Length=1694
Score = 2394 bits (1296), Expect = 0.0
Identities = 1537/1654 (93%), Gaps = 13/1654 (1%)
Strand=Plus/Plus
Query 1 ATGGCATATCTTCTGAGTTTTGTGATACTAGCGTTTCTTATAATCATCATCTTCTTTTTA 60
||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 47 ATGGCATTTCTTCTGAGTTTTTTGATACTAGCGTTTCTTATAACCATCATCTTCTTTTTA 106
Query 61 TCTTCATCTTCAACTAAAAAAGTCCAAGAAACCACCACCTATGGACCACCATCGTATCCA 120
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 107 TCTTCATCTTCAACTAAAAAAGTCCAAGAAAACACCACATATGGACCACCATCGTATCCA 166
Query 121 CTCATTGGCTCCATACTCTCCTTCAACAAAAACCGTCACCGTCTTCTCCAATGGTACACC 180
|||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct 167 CTCATTGGCTCCATACTCTCTTTCAACAAAAACCGTCATCGTCTTCTTCAATGGTACACC 226
Query 181 GAACTTCTCCGTATCTCTCCGTATCAAACCATCTTAGTTCCTCTCCTCGGCAACCGTCGC 240
|| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 227 GAGCTTCTCCGTCTCTCTCCGTCTCAAACCATCTTAGTTCCTCTCCTCGGCAACCGTCGC 286
Query 241 ACCATTGTCACAGCAAACCCAGAAAACGTCGAATACATTCTCAGAACAAACTT-TTTCAA 299
||||| ||||| |||||||| ||||||||| |||||||||| ||||||||| ||| ||
Sbjct 287 ACCATCATCACAACAAACCCATTAAACGTCGAGTACATTCTCAAAACAAACTTCTTT-AA 345
Query 300 CTTCCCTAAAGGTAAACCTTTTACCGATCTTCTTGGTGATCTCCTCGGCGGAGGCATTTT 359
|||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||
Sbjct 346 CTTCCCTAAAGGTAAACCTTTTACTGATCTTCTTGGTGATCTTCTCGGTGGAGGCATATT 405
Query 360 CAACGTCGACGGTCACTCATGGAGCTCACAACGTAAACTCGCTAGCCACGAGTTCTCGAC 419
||| ||||||||||||||||||||||| || || ||||||||||||||||||||||| ||
Sbjct 406 CAATGTCGACGGTCACTCATGGAGCTCGCAGCGCAAACTCGCTAGCCACGAGTTCTCCAC 465
Query 420 TCGTTCTCTTAGGAGTTTTGCTTTTGAGGTTCTTAAAGACGAAGTAGAAAACCGTCTCGT 479
||| || |||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct 466 TCGCTCGCTTAGGAGTTTTGCTTTTGAGGTTCTTAAAGACGAAGTGGAGAACCGTCTAG- 524
Query 480 TCCC-GTGCTATCTGCGGCGGCTGATGTTGGCACGACCTTGGATTTGCAAGATGTTTTGA 538
|||| || |||| |||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 525 TCCCGGTTTTATCCACGGCGGCTGATGTTGGTACGACCGTGGATTTGCAAGATGTTTTGA 584
Query 539 AACGTTTTGCTTTTGATGTTGTTTGTAAAGTCTCGTTGGGTTGGGATCCGGATTGTTTGG 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 585 AACGTTTTGCTTTTGATGTTGTTTGTAAAGTCTCGTTGGGTTGGGATCCGGATTGTTTGG 644
Query 599 ATCTAACCCGACCAGTTAATCCTCTTGTGGAGGCTTTTGACACCGCGGCTGAGATTAGTG 658
||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 645 ATCTAACCCGACCCGTTAATCCACTTGTGGAGGCTTTTGACACCGCTGCTGAGATTAGTG 704
Query 659 CTCGCCGTGCTACAGAGCCGGTTTACGCTGTTTGGATGGTGAAGCGTGTGTTGAACGTGG 718
|||||||||| || ||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 705 CTCGCCGTGCCACGGAGCCTATTTACGCTGTTTGGAAAACGAAGCGTGTGTTGAACGTGG 764
Query 719 GAAGCGAGAGGAGGCTAAGAGAAGCGATCAGGACCGTACACGTGTTGGTCTCTGAGATTG 778
|||||||||||| ||| || ||||||||||||||||| ||||||||||||||||||||||
Sbjct 765 GAAGCGAGAGGAAGCTTAGGGAAGCGATCAGGACCGTGCACGTGTTGGTCTCTGAGATTG 824
Query 779 TCAGAGCTAAGAAGAAGAGTCTTGAGATCGGAACTGGAGAAGAAGCGAAGCAAGATCTTT 838
|||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct 825 TCAGAGCTAAGAAGAAGAGTCTTGAGATCGGAACCGGAGCAGAAGCAAAGCAAGATCTTT 884
Query 839 TGTCGAGGTTTCTAGCCGCCGGCCACAACGGTGAAGCAGTGAGGGACATGGTTATTAGTT 898
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 885 TGTCGAGGTTTCTAGCCGCCGGCCACAACGGCGAAGCAGTGAGGGACATGGTTATTAGTT 944
Query 899 TTATCATGGCGGGAAGAGATACGACGTCAGCAGCGATGACGTGGCTGTTTTGGTTGTTGA 958
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 945 TTATCATGGCGGGAAGAGATACAACGTCAGCAGCGATGACGTGGCTGTTTTGGTTGTTGA 1004
Query 959 CTGAGAACGATGACGTGGAGAGGAAGATTTTAGAAGAAGTTGACCCGTTGGTTAGTTTAG 1018
|||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||
Sbjct 1005 CTGAGAACGATGACGTGGAGCGGAAGATTTTAGAAGAAGTGGACCCGTTGGTGAGTTTAG 1064
Query 1019 GGTTAGGGTTTGAGGATTTAAAAGAGATGAATTATACAAAGGCTTGTCTATGTGAAGCCA 1078
||||||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||
Sbjct 1065 GGTTAGGGTTTGAGGATTTGAAAGAGATGGCTTACACGAAGGCTTGTCTATGTGAAGCCA 1124
Query 1079 TGAGGCTTTATCCTCCAGTGTCGTGGGACTCTAAGCATGCTGCAAACGACGACGTTTTAC 1138
||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct 1125 TGAGGCTATATCCTCCAGTTTCGTGGGACTCTAAACATGCTGCAAACGACGACGTTTTGC 1184
Query 1139 CAGACGGGACACGTGTGAAGAGAGGAGACAAGGTGACTTATTTCCCATACGGTATGGGGA 1198
| || ||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1185 CTGATGGGACACGTGTCAAGAGAGGAGACAAAGTGACCTATTTCCCATACGGTATGGGGA 1244
Query 1199 GGATGGAGACGTTATGGGGCACGGATTCAGAAGAGTTTAAACCAAACCGGTGGTTTGATT 1258
||||||||||| ||||||| |||||||||||||||||||| || ||||||||||||||||
Sbjct 1245 GGATGGAGACGCTATGGGGTACGGATTCAGAAGAGTTTAACCCGAACCGGTGGTTTGATT 1304
Query 1259 CTGAACCGGGTAGTACACGACCGGTTTTGAAACCCATTAGTCCTTACAAATTTCCGGTTT 1318
|||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1305 CTGAACCGGGGAGTACACGACCGGTTTTGAAACCTATTAGTCCCTACAAATTTCCGGTTT 1364
Query 1319 TTCAAGCCGGACCGAGGGTTTGTGTAGG-AAAGGAGATGGCGTTTATGCAGATGAAATAC 1377
|||||||||| ||||||||||||||||| |||| ||||||| ||||||||||||||||||
Sbjct 1365 TTCAAGCCGGGCCGAGGGTTTGTGTAGGGAAAG-AGATGGCATTTATGCAGATGAAATAC 1423
Query 1378 GTGGTTGGTTCTGTTTTGAGTCGGTTTGAGATTATACCGGTTAACCTAGACCGGCCGGTT 1437
|| |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||
Sbjct 1424 GTCGTTGGTTCTGTTTTGAGTCGGTTTGAGATTGTGCCGGTTAACAAAGACCGGCCGGTT 1483
Query 1438 TTTGTTCCTCTTTTAACGGCACATATGGCTGGTGGGCTCAAGGTGAAGATCAAGAGAAGA 1497
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1484 TTTGTTCCTCTTTTAACGGCTCATATGGCTGGTGGGCTTAAGGTGAAGATCAAGAGAAGA 1543
Query 1498 AGTCACATCCTTAACAACGTTTAATAGAATATGTAATAATGTAAAACGAGTTATTTATAG 1557
|||||||||||||||||||||||||||||||||||| || | | | |||| |||||
Sbjct 1544 AGTCACATCCTTAACAACGTTTAATAGAATATGTAAAAACG-AGTT--ATTTATATATAG 1600
Query 1558 AATATCAGTGTGGCAATACTCCTGC--G--AAATCAAAATGTGTACATTTGTAAAACATA 1613
||||||||||||||||||||||||| | ||||||| ||| || ||||||||||||||
Sbjct 1601 AATATCAGTGTGGCAATACTCCTGCCTGCGAAATCAATCTGTATAAATTTGTAAAACATA 1660
Query 1614 CCAAAACCGAATATAATCCGGTAATTTTTGGTTC 1647
|||||||||||||||||| ||||| |||||||||
Sbjct 1661 CCAAAACCGAATATAATCAGGTAAGTTTTGGTTC 1694
> AT5G63450.1 | Symbols: CYP94B1 | cytochrome P450, family 94,
subfamily B, polypeptide 1 | chr5:25408895-25410573 REVERSE
LENGTH=1679
Length=1679
Score = 987 bits (534), Expect = 0.0
Identities = 1135/1420 (80%), Gaps = 61/1420 (4%)
Strand=Plus/Plus
Query 110 CATCGTATCC-ACTCATTGGCTCCATACTCTCCTTCAACAAAAACCGTCACCGTCTTCTC 168
||||||| || |||||| ||||| || |||||||||||||||||||| ||||||||||||
Sbjct 170 CATCGTA-CCAACTCATCGGCTCTATTCTCTCCTTCAACAAAAACCGCCACCGTCTTCTC 228
Query 169 CAATGGTACACCGAACTTCTCCGTATCTCTCCGTATCAAACCATCTTAGTTC-CTCTCCT 227
||||||||||| || || |||||| ||||||||| |||||||||| | || ||||||
Sbjct 229 CAATGGTACACAGATCTCCTCCGTCTCTCTCCGTCTCAAACCATCACCG-TCGATCTCCT 287
Query 228 CGGCAACCGTCGCACCATTGTCACAGCAAACCCAGAAAACGTCGAATACATTCTCAGAAC 287
| | ||||| || || |||| |||||||| |||||||| || ||||||||| |||
Sbjct 288 CTTCGGTCGTCGGACTATCATCACTGCAAACCCTGAAAACGTTGAGCACATTCTCAAAAC 347
Query 288 AAACTTTTT-CAACTTCCCTAAAGGTAAACCTTTTACCGATCTTCTTGGTGATCTCCTCG 346
||| ||||| |||||||||||||| |||||||| ||||| || || || ||||| ||||
Sbjct 348 AAA-TTTTTATAACTTCCCTAAAGGCAAACCTTTCACCGACCTCCTAGGAGATCTACTCG 406
Query 347 GCGGAGGCAT-TTTCAACGTC-GACGGTC-ACTCATGGAGCTCACAACGTAAACTCGCTA 403
|||| || || ||| || || ||||| | | | |||||||||||| ||||||||||| |
Sbjct 407 GCGGCGGAATCTTT-AA-TTCTGACGG-CGAGTTATGGAGCTCACAGCGTAAACTCGCGA 463
Query 404 GCCACGAGTTCT-CGACT-CGTTCTCTTA-GGAGTTTTGCTTTTGAGGTTCTTAAAGACG 460
|||||||||| | | | | |||||||||| ||| || |||| || | || || |
Sbjct 464 GCCACGAGTT-TAC-AATGCGTTCTCTTAGGGA-ATTCACTTTCGAAATCCTCCGTGAAG 520
Query 461 AAGTAGAAAACCGTCTCGTTCCCGTGCTAT-CTGCGGCGGCT-GA-TGTTGGCA-CGAC- 515
|||| ||||||| ||| |||| ||||| | || | || | | || || ||| | |||
Sbjct 521 AAGTCCAAAACCGCCTCATTCCGGTGCTTTCCT-CCGCCG-TGGACTG-TGG-AGAGACG 576
Query 516 CTTGGATTTGCAAGATGTTTTGAAACGTTTTGCTTTTGATGTTGTTTGTAAAGTCTCGTT 575
|| ||||| || || |||||||| || |||||||| |||||||| || ||||| |||||
Sbjct 577 GTT-GATTTTCAGGAGGTTTTGAAGCGCTTTGCTTTCGATGTTGTATGCAAAGTGTCGTT 635
Query 576 GGGTTGGGATCCGGATTGTTTGGATCTAACCCGACCAGTTA-ATCCTCTTGTGGAGGCTT 634
||||||||||||||||||||||||| | |||||||| ||| | ||||| ||||||
Sbjct 636 GGGTTGGGATCCGGATTGTTTGGATTTGACCCGACCCGTTCCAGAA-CTTGTTAAGGCTT 694
Query 635 TTGACACCGCGGCTGAGATTAGTGCTCGCCGTGCTACAGAGCCGGTTTACGCTGTTTGGA 694
|||| ||||| ||||| || |||||||| || || |||||||||||||| || ||||
Sbjct 695 TTGATGTAGCGGCGGAGATCAGCGCTCGCCGCGCCACGGAGCCGGTTTACGCCGTGTGGA 754
Query 695 TGGTGAAGCGTGTGTTGAACGT-GGGAAGCGAGAGGAGGCTAAGAGAAGCGATCAGGACC 753
|| |||||| | |||||||| |||| |||||| |||| | |||||||| |||| ||||
Sbjct 755 AAGTAAAGCGTTTCTTGAACGTAGGGA-GCGAGAAGAGGTTGAGAGAAGCCATCAAGACC 813
Query 754 GTACACGTGT-TGGTCTCTGAGATTGTCAGAGCTAAGAAGAAGAGTCTTGAGATCGGAAC 812
|||||| ||| || | |||||||| || | || || ||||| || || || |||||
Sbjct 814 GTACACTTGTCTG-TGTCTGAGATCATCCGGGCCAAAAAGAAAAGCCTCGATATCGG--- 869
Query 813 TGGAGAAGAAG-CG-A-A-GCAAGATCTTTTGTCGAGGTTTCTAGCCGCCGGCCACAACG 868
||| || | | || | | ||| || || ||||||||||||| ||||| |||||| |
Sbjct 870 TGGTGACGT-GTCGGACAAGCAGGACCTGCTGTCGAGGTTTCTCGCCGCTGGCCACGG-G 927
Query 869 GT-GAAGCAGTGAGGGACA-TGGTTATTAGTTTTATCATGGCGGGAAGAGATACGACGTC 926
| ||||| |||||||| | || | || || ||||| ||||||||||| ||||| |||||
Sbjct 928 GAAGAAGCCGTGAGGGATAGTG-TAATCAGCTTTATTATGGCGGGAAGGGATACAACGTC 986
Query 927 AGCAGCGATGACGTGGCTGTTTTGGTTGTTGACTGAGAACGATGACGTGGAGAGGAAGAT 986
||||||||||||||||||||||||||||||| | | || ||||||||||||| ||||||
Sbjct 987 GGCAGCGATGACGTGGCTGTTTTGGTTGTTGAGTCAAAATGATGACGTGGAGACGAAGAT 1046
Query 987 TTTAGAAGAAGTTGACC--CGTTGGTTAGTTTAGGGTTAGGGTTTGAGGATTTAAAAGAG 1044
| || ||| |||| | || | |||||||||||||||||||||||| | ||||
Sbjct 1047 ACTCGACGAA-TTGAGAAACAAAGGGTC-TTTAGGGTTAGGGTTTGAGGATTTGAGAGAG 1104
Query 1045 ATGAATTATACAAAGGCTTGTCTATGTGAAGCCATGAGGCTTTATCCTCCAGTGTCGTGG 1104
|||| ||| ||||| |||||||| |||||||| ||||||||||| || |||||| | |||
Sbjct 1105 ATGAGTTACACAAAAGCTTGTCTGTGTGAAGCAATGAGGCTTTACCCACCAGTGGCTTGG 1164
Query 1105 GACTCTAAGCATGCTGCAAACGACGACGTTTTACCAGACGGGACACGTGTGAAGAGAGG- 1163
||||| |||||||| |||||||||||| |||| ||||| || |||| | | || | |||
Sbjct 1165 GACTCAAAGCATGCAGCAAACGACGACATTTTGCCAGATGGAACACCTCTCAAAA-AGGG 1223
Query 1164 AGACAAGGTGACTTATTTCCCATACGGTATGGGGAGGATGGAGACGTTATGGGGCACGGA 1223
|||||| || ||||||||||| ||||||||||| |||||||||| | | ||||| | ||
Sbjct 1224 AGACAAAGTCACTTATTTCCCTTACGGTATGGGAAGGATGGAGAAGGTGTGGGGTAAAGA 1283
Query 1224 TTCAGAAGAGTTTAAACCAAACCGGTGGTTTGATTCTGAACCGGGT-A-G-TACACGACC 1280
|| || |||||||||||||||||||||||||| |||||| || | | |||| |||
Sbjct 1284 TTGGGACGAGTTTAAACCAAACCGGTGGTTTGAGGAAGAACCGAGTTACGGTACAAAACC 1343
Query 1281 GGTTTTGAAACCCATTAGTCC-TTACAAATTTCCGGTTTTTCAAGCCGGACCGAGGGTTT 1339
|||||||||| | ||| | || ||| ||||||||||| ||||||||||| |||||||
Sbjct 1344 GGTTTTGAAAAGTGTGAGTTCGTT-CAAGTTTCCGGTTTTCCAAGCCGGACCAAGGGTTT 1402
Query 1340 GTGTAGG-AAAGGAGATGGCGTTTATGCAGATGAAATACGTGGTTGGTTCTGTTTTGAGT 1398
| |||| |||| | ||||| |||| || |||||||||||||||||||| |||||||||
Sbjct 1403 GCATAGGTAAAGAA-ATGGCTTTTACACAAATGAAATACGTGGTTGGTTCAGTTTTGAGT 1461
Query 1399 CGGTTTGAGATTATACCGGTTAACC-TAGACCGGCCGGTTTTTGTTCCTCTTTTAACGGC 1457
|||||| |||||||||||||| | || |||||||||| |||||||||||| |||| ||
Sbjct 1462 CGGTTTAAGATTATACCGGTTTGCAATA-ACCGGCCGGTCTTTGTTCCTCTTCTAACCGC 1520
Query 1458 ACATATGGCTGGTGGGCTCAAGGTGAAGATCAAGAGAAGA 1497
|| |||||||||||||| ||||||||||||||||| |||
Sbjct 1521 TCACATGGCTGGTGGGCTAAAGGTGAAGATCAAGAGGAGA 1560
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 81375083445
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5