BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485232
Length=1875
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransfera... 2737 0.0
AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981641-7... 1683 0.0
AT3G48790.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent t... 1225 0.0
> AT3G48780.1 | Symbols: ATSPT1, SPT1 | serine palmitoyltransferase
1 | chr3:18089061-18093088 FORWARD LENGTH=2420
Length=2420
Score = 2737 bits (1482), Expect = 0.0
Identities = 1716/1822 (94%), Gaps = 43/1822 (2%)
Strand=Plus/Plus
Query 1 TTCTTCGACGAAAGGGGAAGA-G--GTTGAATTCAAAAtctctctctcttcttctctgtc 57
||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||||
Sbjct 105 TTCTTCGACGAAAGGGGAAGAGGTTGTTGAATTCAAAA--TCTCTCTC-TCTTCTCTGTC 161
Query 58 tcttctcGCGTGAGAGAAG-CGTAGAATTTTCCAGATCTCATCATTG-AATTC--A---A 110
|| ||||||||||| || | ||| |||||||||||||| ||||| ||||| | |
Sbjct 162 TC-TCTCGCGTGAG-CTAGTTGCAGATTTTTCCAGATCTCAACATTGAAATTCAAACTCA 219
Query 111 AA-CT-----------CA-A-AGCTAG--AGA---AGAAGAAGAAGACG-AGACGGAGCT 150
|| || | | || ||| ||| |||||||||||||| | ||||||||
Sbjct 220 AAGCTAGAGAGGGAGAGAGATAGATAGATAGAGGGAGAAGAAGAAGACGAACACGGAGCT 279
Query 151 GAAACAATGATTACGATCCCATACCTTACCGCTGTATCAACGTATTTCAGCTACGGTTTG 210
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 280 GAAACAATGATTACGATCCCATACCTTACCGCTGTATCAACGTATTTCAGCTACGGCTTG 339
Query 211 CTCTTCGCCTTTGGTCAGCTTCGCGATTACTCCCGCCTAATCTTCGATTGGTGGCGCACC 270
|| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 340 CTTTTCGCGTTTGGTCAGCTTCGCGATTACTCTCGCCTAATCTTCGATTGGTGGCGCACC 399
Query 271 AACAATCTCCAGGGATACGCGCCGATCTGCTTGGCGCATGAGGATTTCTACATCAGACGA 330
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 400 AACAATCTCCAGGGATACGCTCCGATCTGCTTGGCGCATGAGGATTTCTACATCCGACGA 459
Query 331 TTGTATCATCGGATTCAGGACTGTTTTGGACGTCCCATATCAAGTGCACCTGATGCCTGG 390
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 460 TTGTATCATCGGATTCAGGACTGTTTTGGACGTCCCATTTCAAGTGCACCTGATGCTTGG 519
Query 391 ATTGATGTGGTTGAGAGAGTTTCTGACGATAACAACAAGACGCTAAAGCGAACTACAAAG 450
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 520 ATTGATGTGGTTGAGAGAGTCTCTGACGATAACAACAAGACGTTAAAGCGAACTACAAAG 579
Query 451 ACTAGTAGGTGCCTTAATCTGGGGTCCTACAATTATCTTGGATTTGGTTCTTTTGATGAA 510
||||| |||||||||||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct 580 ACTAGCAGGTGCCTTAATTTGGGTTCCTACAATTATCTTGGATTTGGTTCTTTCGATGAA 639
Query 511 TATTGTACGCCTCGTGTTATTGAGTCTTTGAAGAAATTTTCAGCTAGTACATGTAGCTCT 570
||||| ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||
Sbjct 640 TATTGCACGCCTCGTGTCATTGAGTCTCTGAAGAAATTTTCAGCAAGTACATGTAGCTCT 699
Query 571 CGCGTTGATGCAGGAACTACATCTGTGCATGCAGAACTTGAGGAATGTGTTGCTAAATAT 630
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 700 CGCGTTGATGCAGGAACTACATCTGTGCATGCAGAACTTGAGGATTGTGTTGCTAAATAT 759
Query 631 GTCGGACAACCTGCTGCTGTTGTCTTTGGCATGGGCTATGCAACAAACTCGGCTATTATT 690
||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||
Sbjct 760 GTCGGACAACCTGCTGCTGTTATTTTTGGCATGGGTTATGCAACAAACTCGGCTATCATT 819
Query 691 CCCGTCTTGATTGGAAAGGGAGGGTTGATAATAAGCGATTCTTTGAACCATACTTCAATT 750
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 820 CCCGTCTTGATTGGAAAGGGAGGGTTGATAATAAGCGATTCTTTGAACCATACTTCGATT 879
Query 751 GTCAACGGCGCTCGTGGTTCAGGAGCTACTATCCGTGTTTTCCAACACAACACACCTGCT 810
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 880 GTCAACGGCGCTCGAGGTTCAGGAGCTACTATCCGTGTTTTCCAACACAACACACCTGGT 939
Query 811 CATCTGGAAAAAGTATTGAAAGAACAAATCGCTGAGGGACAACCCAGGACGCATAGACCG 870
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 940 CATCTGGAAAAAGTATTGAAAGAACAAATCGCCGAGGGACAACCCAGGACGCATAGACCG 999
Query 871 TGGAAGAAAATTATTGTTGTTGTTGAGGGTATTTACAGCATGGAAGGGGAAATTTGTCAT 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 TGGAAGAAAATTATTGTTGTTGTTGAGGGTATTTACAGCATGGAAGGGGAAATTTGTCAT 1059
Query 931 CTGCCCGAGATTGTCTCAATATGCAAGAAGTATAAGGCATATGTTTACTTGGACGAAGCT 990
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1060 CTGCCCGAGATTGTTTCAATATGCAAGAAGTATAAGGCATATGTTTACTTGGACGAAGCT 1119
Query 991 CACAGCATTGGAGCAATTGGCAAGACAGGAAGGGGTGTTTGTGAACTCCTGGGGGTTGAC 1050
|||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 1120 CACAGCATTGGAGCAATTGGCAAGACAGGAAGAGGTGTTTGTGAACTCCTTGGAGTTGAC 1179
Query 1051 ACTGCTGATGTGGACATAATGATGGGAACTTTCACGAAATCTTTTGGGTCTTGTGGTGGC 1110
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1180 ACTTCTGATGTGGACATAATGATGGGAACTTTCACGAAATCTTTTGGGTCTTGTGGTGGC 1239
Query 1111 TATATTGCCGGATCAAAGGACCTCATCCAATATTTGAAGCACCAATGCCCGGCTCACCTT 1170
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 TATATTGCGGGATCAAAGGACCTCATCCAATATTTGAAGCACCAATGCCCGGCTCACCTT 1299
Query 1171 TACGCAACGTCAATTTCAACTCCTTCCGCGACACAAATCATATCGGCGATAAAGGTTATC 1230
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 TACGCCACATCAATTTCAACTCCTTCCGCGACACAAATCATATCGGCGATAAAGGTTATC 1359
Query 1231 CTTGGAGAGGACGGTTCAAACAGAGGGGCACAAAAGTTAGCAAGAATAAGGGAGAACAGC 1290
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 CTTGGAGAGGATGGTTCAAACAGAGGGGCACAAAAGTTAGCAAGAATAAGGGAGAACAGC 1419
Query 1291 AACTTTTTCAGGGCTGAGTTGCAGAAGATGGGGTTTGAGGTTCTTGGAGACAATGATTCC 1350
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1420 AACTTTTTCAGGGCTGAGTTGCAGAAGATGGGGTTTGAAGTTCTTGGAGACAATGATTCA 1479
Query 1351 CCAGTCATGCCAATAATGCTTTACAATCCAGCAAAAATTCCAGCCTTCTCAAGGGAATGT 1410
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1480 CCAGTCATGCCAATAATGCTTTACAATCCAGCAAAAATTCCAGCATTCTCAAGGGAATGT 1539
Query 1411 TTGCGAGAAAACTTGGCAGTTGTGGTCGTCGGTTTCCCAGCTACACCGCTATTGCTAGCC 1470
||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||
Sbjct 1540 TTGCGAGAAAACTTGGCGGTGGTGGTCGTCGGTTTCCCAGCTACACCCCTATTGCTAGCC 1599
Query 1471 AGGGCTCGTATTTGCATATCCGCATCTCACTCAAGAGAAGATCTTATTAAAGCCCTACAG 1530
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1600 AGGGCTCGTATTTGCATATCCGCATCTCACTCAAGAGAAGATCTTATAAAAGCCCTACAG 1659
Query 1531 GTTATAAGCAAAGCAGGTGACCTTACCGGGATCAAATATTTTCCGGCTGCTCCAAAGAAG 1590
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1660 GTTATAAGCAAAGCAGGTGACCTTACCGGGATCAAATATTTTCCGGCAGCTCCAAAAAAG 1719
Query 1591 CAAGAAGTAGAGAAAAATGGCATCAAATTGGATTAAAACCGCAATGCATCAGTTTCTTTC 1650
||||||||||||||||||||||||||||||||||||| ||| || ||| |||||||||||
Sbjct 1720 CAAGAAGTAGAGAAAAATGGCATCAAATTGGATTAAACCCGTAAGGCAACAGTTTCTTTC 1779
Query 1651 CAAGAGATGTTTGGTTAGCAATTAGCAT-TAGTATACAATT-TCCTCGCTGTTCGTCTTT 1708
|||||||||||||| ||||||||||| | |||| ||||||| || |||||||||||||||
Sbjct 1780 CAAGAGATGTTTGGCTAGCAATTAGC-TGTAGTGTACAATTATC-TCGCTGTTCGTCTTT 1837
Query 1709 GTCTTGTCGTGAAACATGTGATTGTTGTCATTCTTCTTTCTTTAttttttttttAATTGG 1768
||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||
Sbjct 1838 GTCTTGTCGTGAAACATGTGATTGTTGTCATTCTTCTCTCTTTATTATTTTT--A-TTGT 1894
Query 1769 TTTTGTCAGAGTTAATA-TTGT 1789
||||||||||||||||| ||||
Sbjct 1895 TTTTGTCAGAGTTAATAATTGT 1916
Score = 76.8 bits (41), Expect = 7e-13
Identities = 45/47 (96%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 1829 GAATTGTTTTGTTTTGGTCTTCCAGACCACGAATATGCCAGCAGAAG 1875
|||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 2030 GAATTGTTTTGTTTTGGTCTTCCAGACCACGAATGTGCTAGCAGAAG 2076
> AT5G23670.1 | Symbols: LCB2 | long chain base2 | chr5:7981641-7985391
FORWARD LENGTH=2072
Length=2072
Score = 1683 bits (911), Expect = 0.0
Identities = 1297/1483 (87%), Gaps = 28/1483 (2%)
Strand=Plus/Plus
Query 156 AATGATTACGATCCCATACCTT-ACCGCTGTATCAACGTATTTCAGCTACGGTTTGCTCT 214
|||||| ||||| || || || ||||||||||| || || |||||||| || |||||||
Sbjct 248 AATGATAACGATTCCTTA-TTTAACCGCTGTATCCACCTACTTCAGCTATGGATTGCTCT 306
Query 215 TCGCCTTTGGTCAGCTTCGCGATTACTCCCG-C-CTAATC-TTCGATTGGTGGCGCACCA 271
| || ||||||||||| || |||| || ||| | || || || ||||||||| ||| |
Sbjct 307 TTGCTTTTGGTCAGCTCCGAGATTTCTTCCGTCGCT--TCATT-GATTGGTGGTTCACTA 363
Query 272 ACAATCTCCAGGGATACGCGCCGATCTGCTTGGCGCATGAGGATTTCTACATCAGACGAT 331
||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| ||||
Sbjct 364 GCAATCTCCAGGGATACGCGCCGATCTGTTTGGGGCATGAGGATTTCTATATCAGGCGAT 423
Query 332 TGTATCATCGGATTCAGGACTGTTTTGGACGTCCCATATCAAGTGCACCTGATGCCTGGA 391
||||||||||||||||||| ||||||| ||| || ||||| |||||||||||||| |||
Sbjct 424 TGTATCATCGGATTCAGGATTGTTTTGAACGACCTATATCGAGTGCACCTGATGCTTGGT 483
Query 392 TTGATGTGGTTGAGAGAGT-TTCTGACGATAACAACAAGACGCTAAAGCGAACTACAAAG 450
|||||||||||||| | | ||| | || |||||||||||||| |||||||| |||||
Sbjct 484 TTGATGTGGTTGAGCG-CTACTCTAATGACAACAACAAGACGCTTAAGCGAACAACAAAA 542
Query 451 ACTAGTAGGTGCCTTAATCTGGGGTCCTACAATTATCTTGGATTTGGTTCTTTTGATGAA 510
||||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 543 ACTAGCAGGTGCCTCAATTTGGGGTCCTACAATTATCTTGGGTTTGGTTCTTTTGATGAA 602
Query 511 TATTGTACGCCTCGTGTTATTGAGTCTTTGAAGAAATTTTCAGCTAGTACATGTAGCTCT 570
||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 603 TATTGCACGCCTCGTGTTATTGAGTCCTTGAAGAAATTTTCAGCAAGTACATGTAGCTCT 662
Query 571 CGCGTTGATGCAGGAACTACATCTGTGCATGCAGAACTTGAGGAATGTGTTGCTAAATAT 630
|| |||||||||||||||||||| ||||||||||||||||||||||||||| ||| | |
Sbjct 663 CGTGTTGATGCAGGAACTACATCCGTGCATGCAGAACTTGAGGAATGTGTTACTAGGTTT 722
Query 631 GTCGGACAA-CCTGCTGCTGTTGTCTTTGGCATGGGCTATGCAACAAACTCGGCTATTAT 689
|| ||| || |||||||||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 723 GTGGGA-AAGCCTGCTGCTGTTGTTTTTGGCATGGGCTATGCAACAAATTCGGCTATCAT 781
Query 690 TCCCGTCTTGATTGGAAAGGGAGGGTTGATAATAAGCGATTCTTTGAACCATACTTCAAT 749
||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||
Sbjct 782 TCCAGTCTTGATTGGAAAGGGAGGGTTGATAATAAGTGATTCTTTGAACCATAGTTCTAT 841
Query 750 TGTCAACGGCGCTCGTGGTTCAGGAGCTACTATCCGTGTTTTCCAACACAACACACCTGC 809
|||||| || ||||| ||||| ||||| ||||||||||||||||| || ||||| ||| |
Sbjct 842 TGTCAATGGTGCTCGAGGTTCTGGAGCCACTATCCGTGTTTTCCAGCATAACACGCCTTC 901
Query 810 TCATCTGGAAAAAGTATTGAAAGAACAAATCGCTGAGGGACAACCCAGGACGCATAGACC 869
||| ||||| ||| |||| ||||||||| || || || ||||| ||||| ||| ||||
Sbjct 902 CCATTTGGAACGAGTTTTGAGAGAACAAATTGCAGAAGGTCAACCTAGGACACATCGACC 961
Query 870 GTGGAAGAAAATTATTGTTGTTGTTGAGGGTATTTACAGCATGGAAGGGGAAATTTGTCA 929
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 962 ATGGAAGAAAATTATTGTTGTTGTTGAAGGTATTTACAGCATGGAAGGGGAGATTTGTCA 1021
Query 930 TCTGCCCGA-GATTGTCTCAATATGCAAGAAGTATAAGGCATATGTTTACTTGGACGAAG 988
||| || || | |||| | ||||||||||||||||||||||||||||| ||||| ||||
Sbjct 1022 TCTACCGGAAG-TTGTGGCCATATGCAAGAAGTATAAGGCATATGTTTATTTGGATGAAG 1080
Query 989 CTCACAGCATTGGAGCAATTGGCAAGACAGGAAGGGGTGTTTGTGAACTCCTGGGGGTTG 1048
||||||||||||| |||||||| || ||||||| |||| |||||||||||||||| ||||
Sbjct 1081 CTCACAGCATTGGGGCAATTGGTAAAACAGGAAAGGGTATTTGTGAACTCCTGGGAGTTG 1140
Query 1049 ACACTGCTGATGTGGACATAATGATGGGAACTTTCACGAAATCTTTTGGGTCTTGTGGTG 1108
|||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1141 ACACAGCTGATGTGGACGTAATGATGGGAACCTTCACAAAATCTTTTGGGTCTTGTGGTG 1200
Query 1109 GCTATATTGCCGGATCAAAGGACCTCATCCAATATTTGAAGCACCAATGCCCGGCTCACC 1168
|||||||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||| |
Sbjct 1201 GCTATATTGCTGGATCTAAGGAGCTCATCCAATATTTGAAGCATCAATGCCCAGCTCATC 1260
Query 1169 TTTACGCAACGTCAATTTCAACTCCTTCCGCGACA-CAAATCATATCGGCGAT-AAAGGT 1226
|||||||||| || || ||||||||||||| ||| ||||| ||||| || || |||| |
Sbjct 1261 TTTACGCAACATCCATACCAACTCCTTCCGC-ACAACAAATTATATCTGCCATTAAAG-T 1318
Query 1227 TATCCTTGGAGAGGACGGTTCAAA-CAGAGGGGCACAAAAGTTAGCAAGAATAAGGGAGA 1285
||| || |||||||| |||||||| | |||||||||||||| ||||||||||| | ||||
Sbjct 1319 TATTCTGGGAGAGGATGGTTCAAATC-GAGGGGCACAAAAGCTAGCAAGAATACGTGAGA 1377
Query 1286 ACAGCAACTTTTTCAGGGCTGAGTTGCAGAAGATGGGGTTTGAGGTTCTTGGAGACAATG 1345
|||||||||||||| |||||||| ||||||||||||| |||||||| |||||||||||||
Sbjct 1378 ACAGCAACTTTTTCCGGGCTGAGCTGCAGAAGATGGGATTTGAGGTACTTGGAGACAATG 1437
Query 1346 ATTCCCCAGTCATGCCAATAATGCTTTACAATCCAGCAAAAATTCCAGCCTTCTCAAGGG 1405
|||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||| |
Sbjct 1438 ATTCCCCAGTCATGCCTATAATGCTTTACAACCCAGCAAAAATCCCAGCTTTCTCAAGAG 1497
Query 1406 AATGTTTGCGAGAAAACTTGGCAGTTGTGGTCGTCGGTTTCCCAGCTACACCGCTATTGC 1465
||||| ||||| |||| ||||||| |||||||| ||||||||||||||||| ||| |||
Sbjct 1498 AATGTCTGCGACAAAAAGTGGCAGTGGTGGTCGTGGGTTTCCCAGCTACACCTCTACTGC 1557
Query 1466 TAGCCAGGGCTCGTATTTGCATATCCGCATCTCACTCAAGAGAAGATCTTATTAA-AGCC 1524
| || ||||| ||||||||||| ||||||||||| ||||||||||||||||| || ||||
Sbjct 1558 TGGCTAGGGCACGTATTTGCATCTCCGCATCTCATTCAAGAGAAGATCTTAT-AAGAGCC 1616
Query 1525 CTACA-GGTTATAAGCAAAGCAGGTGACCTTACCGGGATCAAATATTTTCCGGCTGCTCC 1583
|| || |||||||||||||| ||||||||||| ||| ||||||||||| ||||| | ||
Sbjct 1617 CT-CAAGGTTATAAGCAAAGTAGGTGACCTTAGCGGAATCAAATATTTCCCGGCAGAGCC 1675
Query 1584 AAAGAAGCA-AGAAGTAGA-GAAAAATGGCATCAAATTGGATT 1624
||||| | |||| || |||||| | |||||| ||||||
Sbjct 1676 GAAGAAA-ATAGAAC-AGTCGAAAAACGACATCAAGCTGGATT 1716
> AT3G48790.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein | chr3:18093404-18095181 FORWARD
LENGTH=1053
Length=1053
Score = 1225 bits (663), Expect = 0.0
Identities = 918/1037 (89%), Gaps = 34/1037 (3%)
Strand=Plus/Plus
Query 581 CAGGAACTACATCTGTGCATGCAGAACTTGAGGAATGTGTTGCTAAATATGTCGGACAAC 640
||||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||| |||
Sbjct 17 CAGGAACTACAGCTGTGCATGGAGAACTTGAGGAATGTGTTGCTAAATTTGTGGGAAAAC 76
Query 641 CTGCTGCTGTTGTCTTTGGCATGGGCTA-TGCAACAAACTCGGCTATTATTCCCGTCTTG 699
||||||||||||| |||||||||||||| | ||||||||||||||| ||| | ||||||
Sbjct 77 CTGCTGCTGTTGTTTTTGGCATGGGCTACT-TAACAAACTCGGCTATCATTTCTGTCTTG 135
Query 700 ATTGGAAAGGGAGGGTTGATAATAAGCGATTCTTTGAACCATACTTCAATTGTCAACGGC 759
||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 136 ATTGGCAAGGGAGGGTTGATAATAAGTGATTCTTTGAACCATACTTCAATTATCAATGGT 195
Query 760 GCTCGTGGTTCAGGAGCTACTATCCGTGTTTTCCAACACAACACACCTGCTCATCTGGAA 819
||||| ||||||||||| |||||||| ||||| | ||||||| | |
Sbjct 196 GCTCGAGGTTCAGGAGCCACTATCCGCGTTTT----C-CAACACA-------A-C----- 237
Query 820 AAAGTATTGAAAGAACAAATCGCTGAGGGACAACCCAGGACGCATAGACCGTGGAAGAAA 879
| ||||||||||||| ||| |||||||||||| ||||| || |||||||||||||||
Sbjct 238 --A-TATTGAAAGAACATATCATTGAGGGACAACCAAGGACACACAGACCGTGGAAGAAA 294
Query 880 ATTATTGTTGTTGTTGAGGGTATTTACAGCATGGAAGGGGAAATTTGTCATCTGCCCGAG 939
||||| ||||||||||| |||||||| ||||||||||||||||| ||| |||| || |||
Sbjct 295 ATTATCGTTGTTGTTGAAGGTATTTATAGCATGGAAGGGGAAATCTGTGATCTACCGGAG 354
Query 940 ATTGTCTCAATATGCAAG-AAGTATAAGGCATATGTTTACTTGGACGAAGCTCACAGCAT 998
||||| ||| ||||| || ||||||||||||||||||| |||||||||||||| |||||
Sbjct 355 ATTGTTTCAGTATGC-AGTGAGTATAAGGCATATGTTTATTTGGACGAAGCTCATAGCAT 413
Query 999 TGGAGCAATTGGCAAGACAGGAAGGGGTGTTTGTGAACTCCTGGGGGTTGACACTGCTGA 1058
||||||||||||||| |||||| | ||||||||||||||||| || ||||||||| ||||
Sbjct 414 TGGAGCAATTGGCAAAACAGGACGAGGTGTTTGTGAACTCCTAGGAGTTGACACTACTGA 473
Query 1059 TGTGGACATAATGATGGGAACTTTCACGAAATCTTTTGGGTCTTGTGGTGGCTATATTGC 1118
|||||||| |||||||| ||||||||||||||| | ||||||||||||||||| |||||
Sbjct 474 AGTGGACATTATGATGGGCACTTTCACGAAATCTCTCGGGTCTTGTGGTGGCTACATTGC 533
Query 1119 CGGATCAAAGGACCTCATCCAATATTTGAAGCACCAATGCCCGGCTCACCTTTACGCAAC 1178
|||||| |||||||| |||||||||||||||| || | ||| |||||||||||||||||
Sbjct 534 CGGATCCAAGGACCTTGTCCAATATTTGAAGCAACATTACCCTGCTCACCTTTACGCAAC 593
Query 1179 GTCAATTTCAACTCCTTCCGCGAC-ACAAATCATATCGGCGATAAAGGTTATCCTTGGAG 1237
||||||||||||||| | || || |||| |||||||||| ||||| || ||| ||||||
Sbjct 594 ATCAATTTCAACTCCTGCTGC-ACAACAAGTCATATCGGCCATAAAAGTCATCTTTGGAG 652
Query 1238 AGGACGGTTCAAACAGAGGGGCACAAAAGTTAGCAAGAATAAGGGAGAACAGCAACTTTT 1297
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 653 TGGACGGTTCAAACAGAGGGGAACTAAAGTTAGCAAGAATAAGGGAGAACAGCAACTTTT 712
Query 1298 TCAGGGCTGAGTTGCAGAAGATGGGGTTTGAGGTTCTTGGAGACAATGATTCCCCAGTCA 1357
|||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||
Sbjct 713 TCAGGGCTGAGTTGCAGAAGATGGGGTTCAAGGTCCTTGGAGTTTATGATTCCCCAATCA 772
Query 1358 TGCCAATAATGCTTTACAATCCAGCAAAAATTC-CAGCCTTCTCAAGGGAATGTTTGCGA 1416
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 773 TGCCAATAATGCTTTACAATCCAGCAAAAAT-CGCAGCCTTCTCAAGGGAATGTTTGCGA 831
Query 1417 GAAAACTTGGCAGTTGTGGTCGTCGGTTTCCCAGCTACACCGCTATTGCTAGCCAGGGCT 1476
|||||||||||| | ||||| ||| |||||||| ||| ||| ||||||||||||||||||
Sbjct 832 GAAAACTTGGCAATCGTGGTAGTCAGTTTCCCACCTATACCTCTATTGCTAGCCAGGGCT 891
Query 1477 CGTATTTGCATAT-CCGCATCTCACTCAAGAGAAGATCTTATTAAAGCCCTACAGGTTAT 1535
|||||||||| || |||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 892 CGTATTTGCA-ATTCCGCATCTCACTTAAGAGAAGATCTTATTAAAGCCCTGCAGGTTAT 950
Query 1536 AAGCAAAGCAGGTGACCTTACCGGGATCAAATATTTTCCGGCTGCTCCAAAGAAGCAAGA 1595
||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 951 AAGCAGAGCAGGTGACCTTACCGGGATCAAATATTTTACGGCAGCTCCAAAGAAGCAAGA 1010
Query 1596 AGTAGAGAAAAATGGCA 1612
|| ||| |||| |||||
Sbjct 1011 AG-AGA-AAAA-TGGCA 1024
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92820807705
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5