BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485262
Length=1242
Score E
Sequences producing significant alignments: (Bits) Value
AT3G49110.1 | Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidas... 1666 0.0
AT3G49120.1 | Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34 | ... 1399 0.0
AT3G32980.1 | Symbols: | Peroxidase superfamily protein | chr3... 966 0.0
AT1G68850.1 | Symbols: | Peroxidase superfamily protein | chr1... 54.7 2e-06
> AT3G49110.1 | Symbols: PRX33, PRXCA, ATPRX33, ATPCA | peroxidase
CA | chr3:18200664-18203142 FORWARD LENGTH=1365
Length=1365
Score = 1666 bits (902), Expect = 0.0
Identities = 1164/1284 (91%), Gaps = 43/1284 (3%)
Strand=Plus/Plus
Query 1 ATCTTCTCCATTAAACCCAATTAAATACTTTTCATTTTCCTTGTGAAAAATGC-A----G 55
||||||||| ||||||||| ||||||| |||||||| |||||||||||||||| |
Sbjct 1 ATCTTCTCCGTTAAACCCATTTAAATAGTTTTCATTGTCCTTGTGAAAAATGCAATTCTC 60
Query 56 TTC-TCTTC----A-----TTCACTTGGACAATCTTAATCACATTGGGATGTCTTATGCT 105
||| ||||| | |||||||||||| | ||||||||| ||||||||||||||||
Sbjct 61 TTCATCTTCTATTACTTCTTTCACTTGGACAGTTTTAATCACAGTGGGATGTCTTATGCT 120
Query 106 TCGTGCGTCTCTGTCCGATGCTCAACTTACCCCTACCTTCTACGACACTTCATGTCCTAA 165
| |||||||| | ||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 121 TTGTGCGTCTTTCTCCGATGCTCAACTTACCCCTACTTTTTACGACACTTCATGTCCTAC 180
Query 166 CGTCACCAACATTGTAAGAGATACCATTGTGAACGAGCTAAGATCGGACCCTCGTATCGC 225
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 181 CGTCACCAACATTGTAAGAGATACCATTGTCAACGAGCTAAGATCGGACCCTCGTATCGC 240
Query 226 CGGGAGCATCCTTCGTCTTCACTTCCACGACTGCTTTGTTAATGGTTGTGACGCATCCAT 285
||||||||||||||||||||||||||| ||||||||||||||||||||||| || || ||
Sbjct 241 CGGGAGCATCCTTCGTCTTCACTTCCATGACTGCTTTGTTAATGGTTGTGATGCTTCGAT 300
Query 286 CTTGTTAGACAACACGACATCATTTCAG-ACAGAGAAAGATGCGCTTGGAAACGCAAATT 344
|||||||||||||||||||||||||| | |||||||||||||| |||||||| |||||||
Sbjct 301 CTTGTTAGACAACACGACATCATTTC-GAACAGAGAAAGATGCACTTGGAAATGCAAATT 359
Query 345 CGGCTCGAGGATTTCCTGTGATTGATAGAATGAAAGCCGCGGTAGAGAGGGCATGCCCAA 404
| || ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 360 CAGCCCGAGGATTTCCAGTGATTGATAGAATGAAAGCTGCGGTGGAGAGGGCATGCCCAA 419
Query 405 GAACCGTTTCGTGCGCAGATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAG 464
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 420 GAACCGTTTCATGCGCAGATATGCTCACCATTGCTGCTCAACAATCTGTCACTTTGGCAG 479
Query 465 GAGGTCCTTCTTGGAAGGTTCCTTTGGGGAGAAGAGACAGCTTACAAGCATTTCTAAATC 524
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 480 GAGGTCCTTCTTGGAAGGTTCCTTTAGGGAGAAGAGACAGCTTACAAGCATTTCTAGATC 539
Query 525 TCGCTAATGCAAATCTCCCAGCTCCATTCTTCACACTTCCAGAGCTTAAAGCCAACTTCA 584
| ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 540 TTGCTAACGCAAATCTTCCAGCTCCATTCTTCACACTTCCACAGCTTAAAGCCAACTTCA 599
Query 585 AAAAAGTTGGCCTCGATCGTCCTTCTGATCTTGTTGCTCTCTCCGGGGCTCACACATTTG 644
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 600 AAAATGTTGGCCTCGATCGTCCTTCTGATCTTGTTGCGCTCTCCGGGGCTCACACATTTG 659
Query 645 GTAAAAATCAATGTCGATTTATTATGGACCGATTATACAACTTTAGCAACACCGGATTAC 704
||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||
Sbjct 660 GTAAAAATCAATGTCGATTCATTATGGACAGATTATACAACTTTAGCAACACTGGATTAC 719
Query 705 CTGACCCTACACTCAACACGACTTACCTACAAACTCTTCGTGGACAATGTCCTCGCAATG 764
||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||
Sbjct 720 CTGACCCTACACTCAACACTACTTACCTCCAAACTCTTCGTGGTCAATGTCCTCGCAATG 779
Query 765 GTAATCAAAGTGTTTTAGTGGATTTCGATCTGCGTACGCCTTTAGTTTTCGACAACAAAT 824
|||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 780 GTAATCAAAGCGTCTTAGTGGATTTCGATCTGCGTACGCCTTTGGTTTTCGACAACAAAT 839
Query 825 ACTATGTGAATCTCAAAGAGCAAAAAGGTCTTATCCAAAGCGATCAAGAGTTGTTCTCTA 884
||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 840 ACTATGTGAATCTTAAAGAGCAAAAAGGTCTTATCCAGAGCGACCAAGAGTTGTTCTCTA 899
Query 885 GCCCCAATGCCACAGACACGATCCCCTTGGTGAGATCATTTGCTGATGGCACAGAAAAAT 944
||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||| ||| ||
Sbjct 900 GCCCCAATGCCACTGACACAATCCCCTTGGTGAGAGCATATGCTGATGGCACACAAACAT 959
Query 945 TCTTTGATGCGTTTGTGGAGGCAATGAATAGGATGGGAAACATTACACCTACTACAGGAT 1004
|||| |||| || |||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 960 TCTTCAATGCATTCGTGGAGGCAATGAATAGGATGGGAAATATTACACCAACTACAGGAA 1019
Query 1005 CTCAAGGACAAATCAGGTTGAATTGTAGAGTGGTGAACTCCAACTCTCTACTCCATGATG 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 CTCAAGGACAAATCAGGTTGAATTGTAGAGTGGTGAACTCCAACTCTCTACTCCATGATG 1079
Query 1065 TGGTGGAGATAGTTGACTTTGTAAGCTCTATGTGAGAATAGTTAACTCAATATCTGGCGA 1124
||||||| || |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1080 TGGTGGATATCGTTGACTTTGTAAGTTCTATGTGAGAATAGTTGACTCAATATCTGGCGA 1139
Query 1125 CCAGACTATAT-TC----TCAA---G----ATG--AA------ACTTGAGCAGGAGCAGA 1164
||||||||||| | | || | || || |||||||||||||||||
Sbjct 1140 CCAGACTATATGTTAAGATAAATAAGCGGGATCTCAAGTTGTTACTTGAGCAGGAGCAGA 1199
Query 1165 TTGG-T-G-TGT--ATAGTGTCTAATTAGTTCTCTGGTTTTGTTTGATATTGGCCTT-GA 1218
||| | | ||| ||||| || || |||||||||| |||| ||| ||||||||||| ||
Sbjct 1200 TTGTATTGGTGTTTATAGTATCCAAGTAGTTCTCTGTTTTTTTTTTATATTGGCCTTTGA 1259
Query 1219 AAGCGTTTTGTGAATCGGTCTAAG 1242
|||||||||| ||||||||||||
Sbjct 1260 TAGCGTTTTGTTAATCGGTCTAAG 1283
> AT3G49120.1 | Symbols: ATPERX34, PERX34, PRXCB, ATPCB, PRX34
| peroxidase CB | chr3:18207651-18210132 FORWARD LENGTH=1321
Length=1321
Score = 1399 bits (757), Expect = 0.0
Identities = 966/1068 (90%), Gaps = 10/1068 (1%)
Strand=Plus/Plus
Query 67 CACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCGTGCGTCTCTGTCCGATGC 126
||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||
Sbjct 198 CACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCATGCATCTTTGTCCGCTGC 257
Query 127 TCAACTTACCCCTACCTTCTACGACACTTCATGTCCTAACGTCACCAACATTGTAAGAGA 186
|||||| ||||||||||||||||| | ||||||||||| ||||| ||||| ||| ||||
Sbjct 258 TCAACTCACCCCTACCTTCTACGATAGGTCATGTCCTAATGTCACTAACATCGTACGAGA 317
Query 187 TACCATTGTGAACGAGCTAAGATCGGACCCTCGTATCGCCGGGAGCATCCTTCGTCTTCA 246
|||||||| || ||| |||| ||||||||||||||||| | ||||||||||||||||||
Sbjct 318 AACCATTGTAAATGAGTTAAGGTCGGACCCTCGTATCGCTGCGAGCATCCTTCGTCTTCA 377
Query 247 CTTCCACGACTGCTTTGTTAATGGTTGTGACGCATCCATCTTGTTAGACAACACGACATC 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 378 CTTCCACGACTGCTTTGTTAATGGTTGTGACGCATCCATCTTGTTAGACAACACGACATC 437
Query 307 ATTTCAGA-CAGAGAAAGATGCGCTTGGAAACGCAAATTCGGCTCGAGGATTTCCTGTGA 365
||||| || |||||||||||||| |||||||||||||||||||||| |||||||| ||||
Sbjct 438 ATTTC-GAACAGAGAAAGATGCGTTTGGAAACGCAAATTCGGCTCGGGGATTTCCAGTGA 496
Query 366 TTGATAGAATGAAAGCCGCGGTAGAGAGGGCATGCCCAAGAACCGTTTCGTGCGCAGATA 425
|||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 497 TTGATAGAATGAAAGCTGCGGTGGAGAGGGCATGCCCAAGAACCGTTTCATGCGCAGATA 556
Query 426 TGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAAGGTTC 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 557 TGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAGGGTTC 616
Query 486 CTTTGGGGAGAAGAGACAGCTTACAAGCATTTCTA-AATCTCGCTAATGCAAATCTCCCA 544
||||||| || |||||||| ||||||||||| || || ||||||||||||||||| |||
Sbjct 617 CTTTGGGAAGGAGAGACAGTTTACAAGCATTCCTGGAA-CTCGCTAATGCAAATCTTCCA 675
Query 545 GCTCCATTCTTCACACTTCCAGAGCTTAAAGCCAACTTCAAAAAAGTTGGCCTCGATCGT 604
||||||||||| ||||||||| | |||||||||| ||||| ||| ||||| |||||||||
Sbjct 676 GCTCCATTCTTTACACTTCCACAACTTAAAGCCAGCTTCAGAAATGTTGGTCTCGATCGT 735
Query 605 CCTTCTGATCTTGTTGCTCTCTCCGG-GGCTCACACATTTGGTAAAAATCAATGTC-GAT 662
||||||||||| |||||||||||||| || |||||||||||||||||||||||||| | |
Sbjct 736 CCTTCTGATCTCGTTGCTCTCTCCGGTGG-TCACACATTTGGTAAAAATCAATGTCAG-T 793
Query 663 TTATTATGGACCGATTATACAACTTT-AGCAACACCGGATTACCTGACCCTACACTCAAC 721
||||| | ||| |||||||||| ||| |||||||| || ||||| |||||||||||||||
Sbjct 794 TTATTCTTGACAGATTATACAA-TTTCAGCAACACAGGTTTACCCGACCCTACACTCAAC 852
Query 722 ACGACTTACCTACAAACTCTTCGTGGACAATGTCCTCGCAATGGTAATCAAAGTGTTTTA 781
|| |||||||| |||||||||||||||| ||| || | ||||| |||| ||||| ||
Sbjct 853 ACTACTTACCTCCAAACTCTTCGTGGACTATGCCCCCTTAATGGCAATCGAAGTGCCTTG 912
Query 782 GTGGATTTCGATCTGCGTACGCCTTTAGTTTTCGACAACAAATACTATGTGAATCTCAAA 841
|| ||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 913 GTAGATTTTGATCTACGTACGCCTACGGTTTTCGACAACAAATACTACGTGAATCTCAAA 972
Query 842 GAGCAAAAAGGTCTTATCCAAAGCGATCAAGAGTTGTTCTCTAGCCCCAATGCCACAGAC 901
|||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct 973 GAGCGAAAAGGTCTTATCCAGAGCGACCAAGAGTTGTTCTCTAGCCCCAATGCCACTGAC 1032
Query 902 ACGATCCCCTTGGTGAGATCATTTGCTGATGGCACAGAAAAATTCTTTGATGCGTTTGTG 961
|| ||||||||||||||| ||| ||||||||||||| ||| |||||| |||| ||||||
Sbjct 1033 ACAATCCCCTTGGTGAGAGCATATGCTGATGGCACACAAACATTCTTCAATGCATTTGTG 1092
Query 962 GAGGCAATGAATAGGATGGGAAACATTACACCTACTACAGGATCTCAAGGACAAATCAGG 1021
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct 1093 GAGGCAATGAATAGGATGGGAAACATTACACCAACTACAGGAACTCAAGGACAAATCAGA 1152
Query 1022 TTGAATTGTAGAGTGGTGAACTCCAACTCTCTACTCCATGATGTGGTGGAGATAGTTGAC 1081
||||| |||||||| ||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 1153 TTGAACTGTAGAGTTGTGAACTCCAACTCTCTGCTCCATGATGTGGTGGATATCGTTGAC 1212
Query 1082 TTTGTAAGCTCTATGTGAGAATAGTTAACTCAATATCTGGCGACCAGA 1129
||||| |||||||||||||||| ||| || |||||| |||| || |||
Sbjct 1213 TTTGTTAGCTCTATGTGAGAATTGTTTACCCAATATGTGGCTACAAGA 1260
> AT3G32980.1 | Symbols: | Peroxidase superfamily protein | chr3:13526097-13529997
REVERSE LENGTH=1414
Length=1414
Score = 966 bits (523), Expect = 0.0
Identities = 873/1042 (84%), Gaps = 24/1042 (2%)
Strand=Plus/Plus
Query 68 ACTTGGACAATCTTAATCACATTGGGATGTCTTATGCTTCGTGCGTCTC-TGTCCGA-TG 125
|||||||||| | |||| |||||||| |||||| |||||| | | || | | ||| | ||
Sbjct 76 ACTTGGACAACCCTAATGACATTGGGTTGTCTTCTGCTTCATTCATC-CATTTCC-AGTG 133
Query 126 CTCAACTTACCCCTACCTTCTACGACACTTCATGTCCTAA-CGTCACCAACATTGTAAGA 184
|||| || ||||| || ||||| |||| | ||||||| || |||| | ||| ||| |
Sbjct 134 CTCAGCTAACCCCAACTTTCTATGACAATACATGTCC-AAGCGTCTTTACCATCGTACGG 192
Query 185 GATACCATTGTGAACGAGCTAAGATCGGACCCTCGTATCGCCGGGAGCATCCTTCGTCTT 244
|||||||| || ||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct 193 GATACCATAGTAAACGAGCTAAGATCGGATCCTCGTATCGCTGCAAGCATCCTTCGTCTT 252
Query 245 CACTTCCACGACTGCTTT-GTTAATGGTTGTGACGCATCCATCTTGTTAGACAACACGAC 303
|||||||||||||| ||| || ||||| ||||| ||||| ||| ||||||||||||| ||
Sbjct 253 CACTTCCACGACTG-TTTCGTCAATGGCTGTGATGCATCGATCCTGTTAGACAACACAAC 311
Query 304 ATCATTTCAGA-CAGAGAAAGATGCG-CTTGGAAACGCAAATTCGGCTCGAGGATTTCCT 361
||| |||| || |||||||||||||| || ||||||||| |||||||||||||||||
Sbjct 312 ATCCTTTC-GAACAGAGAAAGATGCGGCTCC-AAACGCAAACTCGGCTCGAGGATTTCCA 369
Query 362 GTGATTGATAGAATGAAAGCCGCGGTAGAGAGGGCATGCCCAAGAACCGTTTCGTGCGCA 421
||||| |||||||||||||| || ||||||| ||||| ||||| || ||||| ||||||
Sbjct 370 GTGATCGATAGAATGAAAGCAGCAGTAGAGACAGCATGTCCAAGGACTGTTTCATGCGCA 429
Query 422 GATATGCTCACCATTGCAGCTCAACAATCTGTCACTTTGGCAGGAGGTCCTTCTTGGAAG 481
||||| || ||||| |||||||||||| |||| | ||||||||||||||||||||||| |
Sbjct 430 GATATACTTACCATCGCAGCTCAACAAGCTGTAAATTTGGCAGGAGGTCCTTCTTGGAGG 489
Query 482 GTTCCTTTGGGGAGAAGAGACAGCTTACAAGCATT-TCTAAATCTCGCTAATGCAAATCT 540
|||||||||||||||||||| |||||||||||||| | | |||||||||| |||||||
Sbjct 490 GTTCCTTTGGGGAGAAGAGATAGCTTACAAGCATTCTTTGC-TCTCGCTAATACAAATCT 548
Query 541 -CCCAGCTCCATTCTTCACACTTCCAGAGCTTAAAGCCAACTT-CAAAAAAGTTGGCCTC 598
||| |||||||||||||| || ||| | ||||| |||| || ||||| ||||| ||
Sbjct 549 TCCC-GCTCCATTCTTCACTCTCCCACAACTTAAGGCCAGTTTTCAAAAT-GTTGGACTT 606
Query 599 GATCGTCCTTCTGATCTTGTTGCTCTCTCCGG-GGCTCACACATTTGGTAAAAATCAATG 657
|| ||||| |||||||| ||||| ||||| || || |||||||||||||||||| || ||
Sbjct 607 GACCGTCCCTCTGATCTCGTTGCACTCTCTGGTGG-TCACACATTTGGTAAAAACCAGTG 665
Query 658 TCGATTTATTATGGACCGATTATACAACTTTAGCAACACCGGATTACCTGACCCTACACT 717
| |||||||||||| || ||||||||||||||||||| || ||||| |||||||| ||
Sbjct 666 CCAATTTATTATGGATAGACTATACAACTTTAGCAACACTGGTTTACCCGACCCTACTCT 725
Query 718 CAACACGACTTACCTACAAACTCTTCGTGGACAATGTCCTCGCAATGGTAATCAAAGTGT 777
|| || || ||||| || || ||||||||||||||||| ||||||||||| || | ||
Sbjct 726 TAATACTACATACCTCCAGACACTTCGTGGACAATGTCCCCGCAATGGTAACCAGACCGT 785
Query 778 TTTAGTGGATTTCGATCTGCGTACGCCTTTAGTTTTCGACAACAAATACTATGTGAATCT 837
||||| ||||||||||| || || || ||||| ||||| |||||||||||||||||
Sbjct 786 CTTAGTTGATTTCGATCTACGCACACCGACGGTTTTTGACAATAAATACTATGTGAATCT 845
Query 838 CAAAGAGCAAAAAGGTCTTATCCAAAGCG-ATCAAGAGTTGTTCTCTAGCCCCAATGCCA 896
||||||| ||| || |||||||| | || ||||||||||||| || ||||| |||||||
Sbjct 846 GAAAGAGCTAAAGGGACTTATCCAGA-CGGATCAAGAGTTGTTTTCCAGCCCTAATGCCA 904
Query 897 CAGACACGATCCCCTTGGTGAGATCATTTGCTGATGGCACAGAAAAATTCTTTGATGCGT 956
| ||||| ||||||||||||||| || ||||||||||| |||||||||| |||| |
Sbjct 905 CTGACACAATCCCCTTGGTGAGAGAATACGCTGATGGCACTCAAAAATTCTTCAATGCTT 964
Query 957 TTGTGGAGGCAATGAATAGGATGGGAAACATTACACCTACT-ACAGGATCTCAAGGACAA 1015
||||||| ||||||||||| |||||||||||||||||| || || ||| |||||||||||
Sbjct 965 TTGTGGAAGCAATGAATAGAATGGGAAACATTACACCT-CTCACTGGAACTCAAGGACAA 1023
Query 1016 ATCAGGTTGAATTGTAGAGTGGTGAACTCCAACTCTCTACTCCATGATGTGGTGGAGATA 1075
||||| ||||||||| ||||| ||||||||||| || || ||||||||||| || ||
Sbjct 1024 ATCAGACAGAATTGTAGGGTGGTTAACTCCAACTCGCTGCTACATGATGTGGTCGAAATC 1083
Query 1076 GTTGACTTTGTAAGCTCTATGT 1097
||||||||||| ||||||||||
Sbjct 1084 GTTGACTTTGTCAGCTCTATGT 1105
> AT1G68850.1 | Symbols: | Peroxidase superfamily protein | chr1:25883616-25885247
REVERSE LENGTH=1271
Length=1271
Score = 54.7 bits (29), Expect = 2e-06
Identities = 50/60 (83%), Gaps = 2/60 (3%)
Strand=Plus/Plus
Query 237 TTCGTCTTCACTTCCACGACTGCTTTGTT-AATGGTTGTGACGCATCCATCTTGTTAGAC 295
|||||||||||||||||||||||||||| || || ||||| | ||| | ||| |||||
Sbjct 264 TTCGTCTTCACTTCCACGACTGCTTTGTCCAA-GGATGTGATGGATCGGTGTTGCTAGAC 322
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61043862720
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5