BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485240
Length=3106
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48870.1 | Symbols: ATCLPC, ATHSP93-III, HSP93-III | Clp ATP... 5035 0.0
AT5G50920.1 | Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1 | ... 1940 0.0
AT3G45450.1 | Symbols: | Double Clp-N motif-containing P-loop ... 416 6e-115
> AT3G48870.1 | Symbols: ATCLPC, ATHSP93-III, HSP93-III | Clp ATPase
| chr3:18122198-18126638 REVERSE LENGTH=3157
Length=3157
Score = 5035 bits (2726), Expect = 0.0
Identities = 2989/3115 (96%), Gaps = 22/3115 (1%)
Strand=Plus/Plus
Query 1 TCTTCTTCACTTTCCTATCTCTATCCCATTAAAAGGAGTCTCTCGCTTTCTCGAACTTCT 60
|||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 39 TCTTCTTCACTTTCCTATCTCTTTCCCAATAAAAGGAGTCTCTCGCTTTCTCCAACTTCG 98
Query 61 CTATCCAAAGGCGTCGACGCAGCCTCCAACA---CATCATGGCTTGGTGTG-TAGCTGTT 116
||||||||||||||||| | |||||||||| |||||||||||||| | ||||| ||
Sbjct 99 CTATCCAAAGGCGTCGA--C-GCCTCCAACATTGCATCATGGCTTGGT-CGATAGCTCTT 154
Query 117 -TTGAAAGCTCCTTTATTTGGTCCCGGAAGGCATGTGCAAGCCGAAGAATACAGAAAACC 175
|| | | ||||||| ||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct 155 CTT-ACACCTCCTTTTTTTGGTCCCGGAAGGCATGTGCAGGCCAAAGAATACAGGGAACC 213
Query 176 AAGAGGGTGTGTGAAGATGATGTGCAGTTTACAAGCACCTGGTCTGAGAATTCAGGCCAA 235
|||||||||||||| || |||| |||||||| ||||||||| |||||||||||||||||
Sbjct 214 AAGAGGGTGTGTGATGAAGATGAGCAGTTTAAAAGCACCTGTTCTGAGAATTCAGGCCAC 273
Query 236 AGAATACAGAAAACCAAGAGGGTGTGTGAAGATGATGTGCAGTTTACAAGCACCTGTTCT 295
|||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct 274 AGAATACAGAGAACCAAGAGGGCGTGTGAAGATGATGTCCAGTTTACAAGCACCTCTTCT 333
Query 296 GAAAATTCAGAGCTTCTCAGGGTTAAGGGCCCCCAATGCATTAGATTATATGGCAAGGCC 355
|| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||
Sbjct 334 GACAATTCAGAGCTTCTCAGGGTTAAGGGCCCCCAGTGCATTAGATTATTTGGGAAGGCC 393
Query 356 TTGTCCAGGTTTCCTTGTTAAGTTTAAACTTGCAATATCATCTCGGAGAGAAAAAGCTAG 415
| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct 394 TAGTCCAGGTTTCCTTGTTAAGTATAAACTTGCAAAATCATCTGGGAGAGAAAAAGCTAG 453
Query 416 CCGATTTGTACCCAAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAAT 475
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 454 CCGATGTGTACCCAAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAAT 513
Query 476 GCTGTCTCAAGAGGAAGCTCGTAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACT 535
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 514 GCTGTCTCAAGAGGAAGCTCGGAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACT 573
Query 536 GTTGGGTCTAATTGGAGAAGGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGAT 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 GTTGGGTCTAATTGGAGAAGGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGAT 633
Query 596 CAATCTTAAAGATTCACGCGTGGAAGTGGAAAAGATAATTGGGAGAGGCAGTGGATTTGT 655
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 634 CAATCTTAAAGATTCACGCGTGGAAGTAGAAAAGATAATTGGGAGAGGCAGTGGATTCGT 693
Query 656 GGCAGTGGAGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGA 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 GGCAGTGGAGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGA 753
Query 716 AGCTCGACAACTTGGGCATAACTACATTGGTTCAGAGCACCTTTTGCTTGGTCTACTTCG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 AGCTCGACAACTTGGGCATAACTACATTGGTTCAGAGCACCTTTTGCTTGGTCTACTTCG 813
Query 776 TGAAGGGGAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTGGGTGCAGATCCTAGTAATAT 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 814 TGAAGGGGAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTGGGTGCAGATCCTAGTAATAT 873
Query 836 CCGGACACAGGTTATACGTATGGTCGGGGAAAACAATGAAGTCACAGCAAGCGTTGGTGG 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 ACGGACACAGGTTATACGTATGGTCGGGGAAAACAATGAAGTCACAGCAAGCGTTGGTGG 933
Query 896 GGGAAGCAGCGGAAACAGCAAAATGCCAACACTAGAAGAGTATGGGACTAACTTAACTAA 955
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 934 GGGAAGCAGCGGAAACAGCAAAATGCCAACACTTGAAGAGTATGGGACTAACTTAACTAA 993
Query 956 ACTAGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGT 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 ACTAGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGT 1053
Query 1016 GGTCCAGATCTTGGCTCGAAGAACCAAGAACAACCCGTGTCTTATTGGAGAACCTGGAGT 1075
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1054 GGTCCAGATCTTGGCTCGAAGAACCAAGAACAACCCATGTCTTATTGGAGAACCTGGAGT 1113
Query 1076 TGGTAAGACAGCAATAGCGGAAGGTCTTGCACAGCGAATTGCTAGTGGTGATGTTCCTGA 1135
||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1114 TGGTAAGACGGCAATAGCAGAAGGACTTGCACAGCGAATAGCTAGTGGTGATGTTCCTGA 1173
Query 1136 AACAATTGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAA 1195
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 AACAATCGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAA 1233
Query 1196 ATACCGTGGAGAATTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGA 1255
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1234 ATACCGTGGAGAGTTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGA 1293
Query 1256 TGAGATAATTCTATTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGG 1315
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1294 TGAGATAATTCTGTTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGG 1353
Query 1316 TGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTAT 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1354 TGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTAT 1413
Query 1376 TGGTGCAACAACA-TCGGATGAGTACAGGAAGCACATTGAGAAAGATCCTGCATTGGAGA 1434
||||||||||||| | | ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1414 TGGTGCAACAACAATTG-ATGAGTACAGGAAACACATTGAGAAAGATCCTGCATTGGAGA 1472
Query 1435 GACGTTTCCAGCCTGTGAAGGTACCTGAACCAACTGTAGAAGAAGCTATACAGATCTTGC 1494
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1473 GACGGTTCCAGCCTGTGAAAGTACCTGAACCAACTGTAGAAGAAGCTATACAGATTTTGC 1532
Query 1495 ACGGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGGTACACTGATGAAGCCTTGG 1554
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1533 AAGGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGATACACTGATGAAGCCTTGG 1592
Query 1555 TTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGGTTTCTTCCCGACAAAGCGA 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1593 TTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGGTTTCTTCCCGACAAAGCGA 1652
Query 1615 TTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGGTACCTGAGG 1674
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1653 TTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGCTTCCTGAGG 1712
Query 1675 AAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAAGAGAAGAATGAAGCTGTGC 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1713 AAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAAGAGAAGAATGAAGCTGTGC 1772
Query 1735 GAGGCCAAGACTTTGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAGGGCTG 1794
|| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1773 GAAGCCAAGACTTCGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAAGGCTG 1832
Query 1795 AGATAGCTAATGTTTTAGCTTTAGGCAAAGAAGTGGCCAAAGCCGAGAATGAAGCTGAGG 1854
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1833 AGATAGCTAATGTTTTATCTCGAGGCAAAGAAGTGGCCAAAGCCGAGAATGAAGCTGAGG 1892
Query 1855 AAGGAGGACCTACTGTCACAGAATCCGACATCCAACACATTGTTGCCACCTGGACAGGAA 1914
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 1893 AAGGAGGACCTACTGTCACAGAATCTGACATCCAACACATCGTCGCCACCTGGACAGGAA 1952
Query 1915 TCCCAGTAGAGAAAGTCTCGTCTGATGAATCTAGCCGTCTTCTCCAAATGGAGCAGACCC 1974
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1953 TCCCGGTAGAGAAAGTCTCGTCTGATGAATCTAGCCGTCTTCTCCAAATGGAGCAGACCC 2012
Query 1975 TTCACACAAGAGTCATTGGCCAAGATGAAGCCGTTAAAGCAATCAGCCGGGCTATCCGCC 2034
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2013 TTCACACAAGAGTCATTGGCCAAGATGAAGCCGTTAAAGCAATCAGTCGGGCTATCCGCC 2072
Query 2035 GTGCCCGTGTTGGACTCAAGAACCCAAACCGTCCTATCGCCAGTTTCATCTTCTCTGGTC 2094
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GTGCCCGTGTTGGGCTCAAAAACCCAAACCGTCCTATCGCCAGTTTCATCTTCTCTGGTC 2132
Query 2095 CAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGCTTACTACTTTGGTTCAG 2154
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2133 CAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGCTTACTACTTCGGTTCAG 2192
Query 2155 AAGAAGCAATGATACGTCTTGACATGAGTGAGTTCATGGAACGGCACACTGTTTCAAAAC 2214
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 2193 AAGAAGCAATGATCCGTCTTGACATGAGTGAGTTCATGGAACGACACACTGTTTCGAAAC 2252
Query 2215 TCATTGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGCGGTCAGTTAACTGAGGCGG 2274
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 2253 TCATCGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGAGGTCAGTTAACAGAGGCGG 2312
Query 2275 TTCGACGCAGGCCCTACACACTTGTTCTCTTTGACGAAATTGAGAAAGCACATCCTGATG 2334
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 2313 TTCGACGCAGGCCCTACACTCTTGTTCTCTTTGACGAAATTGAGAAAGCACATCCCGATG 2372
Query 2335 TTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACTAACTGATAGCAAAGGAAGAA 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2373 TTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACTAACTGATAGCAAAGGAAGAA 2432
Query 2395 CTGTCGATTTCAAGAACACGCTTCTTATCATGACTTCAAATGTAGGAAGCAGCGTGATCG 2454
||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 2433 CTGTCGATTTCAAGAACACGCTTCTGATCATGACTTCAAACGTAGGGAGCAGCGTGATCG 2492
Query 2455 AAAAAGGTGGTAGAAGAATCGGGTTTGATCTTGACCATGACGAGAAAGACAGCAGTTACA 2514
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2493 AAAAAGGTGGTAGAAGAATTGGGTTTGATCTTGACCACGACGAGAAAGACAGCAGTTACA 2552
Query 2515 ACAGAATCAAGAGCTTAGTGACTGAGGAACTAAAACAATATTTCAGACCGGAGTTCTTGA 2574
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2553 ACAGAATCAAGAGCTTAGTGACTGAGGAACTAAAACAGTATTTCAGACCAGAGTTCTTGA 2612
Query 2575 ACAGGTTAGATGAGATGATTGTTTTCAGACAGTTGACAAAGCTGGAAGTCAAAGAGATTG 2634
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2613 ACAGGTTAGATGAGATGATTGTTTTCAGACAGTTAACAAAGCTGGAAGTCAAGGAGATTG 2672
Query 2635 CTGATATAATGCTTAAAGAAGTGGTGGCGAGACTTGAGGACAAAGAGATTGAGCTTCAGG 2694
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2673 CTGATATAATGCTTAAAGAAGTGGTGGCGAGACTTGAGGTCAAAGAGATTGAGCTTCAGG 2732
Query 2695 TAACTGAGAGGTTTAAAGA-ACGAGTGGTGGATGAAGGATTCGACCCAAGTTATGGCGCG 2753
| ||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||
Sbjct 2733 TGACTGAGAGGTTTAAAGAGA-GAGTGGTGGATGAAGGATTCGACCCGAGTTATGGTGCG 2791
Query 2754 AGGCCGCTTAGACGTGCAATTATGAGGCTTTTGGAGGATAGTATGGCGGAGAAGATGCTT 2813
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2792 AGGCCACTTAGACGTGCAATAATGAGGCTTTTGGAGGATAGTATGGCGGAGAAGATGCTT 2851
Query 2814 TCAAGGGACATTAAAGAAGGAGATTCTGTGATTGTTGATGTTGATGCGGAAGGAAGTGTG 2873
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2852 TCAAGGGACATTAAAGAAGGAGATTCTGTGATTGTTGATGTTGATGCCGAAGGAAGTGTG 2911
Query 2874 GTTGTGTTGAGTGGTAACAACAGTGGACGTGCTGGTGGTTTTGCTGCTGAAGAAGCCATG 2933
|||||||||||||||| || | |||||||| ||||||||||||||||||||||||||||
Sbjct 2912 GTTGTGTTGAGTGGTACCA-C--TGGACGTGTTGGTGGTTTTGCTGCTGAAGAAGCCATG 2968
Query 2934 GAAGATCCAATTCCAATATTGTAGAAGGAAACAAGGGTTTTTCTAGAGATTATT-TTTTC 2992
|||||||| |||||||||||||||||||||||||||| |||||||| |||| || ||||
Sbjct 2969 GAAGATCCTATTCCAATATTGTAGAAGGAAACAAGGGGTTTTCTAGTGATT-TTCTTTT- 3026
Query 2993 AAGTGTTATTGAATTGACTATTGAGTCTCTT-TCGATTCGTATTTTGTACTTTAATCTCT 3051
||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct 3027 AAGTGTTATTGAATTGACTATTGAGTCTCTTAT-GATTCGTATTTTGTACTCTAATCTCT 3085
Query 3052 TTGTTTCTGGATATTGATTGTTTGGGAATCATAGAGAATTTCCCACACaaaaaaa 3106
||||||||||||| ||| |||| ||||| || ||||||||||||||| |||||||
Sbjct 3086 TTGTTTCTGGATAATGACTGTTCGGGAACCACAGAGAATTTCCCACAAAAAAAAA 3140
> AT5G50920.1 | Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1
| CLPC homologue 1 | chr5:20715469-20720374 REVERSE LENGTH=3189
Length=3189
Score = 1940 bits (1050), Expect = 0.0
Identities = 2016/2478 (81%), Gaps = 83/2478 (3%)
Strand=Plus/Plus
Query 429 AAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAATGC-TGTCTCAAGA 487
|||||||||||||| | ||||| |||||||| || || || || |||| || |||| ||
Sbjct 432 AAAGCAATGTTTGAAAGATTTACGGAGAAAGCTATCAAAGTTATTATGCTTG-CTCAGGA 490
Query 488 GGAAGCTCGTAGACTTGGCCATAACTTTGTTGGG-ACTGAGCAAATAC-TGTTGGGTCTA 545
||||||| | ||||| ||||| || |||| |||| || || ||||| | | || |||||
Sbjct 491 GGAAGCTAGAAGACTAGGCCACAATTTTG-TGGGAACCGAACAAATTCTTCTT-GGTCTT 548
Query 546 ATTGGAGAAGGG-ACTGGGATTGCCGCCAAGGTTCTT-AAATCCATGGGGATCAATCTT- 602
||||| | |||| ||||| || || || || ||| || |||||||||||||| || |||
Sbjct 549 ATTGGTG-AGGGTACTGGAATCGCTGCTAAAGTT-TTGAAATCCATGGGGATTAA-CTTA 605
Query 603 AAAGATTCACGCGTGGAAGTGGAAAAGATAATTGGGAGAGGCAGTGGATTTGTGGCAGTG 662
|||||| |||| ||||| || || ||||| ||||| || || ||||| ||||| || ||
Sbjct 606 AAAGATGCACGTGTGGAGGTTGAGAAGATTATTGGAAGGGGAAGTGGCTTTGTTGCTGTT 665
Query 663 GAGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGAAGCTCGA 722
||||| ||||| |||||||| || ||||| || || || | || || |||||||||||
Sbjct 666 GAGATCCCATTCACTCCTCGTGCCAAGCGTGTTCTTGAACTCTCTCTTGAGGAAGCTCGC 725
Query 723 CAACTTGGGCATAACTACATTGGTTCAGAGCACCTTTTGCTT-GGTCTACTTCGTGAAGG 781
|||||||| || || |||||||| || ||||||||||||||| ||| | || ||||||||
Sbjct 726 CAACTTGGTCACAATTACATTGGATCCGAGCACCTTTTGCTTGGGT-TGCTACGTGAAGG 784
Query 782 GGAGGGTGTGGCAGCTCGTGT-CTTGGAGAATTTGGGTGCAGATCCTAGTAATATCCGGA 840
|| || || |||||||| || ||| |||||||| |||||||||||||||||||| || |
Sbjct 785 TGAAGGAGTTGCAGCTCGAGTCCTT-GAGAATTTAGGTGCAGATCCTAGTAATATTCGCA 843
Query 841 CACAGGTTATACGTATGGTCGGG-GAAAACAATGAAGTCACAGC-AAGCGTTGGTGGG-G 897
| ||||| ||||| ||||| ||| || ||||||||||| || || || ||||| ||| |
Sbjct 844 CTCAGGTGATACGCATGGT-GGGTGAGAACAATGAAGTAACTGCTAA-TGTTGG-GGGAG 900
Query 898 GAAGCAGCGGAAACAGCAAAATGCCAACACTAGAAGAGTATGGGACTAACTTAACTAAAC 957
|||||||| | || || |||||||| || |||||||| || || ||||| || ||||
Sbjct 901 GAAGCAGC---AGCAATAAGATGCCAACTCTTGAAGAGTACGGAACAAACTTGACGAAAC 957
Query 958 TAGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGTGG 1017
| || |||||||||||| |||| || ||||||||||||||||| ||||| ||||| ||||
Sbjct 958 TGGCTGAGGAGGGTAAATTGGACCCAGTTGTTGGAAGGCAGCCGCAGATAGAACGTGTGG 1017
Query 1018 TCCAGA-TCTTGGCTCGAAGAACCAAGAACAACCCGTGTCTTATTGGAGAACCTGGAGTT 1076
| || | ||||||| | ||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1018 TGCAAATTCTTGGC-AGGAGAACCAAGAACAACCCTTGTCTTATTGGAGAACCTGGTGTT 1076
Query 1077 GGTAAGACAGCAATAGCGGAAGGTCTTGCACAGCGAATTGCTAGTGGTGATGTTCCTGAA 1136
||||||||||| || || ||||| ||||||||||| ||||| ||||| ||||| ||||||
Sbjct 1077 GGTAAGACAGCTATTGCTGAAGGACTTGCACAGCGTATTGCCAGTGGCGATGTCCCTGAA 1136
Query 1137 ACAATTGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAAA 1196
|| ||||| ||||||| ||||||||| || || |||||||||||||| |||||||| |||
Sbjct 1137 ACTATTGAAGGGAAGAAGGTTATAACACTCGACATGGGTCTTCTAGTTGCTGGAACAAAA 1196
Query 1197 TACCGTGGAGAATTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGAT 1256
|| |||||||| || || || |||||||| ||||||||||||||||| || || || |||
Sbjct 1197 TATCGTGGAGAGTTTGAAGAGAGATTGAAAAAGCTTATGGAGGAAATTAGACAGAGCGAT 1256
Query 1257 GAGATAATTC-TATTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGG 1315
||||||| || ||||||| || |||||||| || | || || || ||||| || |||||
Sbjct 1257 GAGATAA-TCTTATTTATCGACGAAGTGCATACTTTGATTGGGGCTGGAGCAGCAGAAGG 1315
Query 1316 TGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTAT 1375
||| || || || |||||||| ||||| |||||||| || ||||||||||||||||| ||
Sbjct 1316 TGCAATTGACGCAGCTAACATTTTAAAACCAGCTCTCGCTAGAGGTGAATTGCAGTGCAT 1375
Query 1376 TGGTGCAACAACATCGGATGAGTACAGGAAGCACATTGAGAAAGATCCTGCATTGGAGAG 1435
||| || ||||||| ||||| ||| | ||||||||||||||||| ||||| ||||| ||
Sbjct 1376 TGGAGCGACAACATTAGATGAATACCGAAAGCACATTGAGAAAGACCCTGCCTTGGAAAG 1435
Query 1436 ACGTTTCCAGCCTGTGAAGGTACCTGAACCAACTGTAGAAGAAGCTATACAGAT-CTTGC 1494
| | |||||||| ||||| ||||||||||| || || || ||| |||| ||||| |||
Sbjct 1436 AAGATTCCAGCCAGTGAAAGTACCTGAACCTACCGTGGATGAAACTATTCAGATCCTT-A 1494
Query 1495 ACGGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGGTACACTGATGAAGCCTTGG 1554
| |||||||| ||||| ||||| || |||||||| ||||| ||||| || ||| | || |
Sbjct 1495 AGGGTCTGCGAGAGCGATATGAAATTCACCACAAGCTTCGTTACACAGACGAATCTTTAG 1554
Query 1555 TTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGGTTT-CTTCCCGACAAAGCG 1613
| || |||||||| |||||| | ||||| || ||||||| |||| ||||| ||||| ||
Sbjct 1555 TAGCAGCTGCACAGTTGTCATACCAGTATATAAGTGATC-GTTTCCTTCCTGACAAGGCA 1613
Query 1614 ATTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGGTACCTGAG 1673
||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||
Sbjct 1614 ATTGACTTGATTGATGAAGCTGGTTCTCGGGTTCGACTTCGTCATGCACAGGTCCCTGAG 1673
Query 1674 GAAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAA-GAGAAGAATGAAGCTGT 1732
|||||||| |||||||| ||| | || ||||| || | |||| |||||||||||||||||
Sbjct 1674 GAAGCTAGGGAGCTTGAGAAGGAGCTTAGGCAGAT-AACAAAGGAGAAGAATGAAGCTGT 1732
Query 1733 GCGAGGCCAAGACTTTGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAGGGC 1792
|| ||||| |||||||||| |||||| | | ||| || | ||||| || ||||| ||
Sbjct 1733 CCGTGGCCAGGACTTTGAGAAGGCTGGGACACTTCGGGATAGAGAAATTGAACTCAGAGC 1792
Query 1793 TGAGATAGCT--AATGTTTTAGCTTTAGGCAAAGAAG-TG-GCCAAAGCCGAGAATGAAG 1848
|||| || || || | ||| |||| ||| || || | |||||| |||| || ||
Sbjct 1793 TGAGGTATCTGCAA--TCCAAGCGAAAGGC-AAGGAGATGAG-CAAAGCAGAGAGTG-AG 1847
Query 1849 -CTGAG-GAAGG-AGGACCTACT-GTCACAGAATCCGACATCCAACACATTGTTG-CCAC 1903
| | | | ||| ||| |||| | ||||| || || |||||||||||||||| || | |
Sbjct 1848 ACCG-GTG-AGGAAGGCCCTA-TGGTCACGGAGTCAGACATCCAACACATTG-TGTCTTC 1903
Query 1904 CTGGACAGGAATCCCAGTAGAGAAAGTCTCGTCTGATGAATCTAG-CCGTCTTCTCCAA- 1961
||||| || || || || |||||||| || | ||||| ||| | |||||| || |||
Sbjct 1904 ATGGACTGGTATTCCTGTTGAGAAAGTATCAACCGATGAGTCT-GACCGTCTCCT-CAAG 1961
Query 1962 ATGG-AGCAGACCCTTCACACAA-G-AGTCATTGGCCAAGATGAAGCCGTTAAAGCAATC 2018
|||| || | ||||| |||| || | | |||| |||||||| ||||| || ||||| ||
Sbjct 1962 ATGGAAG-AAACCCTCCACA-AACGTA-TCATAGGCCAAGACGAAGCTGTGAAAGCCATA 2018
Query 2019 AGCCGGGCTATCCGCCGTGCCCGTGTTGGACTCAAGAACCCAAACCGTCCTATCGCCAGT 2078
||||| || || |||||||| ||||||||||||||||| || |||||||| ||||| |||
Sbjct 2019 AGCCGAGCCATTCGCCGTGCACGTGTTGGACTCAAGAATCCTAACCGTCCAATCGCTAGT 2078
Query 2079 TTCATCTTCTCTGGTCCAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGCT 2138
||||| ||||| |||||||| |||||||||||||| |||||||| || || || || |||
Sbjct 2079 TTCATATTCTCGGGTCCAACCGGTGTTGGGAAATCTGAGCTTGCCAAAGCTTTAGCAGCT 2138
Query 2139 TACTACTTTGGTTCAGAAGAAGCAATGATACGTCTTGACATGAGTGAGTTCATGGA-ACG 2197
|||||||| ||||| |||||||| ||||| ||||| || ||||||||||||||||| | |
Sbjct 2139 TACTACTTCGGTTCCGAAGAAGCCATGATTCGTCTAGATATGAGTGAGTTCATGGAGA-G 2197
Query 2198 GCACACTGTTTCAAAACTCATTGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGCGG 2257
||||||||| || |||||||| |||||||||||||| || || |||||||| ||||| ||
Sbjct 2198 GCACACTGTCTCCAAACTCATCGGTTCACCTCCTGGATATGTCGGATACACCGAAGGAGG 2257
Query 2258 TCAGTTAACTGAGGCGGTTCGACGCAGGCCC-TACACAC-TTGTTCTCTTTGACGAAATT 2315
||||||||| || |||||| |||| |||| ||||| | | ||||| || || || |||
Sbjct 2258 TCAGTTAACAGAAGCGGTTAGACG-TCGCCCTTACAC-CGTCGTTCTATTCGATGAGATT 2315
Query 2316 GAGAAAGCACATCCTGATGTTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACTA 2375
|| ||||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||| ||
Sbjct 2316 GAAAAAGCCCATCCAGATGTTTTCAACATGATGCTTCAAATCCTTGAAGATGGTAGATTA 2375
Query 2376 ACTGATAGCAAAGGAAGAACTGTCGATTTCAAGAACACGCTTCTTATCATGACTTCAAAT 2435
|| || |||||||||||||| || || ||||| ||||| ||||| |||||||| |||||
Sbjct 2376 ACAGACAGCAAAGGAAGAACAGTTGACTTCAAAAACACACTTCTCATCATGACATCAAAC 2435
Query 2436 GTAGGAAGCAGCGTGATCGAAAAAGGTGGTAGAAGAATCGGGTTTGATCTT-GACCATGA 2494
|| |||||||||||||| || ||||| || ||| | ||||| || || ||| ||| | ||
Sbjct 2436 GTCGGAAGCAGCGTGATTGAGAAAGGAGGAAGACGTATCGGATTCGA-CTTAGACTACGA 2494
Query 2495 CGAGAAAGACAGCAGTTACAACAGAATCAAGAGC-TTAGTGACTGAGGAACTAAAACAAT 2553
|||||||||||||||||||||||||||||||||| || || || ||||| || |||||||
Sbjct 2495 CGAGAAAGACAGCAGTTACAACAGAATCAAGAGCCTT-GTAACAGAGGAGCTGAAACAAT 2553
Query 2554 ATTTCAGACCGGAGTTCTTGAACAGGTTAGATGAGATGATTGTTTTCAGACAGTTGACAA 2613
| |||||||| |||||| | |||||| |||| ||||||||||| ||||||||| | ||||
Sbjct 2554 ACTTCAGACCCGAGTTCCTAAACAGGCTAGACGAGATGATTGTGTTCAGACAGCTAACAA 2613
Query 2614 AGCTGGAAGTCAAAGAGATTGCTGATATAATGCTTAAAG-AAGTGGTGGCGAGACTTGAG 2672
|||||||||| ||||| |||||||| ||| || || ||| ||||| | | ||| ||||
Sbjct 2614 AGCTGGAAGTGAAAGAAATTGCTGACATACTG-TTGAAGGAAGTGTTCGAGAGG-TTGAA 2671
Query 2673 GAC-AAAGAGATTGAGCTTCAGGTAACTGAGAGGTTTAAAGA-ACGAGTGGTGGATGAAG 2730
|| |||||||||||||||||||| || || || || ||||| | |||| || || ||||
Sbjct 2672 GAAGAAAGAGATTGAGCTTCAGGTGACCGAAAGATTCAAAGAGA-GAGTAGTAGACGAAG 2730
Query 2731 GATTCGA-CCCAAGTTATGGCGCGAGGCCGCTT-AGACGTGCAATTATGAGGCTTTTGGA 2788
| || | ||| || ||||| || || ||| || ||| | || || ||||||||||| ||
Sbjct 2731 G-TTATAACCCGAGCTATGGAGCAAGACCG-TTGAGAAGAGCCATCATGAGGCTTTTAGA 2788
Query 2789 GGATAGTATGGCGGAGAAGATGCTTTCAAGGGACATTAAAGAAGGAGATTCTGTGATTGT 2848
|||||||||||| |||||||||||| | || || || ||||||||||| || ||||||||
Sbjct 2789 GGATAGTATGGCAGAGAAGATGCTTGCGAGAGAGATCAAAGAAGGAGACTCGGTGATTGT 2848
Query 2849 TGATGTTGATGCGGAAGG 2866
|| ||||| || |||||
Sbjct 2849 GGACGTTGACGCTGAAGG 2866
> AT3G45450.1 | Symbols: | Double Clp-N motif-containing P-loop
nucleoside triphosphate hydrolases superfamily protein | chr3:16673146-16674880
FORWARD LENGTH=1026
Length=1026
Score = 416 bits (225), Expect = 6e-115
Identities = 277/302 (92%), Gaps = 3/302 (1%)
Strand=Plus/Plus
Query 435 ATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAATGCTGTCTCAAGAGGAAGCT 494
||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||
Sbjct 1 ATGTTTGAGCGTTTTACTGAGAAAGCAATTAAGGTCATAACGTTGGCTCAAGAGGAAGCT 60
Query 495 CGTAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACTGTTGGGTCTAATTGGAGAA 554
|| ||||||||| |||||||| ||||||||||||| |||||| | |||||||||| |||
Sbjct 61 CGGAGACTTGGCTATAACTTTTTTGGGACTGAGCATATACTGCTAAGTCTAATTGGGGAA 120
Query 555 GGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGATCAATCTTAAAGATTCACGC 614
||||||||||| || || |||||||||||||||||||||||||||||||||||| ||||
Sbjct 121 GGGACTGGGATCGCTGCAAAGGTTCTTAAATCCATGGGGATCAATCTTAAAGATGCACGT 180
Query 615 GTGGAAGTGGAAAAGATAATTGGGAGAGGCAGTGGATTTGTGGCAGTGGAGATTCCATTT 674
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 181 GTGGAAGTGGAAAAGATAATTGGGAGAGGCAGTGGATTTGTTGTAGTGGAGATTCCATTT 240
Query 675 ACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGAAGCTCGACAACTTGGGCAT 734
||||||||| |||||| |||||||| |||||||||||||||||||||||||| || |||
Sbjct 241 ACTCCTCGC--AAAGCGTGTGCTGGATTTGTCACTAGAGGAAGCTCGACAACTCGG-CAT 297
Query 735 AA 736
||
Sbjct 298 AA 299
Score = 396 bits (214), Expect = 8e-109
Identities = 354/416 (85%), Gaps = 31/416 (7%)
Strand=Plus/Plus
Query 962 AGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGTGGTCCA 1021
||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 445 AGAAGA-GGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATAAAACGAGTGGTCCA 503
Query 1022 GATCTTGGCTCGAAGAA-C--CAAGAACAACCCGTGTCTTATTGGAGAA-CCTGGAGTTG 1077
||||||||||||||||| | || ||||||| |||||||||||||| || ||||||||||
Sbjct 504 GATCTTGGCTCGAAGAACCTGCAGGAACAACGCGTGTCTTATTGGA-AAGCCTGGAGTTG 562
Query 1078 GTAAGACAGCAATAGCGGAAGGTCTTGCACAGCGAATTGCTAGTGGTGATGTTCCTGAAA 1137
| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 563 GGAAGAGAGCAATAGCGGAAGGAATTGCACAGCGAATTGCTAGTGGTGATGTTCCTGAAA 622
Query 1138 CAATTGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAAAT 1197
|||| ||||||||| | || | | | ||| || ||||||||||||||||
Sbjct 623 CAATCAAGGGGAAGATGA--ATG----TGGC-A-GGGAATT---GTGGCTGGAACGAAAT 671
Query 1198 ACCG-TGGAGAATTCGAGG-AAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGA 1255
||| ||||||| ||||| ||| |||||||||| |||||| | || || ||||
Sbjct 672 -CCGGTGGAGAAGCCGAGGGAAA-ATTGAAGAAGTTTATGG-G-----CA---AA-GTGA 719
Query 1256 TGAGATAATTCTATTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGG 1315
||| |||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct 720 TGACATAATTCTGTTTATTGATGAAATGCACTTGCTCATCGGTGCAGGAGCCGTTGAAGG 779
Query 1316 TGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGT 1371
|||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||
Sbjct 780 TGCGATAGATGCTGCTAACATCTTAAAACCAGCTCTAGAAAGATGTGAATTGCAGT 835
Score = 165 bits (89), Expect = 2e-39
Identities = 93/95 (98%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 1396 AGTACAGGAAGCACATTGAGAAAGATCCTGCATTGGAGAGACGTTTCCAGCCTGTGAAGG 1455
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 833 AGTACAGGAAGCACATTGAGAATGATCCTGCATTGGAGAGACGGTTCCAGCCTGTGAAGG 892
Query 1456 TACCTGAACCAACTGTAGAAGAAGCTATACAGATC 1490
|||||||||||||||||||||||||||||||||||
Sbjct 893 TACCTGAACCAACTGTAGAAGAAGCTATACAGATC 927
Score = 86.1 bits (46), Expect = 2e-15
Identities = 57/62 (92%), Gaps = 2/62 (3%)
Strand=Plus/Plus
Query 784 AGGGTGTGGCAGCTCGTGTCTTGGAGAAT-TTGGGTGCAGATCCTAGTAATATCCGGACA 842
||||| | |||| ||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 299 AGGGTATTGCAGTTCGTGTCTTGGAG-ATATTGGGTGCAGATCCTAGTAATATCCGGACA 357
Query 843 CA 844
||
Sbjct 358 CA 359
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154464017497
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5