BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485224
Length=1130
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48690.1 | Symbols: ATCXE12, CXE12 | alpha/beta-Hydrolases s... 1694 0.0
AT3G48700.1 | Symbols: ATCXE13, CXE13 | carboxyesterase 13 | ch... 1007 0.0
> AT3G48690.1 | Symbols: ATCXE12, CXE12 | alpha/beta-Hydrolases
superfamily protein | chr3:18037047-18038234 REVERSE LENGTH=1188
Length=1188
Score = 1694 bits (917), Expect = 0.0
Identities = 1071/1144 (94%), Gaps = 15/1144 (1%)
Strand=Plus/Plus
Query 1 TCACACACACCAATCTTATCATATCTCACCAA-C---CAA-T---CATGGATTCCGAGAT 52
||||||||||||||||||||||| |||||||| | ||| | |||||||||||||||
Sbjct 29 TCACACACACCAATCTTATCATAACTCACCAACCAATCAACTAACCATGGATTCCGAGAT 88
Query 53 CGCCGTCGACTGCTCTCCGTTGCTCAAAATCTACAAAAGTGGCCGCATCGAGCGACTCAT 112
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 89 CGCCGTCGACTGCTCTCCATTGCTCAAAATCTACAAGAGTGGCCGCATCGAGCGACTCAT 148
Query 113 GGGTGAAACCACCGTCCCACCTTCTTCCGACCCACAAAACGGCGTCGTCTCCAAAGATGT 172
||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||| || ||
Sbjct 149 GGGTGAAGCCACCGTCCCACCTTCTTCCGAACCACAAAACGGAGTCGTTTCCAAGGACGT 208
Query 173 CGTTTACTCTCCCGACAACAACCTCTCCGTCCGCATTTACCTCCCGGAGAAA---GCCGC 229
||||| ||| ||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct 209 TGTTTATTCTGCCGACAACAACCTATCCGTCCGTATTTACCTCCCGGAGAAAGCCGCCGC 268
Query 230 CGAGAACG-GTGAGAAACTCCCTCTCCTCGTTTACTTCCACGGAGGAGGATTCATCATTG 288
||||| || | |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 269 CGAGACCGACT-CGAAACTCCCTCTCCTCGTTTACTTCCACGGTGGAGGATTCATCATTG 327
Query 289 AGACCGCTTTCTCTCCGACTTACCACACTTTCCTCACGGCGGCTGTCTCTGCTTCGAACT 348
|||| ||||||||||| ||||||||||||||||||||| || |||||||||| |||||||
Sbjct 328 AGACAGCTTTCTCTCCAACTTACCACACTTTCCTCACGACGTCTGTCTCTGCGTCGAACT 387
Query 349 GTGTAGCGGTCTCTGTTGATTACCGGCGTACACCGGAGCATCCGATCTCCGTCCCGTTTG 408
||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |
Sbjct 388 GTGTAGCGGTCTCTGTTGATTACCGTCGTGCACCGGAGCATCCGATCTCCGTCCCGTTCG 447
Query 409 ATGATTCTTGGACAGCTCTCAAGTGGGTATTTACCCATATCACCGGATCTGGTCAAGAAG 468
|||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 448 ATGATTCTTGGACAGCTCTCAAATGGGTATTCACCCATATCACTGGATCTGGTCAAGAAG 507
Query 469 CTTGGTTAAACAAACATGCTGACTTCAGCAAAGTGTTTCTCTCCGGAGACAGTGCAGGAG 528
||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 508 ATTGGTTAAACAAACATGCTGACTTCAGCAGAGTGTTCCTCTCCGGAGACAGTGCAGGAG 567
Query 529 CAAACATCGTGCATCACATGGCGATGAGAGCTGCGAAAGAGAAACTCAGTCCTGATTTGA 588
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 568 CAAACATCGTGCATCACATGGCGATGAGAGCTGCGAAAGAGAAACTCAGTCCTGGTTTGA 627
Query 589 ACGATACAGGAATCTCTGGAATCATCTTGGTTCATCCTTACTTCTGGTCGAAAACACCAA 648
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 628 ACGATACAGGAATCTCTGGAATCATCTTGCTTCATCCTTACTTCTGGTCGAAAACACCAA 687
Query 649 TCGACGAGAAGGACACGAAGGATGAAACCATGAGGATGAAGATAGAGGCGTTTTGGATGA 708
||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 688 TCGACGAGAAGGATACGAAAGATGAAACGTTGAGGATGAAGATAGAGGCGTTTTGGATGA 747
Query 709 TGGCTAGTCCCAATAGCAAAGATGGATCAGATGATCCGTTGCTCAACGTGGTGCAATCAG 768
|||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 748 TGGCAAGTCCTAATAGCAAAGATGGAACAGATGATCCGTTGCTCAACGTGGTGCAATCAG 807
Query 769 AGTCGGTGGATTTGTCAGGGTTGGGTTGTGGTAAGGTTTTGGTAATGGTGGCTGAGAAAG 828
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 808 AGTCGGTGGATTTGTCTGGGTTGGGTTGTGGTAAGGTTTTGGTAATGGTGGCTGAGAAAG 867
Query 829 ATGCGTTGGTGAGGCAAGGTTGGGGTTACGCGGCGAAGCTTGAGAAGTGTGGTTGGAAAG 888
|||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 868 ATGCGTTGGTGAGGCAGGGTTGGGGTTACGCGGCTAAGCTTGAGAAGTCTGGTTGGAAAG 927
Query 889 GAGAGGTTCAAGTGGTGGAGAGTGAAGGAGAAGATCATGTTTTTCATTTGTTGAAACCTG 948
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 GAGAGGTTGAAGTGGTGGAGAGTGAAGGAGAAGATCATGTTTTTCATTTGTTGAAACCTG 987
Query 949 ATTGTGATAATGCTATTGAAGCCATGCATAAATTCTCAGGGTTTATTAAGGGAGAGAACT 1008
| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 988 AATGTGATAATGCTATTGAAGTCATGCATAAATTCTCAGGGTTTATTAAGGGAGGGAACT 1047
Query 1009 AGCTTTGTGCTCTATAGA--TATTGGAATAATTTGGTACTACATGTCTCAGTTGCGTCTC 1066
||||||||||||| |||| |||||||||||||||||||||||| | | |||||||||||
Sbjct 1048 AGCTTTGTGCTCTCTAGAGATATTGGAATAATTTGGTACTACATATTTTAGTTGCGTCTC 1107
Query 1067 TCAGTTTCTGTAATGTTTCAGTGATTAGCATTTCGGCTAAAGCAACACAATAAACATTGA 1126
|||||||||||||||||||||||||| || ||||| | |||||||||||||||| |||||
Sbjct 1108 TCAGTTTCTGTAATGTTTCAGTGATTGGCTTTTCGCCCAAAGCAACACAATAAAAATTGA 1167
Query 1127 AGAT 1130
||||
Sbjct 1168 AGAT 1171
> AT3G48700.1 | Symbols: ATCXE13, CXE13 | carboxyesterase 13 |
chr3:18038648-18039876 REVERSE LENGTH=1229
Length=1229
Score = 1007 bits (545), Expect = 0.0
Identities = 892/1052 (85%), Gaps = 54/1052 (5%)
Strand=Plus/Plus
Query 4 CACACACCAATCTTATCATATCTC-A-C-CAACCAATC-ATGGATTCCGAGATCGCCGTC 59
|||||| ||||| || | | |||| | | ||||||| | ||||||||||||||||||| |
Sbjct 28 CACACA-CAATCATA-C-TCTCTCAATCTCAACCAA-CGATGGATTCCGAGATCGCCGCC 83
Query 60 GACTGCTCTCCGTTGCTCAAAATCTACAAAAGTGGCCGCATCGAGCGACTCATGGGTGAA 119
|||| |||||| |||||| ||||||||| ||||||||||| ||||||||| ||||||||
Sbjct 84 GACTACTCTCCAATGCTCATAATCTACAAGAGTGGCCGCATTGAGCGACTCGTGGGTGAA 143
Query 120 ACCACCGTCCCACCTTCTTCCGACCCACAAAACGGCGTCGTCTCCAAAGATGTCGTTTAC 179
|||||||| |||||||||||| ||||||||||||| ||||| ||||| || ||||||||
Sbjct 144 ACCACCGTGCCACCTTCTTCCAACCCACAAAACGGAGTCGTTTCCAAGGACGTCGTTTAT 203
Query 180 TCTCCCGACAACAACCTCTCCGTCCGCATTTACCTCCCGGAGAAA---G---CCGCCGAG 233
||||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||
Sbjct 204 TCTCCTGACAACAACCTCTCCCTCCGCATTTACCTCCCGGAGAAAGCCGCCACCGCCGAG 263
Query 234 AACG--G----TG-AGAAACTCCCTCTCCTCGTTTACTTCCACGGAGGAGGATTCATCAT 286
| || | || | ||||||||||||||||| ||||||||||| ||||||||| || |
Sbjct 264 ACCGAAGCCTCTGTA-AAACTCCCTCTCCTCGTCTACTTCCACGGCGGAGGATTCCTCGT 322
Query 287 TGAGACCGCTTTCTCTCCGACTTACCACACTTTCCTCACGGCGGCTGTCTCTGCTTCGA- 345
||| ||||||||||| ||||||||||||||||||||||||||||||||||| || || |
Sbjct 323 TGAAACCGCTTTCTCCCCGACTTACCACACTTTCCTCACGGCGGCTGTCTCAGCGTC-AG 381
Query 346 ACTGTGTAGCGGTCTCTGTTGATTACCGGCGTACACCGGAGCATCCGATCTCCGTCCCGT 405
|||||||||||||||| || |||||||| ||| |||||||||||||||| ||| | | |
Sbjct 382 ACTGTGTAGCGGTCTCCGTGGATTACCGACGTGCACCGGAGCATCCGAT-TCC-T-ACTT 438
Query 406 -TT--GATGATTCTTGGACAGCTCTCAAGTGGGTATTT-ACCCATATCACCGGATCTGG- 460
|| ||||||||||||||||||||||| ||||| ||| |||| ||| ||||||||||
Sbjct 439 CTTACGATGATTCTTGGACAGCTCTCAAATGGGT-TTTCTCCCACATCGCCGGATCTGGC 497
Query 461 TCAAGAAGCTTGGTTAAACAAACATGCTGACTTCAGCAAAGTGTTTCTCTCCGGAGACAG 520
|| ||||| |||||| |||||||| || ||||||||||||||||| ||| ||||||| ||
Sbjct 498 TC-AGAAGATTGGTTGAACAAACACGCCGACTTCAGCAAAGTGTTCCTCGCCGGAGATAG 556
Query 521 TGCAGGAGCAAACATCGTGCATCACATGGCGATGAGAGCTGCGAAAGAGAAACTCAGTCC 580
|| ||||| ||||| |||||||||| |||||| |||||||||||| |||||||||||
Sbjct 557 CGCCGGAGCGAACATAACGCATCACATGACGATGAAAGCTGCGAAAGATAAACTCAGTCC 616
Query 581 TGA---TTTGAACGA-TACAGGAATCTCTGGAATCATCTTGGTTCATCCTTACTTCTGGT 636
|| ||||||||| | |||||||||||||||||||||| ||||||||||| |||||||
Sbjct 617 CGAGTCTTTGAACGAGT-CAGGAATCTCTGGAATCATCTTAGTTCATCCTTATTTCTGGT 675
Query 637 CGAAAACACCAATCGACGAGAAGGACACGAAGGATGAAACCATGAGGATGAAGATAGAGG 696
| ||||| ||| ||||||| ||||| |||| ||||| | | || |||| | ||| |||
Sbjct 676 CAAAAACCCCAGTCGACGACAAGGAGACGACGGATGTAGCAATAAGGACGTGGATCGAGT 735
Query 697 CGTTTTGGATGATGGCTAGTCCCAATAGCAAAGATGGATCAGATGATCCGTTGC-TCAAC 755
|| | |||| | ||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct 736 CGGTCTGGACGTTGGCTAGTCCCAATAGCAAAGATGGATCAGATGATCCATT-CATCAAC 794
Query 756 GTGGTGCAATCAGAGTCGGTGGATTTGTCAGGGTTGGGTTGTGGTAAGGTTTTGGTAATG 815
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 795 GTGGTGCAATCAGAGTCGGTGGATTTGTCCGGGTTGGGTTGTGGTAAGGTTTTGGTAATG 854
Query 816 GTGGCTGAGAAAGATGCGTTGGTGAGGCAAGGTTGGGGTTAC-GCGGCGAAGCTTGAG-A 873
|||||||||||||| ||||||||||||||||||||||||||| | || |||||||| | |
Sbjct 855 GTGGCTGAGAAAGACGCGTTGGTGAGGCAAGGTTGGGGTTACTG-GGAGAAGCTTG-GTA 912
Query 874 AGTGTGGTTGGAAAGGAGAGGTTCA--A-GTGGTGGAGAGTGAAGG-AGAAGATCATGTT 929
|| | ||||||| ||||| || | | |||||||||| | |||| ||||| |||||||
Sbjct 913 AGAGCCGTTGGAACGGAGAAGTACTGGACGTGGTGGAGACT-AAGGGAGAAGGTCATGTT 971
Query 930 TTTCATTTGTTGAAACCTGATTGTGATAATGCT-ATTGAAGC-CATGCATAAATTCTCAG 987
||||||||| | | ||| ||| ||| || ||| || ||| | | |||| | |||| |||
Sbjct 972 TTTCATTTGAGGGATCCTAATTCTGAAAAGGCTCAT-GAA-CTCGTGCACAGATTCGCAG 1029
Query 988 GGTTTATTAAGGGAGAGAACTAGCTTTGTGCT 1019
||||||| |||||||| || || | |||||||
Sbjct 1030 GGTTTATCAAGGGAGACAAGTAACATTGTGCT 1061
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55421401680
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5