BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485271
Length=3331
Score E
Sequences producing significant alignments: (Bits) Value
AT3G33035.1 | Symbols: | transposable element gene | chr3:1357... 4041 0.0
AT2G12390.1 | Symbols: | transposable element gene | chr2:4997... 3616 0.0
AT4G07760.1 | Symbols: | transposable element gene | chr4:4567... 3378 0.0
AT5G32521.1 | Symbols: | transposable element gene | chr5:1217... 2313 0.0
AT2G11590.1 | Symbols: | transposable element gene | chr2:4635... 1648 0.0
AT2G11550.1 | Symbols: | transposable element gene | chr2:4626... 1208 0.0
AT5G32487.1 | Symbols: | transposable element gene | chr5:1211... 1074 0.0
AT2G14970.1 | Symbols: | transposable element gene | chr2:6457... 1040 0.0
AT5G28526.1 | Symbols: | transposable element gene | chr5:1051... 1033 0.0
AT1G40109.1 | Symbols: | transposable element gene | chr1:1515... 1022 0.0
AT3G32950.1 | Symbols: | transposable element gene | chr3:1349... 1013 0.0
AT4G08060.1 | Symbols: | transposable element gene | chr4:4924... 990 0.0
AT1G36630.1 | Symbols: | transposable element gene | chr1:1384... 531 2e-149
AT1G41930.1 | Symbols: | transposable element gene | chr1:1568... 525 1e-147
AT1G42150.1 | Symbols: | transposable element gene | chr1:1574... 307 4e-82
AT5G28524.1 | Symbols: | transposable element gene | chr5:1050... 231 2e-59
AT5G32825.1 | Symbols: | transposable element gene | chr5:1235... 172 2e-41
AT2G06902.1 | Symbols: | transposable element gene | chr2:2803... 139 2e-31
> AT3G33035.1 | Symbols: | transposable element gene | chr3:13576128-13579562
REVERSE LENGTH=3435
Length=3435
Score = 4041 bits (2188), Expect = 0.0
Identities = 3059/3456 (89%), Gaps = 154/3456 (4%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3435 TCAATAGATGACAAACTTATCCATTGGCCATGCAATAGATGAACCAAGTGAATCTCTCAT 3376
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120
||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 3375 ATAATCGATTTCATCTGATGCCCTCCAAACTGTTGCATCATCTATTTTCACTATATCCAC 3316
Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180
||||||||||||| ||||||| ||||||||||||| |||||||||| ||||||||||||
Sbjct 3315 CCAAACTCTAGCTACATTAGCTCCCAAGCGAACATTGTGTACCTTTTGGTCTGGGTCGAC 3256
Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240
|| |||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||
Sbjct 3255 TGGATGCACACGTCCTTTAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACA 3196
Query 241 CTTCTGATTGGCCTTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAAC 300
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 3195 CTTCTGATTGGCCTTGATAACTTCAGCTACACCTTTACGCTGCCATGTTACAATATAAAC 3136
Query 301 CAGGTTTAATGCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAATA 360
||| ||||||| |||||||||||||| ||||||||||| |||| ||||| ||||||||||
Sbjct 3135 CAGTTTTAATGTATGTAGAAAAATAATCAGATTCAATACGTAATAACAACAAACAAAATA 3076
Query 361 CCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACT 420
||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||
Sbjct 3075 CCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGTTGAATTTTCTTGACAAGAGACT 3016
Query 421 TTGAACCTGTAGCTGTGGACTTCTCAGCTAGAG-CTTTTGAAACTGTTGCAACGGATTTT 479
|||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||
Sbjct 3015 TTGAACCTGTAGCTGTGGACTTCTTAGCTA-TGCCCTTTGAAACTGTTGCAACGGATTTT 2957
Query 480 GTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctgcagtttgtgaa 539
|||| ||||| ||||||||||||| ||||||||||||||||| ||| |||||||||||||
Sbjct 2956 GTACTTTTTGCTGTAGATATCTCAGGGGATGGCTTATAACCTACTGTTGCAGTTTGTGAA 2897
Query 540 cctgatcctgctgctttccct-ga---tgctgc--t-gctga---tgctg-c-tg-ct-- 584
|||||| |||||||||| ||| || |||||| | |||| ||||| | || ||
Sbjct 2896 CCTGATGCTGCTGCTTT-CCTGGACGCTGCTGCTTTCTCTGATCCTGCTGACTTGCCTAC 2838
Query 585 t--t-c--c---c-tg----ctgatgctgctgattttcctactgatgctgctgctTCCAA 631
| | | | | || |||||||||| || || ||||| |||||| ||||||||||
Sbjct 2837 TGATGCTGCTGACTTGCCTACTGATGCTGCCGACTTGCCTACCGATGCTACTGCTTCCAA 2778
Query 632 TGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGACATGTTGCATCTGT 691
|||||||||||||||||| |||||| | |||||||||||| | || |||||||||||||
Sbjct 2777 TGGTGATTTTCCTCTTGCCGCAGAATTGTGAAGTGGAGATATGTGGCATGTTGCATCTGC 2718
Query 692 ATGGTTTTCAAAGATCACTTTGTGGACAGGCCAT-GCTACATAAGACATTAAACAGTCCT 750
| ||||||||||||| ||||||| |||||||||| | | |||| ||||||||||||||
Sbjct 2717 AGGGTTTTCAAAGATAACTTTGTTGACAGGCCATGGAAAGGTAAGTCATTAAACAGTCCT 2658
Query 751 CAAAGTATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCAT 810
||| ||| |||||||||||||||| |||||||||||| |||||||||||||||| |||||
Sbjct 2657 CAAGGTAAGTCACATCCATCGTTGACCTCCATATAAATGTCTCTGGTTGAAGAATTGCAT 2598
Query 811 CGACAAATATCTTTACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGCGTTGTGTT 870
||||| ||||||| ||| || || ||||||||| ||||||||||||||| || ||||
Sbjct 2597 CGACATATATCTTCACTATTGGAGGTCCGAGAGGATTCCCATTGACTAATGCATTTTGTT 2538
Query 871 CTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATCCAGTAGTT 930
|||||||||||||||||||||||||||||||||| |||| |||||||||||| | || |
Sbjct 2537 CTTGTGTCTGCCAACGTCCTTCTGCAACAACAACATCATTTGAAGACAAATCAAAAAGCT 2478
Query 931 TGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTTAAT 990
||||||||| | ||||||||| ||||||| |||||||||| ||||||||| |||||||
Sbjct 2477 GGCATTTGTT-ATTTGGTCCCTGTCAAAAATATTGAAACCCGGAAATACATTATGTTAAT 2419
Query 991 AGAAGATCATTATTCTATATATGAGTATGAGAATGAATAATAAACTTTACCTGGGCTTCA 1050
|||||||||||| |||||||||||| |||||| ||||||||||||||||||||| || ||
Sbjct 2418 AGAAGATCATTACTCTATATATGAGAATGAGACTGAATAATAAACTTTACCTGGCCTACA 2359
Query 1051 ATGTCTTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCAATC 1110
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2358 ATGTCTTCTTATTGGAGATCCTCTTCTAGGCTAACACACATAGCAGCAGGCCATGCAATC 2299
Query 1111 ATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAATGCT 1170
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2298 ATATGTTCAACGGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAATGCT 2239
Query 1171 TCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAGTCA 1230
|||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct 2238 TCTGGTTCAATATCAGTGTCAATCAAGACTTTAACATCGGTAGGACCTAAGCGACAGTCA 2179
Query 1231 TTAACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATTA-GA 1289
|| |||||||||||| ||||| ||| |||||||||||||||||||| |||| ||| | ||
Sbjct 2178 TTCACTAATTCACCCAGATCATAAGGAATAATACATCCCTCAGCAATTTTTGCAT-ACGA 2120
Query 1290 ACCAGCCCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGTAAAA 1348
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 2119 ACCAGCCCAATCAAGTAAGACACATTTTGGTTGTG-TCCTTTTGTTCACACTCTGTAAAA 2061
Query 1349 -ACAATAGGTAGACAAAATATCAGGTGATTGTATCTGTTAGAATAAATCAAAGCATCTGA 1407
| || || |||||||| ||| | |||| ||||||||||||| |||||||||||| |||
Sbjct 2060 GAAAA-AGATAGACAAAGTATTAAGTGAGTGTATCTGTTAGAGCAAATCAAAGCATATGA 2002
Query 1408 TATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTGTTAC 1467
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 2001 TATGAGTGACTTACTCTTGAAGCTGAGTTTTCACCTACTTCAGGTGATTGTATCTGTTAC 1942
Query 1468 aaaaa-a-aaaGA-AAAG--AA-------GT-C-AA---A--TGT---T----ATATATA 1501
||||| | ||| | |||| || || | || | ||| | |||||||
Sbjct 1941 AAAAAGAGAAAAACAAAGTCAAATCTTATGTACTAATTGAGCTGTAAGTCTTTATATATA 1882
Query 1502 AATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCATTGA 1561
||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1881 AATAGATAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTATTTCTTGTAGCTCATTGA 1822
Query 1562 CCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCACTT 1621
||||||| || ||| |||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1821 CCTTCTTTTGTAGACGAAGCTGATTCTCTAGCATTTCAGTCATACACTTGTGCTTCACTT 1762
Query 1622 GGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACC-A--- 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1761 GGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCTACCA 1702
Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737
|||||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||
Sbjct 1701 GGATTGTCAGGCCCTAACAGTTACCGTAGTGAATCTTGTGCTTCATTTGTTG-ATG-GAT 1644
Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAA 1797
| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 1643 ---T-ATCATTGTTAACAATCTCTTCTGCCTTTTTCTGAAACTCATAAGATACATTTTAA 1588
Query 1798 AATATCAAGTGTGATTCAAA-TGCCAAAATGCAAATCATT-AGAAGCAAAATAACTCACA 1855
|||||||||||||||||||| ||||||||||||||||| | || ||||||||||||||
Sbjct 1587 AATATCAAGTGTGATTCAAAATGCCAAAATGCAAATCAAACAAAA-CAAAATAACTCACA 1529
Query 1856 ATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACC 1915
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1528 ATCTTTTCAGCAGCATTCGTATTCACTTGTGTACCATCTTTCTTAGTACGTGACTTAACC 1469
Query 1916 CAAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC-AAAAAA 1974
||||||||||| | ||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1468 CAAACCTTTAGCCTTGTCACTTCAGATGGGTCTGCACTACCAGTTTTCTAAACCAAAAAA 1409
Query 1975 -T-A-C--A-------CA-A-GTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAA 2020
| | | | || | ||||||||||||||| |||||||||||||||||||||||
Sbjct 1408 ATGATCTCAGTTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAA 1349
Query 2021 TATAAGTGT--AGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTA 2077
||||||||| | ||| | ||||||| ||||| || ||||||||||||||||||||||||
Sbjct 1348 TATAAGTGTGTA-CAAGTTTTACCATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTA 1290
Query 2078 CAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 2137
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1289 CAAGTGTGTGAAATCTGATTGCGCCTTCTTTCCTTGTGGCTATCGCTTACAACCTAACAG 1230
Query 2138 ATGAATGTTAATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTT 2197
||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||
Sbjct 1229 ATGAATGTTAATTTCTATTGTA---TATAGATAAATTTACAAATTCCAAATGCATAGCTT 1173
Query 2198 AAATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTT 2257
|||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1172 AAATTCTTGGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAAAGGAGAAATGTTTTT 1113
Query 2258 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 2317
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1112 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTGGCCT 1053
Query 2318 TGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTC 2377
|||||||||||| |||||||| ||||||||| || |||||| ||||||||||||||||||
Sbjct 1052 TGATTTCCAGGAGCTCCACAAACATCCCATCCGCCTAAGCAATGTAACCTTTTGGTACTC 993
Query 2378 TTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACAAAACAGCTAAGTACTCACACCAAT 2437
|||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| | |||
Sbjct 992 TTCATCTAGTTCAAACCTTGTTTGCAATCAAAAACAAAGCAGTTAAGTACTCAC-C-AAT 935
Query 2438 ATATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGTC 2497
|| |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct 934 ATCTAATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACAGTC 875
Query 2498 CTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACC 2557
|||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 874 CTGAGTTCTTCACCAATTTTAGTCCAACGTTCAATTGTGATTGGAACGTGTTCTCTTACT 815
Query 2558 AATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTA 2617
||||| |||||| ||| ||| || ||||||||||||||| |||||| |||||||||||||
Sbjct 814 AATGCCCCTACAAATGCTGCCAGCTTAACTGAGCCTTTATCAATAGACTCTCCCATGTTA 755
Query 2618 GTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGT 2677
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 754 CTGAACTCTACTCTTACTCTCGCATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGT 695
Query 2678 CCTCGATGTCTCTTACGCTTTGGATCAGCACAATCATAATCCTCAGATAATACAAGCTCT 2737
||||||||||||||||||||||| ||| || | |||| | |||||||||| |||||||||
Sbjct 694 CCTCGATGTCTCTTACGCTTTGGCTCAACATATTCATGACCCTCAGATAAAACAAGCTCT 635
Query 2738 CCTTCAGCCTCTTCCAC-TTGA--TT-T--GGATCTGC-T-A-CT---TGAACT---TCA 2782
|||| || |||||| | |||| || | |||||| | | | | ||| || ||
Sbjct 634 CCTTAAGGTTCTTCCTCATTGACCTTATCCGGATCTCCATCAACCACCTGATCTGGATCT 575
Query 2783 GC--CT----CT--T-CCACTTGATCTGGATC-TGC---T-ACTTGAATCTGCTACTTGA 2828
|| || || | ||| |||||| | | | | | | ||| ||||| |||||||
Sbjct 574 GCTACTTGATCTGGTTCCAAATGATCTTCACCATTCACCTTATTTGCATCTGATACTTGA 515
Query 2829 ACTTCAGCTGGTGCTACATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATA 2888
|||||||||||| |||||||||| | |||||||||||||||||||||| |||||| |||
Sbjct 514 ACTTCAGCTGGTTCTACATGTTC--C-TCATCATTGACTTGTGGTTCAATTGTACCAATA 458
Query 2889 TACTCGACCTCCTCATTGGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGC 2945
||||||||||| |||||| ||| |||||| || ||||||||| ||||||||| | ||||
Sbjct 457 TACTCGACCTCATCATTGACATTCTTTGCATTGACCTTTTTTT-GTTACTTCTACCTCGC 399
Query 2946 TTTTTCTTCTGTTGTCCCATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAA 3004
||||||||||||||||||| |||||||||||||||||||||||||| | |||| |||||
Sbjct 398 CTTTTCTTCTGTTGTCCCATCTTAAATCACCTGAGAAAAATGAAAGA-GTAAAGGGTTAA 340
Query 3005 GTATATACTGAA--A-ATAAGACATCAAACACACTATGG-AAATCAGACATCAGACATAG 3060
||| | | || | ||||||||| |||||||| ||| ||| ||||||| | ||||||
Sbjct 339 GTACAC-CGGATGCAGATAAGACATTGAACACACTGTGGGAAA-CAGACATAAAACATAG 282
Query 3061 AGCAGGCAACAAAGAATGAAAATGATa-aaaaaaaa-CTACATTTCACAAACATATATCC 3118
|| || |||||| |||||||||||| | |||||||| ||||||||||||||||||||| |
Sbjct 281 AGAAGACAACAAGGAATGAAAATGAAACAAAAAAAAACTACATTTCACAAACATATATTC 222
Query 3119 CTTCACAATCAGATC-TCTCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTT 3177
|||||||||||| || ||||||||||||| |||||||||||| |||| ||||||| ||||
Sbjct 221 CTTCACAATCAG-TCCTCTCATTCTCAGCGTCATCCAAGTCAGCGTCTATGTCAACATTT 163
Query 3178 GGTGGCAATGTGCCAATGTCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTT 3237
||||| |||||||||||| |||||| ||||| || |||||||||||||| ||||||||||
Sbjct 162 GGTGGGAATGTGCCAATGGCTGCAATTGAATATACAAACTCTTTCTGACAGAATCTTCTT 103
Query 3238 GAAGGA-CCTCTCAATGCAACATACCAAGGTGATGAGTCATCTTCCCTTAGGT-AAAACA 3295
|||| | ||||||||||||||||||||||||| |||||||||||| ||||||| |||| |
Sbjct 102 GAAG-ATCCTCTCAATGCAACATACCAAGGTGTTGAGTCATCTTCTCTTAGGTTAAAA-A 45
Query 3296 CTTGTTTTGCTTGAGAGGCTAGTATATACGGATCCC 3331
||||||||||||||||||||||||| ||||||||||
Sbjct 44 CTTGTTTTGCTTGAGAGGCTAGTATGTACGGATCCC 9
> AT2G12390.1 | Symbols: | transposable element gene | chr2:4997453-5001918
FORWARD LENGTH=4466
Length=4466
Score = 3616 bits (1958), Expect = 0.0
Identities = 2567/2844 (90%), Gaps = 110/2844 (4%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
|||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 4466 TCAATAGATGACCATCTTATCCATTCGCCATGCAATAGATGAACCAAGTGAATCTCTCAT 4407
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 4406 ATACTCGATTTCATCTGATGCCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 4347
Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 4346 CCAAACTCTAGCTGCATTATTTCCCAAGCGAACATGGTGTACCTTTTGGTCTGGGTCGAC 4287
Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 4286 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACA 4227
Query 241 CTTCTGATTGGCCTTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAAC 300
|||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct 4226 CTTCTGATTGGCCTTGATAACTTCAGCTACACCTTTATGCTGCCATGTTACAATATAAAC 4167
Query 301 CAGGTTTAATGCATGTAGAAAAATAACCAGATTC-A-A--TAGGTAAAAACAATAAACAA 356
||| ||||||| ||| ||||||||||||| |||| | | ||||||| ||||| | ||||
Sbjct 4166 CAGTTTTAATGTATGCAGAAAAATAACCATATTCAATAGCTAGGTAATAACAACATACAA 4107
Query 357 AATACCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAA 416
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4106 AATACCGGAGATCTACTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAGGA 4047
Query 417 GACTTTGAACCTGTAGCTGTGGACTTCTCAGCTA-GAGCTTTTGAAACTGTTGCAACGGA 475
|||||||||||| ||||| ||||||||||||||| | || ||||||||||||||||||||
Sbjct 4046 GACTTTGAACCTTTAGCTATGGACTTCTCAGCTATG-GCCTTTGAAACTGTTGCAACGGA 3988
Query 476 TTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctgcagtttg 535
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3987 TTTTGTACCTTTTGCTGTAGATATCTCAGGGGATGGCTTATAACCTGCTGCTGCAGTTTG 3928
Query 536 tgaacctgatcctgctgctttccctga---tgctgc-tgct--gatgctgctg-ctt--- 585
||||| |||| ||||||||||||| || | |||| | || ||| |||||| |||
Sbjct 3927 TGAACTTGATGCTGCTGCTTTCCCGGACGCTACTGCTTTCTCGGATCCTGCTGACTTGCC 3868
Query 586 t-c----cctgctga--tg-ctgctgat--t------tt-cctactgatgctgctgctTC 628
| | |||||||| || || ||||| | || |||||| ||| |||||||||
Sbjct 3867 TACTGATCCTGCTGACTTGCCTACTGATGCTGCAAACTTGCCTACTAATGTTGCTGCTTC 3808
Query 629 CAATGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGACATGTTGCATC 688
|||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||
Sbjct 3807 CAATGGTGATTTTCCTCTGGCAGCAGAAGTCTAAAGTGGAGATTTCTGCCATGTTGCATC 3748
Query 689 TGTATGGTTTTCAAAGATCACTTTGTGGACAGGCCATGCTACATAAGACATTAAACAGTC 748
|| | ||||||||||||| ||||||| || ||||||||| ||| ||||||||||||||||
Sbjct 3747 TGAAGGGTTTTCAAAGATAACTTTGTTGATAGGCCATGCAACAAAAGACATTAAACAGTC 3688
Query 749 CTCAAAG-TATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTG 807
||| ||| || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3687 CTC-AAGATAAGTCACATCCATCGTTGGCCTCCATATAAACGTCTCTGGTTGAAGAACTG 3629
Query 808 CATCGACAAATATCTTTACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-GTTG 866
|||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||
Sbjct 3628 CATCGACAAATATCTTCACTGCTGCAGGTCCGAGAGGAAGCCCATTGACTAATGCATTTG 3569
Query 867 TGTTCTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATCCAGT 926
||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||
Sbjct 3568 -GTTCTTGGGTCTGCCCACGTCCTTCTGCAACAACAA-CTCATTTGAAGACAAATCCAAA 3511
Query 927 AGTTTGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGT 986
|| | ||||||||| | ||||||||||||||||||||||||||||| |||| |||| |||
Sbjct 3510 AGCTGGCATTTGTT-ATTTGGTCCCTATCAAAAACATTGAAACCCAGAAATTCATTATGT 3452
Query 987 TAATAGAAGATCATTATTC-TATATATGAGTATGAGAATGAATAATAAACTTTACCTGGG 1045
|||||||||||||||| || || ||||||| |||||| |||||||||||||||||||||
Sbjct 3451 TAATAGAAGATCATTACTCTTA-ATATGAGAATGAGACTGAATAATAAACTTTACCTGGC 3393
Query 1046 CTTCAATGTCTTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATG 1105
|| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3392 CTGCATTGTCTTCTTGTTGGAGATCCTCTTCTAGGCTAACACACATAGCAGCAGGCCATG 3333
Query 1106 CAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGA 1165
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3332 CAATCATATGTCCAACAGCTTTCTCAATGGTGAACATATTAGCCGCAGGTCTCCAAAGGA 3273
Query 1166 ATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGAC 1225
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 3272 ATGCTTCTGGTTCAATAACAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGCGAC 3213
Query 1226 AGTCATTAACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACAT 1285
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3212 AGTCATTCACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTGCAT 3153
Query 1286 TAGAACCAGCCCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGT 1344
||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||
Sbjct 3152 AAGAACCAGCCCAATCAAGTAAGAAACATTTTGGTTGTG-TTCTTTTGTTCACACTCTGT 3094
Query 1345 AAAAACAATAGGTAGACAAAATA-TCAGGTGATTGTATCTGTTAGAATAAATCAAAGCAT 1403
|||| || || |||||||| || | || | | |||||||||||||| | ||||||| ||
Sbjct 3093 AAAAGTAAAAGATAGACAAAGTACTAAGTT-AGTGTATCTGTTAGAACAGATCAAAGTAT 3035
Query 1404 CTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTG 1463
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3034 ATGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGCTGATTGTCTCTG 2975
Query 1464 TTACaaaaaaa-aaGAA-AA-G--AA---GT-----C-AA---A---T---GTT---ATA 1497
||||||||||| || || || | || || | || | | ||| |||
Sbjct 2974 TTACAAAAAAAGAAAAACAAAGTCAAATCGTATGTACTAATTGAGCCTTAAGTTTGTATA 2915
Query 1498 TATAAATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCA 1557
||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 2914 TATAAATAGATAAGTTCACTAACCTGGTTCTTCATTTTTTCAATTACTTCTTGTAGCTCA 2855
Query 1558 TTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTC 1617
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2854 TTGACCTTCTTTTGTAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTC 2795
Query 1618 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCA 1677
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2794 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCAGTCTACCA 2735
Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737
| ||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 2734 GAATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGC--C--G--AT 2681
Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAA 1797
||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| ||||
Sbjct 2680 GGATTATCATTGTTAACAATCTCTTCTGCCTTTTTTTAAAACTCATAAGATACATTTTAA 2621
Query 1798 AATATCAAGTGTGATTCAAA-TGCCAAAATGCAAATCATTA-GAAGCAAAATAACTCACA 1855
|||||||||||||||||||| ||||||||||||||||| | ||| ||||| ||||||||
Sbjct 2620 AATATCAAGTGTGATTCAAAATGCCAAAATGCAAATCAA-ACGAAACAAAACAACTCACA 2562
Query 1856 ATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACC 1915
|||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct 2561 ATCTTTTCAGCAGCATTCGTATTCACTGGTATACCATCCTTCTTAGTATGTGACTTAACC 2502
Query 1916 CAAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC-AAAAAA 1974
||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2501 CAAACCTTTAGCCTTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAACCAAAAAA 2442
Query 1975 T-A-C--A-------CA-A-GTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAAT 2021
| | | | || | ||||||||||||||| ||||||||||||||||||||||||
Sbjct 2441 TGATCTCAGTTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAAT 2382
Query 2022 ATAAGTGT--AGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTAC 2078
|||||||| | ||| | ||||||| ||||| || ||||||| |||||||||||||||||
Sbjct 2381 ATAAGTGTGTA-CAACTGTTACCATGTCTTCGGCAAGTCTAAGCATTCCCCTGCGACTAC 2323
Query 2079 AAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGA 2138
||| | |||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 2322 TAGTATTTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCACTTACAACCTAACAAA 2263
Query 2139 TGAATGTTAATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTTA 2198
|||||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct 2262 TGAATGTTAATTTCTATTGTA---TATAGATAAATTTACAAATTCCAAATGCATACCTTA 2206
Query 2199 AATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTTA 2258
|| |||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||
Sbjct 2205 AACTCTTGGCTAGTTTTGAGCTTCACAAACTTACGCCAATCAAAAGGAGAAATGTTTTTA 2146
Query 2259 GGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTT 2318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2145 GGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTT 2086
Query 2319 GATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTCT 2378
|||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||||||
Sbjct 2085 GATTTCCAGGACCTCCACAAACATCCTATCTGCCTAAGCACTATAACCTTTTGGTACTCT 2026
Query 2379 TCATCTAGTTCAAACCTTGCCTGC-ACTCAAAAACAAAACAG-CTAAGTACTCACACCAA 2436
|||||||||||||||||||||||| | | ||||||||||||| | |||||||||| | ||
Sbjct 2025 TCATCTAGTTCAAACCTTGCCTGCCA-TAAAAAACAAAACAGTC-AAGTACTCAC-C-AA 1970
Query 2437 TATATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGT 2496
||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 1969 TATCTAATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGACTTCCAGAGAACTGT 1910
Query 2497 CCTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTAC 2556
||||| ||||||||| || || |||||||| |||||||||| || |||||||||||||||
Sbjct 1909 CCTGAGTTCTTCACCAATCTTAGTCCAACGTTCAATTGTGACTGAAACGTGTTCTCTTAC 1850
Query 2557 CAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTT 2616
|||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||
Sbjct 1849 CAATGCCCCTACATATGATGCCAGCTTAACTGAGTCTTTACCAATAGGCTCTCCCATGTT 1790
Query 2617 AGTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGG 2676
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1789 AGTGAACTCTACTCTTACTCTGACATTTGGATCTTTGGCAATATCCTTCAGCCTAGTTGG 1730
Query 2677 TCCTCGATGTCTCTTACGCTTTGGATCAGCACAATCAT-AATCCTCAGATAATACAAGCT 2735
||||||||||| |||||||||||| ||| ||||||||| || | ||||||| |||||||
Sbjct 1729 TCCTCGATGTCGCTTACGCTTTGGCTCAACACAATCATCAA-CAACAGATAAAACAAGCT 1671
Query 2736 CTCCTTCAGCCTCTTCCAC-TTGA 2758
|||| | || ||||||| | ||||
Sbjct 1670 CTCCGTGAGGCTCTTCCTCATTGA 1647
Score = 645 bits (349), Expect = 0.0
Identities = 519/597 (87%), Gaps = 28/597 (5%)
Strand=Plus/Minus
Query 2752 CACTTGATTTGGATCTGCTACTTGAACTTCAGCCTCTTCCACTTGATCTGGATCTGCTAC 2811
||| |||| |||||||||||| ||| | || | || |||| |||||||||||||||||
Sbjct 1573 CACCTGATCTGGATCTGCTACCTGATC-TC--CATCAACCACCTGATCTGGATCTGCTAC 1517
Query 2812 TTGA-----ATCTGCTACTTGAACTTCAGCTGG-TGCTACATGTTCGACCTCATCATTGA 2865
|||| ||||| |||||||||||||||||| || | |||||| ||||||||||||
Sbjct 1516 TTGATCTGCATCTGATACTTGAACTTCAGCTGGTTG-TGCATGTT---CCTCATCATTGA 1461
Query 2866 CTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCATTGGCATGCTTTGC-TT--CCt 2922
|||||||||||| ||| || |||||||| ||||| |||||||||| |||||| || |||
Sbjct 1460 CTTGTGGTTCAATTGTTCCAATATACTCAACCTCATCATTGGCATTCTTTGCATTGACCT 1401
Query 2923 tttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTCCCATTTTAAATCACCTGAGAA 2982
|||||||||||||| | | |||||||| ||||||||||||||| ||||||||||||||||
Sbjct 1400 TTTTTTTGTTACTTTTACCTCGCTTTTGCTTCTGTTGTCCCATCTTAAATCACCTGAGAA 1341
Query 2983 AAATGAAAGAAG-AAAGAGTTAAGTATA-T-ACTGAAAATAAGACATCAAACACACTAT- 3038
||||||||| || |||| |||||||| | | | || |||||||| || ||||||||||
Sbjct 1340 AAATGAAAG-AGTAAAGGGTTAAGTACACTGAATGCAAATAAGAGATTGAACACACTATG 1282
Query 3039 GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAATGAAAATG-A-TaaaaaaaaaC 3096
||||| ||||||||| |||| || | ||||||| ||||||||||| | ||||||||||
Sbjct 1281 GGAAA-CAGACATCAAACATTCAGAATGCAACAAGGAATGAAAATGAAGCAAAAAAAAAC 1223
Query 3097 TACATTTCACAAACATATATCCCTTCACAATCAGAT-CTCTCATTCTCAGCTTCATCCAA 3155
||||||||||||||||| || ||||||||||||| | |||||||||||||||||||||||
Sbjct 1222 TACATTTCACAAACATAAATTCCTTCACAATCAG-TCCTCTCATTCTCAGCTTCATCCAA 1164
Query 3156 GTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCAAT-GTCTGCAACTGAATCTAGAA 3214
|||| |||| ||||||| ||||||||||||||||||||| | ||||||||||||||| ||
Sbjct 1163 GTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCAATCG-CTGCAACTGAATCTACAA 1105
Query 3215 ACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAATGCAACATACCAAGGTGATGAGT 3274
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1104 ACTCTTTCTGACTGAATCTTCTTGAAGAACCTCTCAATGCAACATACCAAGGTGACGAGC 1045
Query 3275 CATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAGGCTAGTATATACGGATCCC 3331
||||||| ||||||||||| || ||||||||||| ||||||||||| |||||| |||
Sbjct 1044 CATCTTCTCTTAGGTAAAAAACATGTTTTGCTTGCGAGGCTAGTATGTACGGACCCC 988
> AT4G07760.1 | Symbols: | transposable element gene | chr4:4567163-4571912
FORWARD LENGTH=4750
Length=4750
Score = 3378 bits (1829), Expect = 0.0
Identities = 2440/2715 (90%), Gaps = 121/2715 (4%)
Strand=Plus/Minus
Query 4 ATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATA 63
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 4750 ATAGATGACCAACTTATCCATTGGTCATGCAATAGATGAACCAAGTGAATCTCTCATATA 4691
Query 64 CTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCA 123
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 4690 CTCGATTTCATCTGATGCCCTCCAAACTGTTGCATCATCTATTTTCACTATATCCACCCA 4631
Query 124 AACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGA 183
|||||||||||||||| | |||||||||||||| ||| |||| |||||||||||| |||
Sbjct 4630 AACTCTAGCTGCATTATCTCCCAAGCGAACATGTTGTTTCTTTTGGTCTGGGTCGACTGA 4571
Query 184 ATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTT 243
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 4570 ATGCACACGTCCTTCAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACACTT 4511
Query 244 CTGATTGGCCTTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAACCAG 303
||||| | |||||||||||||||||||| |||||||||| |||| ||||||| |||||
Sbjct 4510 ATGATTAGTCTTGATAACTTCAGCTACACCTTTACGCTGCCATGTCACAATAT-AACCAA 4452
Query 304 GTTTAATGCATGTAGAAAAATAACCAGATTC-A-A--TAGGTAAAAACAATAAACAAAAT 359
|||||| |||||||||||||||||||||| | | ||||||| ||||| |||||||||
Sbjct 4451 TTTTAATATATGTAGAAAAATAACCAGATTCAAGAGCTAGGTAATAACAACAAACAAAAT 4392
Query 360 ACCGGAGATCTTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGAC 419
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 4391 ACCGGAGATCTTCTCAGATGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAGGAGAC 4332
Query 420 TTTGAACCTGTAGCTGTGGACTTCTCAGCTA-GAGCTTTTGAAACTGTTGCAACGGATTT 478
||||||||| ||||| ||||||||||||||| | || |||||||||||||||||||||||
Sbjct 4331 TTTGAACCTTTAGCTATGGACTTCTCAGCTATG-GCCTTTGAAACTGTTGCAACGGATTT 4273
Query 479 TGTACCTTTTGTTGTAGATATCTCAAG-GGATGGCTTATAAcctgctgctgcagtttgtg 537
||||||||||| |||| ||||||| || ||||||||||||| | |||||||||||||||
Sbjct 4272 TGTACCTTTTGCTGTAAATATCTC-AGAGGATGGCTTATAA-C--CTGCTGCAGTTTGTG 4217
Query 538 aacctgatcctgctgctttccctga---tgctgc-tgc-t-ga---tgctg-c-tg-ct- 584
|||||||| ||||||||||||| || | |||| | | | || ||||| | || ||
Sbjct 4216 AACCTGATGCTGCTGCTTTCCCGGACGCTACTGCTTTCTTGGATCTTGCTGACTTGCCTA 4157
Query 585 -t--tcc------c-tg----ctgatgctgctgattttcctactgatgctgctgctTCCA 630
| ||| | || ||||||||||||| || |||||||||| || ||||||||
Sbjct 4156 GTGATCCTGGTGACTTGCCTACTGATGCTGCTGACTTGCCTACTGATGTTGTTGCTTCCA 4097
Query 631 ATGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGACATGTTGCATCTG 690
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4096 ATGGTGATTTTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGGTATGTTGCATCTG 4037
Query 691 TATGGTTTTCAAAGATCACTTTGTGGACAGGCCATGCTACATAAGACATTAAACAGTCCT 750
| ||||||||||||| ||||||| |||||||||||| ||| ||||||||||||||||||
Sbjct 4036 CAGGGTTTTCAAAGATAACTTTGTTGACAGGCCATGCAACAAAAGACATTAAACAGTCCT 3977
Query 751 CAA-AGTATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCA 809
||| | || || |||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3976 CAAGA-TAAGTTACATTCATCGTTGGCCTCCATATAAACGTCTCTGGTTGAAGAACTGCA 3918
Query 810 TCGACAAATATCTTTACTGCTGC-TGGCCCGAGAGGAAGCCCATTGACTAATGCGTTGTG 868
|||||||||||||| |||||| | || || |||||||||||||||||||||||| || ||
Sbjct 3917 TCGACAAATATCTTCACTGCTACATGTCC-GAGAGGAAGCCCATTGACTAATGCATT-TG 3860
Query 869 -TTCTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATCCAGTA 927
||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| |
Sbjct 3859 GTTCTTGTGTCTACCAACGTCCTTCTGCAACAACAACATCATTTGAAGACAAATCCAAAA 3800
Query 928 GTTTGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTT 987
| | ||||||||| | ||||||||| ||||||||||||||||||| ||||||||| ||||
Sbjct 3799 GCTGGCATTTGTT-ATTTGGTCCCTGTCAAAAACATTGAAACCCAGAAATACATTATGTT 3741
Query 988 AATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATAATAAACTTTACCTGGGCT 1047
||||||||||||||| |||||||||||| |||||| |||||||||||||||||||| |
Sbjct 3740 AATAGAAGATCATTACTCTATATATGAGAATGAGACTGAATAATAAACTTTACCTGA-CA 3682
Query 1048 T-CAATGTCTTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGC 1106
| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 3681 TGCAATGTCTTCTTGTTGGAGATCCTCTTCTAGGCTAAAACACATAGCAGCAGGCCATGC 3622
Query 1107 AATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAA 1166
||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||
Sbjct 3621 AATCATATGTCCAACAGCTTTTTCAATGATGAACATATTAGCCGCAAGTCTCCAAAGGAA 3562
Query 1167 TGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACA 1226
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||
Sbjct 3561 TGCTTCTGGTTCAATAGCAGTGTCAATCAAGAATTTAACATCGGTAGGGCCTAAGCGACA 3502
Query 1227 GTCATTAACTAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATT 1286
|||||| ||||||||| ||||||||||||||||||||||||||| |||||||||| |||
Sbjct 3501 GTCATTCACTAATTCATCCGGATCAGAAGAAATAATACATCCCTTAGCAACTTTTGCATC 3442
Query 1287 AGAACCAGCCCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGTA 1345
||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct 3441 AGAACCAGCCCAATCAAGTAAGAAACATTTTGGTTGTG-TTCTTTTGTTCACACTCTGTA 3383
Query 1346 AAAACAATAGGTAGACAAAATATCAGGTGATTGTATCTGTT-AGAATAAATCAAAGCATC 1404
||| || || || ||| ||||| | || | ||||| ||| |||| ||||||||||||
Sbjct 3382 AAAGTAAAAGATAAACATAATATTAAGTTA--GTATC-GTTTAGAACAAATCAAAGCATA 3326
Query 1405 TGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTGT 1464
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3325 TGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGCTGATTGTCTCTGT 3266
Query 1465 TACaa-aaaa-aaaGA-AAAG--AA-------GT-C-AA---A----T--GT-T--ATAT 1498
||||| |||| ||| | |||| || || | || | | || | ||||
Sbjct 3265 TACAACAAAAGAAAAACAAAGTCAAATCTTATGTACTAATTGAGCCATAAGTCTTTATAT 3206
Query 1499 ATAAATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCAT 1558
|||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 3205 ATAAATAGATAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACTTCTTGTATCTCAT 3146
Query 1559 TGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCA 1618
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3145 TGACCTTCTTTTGTAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTGCA 3086
Query 1619 CTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCAG 1678
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 3085 CTTGGAAACAAGCTAACTTTGTCTTATTCATATTGCGACCCATTGCTCTCAGTCTACCAG 3026
Query 1679 GATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGATG 1738
|||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 3025 GATTATCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTG----ATG--ATG 2972
Query 1739 GATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAAA 1798
|||||||||| ||||||||||| |||||||||||||||||||||||| |||||| |||||
Sbjct 2971 GATTATCACTCTTAACAATCTCTTCTGCCTTTTTCTGAAACTCATAAAATACATTTTAAA 2912
Query 1799 ATATCAAGTGTGATTCAAA-TGCCAAAATGCAAATCATTA-GAAGCAAAATAACTCACAA 1856
||||||||||||||||||| ||||||| ||||||||| | ||| |||||||||||||||
Sbjct 2911 ATATCAAGTGTGATTCAAAATGCCAAAGTGCAAATCAA-ACGAAACAAAATAACTCACAA 2853
Query 1857 TCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACCC 1916
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2852 TCTTTTCAGTAGCATTCGTATTCACTGGTGTAGCATCTTTCTTAGTACGTGACTTAACCC 2793
Query 1917 AAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC-AAAAAA- 1974
|||||||||| | | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2792 AAACCTTTAGCCTTTTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAACCAAAAAAA 2733
Query 1975 T-A-C--A-------CA-A-GTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAAT 2021
| | | | || | |||||||||||||| ||||||||||||||||||||||||
Sbjct 2732 TGATCTCAATTAATACATAAGTGTTTGGACTTTGTAAAAAGGCTGAGCAATATGAACAAT 2673
Query 2022 ATAAGTGT--AGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTAC 2078
|||||||| | ||| | ||||||| ||||| || |||||||||||||||||||||||||
Sbjct 2672 ATAAGTGTGTA-CAACTGTTACCATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTAC 2614
Query 2079 AAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGA 2138
|||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 2613 AAGTATGTGGAATCTGATTGCGCTTTCTTTCCTTGTAGCTATTGCTTACAACCTAACAGA 2554
Query 2139 TGAATGTTAATTTCTA-AGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTT 2197
|||||| ||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 2553 TGAATGCTAATTTCTATAGTA----TATAGATAAATTTACAAATTCCAAATGCATACCTT 2498
Query 2198 AAATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTT 2257
|||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2497 AAATTCTTGGCTTGTTTTGAGCTTCACAAATTTACGCCAATCAAAAGGAGAAATGTTTTT 2438
Query 2258 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 2317
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2437 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATATTTGTAACTTGCCT 2378
Query 2318 TGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTC 2377
||||||||||||||| ||||| | |||||||||| ||||||||||||||||||| |||||
Sbjct 2377 TGATTTCCAGGACCTTCACAAACGTCCCATCTGCCTAAGCACTGTAACCTTTTGATACTC 2318
Query 2378 TTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACAAAACAG-CTAAGTACTCACACCAA 2436
|||||||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||
Sbjct 2317 TTCATCTAGTTCAAACCTTGCCTGCAATCAAAAACAAAACAGTC-AAGTACTCAC-C-AA 2261
Query 2437 TAT-ATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTG 2495
||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 2260 TATCA-AATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACTG 2202
Query 2496 TCCTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTA 2555
|||| | ||||||||| ||||| |||||||| |||||||||| |||||||||||||||||
Sbjct 2201 TCCTAAGTTCTTCACCAATTTTAGTCCAACGTTCAATTGTGACTGGAACGTGTTCTCTTA 2142
Query 2556 CCAATGCGCCTACATATGATG-CTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATG 2614
||||||| ||||||||||||| | || |||||||||||||||||||||||||||||||||
Sbjct 2141 CCAATGCCCCTACATATGATGTC-AGCTTAACTGAGCCTTTACCAATAGGCTCTCCCATG 2083
Query 2615 TTAGTGAACTCTACT 2629
|||||||||||||||
Sbjct 2082 TTAGTGAACTCTACT 2068
Score = 649 bits (351), Expect = 0.0
Identities = 494/559 (88%), Gaps = 25/559 (4%)
Strand=Plus/Minus
Query 2790 CCACTTGATCTGGATCTGCTAC----T-TGAATCTGCTACTTGAACTTCAGCTGGTGCTA 2844
|||| ||||||||||||| ||| | || ||||| ||||||| ||||||||||| |
Sbjct 1692 CCACCTGATCTGGATCTGGTACTTGTTCTGCATCTGATACTTGATCTTCAGCTGGTTTTG 1633
Query 2845 CATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCAT 2904
|||||| |||||||||||||||||||||||| ||| || |||||||||||||| ||||
Sbjct 1632 CATGTT---CCTCATCATTGACTTGTGGTTCAATTGTTCCAATATACTCGACCTCATCAT 1576
Query 2905 TGGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTC 2961
|||||| |||||| || || |||||||||||||| | | ||||||||||||||||||||
Sbjct 1575 TGGCATTCTTTGCATTGACC-TTTTTTTGTTACTTTTACCTCGCTTTTTCTTCTGTTGTC 1517
Query 2962 CCATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAAGTATA-T--ACTGAAA 3017
|||| ||||||||||||||||||||||||| || |||| |||||||| | | | || ||
Sbjct 1516 CCATCTTAAATCACCTGAGAAAAATGAAAG-AGTAAAGGGTTAAGTACACTGGA-TGCAA 1459
Query 3018 ATAAGACATCAAACACACTAT-GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAA 3076
||||||||| |||||||||| ||||| ||||||||| |||||||| | ||||||| |||
Sbjct 1458 ATAAGACATTGAACACACTATGGGAAA-CAGACATCAAACATAGAGAATGCAACAAGGAA 1400
Query 3077 TGAAAATG-A--TaaaaaaaaaCTACATTTCACAAACATATATCCCTTCACAATCAGAT- 3132
|||||||| | |||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1399 TGAAAATGAAGCAAAAAAAAAACTACATTTCACAAACATATATTCCTTCACAATCAG-TC 1341
Query 3133 CTCTCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCA 3192
||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct 1340 CTCTCATTCTCAGCTTCATCCAAGTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCA 1281
Query 3193 ATGTCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAAT 3252
||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1280 ATGGCTGCAACTGAATCTAAAAACTCTTTCTTACTGAATCTTCTTGAAGAACCTCTCAAT 1221
Query 3253 GCAACATACCAAGGTGATGAGTCATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAG 3312
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 1220 GCAACATACCAAGGTGATGAGTCATCTTCTCTTAGGTAAAAAACTTGTTTTGCTTGAGAG 1161
Query 3313 GCTAGTATATACGGATCCC 3331
||||||| ||||| ||||
Sbjct 1160 ACTAGTATGTACGGTTCCC 1142
Score = 141 bits (76), Expect = 4e-32
Identities = 102/114 (89%), Gaps = 3/114 (3%)
Strand=Plus/Minus
Query 2647 ATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTC-TCTTACGCTTTGGATCAG 2705
||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct 1895 ATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCGT-TTACGCTTTGGCTCAA 1837
Query 2706 CACAATCATAATCCTCAGATAATACAAGCTCTCCTTCAGCCTCTTCCAC-TTGA 2758
||||||||| | |||||||||| ||||||||||| | || ||||||| | ||||
Sbjct 1836 CACAATCATCACCCTCAGATAAAACAAGCTCTCCGTGAGGCTCTTCCTCATTGA 1783
> AT5G32521.1 | Symbols: | transposable element gene | chr5:12170271-12176294
REVERSE LENGTH=6024
Length=6024
Score = 2313 bits (1252), Expect = 0.0
Identities = 1638/1814 (90%), Gaps = 68/1814 (4%)
Strand=Plus/Minus
Query 996 ATCATTATTCTATATATGAGTATGAGAATGAATAATAAACTTTACCTGGGCTTCAATGTC 1055
||||||| |||||||||||| |||||| ||||||||||||||||||||| || |||||||
Sbjct 5940 ATCATTACTCTATATATGAGAATGAGACTGAATAATAAACTTTACCTGGCCTGCAATGTC 5881
Query 1056 TTCTTGTTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCAATCATATG 1115
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 5880 TTCTTGTTGGAGATCCTCTTCTACGCTAACACACATAGCAGCAGGCCATGCAATCATATG 5821
Query 1116 TCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAATGCTTCTGG 1175
||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 5820 TCCAACAGCTTTCTCAATGGTAAACATATTAGCCGCAGGTCTCCAAAGTAATGCTTCTGG 5761
Query 1176 TTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAGTCATTAAC 1235
||||| ||||||||||||||||||||||||||| ||| ||||||| |||||| ||| ||
Sbjct 5760 TTCAAAAGCAGTGTCAATCAAGACTTTAACATCGGTATGGCCTAAACGACAGTTATTCAC 5701
Query 1236 TAATTCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATTAGAACCAGC 1295
||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 5700 TAATTCACCCGAATCAGAAGAAATAATACATCCCTCAGCAACTTTTGCATCAGAACCAGC 5641
Query 1296 CCAATCAAGTAAGACACATTTTGGTTGTGATT-TTTTGTTCACACTCTGTAAAAACAATA 1354
|||||||||||||| |||||||||||||| || |||||||||| |||| ||||| || |
Sbjct 5640 CCAATCAAGTAAGAAACATTTTGGTTGTG-TTCTTTTGTTCACCCTCTTTAAAAGTAAAA 5582
Query 1355 GGTAGACAAAATATCAGGTGATTGTATCTGTTAGAATAAATCAAAGCATCTGATATGAGT 1414
| |||||||| ||| | || | |||||||||||||| |||||||||||| ||||||||||
Sbjct 5581 GATAGACAAAGTATTAAGTTAGTGTATCTGTTAGAACAAATCAAAGCATATGATATGAGT 5522
Query 1415 GACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTCTGTTAC---aaaa 1471
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 5521 GACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGCTGATTGTCTCTGTTACAAAAAAA 5462
Query 1472 -aaaaaG-AA--AAGA----A-GT-C------A-----AA-T-GTTATATATAAATAGTT 1508
|||||| || || | | || | | || | |||||||||||||| |
Sbjct 5461 GAAAAAGAAAGTAAAATCTTATGTACTAATTGAGCCGTAATTCTTTATATATAAATAGAT 5402
Query 1509 AAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCATTGACCTTCTT 1568
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 5401 AAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACTTCTTGTAGCTCATTGACCTTCTT 5342
Query 1569 CTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCACTTGGAAACA 1628
|| ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 5341 TTGTAGACGAAGCTGATTCTCTTGCATTTCAGCGATACACTTGTGCTT-ACTTGGAAACA 5283
Query 1629 AGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCAGGATTGTCAGG 1688
|| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 5282 AGATAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCAGTCTACCAGGACTGTCAGG 5223
Query 1689 CCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGATGGATTATCACT 1748
||||||||||||||||| |||||||||||||||| | ||| | |||||||||||||||
Sbjct 5222 CCCTAACAGTTGGCTTAATGAATCTTGTGCTTCA--T-TTG--T-TGATGGATTATCACT 5169
Query 1749 GTTAACAATCTCCTCTGCCTTTTTCTGAAACTCATAAGATACATATTAAAATATCAAGTG 1808
||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 5168 ATTAACAATCTCTTCTGCCTTTTTCTGAAATTCATAAGATACATTTTAAAATATCAAGTG 5109
Query 1809 TGATTC-AAATGCCAAAATGCAAATC-ATTAGAAGCAAAATAACTCACAATCTTTTCAGC 1866
|||||| ||||| ||||||||||||| | | || |||||||||||||||||||||||||
Sbjct 5108 TGATTCAAAATGACAAAATGCAAATCAAACA-AAACAAAATAACTCACAATCTTTTCAGC 5050
Query 1867 AGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAACCCAAACCTTTAG 1926
| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 5049 AACATTCGTATTCAGTGGTGTACCATCCTTCTTAGTACGTGACTTAACCCAAACCTTTAG 4990
Query 1927 GCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAAC---AAAAAAT-A---C-- 1977
| ||||||||||||||||||||||||||||||||||||||| ||||||| | |
Sbjct 4989 CCTTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAACAAAAAAAAATGATCTCAT 4930
Query 1978 -----AC--AAGTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAATATAA--GTG 2028
|| ||||||||||||||||| ||||||||||| |||||||||||||||| |||
Sbjct 4929 TTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGTAATATGAACAATATAAGTGTG 4870
Query 2029 TAGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAGTGTGTG 2087
|| ||| | ||||||| ||||| || ||| ||||||||||||||||||||||||| ||||
Sbjct 4869 TA-CAACTGTTACCATGTCTTCGGCAAGTTTAACCATTCCCCTGCGACTACAAGTATGTG 4811
Query 2088 GAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAATGTTA 2147
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||
Sbjct 4810 GAATCTGATTGCGCCTTCTTTCCTTGTAGCTGTCGCTTATAACCTAACAGATGAACGTTA 4751
Query 2148 ATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTTG 2207
|||||| | | | |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4750 ATTTCT-A--ATATATATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTGG 4694
Query 2208 CTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATG 2267
|||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||
Sbjct 4693 CTAGTTTTGAGCTTCATAAATTTACGCCAATCAAAAGGAGAAATGTTTTTAGGTCGCATG 4634
Query 2268 TTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAG 2327
||||||||||| |||||||| |||||||||||||| ||||||||||||| ||||||||||
Sbjct 4633 TTCATCCTCTCGTGGTTAGTTTTAGCTTCTCTAATCTTTGTAACTTGCCATGATTTCCAG 4574
Query 2328 GACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGT 2387
||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4573 GACCTCCACAAACGTCCCATCTGCCTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGT 4514
Query 2388 TCAAACCTTGCCTGCACTCAAAAACAAAACAG-CTAAGTACTCACACCAATAT-ATAATA 2445
|||||||||||||||| ||||||||||||||| | |||||||||| | ||||| | ||||
Sbjct 4513 TCAAACCTTGCCTGCAATCAAAAACAAAACAGTC-AAGTACTCAC-C-AATATCA-AATA 4458
Query 2446 AACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTC 2505
||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||
Sbjct 4457 AACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACTGTCCTGAGTTC 4398
Query 2506 TTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCC 2565
|||||| ||||| |||||||| |||||||||| | |||||||||||||||||||||| ||
Sbjct 4397 TTCACCAATTTTAGTCCAACGTTCAATTGTGACTAGAACGTGTTCTCTTACCAATGCCCC 4338
Query 2566 TACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTC 2625
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4337 TACATATGATGCCAGCTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTC 4278
Query 2626 TACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATG 2685
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4277 TACTCTTACTCTGGCATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTTGTCCTCGATG 4218
Query 2686 TCTCTTACGCTTTGGATCAGCACAATCATAATCCTCAGATAATACAAGCTCTCCTTCAGC 2745
|| |||||||||||| ||| ||||||||| | |||||||||| ||||||||||| | ||
Sbjct 4217 TCGCTTACGCTTTGGCTCAACACAATCATCACCCTCAGATAAAACAAGCTCTCCGTGAGG 4158
Query 2746 CTCTTCCAC-TTGA 2758
||||||| | ||||
Sbjct 4157 CTCTTCCTCATTGA 4144
> AT2G11590.1 | Symbols: | transposable element gene | chr2:4635950-4641226
REVERSE LENGTH=5277
Length=5277
Score = 1648 bits (892), Expect = 0.0
Identities = 1103/1199 (92%), Gaps = 38/1199 (3%)
Strand=Plus/Minus
Query 1582 TGATTCTCTTGCATTTCAGCCATACACTTGTGCTTCACTTGGAAACAAGCTAACTTGGTC 1641
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 5275 TGATTCTCTTGCATTTCAGCCATACGCTTGTGCTTCACTTGGAAACAAGCTAACTTAATC 5216
Query 1642 TTATTCATATTGCGACCCATTGCTCTCATTCTACCAGGATTGTCAGGCCCTAACAGTTGG 1701
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 5215 TTATTCATATTGCGACCCATTGCTCTCAGTCTACCAGGATTGTCAGGCCCTAACAATTGG 5156
Query 1702 CTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGATGGATTATCACTGTTAACAATCTCC 1761
|||||||||||| |||||||| | ||| | ||||||||||||||| |||||||||||
Sbjct 5155 CTTAGTGAATCTGGTGCTTCA--T-TTG--T-TGATGGATTATCACTATTAACAATCTCT 5102
Query 1762 TCTGCCTTTTTCTGAAACTCATAAGATACATATTAAAATATCAAGTGTGATTC-AAATGC 1820
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 5101 TCTGCCTTTTTCTGAAACTCATAAGATACATTTTAAAATATCAAGTGTGATTCAAAATGC 5042
Query 1821 CAAAATGCAAATCATTAGAAGCAA-AATAACTCACAATCTTTTCAGCAGCATTCGTATTC 1879
|||||||||||||| | | | || |||||||||||||||||||||||||||||||||||
Sbjct 5041 CAAAATGCAAATCA--A-ACGAAACAATAACTCACAATCTTTTCAGCAGCATTCGTATTC 4985
Query 1880 ACTGGTGTACCATCTTTCTTAGTACGTGACTTAACCCAAACCTTTAGGCGTGTCACTTCA 1939
|||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 4984 ACTGGTGTACCATCCTTCTTAGTACGTGACTTAACCCAAACCTTTAGCCTTGTCACTTCA 4925
Query 1940 GATGGGTCTGCACTAGCAGTTTTCTAAA-CAA-AAAAT-A-C---------AC--AAGTG 1984
|||||||||||||||||||||||||||| ||| ||||| | | || |||||
Sbjct 4924 GATGGGTCTGCACTAGCAGTTTTCTAAACCAAGAAAATGATCTTAGTTAATACATAAGTG 4865
Query 1985 TTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAATATAA--GTGTAGCAA-TATTACC 2041
|||||||||||| |||||||||||||||||||||||||||| ||||| ||| | |||||
Sbjct 4864 TTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAATATAAGTGTGTA-CAACTGTTACC 4806
Query 2042 ATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAGTGTGTGGAATCTGATTGCGC 2101
|| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 4805 ATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTACAAGTATGTGGAATCTGATTGCGC 4746
Query 2102 CTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAATGTTAATTTCTAAGGAAAG 2161
||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 4745 CTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAATGTTAATTTCTATTGTA-- 4688
Query 2162 ATATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTT 2221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4687 -TATAGATAAATTTACAAATTCCAAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTT 4629
Query 2222 CACAAATTTACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATGTTCATCCTCTCTTG 2281
|||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 4628 AACAAATTTACGCCAATCAAAAGGAGAAATGTTTTTGGGTCGCATGTTCATCCTCTCTTG 4569
Query 2282 GTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCA 2341
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 4568 GTTAGTAATAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTTCACAAACA 4509
Query 2342 TCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTG 2401
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 4508 TCCCATCTGCCTAAGCACTGTAACCTTTTGGTACTTTTCATCTAGTTCAAACCTTGCCTG 4449
Query 2402 CACTCAAAAACAAAACAG-CTAAGTACTCACACCAATATATAATAAACTTGTAAATTTTA 2460
|| ||||||||||||||| | |||||||||| | ||||| ||||||||||||||||||||
Sbjct 4448 CAATCAAAAACAAAACAGTC-AAGTACTCAC-C-AATATCTAATAAACTTGTAAATTTTA 4392
Query 2461 CACAAATCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATTTTTGT 2520
|||||| |||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||
Sbjct 4391 CACAAAGCTTACCTGAACAGATTTCCAGAGAACTGTCCTGAGTTCTTCACCAATTTTAGT 4332
Query 2521 CCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGATGCTAG 2580
|||||| |||||||||| |||||||||||||||||||||||| |||||||||||||| ||
Sbjct 4331 CCAACGTTCAATTGTGACTGGAACGTGTTCTCTTACCAATGCACCTACATATGATGCCAG 4272
Query 2581 TTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTCTACTCTTACTCTGGT 2640
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4271 CTTAACTGAGCCTTTACGAATAGGCTCTCCCATGTTAGTGAACTCTACTTTTACTCTGGT 4212
Query 2641 ATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACGCTTTGG 2700
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 4211 ATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCGCTTACGCTTTGG 4152
Query 2701 ATCAGCACAATCATAATCCTCAGATAATACAAGCTCTCCTTCAGCCTCTTCCAC-TTGA 2758
||| ||||||||| | |||||||||| |||||||||| | || ||||||| | ||||
Sbjct 4151 CTCAACACAATCATCACCCTCAGATAAAACAAGCTCTCGGTGAGGCTCTTCCTCATTGA 4093
Score = 641 bits (347), Expect = 0.0
Identities = 491/557 (88%), Gaps = 24/557 (4%)
Strand=Plus/Minus
Query 2791 CACTTGATCTGGATCTGCTACTTGAATCTG---CT---ACTTGAACTTCAGCTGGTGCTA 2844
||| |||||||||||| ||||||| ||||| || |||||||||||||||||| ||
Sbjct 4001 CACCTGATCTGGATCTTCTACTTG-ATCTGCATCTGAAACTTGAACTTCAGCTGGTTCTG 3943
Query 2845 CATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCAT 2904
||| || |||||||||||||||||||||||| ||| || |||||||||||||| ||||
Sbjct 3942 CATATT---CCTCATCATTGACTTGTGGTTCAATTGTTCCAATATACTCGACCTCATCAT 3886
Query 2905 TGGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTC 2961
|||||| |||||| || ||||||||||||||||| | | ||||||||||||||||||||
Sbjct 3885 TGGCATTCTTTGCATTGACCTTTTTTTTGTTACTTTTACCTCGCTTTTTCTTCTGTTGTC 3826
Query 2962 CCATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAAGTATA-T--ACTGAAA 3017
|||| |||||||||| |||||||||||||| || |||| |||||||| | | | || ||
Sbjct 3825 CCATCTTAAATCACCGGAGAAAAATGAAAG-AGTAAAGGGTTAAGTACACTGGA-TGCAA 3768
Query 3018 ATAAGACATCAAACACACTAT-GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAA 3076
||||||||| |||||||||| ||||| ||||||||| |||||||| | ||||||| |||
Sbjct 3767 ATAAGACATTGAACACACTATGGGAAA-CAGACATCAAACATAGAGAATGCAACAAGGAA 3709
Query 3077 TGAAAATG-ATaaaaaaaaaCTACATTTCACAAACATATATCCCTTCACAATCAGAT-CT 3134
|||||||| | |||||||||||||||||||||||||| || |||| ||||| || | ||
Sbjct 3708 TGAAAATGAAGCAAAAAAAACTACATTTCACAAACATAAATTCCTTTACAATTAG-TCCT 3650
Query 3135 CTCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCAAT 3194
||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||
Sbjct 3649 CTCATTCTCAGCTTCATCCAAGTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCAAT 3590
Query 3195 GTCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAATGC 3254
| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 3589 GGCTGCAACTGAATCTACAAACTCTTTCTGACTAAATCTTCTTGAAGAACCTCTCAATGC 3530
Query 3255 AACATACCAAGGTGATGAGTCATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAGGC 3314
||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct 3529 AACATACCAAGGTGATGAGTCATCTTCTCTTAGGTAAAAAACCTGTTTTGCTTGAGAGGC 3470
Query 3315 TAGTATATACGGATCCC 3331
|||||| || |||||||
Sbjct 3469 TAGTATGTATGGATCCC 3453
> AT2G11550.1 | Symbols: | transposable element gene | chr2:4626902-4631904
REVERSE LENGTH=5003
Length=5003
Score = 1208 bits (654), Expect = 0.0
Identities = 838/923 (91%), Gaps = 27/923 (3%)
Strand=Plus/Minus
Query 1855 AATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGACTTAAC 1914
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 5003 AATCTTTTCAGCAACATTCGTATTCACTGGTGTACCATCCTTCTTAGTACGTGACTTAAC 4944
Query 1915 CCAAACCTTTAGGCGTGTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAAA-CAAAAA 1973
|||||||||||| | ||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 4943 CCAAACCTTTAGCCTTGTCACTTCAGATGGGTCTCCATTAGCAGTTTTCTAAACCAAAAA 4884
Query 1974 AT-A-C---------AC--AAGTGTTTGGACTTTGGGAAAAGGCTGAGCAATATGAACAA 2020
|| | | || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 4883 ATGATCTTAGTTAATACATAAGTGTTTGGACTTTGGAAAAAGGCTGAGCAATATGAACAA 4824
Query 2021 TATAA--GTGTAGCAA-TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTA 2077
||||| ||||| ||| ||||||||| ||||| || ||||||||||||||||||||||||
Sbjct 4823 TATAAGTGTGTA-CAACTATTACCATGTCTTCGGCAAGTCTAACCATTCCCCTGCGACTA 4765
Query 2078 CAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 2137
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4764 CAAGTCTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 4705
Query 2138 ATGAATGTTAATTTCTAAGGAAAGATATAGATAAATTTACAAATTCCAAATGCATACCTT 2197
||||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 4704 ATGAATGTTAATTTCTATTGTA---TATAGATAAATTTACAAATTCCAAATGCATACCTT 4648
Query 2198 AAATTCTTTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAATATTTTT 2257
|||||||| |||||||||||||||||||||||||||||||||||| | |||||| |||||
Sbjct 4647 AAATTCTTGGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAAAGAAGAAATGTTTTT 4588
Query 2258 AGGTCGCATGTTCATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 2317
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4587 GGGTCGCATGTT-ATCCTCTCTTGGTTAGTCTTAGCTTCTCTAATGTTTGTAACTTGCCT 4529
Query 2318 TGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGTACTC 2377
||||||| ||||||||||||| ||| |||||| | |||||||||||||||||||||||||
Sbjct 4528 TGATTTCAAGGACCTCCACAAACATTCCATCTACCTAAGCACTGTAACCTTTTGGTACTC 4469
Query 2378 TTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACAAAACAG-CTAAGTACTCACACCAA 2436
|||||| ||||||||| ||||||| | ||||||||||||||| | |||||||||| | ||
Sbjct 4468 TTCATCAAGTTCAAACTTTGCCTGTAGTCAAAAACAAAACAGTC-AAGTACTCAC-C-AA 4412
Query 2437 TATATAATAAACTTGTAAATTTTACACAAATCTTACCTGGACAGATTTCCAGAGAACTGT 2496
||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 4411 TATCTAATAAACTTGTAAATTTTACACAAAGCTTACCTGAACAGATTTCCAGAGAACTGT 4352
Query 2497 CCTGACTTCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTAC 2556
||||| ||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||
Sbjct 4351 CCTGAGTTCTTCACCAATTTTACTCCAACGTTCAATTGTGACTGGAACGTGTTCTCTTAC 4292
Query 2557 CAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTT 2616
|||||| |||||||||||||| || |||||||||||||||||||||| ||||||||||||
Sbjct 4291 CAATGCCCCTACATATGATGCCAGCTTAACTGAGCCTTTACCAATAGTCTCTCCCATGTT 4232
Query 2617 AGTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGG 2676
|| |||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct 4231 AGCGAACTCTACTCTTACTCTTGCATTTGGATCCTTGGCAATATCCTTCAGCCTAATTGG 4172
Query 2677 TCCTCGATGTCTCTTACGCTTTGGATCAGCACAATCATAATCCTCAGATAATACAAGCTC 2736
||||||||||| |||||||||||| ||| || || ||| | ||| |||||| ||||||||
Sbjct 4171 TCCTCGATGTCGCTTACGCTTTGGCTCAACATAAACATCACCCTAAGATAAAACAAGCTC 4112
Query 2737 TCCTTCAGCCTCTTCCAC-TTGA 2758
||| | || ||||||| | ||||
Sbjct 4111 TCCGTGAGGCTCTTCCTCATTGA 4089
Score = 658 bits (356), Expect = 0.0
Identities = 493/556 (89%), Gaps = 22/556 (4%)
Strand=Plus/Minus
Query 2791 CACTTGATCTGGATCTGCTACTTGA-----ATCTGCTACTTGAACTTCAGCTGGTGCTAC 2845
||| |||||| |||||||||||||| ||||| ||||||||||||||||||| ||||
Sbjct 3997 CACCTGATCTAGATCTGCTACTTGATCTGCATCTGATACTTGAACTTCAGCTGGTTCTAC 3938
Query 2846 ATGTTCGACCTCATCATTGACTTGTGGTTCAACTGTACCCATATACTCGACCTCCTCATT 2905
||||| |||||||||||||||||||||||| ||| || |||||||||||||| |||||
Sbjct 3937 ATGTT---CCTCATCATTGACTTGTGGTTCAATTGTTCCAATATACTCGACCTCATCATT 3881
Query 2906 GGCATGCTTTGC-TT--CCttttttttGTTACTTCTGCATCGCTTTTTCTTCTGTTGTCC 2962
||||| |||||| || ||||||||||||||||| | | |||||||||||| ||||||||
Sbjct 3880 GGCATTCTTTGCATTGACCTTTTTTTTGTTACTTTTACCTCGCTTTTTCTTTTGTTGTCC 3821
Query 2963 CATTTTAAATCACCTGAGAAAAATGAAAGAAG-AAAGAGTTAAGT--ATAT-ACTGAAAA 3018
||| ||||||||| ||||||||||||||| || |||| ||||||| | || | || |||
Sbjct 3820 CATCTTAAATCACATGAGAAAAATGAAAG-AGTAAAGGGTTAAGTACACATGA-TGCAAA 3763
Query 3019 TAAGACATCAAACACACTAT-GGAAATCAGACATCAGACATAGAGCAGGCAACAAAGAAT 3077
|||||||| |||||||||| ||||| ||||||||| |||||||| | ||||||| || |
Sbjct 3762 TAAGACATTGAACACACTATGGGAAA-CAGACATCAAACATAGAGAATGCAACAAGGAGT 3704
Query 3078 GAAAATG-ATaaaaaaaaaCTACATTTCACAAACATATATCCCTTCACAATCAGAT-CTC 3135
||||||| | |||||||||||||||||||||||||| || ||||||||||||| | |||
Sbjct 3703 GAAAATGAAGCAAAAAAAACTACATTTCACAAACATAAATTCCTTCACAATCAG-TCCTC 3645
Query 3136 TCATTCTCAGCTTCATCCAAGTCAACGTCGATGTCAATATTTGGTGGCAATGTGCCAATG 3195
|||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||
Sbjct 3644 TCATTCTCAGCTTCATCCAAGTCAGCGTCTATGTCAACATTTGGTGGCAATGTGCCAATG 3585
Query 3196 TCTGCAACTGAATCTAGAAACTCTTTCTGACTGAATCTTCTTGAAGGACCTCTCAATGCA 3255
||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 3584 GCTGCAACTGAATCTACAAACTCTTTCTGACTAAATCTTCTTGAAGAACCTCTCAATGCA 3525
Query 3256 ACATACCAAGGTGATGAGTCATCTTCCCTTAGGTAAAACACTTGTTTTGCTTGAGAGGCT 3315
|||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||
Sbjct 3524 ACATACCAAGGTGATGAGTCATCTTCTCTTAGGTAAAAAACCTGTTTTGCTTGAGAGGCT 3465
Query 3316 AGTATATACGGATCCC 3331
||||| || |||||||
Sbjct 3464 AGTATGTATGGATCCC 3449
> AT5G32487.1 | Symbols: | transposable element gene | chr5:12119770-12122316
REVERSE LENGTH=2547
Length=2547
Score = 1074 bits (581), Expect = 0.0
Identities = 898/1040 (86%), Gaps = 66/1040 (6%)
Strand=Plus/Minus
Query 14 AACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATACTCGATTTCA 73
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1638 AACTTACCCATTGGCCATGCAATAGATGAACCAAGTGAATCTCTCATATACTCGATTTCA 1579
Query 74 TCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTAGCT 133
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578 TCTGATGCCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTAGCT 1519
Query 134 GCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGCACACGT 193
|||||| | |||||||||||||||||||||||| ||||||||| || |||||||||||||
Sbjct 1518 GCATTATCTCCCAAGCGAACATGGTGTACCTTTTGGTCTGGGTAGACTGAATGCACACGT 1459
Query 194 CCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTGATTGGCC 253
||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct 1458 CCTTCAGCAACCACCTGCTTCCTTCCACTGATATCCATTAACTTACACTTCTGTTTGGCC 1399
Query 254 TTGATAACTTCAGCTACACTTTTACGCTGCAATGTTACAATATAAACCAGGTTTAATGCA 313
||| ||||||||||||||| |||||||||| ||||||||||||||||||| ||||||| |
Sbjct 1398 TTGCTAACTTCAGCTACACCTTTACGCTGCCATGTTACAATATAAACCAGTTTTAATGTA 1339
Query 314 TGTAGAAAAATAACCAGATTC-A-A--TAGGTAAAAACAATAAACAAAATACCGGAGATC 369
||||||||||||||||||||| | | ||||||| ||||| |||||||||||||||||||
Sbjct 1338 TGTAGAAAAATAACCAGATTCAATAGCTAGGTAATAACAACAAACAAAATACCGGAGATC 1279
Query 370 TTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACTTTGAACCTG 429
|||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||
Sbjct 1278 TTCTCAGAGGGAGTTGTGAATCCAGCAGCTGACTTTTCTTGATAGGAGAATTTGAACCTT 1219
Query 430 TAGCTGTGGACTTCTCAGCTA-GAGCTTTTGAAACTGTTGCAACGGATTTTGTACCTTTT 488
||||||||||||||||||||| | || ||||||| | ||||||| |||||||||||||||
Sbjct 1218 TAGCTGTGGACTTCTCAGCTATG-GCCTTTGAAATTATTGCAACAGATTTTGTACCTTTT 1160
Query 489 GTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctgcagtttgtgaacctgatcct 548
| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1159 GCTGTAGATATCTCAGGGGATGGCTTATAACCTGCTGCTGCAGTTTGTGAACCTGATGCT 1100
Query 549 gctgc--tttc----cctgatgctgctgct-----g-atgctgctgctttccctgctgat 596
||||| ||| ||||||||||||||| | | ||| |||||||| | | |||
Sbjct 1099 GCTGCAGTTTGTGAACCTGATGCTGCTGCTTTCCCGGACGCTACTGCTTTCTC-G--GAT 1043
Query 597 gctgctgattttcctactgatgct-gctg-ctT-CC-A---ATG--G-TGATTTTCCT-C 645
||||| | || ||||||||| || |||| ||| || | ||| | ||| || ||| |
Sbjct 1042 CCTGCTAACTTGCCTACTGAT-CTTGCTGACTTGCCTACTGATGCTGCTGACTTGCCTAC 984
Query 646 T--TGCAGCAGAAGTCTGAAGTGGAGATTT-C-TGACATGTTGCA----TCTGTA-TGG- 695
| ||| || | || || ||| ||||| | | | ||| ||| |||| | |||
Sbjct 983 TGATGCTGCTGCTTTC--AA-TGGTGATTTTCCT--CTTGTAGCAGAAGTCTGAAGTGGA 929
Query 696 --TTT-T--CAAAGAT-CA-CTTT-GTG--GACAGGCCATGCTACATAAGACA-TTAAAC 744
||| | || | | || || | | |||||||||||| ||| |||||| |||| |
Sbjct 928 GATTTCTGGCAT-GTTGCATCTGCAGGGTTGACAGGCCATGCAACAAAAGACAATTAA-C 871
Query 745 AGTCCTCAA-AGTATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGA 803
||||||||| | || ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 870 AGTCCTCAAGA-TAAGTCACATCCATCGTTGGCCTCCATATAAACGTCTCTGGTTGAAGA 812
Query 804 ACTGCATCGACAAATATCTTTACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGCG 863
|||||||||||||||||||| | |||||| || ||||||||||||||||||||||||||
Sbjct 811 ACTGCATCGACAAATATCTTCATTGCTGCAGGTCCGAGAGGAAGCCCATTGACTAATGCA 752
Query 864 TTGTG-TTCTTGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTGAAGACAAATC 922
|| || ||||||||||||||||| |||||||||||||||||| |||| ||||||||||||
Sbjct 751 TT-TGGTTCTTGTGTCTGCCAACATCCTTCTGCAACAACAACATCATTTGAAGACAAATC 693
Query 923 CAGTAGTTTGCATTTGTTCACTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATT 982
|| || | | ||||||| | ||||||||| |||||||||| |||||||| |||||||||
Sbjct 692 CAAAAGCTGGTATTTGTT-ATTTGGTCCCTGTCAAAAACATAGAAACCCAGAAATACATT 634
Query 983 GTGTTAATAGAAGATCATTA 1002
|||||||||||||||||||
Sbjct 633 ATGTTAATAGAAGATCATTA 614
> AT2G14970.1 | Symbols: | transposable element gene | chr2:6457721-6461341
REVERSE LENGTH=3621
Length=3621
Score = 1040 bits (563), Expect = 0.0
Identities = 1451/1857 (78%), Gaps = 152/1857 (8%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
||| ||| | |||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct 3215 TCAGTAGGTCACCAACTTATCCTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 3156
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120
||||||||||||||||||||||||||| ||||||| |||||||| ||||||| ||| ||
Sbjct 3155 ATACTCGATTTCATCTGATGGCCTCCAGACTGCTGTATCATCTACATTCACTACATCTAC 3096
Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180
|||||||||||||||||| | ||||| |||||||||||||||||| | |||||||| ||
Sbjct 3095 CCAAACTCTAGCTGCATTCTCTCCCAAACGAACATGGTGTACCTTTTGATCTGGGTCTAT 3036
Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240
||||||||| |||||| || |||||||| ||||||||||||| |||||||||||||| ||
Sbjct 3035 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCA 2976
Query 241 CTTCTGATTGGCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATA 297
||||||||| ||||| | ||| ||||| | |||| ||||| || ||||||| ||||
Sbjct 2975 CTTCTGATTAGCCTTCA-AACCTTCAGATGTT-TTTTGGCGCTGACA-TGTTACATTATA 2919
Query 298 AACCAGGTTTAAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAA 356
||||||| |||| ||||||||||| | | || | ||||| || ||| ||| | ||||
Sbjct 2918 AACCAGGATTAAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-ATACAA 2862
Query 357 AAT-ACCGGAGATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACA 413
| | ||||||||||| | | |||| | ||| |||| | | |||||| ||||||| |||
Sbjct 2861 ACTTACCGGAGATCTCCGT-AGAGCG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACA 2807
Query 414 AAAGACTTTG-AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCA 470
|||||||| ||| |||| | | || ||||||| | |||| ||||| || |||| |
Sbjct 2806 TGAGACTTTGGAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCT 2750
Query 471 ACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgc 529
| |||| || ||| || | || ||||| || || || | |||| ||||| || | |
Sbjct 2749 GCAGATTCTGAACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCC 2691
Query 530 agtttgt-gaacctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgc 583
||||| | || || || ||||| || || || | | || ||| |||| | |
Sbjct 2690 T-TTTGTTGCTCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTGTTGCTCCAT-- 2638
Query 584 tttccctg-ct-gatgctgctgattttcctactgatgctgctgctTCCAATGG-TGATTT 640
||| || || | ||||||||| |||||| ||| |||| || || ||| | | ||
Sbjct 2637 TTTGT-TGACTTGCTGCTGCTGACTTTCCTTTTGAGGCTGATG-TTGT--TGGATAAGTT 2582
Query 641 TCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTTT 698
| | | || | | ||||||| |||| ||||||| | || || |||||| || |||
Sbjct 2581 GA-T-T-G-AG-A-AC-TCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGTGGTG-TTT 2531
Query 699 TCAAAG-ATCACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAGT 756
||| || | ||||||||| |||||||||||||| ||||| | |||||||||||||| ||
Sbjct 2530 TCATAGGAA-ACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGGT 2473
Query 757 ATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACAA 816
|||||||||||||||||||||||||||| || ||||| |||||||| | | |||| ||||
Sbjct 2472 ATGTCACATCCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACAA 2413
Query 817 ATATCTTT-ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCTT 873
||| |||| ||||| || || |||| |||||||||||| |||||||| | ||| || |||
Sbjct 2412 ATA-CTTTCACTGCAGCAGGTCCGA-AGGAAGCCCATTAACTAATGCAGATTG-GT-CTT 2357
Query 874 GTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTTG 932
|||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||
Sbjct 2356 CTGTCTGCCAACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTTG 2298
Query 933 CATTTGTT-C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACAT 981
|| ||||| | | |||||||||| ||||| ||||| ||||| || | | |
Sbjct 2297 CACTTGTTTCCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C-T 2243
Query 982 TGTGTTAATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTTA 1039
| || | | || || | | | |||| | ||||||| |||||| |||| | ||||
Sbjct 2242 TA-GT-A-T-GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTTA 2194
Query 1040 CCTGGGCTTCAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCA 1098
|||| || |||||||||| | ||| || | ||| |||||| |||||||||||||| ||
Sbjct 2193 CCTGTGC---AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAACA 2138
Query 1099 GGCCATGCAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTC 1158
||||| || ||||| || |||||||||||||| || | ||||||| || ||||||
Sbjct 2137 GGCCAAGCTATCATCTGACCAACAGCTTTCTCCATAATTTCCATGTTAATTGCGGGTCTC 2078
Query 1159 CAAAGGAATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCT 1218
|||||| ||||||||||| |||| |||||||||||||| ||||||||||| ||||| |||
Sbjct 2077 CAAAGGTATGCTTCTGGTACAATCGCAGTGTCAATCAATACTTTAACATCTGTAGGACCT 2018
Query 1219 AAGGGACAGTC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAA 1276
||| ||| || ||| |||| | ||| ||||||||||||| |||||||| |||||| |||
Sbjct 2017 AAGCGACT-TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAACAA 1960
Query 1277 CTTTTACATTAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTC 1335
| || ||| || |||||||||||| | | |||| ||| || ||||||||| || ||||
Sbjct 1959 CGGTTGCATCAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTTC 1901
Query 1336 ACACTCTGTAAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATAA 1393
|||||||||| || ||| | ||| | | ||||| | ||| || || | || ||
Sbjct 1900 ACACTCTGTATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAA-AA 1849
Query 1394 -ATCAAA-GCATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGG 1451
|||||| | ||| ||| ||||||||||||||||||||||| ||||||| |||||||
Sbjct 1848 GATCAAAAGTATCAAATAAAAGTGACTTACTCTTGCAGCTGAGGTTTCACCAACTTCAGC 1789
Query 1452 TGATTGTCTCTGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TT 1494
||||||||||||| || ||||||||| | |||| || || | || || | ||
Sbjct 1788 TGATTGTCTCTGT-ACCAAAAAAAAAAACAAAGTCAAATATATGTACTAACCGATTGATT 1730
Query 1495 A--TATAT--A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCT 1548
| | ||| | || ||| ||||| || | |||||||| || || |||||||| |||
Sbjct 1729 AGCTTTATGCATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCT 1672
Query 1549 TGTAGCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACAC 1608
|||| |||||||||||||| |||||| || ||| |||| ||||||||||||||||||
Sbjct 1671 TGTAACTCATTGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACAT 1612
Query 1609 TTG-TGCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCT 1667
||| | || |||||||||||||||| |||||||| |||||||| | ||||| || ||
Sbjct 1611 TTGCTTTTT-ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCT 1553
Query 1668 CATTCTACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGT 1727
| ||||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 1552 TAATCTACTAGGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGT 1493
Query 1728 TGCATGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783
||| |||| || | ||||| |||||||||| ||||||||||||| |||| |||
Sbjct 1492 CCCATTTGATTGAGGACCACTGCTAACAATCTCAGCTGCCTTTTTCTGCAAAC-CAT 1437
Score = 604 bits (327), Expect = 1e-171
Identities = 761/959 (79%), Gaps = 75/959 (8%)
Strand=Plus/Minus
Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGA 1908
||||| ||| |||||||| ||||| |||||||||||||| |||| |||||| || |||||
Sbjct 1246 ACTCATAATTTTTTCAGCCGCATTTGTATTCACTGGTGTTCCATATTTCTTGGTCCGTGA 1187
Query 1909 CTTAACCCAAACCTTTAGGCGT-GTCACTTCAGATGGGTCTGCACTAGCAGTTTTCT--- 1964
||||||||||||||||| || | |||||||||| ||||||||||||| || ||||||
Sbjct 1186 CTTAACCCAAACCTTTA-GCCTCGTCACTTCAGTTGGGTCTGCACTACCAATTTTCTGAA 1128
Query 1965 AAACAAAAAATACACAAGTGTT--T-G-GA-CT---T-TGGGAA-AA-GGCTGAGCAATA 2013
||||| || || | ||| | || | | | || | | || || | |||||||
Sbjct 1127 AAACACAACATGC-CAA-TATTAGTAGCAAGCTAAGTGTTTTAAGAATTTCAAAGCAATA 1070
Query 2014 TGAACAATATAA-GT-GTAG-CA-AT---ATTACCATATCTTCTGCTAGTCTAACCATTC 2066
|| || |||| | || || || ||||||||||||||||| |||||||||| ||
Sbjct 1069 --AAAAACATAACCTAACAGACACATAAGATTACCATATCTTCTGCAAGTCTAACCA-TC 1013
Query 2067 CC-CTGCGACTACAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTT 2125
|| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||
Sbjct 1012 CCTCTGCGACTACAAGTGTGAGGAATCTGGTTGCGCCTTCTCTCCTTGTAGCTATCGCTT 953
Query 2126 ACAACCTAAC-A-GA-TG--AA-T-GTTAA-TTTCT--A-AGGAAAGATA--TAGATAAA 2172
| |||||||| | || || || | | ||| ||||| | || ||| ||| ||| | ||
Sbjct 952 ATAACCTAACAATGATTGTTAATTAG-TAACTTTCTACATAGTAAATATACTTAGTTTAA 894
Query 2173 T-TTACAAATTCC-AAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTTCACAAATTT 2230
| || | | || || |||||||||||||| |||||||||| ||||||||||||
Sbjct 893 TCTT-C---TCCCTCAA--CATACCTTAAATTCAGGGCTAGTTTTGCTCTTCACAAATTT 840
Query 2231 ACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATG-TTCATCCTCT-CTTGGTTAGTC 2288
| ||| ||||||||||||| ||||||||||| || | |||||||||| | ||||| |||
Sbjct 839 TCTCCACTCAAATGGAGAAACATTTTTAGGTCTCA-GATTCATCCTCTGC-TGGTTTGTC 782
Query 2289 TTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATC 2348
|| |||||||||| || || |||||||||||||||||||| |||||||| ||||||||
Sbjct 781 TTTGCTTCTCTAAACTTAGTTACTTGCCTTGATTTCCAGGATCTCCACAAACATCCCATT 722
Query 2349 TGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAA 2408
||||||||||||| ||||||||| ||||| ||||||||||||||| |||||| || ||||
Sbjct 721 TGCTTAAGCACTGCAACCTTTTGATACTCCTCATCTAGTTCAAACTTTGCCTTCAATCAA 662
Query 2409 AAACA-AAACA--GCTAAGTAC--TCA-CACCAATATATAAT-AAA-CTT-GTAAATTTT 2459
||| ||| | | | | | | | | | || | ||| | ||| || ||| |
Sbjct 661 TTACAGAAAAAGTGATTATTGCTGTGATAAGGAA-AGATAGTCAAATATTACAAAAAAAT 603
Query 2460 ACACA---AA-TCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATT 2515
| | | || | |||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 602 AAAAAGTGAAGTGTTACCTGGACAGATTTCCAGAGAAGTGTCCTGATTTCTTCACCTATT 543
Query 2516 TTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGAT 2575
|||||||| |||| ||||||||| || |||||||| | |||||||||||| ||||||||
Sbjct 542 TTTGTCCACCGATTAATTGTGATAGGGACGTGTTCACGGACCAATGCGCCTGCATATGAT 483
Query 2576 GCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTCTACTCTTACT 2635
|||| |||||||||||||||||||||||||||||||| | ||| |||| ||||| |||
Sbjct 482 GCTAACTTAACTGAGCCTTTACCAATAGGCTCTCCCATCATGGTGTACTCCACTCTCACT 423
Query 2636 CTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACG- 2694
|||| |||||||||||| |||||||| |||| |||||||||||| || || ||||| |
Sbjct 422 CTGGCATTTGGATCCTTAGCAATATCTTTCATCCTAGTTGGTCCACGTTGCCTCTTG-GT 364
Query 2695 CTTTGGATCAGCA-CAATCATAATCCTC-AGATAATACAAGCTCTCCTTCAGCCTCTTC 2751
||| || | | || || || | ||| || ||||||| ||||||| ||||||| |||||
Sbjct 363 CTTAGGTTGAACAACA-TCTTCATC-TCCAGATAATTCAAGCTCGCCTTCAGGTTCTTC 307
> AT5G28526.1 | Symbols: | transposable element gene | chr5:10515532-10521998
REVERSE LENGTH=6467
Length=6467
Score = 1033 bits (559), Expect = 0.0
Identities = 1443/1847 (78%), Gaps = 152/1847 (8%)
Strand=Plus/Minus
Query 11 ACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATACTCGATT 70
|||||||||||| |||||||| |||| | |||||||||||||||||||||||||||||||
Sbjct 6460 ACCAACTTATCCTTTGGCCATACAATTGATGAACCAAGTGAATCTCTCATATACTCGATT 6401
Query 71 TCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTA 130
||||||||||||||||| ||||||| |||||||| ||||||| ||| ||||||||||||
Sbjct 6400 TCATCTGATGGCCTCCAGACTGCTGAATCATCTACATTCACTACATCTACCCAAACTCTA 6341
Query 131 GCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGCACA 190
|||||||| | ||||| | |||||||||||||||| | |||||||| |||||||||||
Sbjct 6340 GCTGCATTCTCTCCCAAACAAACATGGTGTACCTTTTGATCTGGGTCTATTGAATGCACT 6281
Query 191 CGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTGATTG 250
|||||| || |||||||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct 6280 CGTCCTGCACCAACCACCCGCTTCTTTCCACTCATATCCATTAACTTGCACTTCTGATTA 6221
Query 251 GCCTTGATAAC-TTCAGCTACACTTTTA-CGCTGCA-ATGTTACAATATAAACCAGGTTT 307
||||| | ||| ||||| | |||| |||| || |||||||| ||||||||||| ||
Sbjct 6220 GCCTTCA-AACCTTCAGATGTT-TTTTGGCGCT-CACATGTTACATTATAAACCAGGATT 6164
Query 308 AAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAAT-ACCGGA 365
|| ||||||||||| | | || | ||||| || ||| ||| | ||||| | ||||||
Sbjct 6163 AAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-AGACAAACTTACCGGA 6107
Query 366 GATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACTTTG 423
||||| | | |||||| ||| |||| | | |||||| ||||||| |||| ||||||||
Sbjct 6106 GATCTCCGT-AGAGGG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACAAGAGACTTTG 6052
Query 424 -AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCAACGGATTTTG 480
||| |||| | | || ||||||| | |||| ||||| || |||| | | |||| ||
Sbjct 6051 GAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCTGCAGATTCTG 5995
Query 481 TACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgcagtttgt-ga 538
||| || | || ||||| || || || | |||| ||||| || | | ||||| |
Sbjct 5994 AACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCCT-TTTGTTGC 5937
Query 539 acctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgctttccctg-c 592
|| || || ||||| || || || | | || ||| |||| | | ||| || |
Sbjct 5936 TCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTGTTGCTCCAT--TTTGT-TGAC 5884
Query 593 t-gatgctgctgattttcctactgatgctgctgct-TCCAATGG-TGATTTTCCTCTTGC 649
| | ||||||||| |||||| ||| |||| |||| | ||| | | || | | |
Sbjct 5883 TTGTTGCTGCTGACTTTCCTTTTGAGGCTGATGCTGT----TGGATAAGTTGA-T-T-G- 5832
Query 650 AGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTTTTCAAAG-AT 706
|| | | ||||||| |||| ||||||| | || || |||||| || |||||| || |
Sbjct 5831 AG-A-AC-TCTGAAGAGGAGTTTTCTGAAC-TGCTGAATCTGTGGTG-TTTTCATAGGAA 5777
Query 707 CACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAGTATGTCACAT 765
||||||||| |||||||||||||| ||||| | |||||||||||||| |||||||||||
Sbjct 5776 -ACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGGTATGTCACAT 5719
Query 766 CCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACAAATATCTTT- 824
||||||||||||||||||| || ||||| |||||||| | | |||| ||||||| ||||
Sbjct 5718 CCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACAAATA-CTTTC 5660
Query 825 ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCTTGTGTCTGCC 882
||||| | || ||||||||||||||||| |||||||| | ||| || ||| ||||||||
Sbjct 5659 ACTGCAACAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CTTTTGTCTGCC 5602
Query 883 AACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTTGCATTTGTT- 940
|||||||||||||||||| ||| |||| || |||||||||||||||||||||| || ||
Sbjct 5601 AACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTTGCACTTATTT 5543
Query 941 C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTTAAT 990
| | |||||||||| ||||| ||||| ||||| || | | || || | |
Sbjct 5542 CCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C-TTA-GT-A-T 5491
Query 991 AGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTTACCTGGGCTT 1048
|| || | | | |||| | ||||||| |||||| |||| | |||||||| ||
Sbjct 5490 -GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTTACCTGTGC-- 5441
Query 1049 CAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCA 1107
|||||||||| | ||| || | ||| |||||| |||||||||||||| ||||||| ||
Sbjct 5440 -AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAACAGGCCAAGCT 5383
Query 1108 ATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAAT 1167
||||| || |||||||||||||| || | ||||||| | || |||||||||||| ||
Sbjct 5382 ATCATCTGACCAACAGCTTTCTCCATAATTTCCATGTTAACTGCGGGTCTCCAAAGGTAT 5323
Query 1168 GCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAG 1227
||||||||| |||| |||||||||||||| ||||||||||| ||||| |||||| |||
Sbjct 5322 GCTTCTGGTACAATCGCAGTGTCAATCAATACTTTAACATCTGTAGGACCTAAGCGACT- 5264
Query 1228 TC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACAT 1285
|| ||| |||| | ||| ||||||||||||| |||||||| ||||||||||| || |||
Sbjct 5263 TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCAACGGTTGCAT 5205
Query 1286 TAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTCACACTCTGT 1344
|| |||||||||||| | | |||| ||| || ||||||||| || |||||||||||||
Sbjct 5204 CAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTTCACACTCTGT 5146
Query 1345 AAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATAAATCAAA-GC 1401
| || ||| | ||| | | ||||| | ||| || || | || | |||||| |
Sbjct 5145 ATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAAGAGATCAAAAGT 5093
Query 1402 ATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTC 1461
||| ||| ||||||||||||| ||||||||| ||||||| ||||||| ||||||||||
Sbjct 5092 ATCAAATAAAAGTGACTTACTCTGGCAGCTGAGGTTTCACCAACTTCAGCTGATTGTCTC 5033
Query 1462 TGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TTA--TATAT-- 1500
| | || ||||||||| | |||| || || | || || | ||| | |||
Sbjct 5032 TAT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATTAGCTTTATGT 4975
Query 1501 A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCAT 1558
| || ||| ||||| || | |||||||| || || |||||||| ||||||| |||||
Sbjct 4974 ATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCTTGTAACTCAT 4917
Query 1559 TGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTG-TGCTTC 1617
||||||||| |||||| || ||| |||| |||||||||||||||||| ||| | ||
Sbjct 4916 TGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACATTTGCTTTTT- 4858
Query 1618 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCA 1677
|||||||||||||||| |||||||| |||||||| | ||||| || || | |||||||
Sbjct 4857 ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCTTAGTCTACCA 4798
Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737
||||||||||||||||| |||||||| |||||||||| ||||||||| || ||| ||||
Sbjct 4797 GGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTTTGCTTCATTCGTCCCATTTGAT 4738
Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783
|| | ||||| |||||||||| ||||||||||||| |||| |||
Sbjct 4737 TGAGGACCACTGCTAACAATCTCAACTGCCTTTTTCTGCAAAC-CAT 4692
> AT1G40109.1 | Symbols: | transposable element gene | chr1:15155045-15158202
FORWARD LENGTH=3158
Length=3158
Score = 1022 bits (553), Expect = 0.0
Identities = 1441/1847 (78%), Gaps = 152/1847 (8%)
Strand=Plus/Minus
Query 11 ACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCATATACTCGATT 70
|||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 3151 ACCAACTTATCCTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCATATACTCGATT 3092
Query 71 TCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACTCTA 130
||||||||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||
Sbjct 3091 TCATCTGATGGCCTCCAGACTGCTGCATCATCTACATTCACTACATCTACCCAAACTCTA 3032
Query 131 GCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGCACA 190
|||||||| | |||| |||||||||||||||||| | |||||||| ||||||||||
Sbjct 3031 GCTGCATTCTCTGCCAAACGAACATGGTGTACCTTTTGATCTGGGTCTATTGAATGCATT 2972
Query 191 CGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTGATTG 250
|||||| || |||||||| ||||||||||||| |||||||||||||| ||||||||||
Sbjct 2971 CGTCCTACACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCACTTCTGATAA 2912
Query 251 GCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATAAACCAGGTTT 307
||||| | ||| ||||| | |||| ||||| || ||||||| ||||||||||| ||
Sbjct 2911 GCCTTCA-AACCTTCAGATGTT-TTTTGGCGCTGACA-TGTTACATTATAAACCAGGATT 2855
Query 308 AAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAAT-ACCGGA 365
|| ||||||||||| | | || | ||||| || ||| ||| | ||||| | ||||||
Sbjct 2854 AAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-AGACAAACTTACCGGA 2798
Query 366 GATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACAAAAGACTTTG 423
||||| | | |||||| ||| |||| | | |||||| ||||||| ||| ||||||||
Sbjct 2797 GATCTCCAT-AGAGGG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACAGGAGACTTTG 2743
Query 424 -AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCAACGGATTTTG 480
||| |||| | | || ||||||| | |||| ||||| || |||| | | |||| ||
Sbjct 2742 GAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCTGCAGATTCTG 2686
Query 481 TACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgcagtttgt-ga 538
||| || | || ||||| || || || | |||| ||||| || | | ||||| |
Sbjct 2685 AACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCCT-TTTGTTGC 2628
Query 539 acctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgctttccctg-c 592
|| || || ||||| || || || | | || ||| |||| | | ||| || |
Sbjct 2627 TCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTGTTGCTCCAT--TTTGT-TGAC 2575
Query 593 t-gatgctgctgattttcctactgatgctgctgct-TCCAATGG-TGATTTTCCTCTTGC 649
| | ||||||||| |||||| ||| |||| |||| | ||| | | || | | |
Sbjct 2574 TTGCTGCTGCTGACTTTCCTTTTGAGGCTGATGCTGT----TGGATAAGTTGA-T-T-G- 2523
Query 650 AGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTTTTCAAAG-AT 706
|| | || ||||||| |||| ||||||| | || || |||||| || |||||| || |
Sbjct 2522 AG-A-AA-TCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGTGGTG-TTTTCATAGGAA 2468
Query 707 CACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAGTATGTCACAT 765
||||||||| ||||||||||||| ||||| | |||||||||||||| |||||||||||
Sbjct 2467 -ACTTTGTGGGTAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGGTATGTCACAT 2410
Query 766 CCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACAAATATCTTT- 824
|||||||||| |||||||| || ||||| |||||||| | | |||| ||||||| ||||
Sbjct 2409 CCATCGTTGGACTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACAAATA-CTTTC 2351
Query 825 ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCTTGTGTCTGCC 882
||||| | || ||||||||||||||||| |||||||| | ||| || ||| ||||||||
Sbjct 2350 ACTGCACCAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CTTTTGTCTGCC 2293
Query 883 AACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTTGCATTTGTT- 940
|||||||||||||||||| ||| |||| || |||||||||||||||||||||| |||||
Sbjct 2292 AACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTTGCACTTGTTT 2234
Query 941 C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACATTGTGTTAAT 990
| | |||||||||| ||||| ||||| ||||| || | | || || | |
Sbjct 2233 CCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C-TTA-GT-A-T 2182
Query 991 AGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTTACCTGGGCTT 1048
|| || | | | |||| | ||||||| |||||| |||| | |||||||| ||
Sbjct 2181 -GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTTACCTGTGC-- 2132
Query 1049 CAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGCAGGCCATGCA 1107
|||||||||| | ||| || | ||| |||||| |||||||||||||| ||||||| ||
Sbjct 2131 -AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAACAGGCCAAGCT 2074
Query 1108 ATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCTCCAAAGGAAT 1167
||||| || |||||||||||||| || | ||||||| | || |||||||||||| ||
Sbjct 2073 ATCATCTGACCAACAGCTTTCTCCATAATTTCCATGTTAACTGCGGGTCTCCAAAGGTAT 2014
Query 1168 GCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCCTAAGGGACAG 1227
|||||| || |||| |||||||||||||| ||||||||||| ||||| |||||| |||
Sbjct 2013 GCTTCTTGTACAATCGCAGTGTCAATCAATACTTTAACATCTGTAGGACCTAAGCGACT- 1955
Query 1228 TC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACAT 1285
|| ||| |||| | ||| ||||||||||||| |||||||| ||||||||||| || |||
Sbjct 1954 TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCAACGGTTGCAT 1896
Query 1286 TAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTCACACTCTGT 1344
|| |||||||||||| | | |||||||| || ||||||||| || |||||||||||||
Sbjct 1895 CAGTACCAGCCCAATCCA-TCAAGACACACTTAGGTTGTGATCCTTGGTTCACACTCTGT 1837
Query 1345 AAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATAAATCAAA-GC 1401
| || ||| | ||| | | ||| | | ||| || || | || | |||||| |
Sbjct 1836 ATAAGGAATCAA-TAGGCTAT-TATTATCTAATT--AT--GT-ACCAAGAGATCAAAAGT 1784
Query 1402 ATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGGTGATTGTCTC 1461
||| ||| |||||||||||||| |||||||| ||||||| ||||||| ||||||||||
Sbjct 1783 ATCAAATAAAAGTGACTTACTCTTACAGCTGAGGTTTCACCAACTTCAGCTGATTGTCTC 1724
Query 1462 TGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TTA--TATAT-- 1500
||| || ||||||||| | |||| || || | || || | ||| | |||
Sbjct 1723 TGT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATTAGCTTTATGT 1666
Query 1501 A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCAT 1558
| || ||| ||||| || | |||||||| || || |||||||| ||||||| |||||
Sbjct 1665 ATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCTTGTAACTCAT 1608
Query 1559 TGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTG-TGCTTC 1617
||||||||| |||||| || ||| |||| |||||||||||||||||| ||| | ||
Sbjct 1607 TGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACATTTGCTTTTT- 1549
Query 1618 ACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCA 1677
|||||||||||||||| |||||||| |||||||| | ||||| || || | ||||| |
Sbjct 1548 ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCTTAGTCTACTA 1489
Query 1678 GGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGCATGTGAT 1737
||||||||||||||||| |||||||| |||||||||||||||||||| || ||| ||||
Sbjct 1488 GGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGTCCCATTTGAT 1429
Query 1738 GGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783
|| | |||| |||||||||| ||||||||||||| |||| |||
Sbjct 1428 TGAGGACCACTACTAACAATCTCAGCTGCCTTTTTCTGCAAAC-CAT 1383
Score = 616 bits (333), Expect = 6e-175
Identities = 763/959 (80%), Gaps = 76/959 (8%)
Strand=Plus/Minus
Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGA 1908
||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct 1200 ACTCACAATTTTTTCAGCCGCATTTGTATTCACTGGTGTTCCATCTTTCTTGGTCCGTGA 1141
Query 1909 CTTAACCCAAACCTTTAGGCGT-GTCACTTCAGAT-GGGTCTGCACTAGC-AGTTTTCT- 1964
||||||||||||||||| || | |||||||||| | |||||||||||| | ||||||||
Sbjct 1140 CTTAACCCAAACCTTTA-GCCTCGTCACTTCAG-TCGGGTCTGCACTA-CTAGTTTTCTG 1084
Query 1965 --AAACAAAAAATACACAAGTGTT--T-G-GA-CT---T-TGGGAAAA-GGCTGAGCAAT 2012
||||| || || | ||| | || | | | || | | |||| | ||||||
Sbjct 1083 AAAAACACAACATGC-CAA-TATTAGTAGCAAGCTAAGTGTTTTAAAATTTCAAAGCAAT 1026
Query 2013 ATGAACAATATAA-GT-GTA-GCA-AT---ATTACCATATCTTCTGCTAGTCTAACCATT 2065
| || || |||| | | ||| || ||||||||||||||||| |||||||||| |
Sbjct 1025 A--AAAAACATAACCTAACAGGCACATAAGATTACCATATCTTCTGCAAGTCTAACCA-T 969
Query 2066 CCC-CTGCGACTACAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCT 2124
||| ||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||
Sbjct 968 CCCTCTGCGACTACAAGTGTGAGGAATTTGGTTGCGCCTTCTCTCCTTGTAGCTATCGCT 909
Query 2125 TACAACCTAAC-A-GA-TG--AA-T-GTTAA-TTTCT--A-AGGAAAGATA--TAGATAA 2171
|| |||||||| | || || || | | ||| ||||| | || ||| ||| ||| |||
Sbjct 908 TATAACCTAACAATGATTGTTAATTAG-TAACTTTCTACATAGTAAATATACTTAGTTAA 850
Query 2172 ATTTACAAATTCC-AAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTTCACAAATTT 2230
| |||| | || || |||||||||||||| |||||||||| ||||||||||||
Sbjct 849 A---ACAACTCCCTCAA--CATACCTTAAATTCAGGGCTAGTTTTGCTCTTCACAAATTT 795
Query 2231 ACGCCAATCAAATGGAGAAATATTTTTAGGTCGCATG-TTCATCCTCT-CTTGGTTAGTC 2288
| ||| ||||||||||||| ||||||||||| || | |||||||||| | ||||| |||
Sbjct 794 TCTCCACTCAAATGGAGAAACATTTTTAGGTCTCA-GATTCATCCTCTGC-TGGTTTGTC 737
Query 2289 TTAGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATC 2348
|| |||||||||| || || |||||||||||||||||||| |||||||| ||||||||
Sbjct 736 TTTGCTTCTCTAAACTTAGTTACTTGCCTTGATTTCCAGGATCTCCACAAACATCCCATT 677
Query 2349 TGCTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAA 2408
||||||||||||| ||||||||| ||||| |||||||||||||||||||||| || ||||
Sbjct 676 TGCTTAAGCACTGCAACCTTTTGATACTCCTCATCTAGTTCAAACCTTGCCTTCAATCAA 617
Query 2409 AAACA-AAACA--GCTAAGTAC--TCA-CA-CCAATATA-T--AATA-AACTTGTAAATT 2457
||| ||| | | | | | | | | | || ||| | |||| || ||| |
Sbjct 616 TTACAGAAAAAGTGATTATTGCTGTGATAAGGAAAGATAGTCAAATATTAC-AAAAAAAT 558
Query 2458 TTACAC--AAATCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATT 2515
| || || | |||||| ||||||||||||||||| |||||||| |||||||||||||
Sbjct 557 AAAAACTGAAGTGTTACCTCGACAGATTTCCAGAGAAGTGTCCTGATTTCTTCACCTATT 498
Query 2516 TTTGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGAT 2575
|||||||| |||||||||||||| || |||||||| | | |||||||||| ||||||||
Sbjct 497 TTTGTCCAGCGATCAATTGTGATAGGGACGTGTTCACGGATCAATGCGCCTGCATATGAT 438
Query 2576 GCTAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTGAACTCTACTCTTACT 2635
|||| |||||||||||||||||||||||||||||||| | ||| |||| ||||| |||
Sbjct 437 GCTAACTTAACTGAGCCTTTACCAATAGGCTCTCCCATCATGGTGTACTCCACTCTCACT 378
Query 2636 CTGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACG- 2694
|||| |||||||||||| |||||||| |||| |||||||||||| || || ||||| |
Sbjct 377 CTGGCATTTGGATCCTTAGCAATATCTTTCATCCTAGTTGGTCCACGCTGCCTCTTG-GT 319
Query 2695 CTTTGGATCAGCA-CAATCATAATCCTC-AGATAATACAAGCTCTCCTTCAGCCTCTTC 2751
||| || | | || | || | ||| || ||||||| ||||||| ||||||| |||||
Sbjct 318 CTTAGGTTGAACAGCT-TCTTCATC-TCCAGATAATTCAAGCTCGCCTTCAGGTTCTTC 262
> AT3G32950.1 | Symbols: | transposable element gene | chr3:13495365-13498632
REVERSE LENGTH=3268
Length=3268
Score = 1013 bits (548), Expect = 0.0
Identities = 1446/1857 (78%), Gaps = 152/1857 (8%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
||| ||| | ||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct 3268 TCAGTAGGTCACCAACTTATCTTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 3209
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120
|||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||| ||
Sbjct 3208 ATACTCAATTTCATCTGATGGCCTCCAGACTGCTGCATCATCTACATTCACTACATCTAC 3149
Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180
|||||||||||||||||| | ||||| ||||||||||||||||| | |||||||| ||
Sbjct 3148 CCAAACTCTAGCTGCATTCTCTCCCAAATGAACATGGTGTACCTTTTGATCTGGGTCTAT 3089
Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240
||||||||| |||||| || |||||||| ||||||||||||| |||||||||||||| ||
Sbjct 3088 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCA 3029
Query 241 CTTCTGATTGGCCTTGATAA-CTTCAGCTACACTTTT-ACGCTGCA-ATGTTACAATATA 297
||||||||| ||||| | || |||||| || |||| |||| | |||||||| ||||
Sbjct 3028 CTTCTGATTAGCCTTCA-AACCTTCAGATA-TTTTTTGGCGCT-AACATGTTACATTATA 2972
Query 298 AACCAGG-TTTAATGCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAA 356
||||||| || || ||||||||||| | | || |||||| || ||| ||| | ||||
Sbjct 2971 AACCAGGATTAAACGCATGTAGAAATTTTATTAG--TCAATATGTCAAACCAA-AGACAA 2915
Query 357 A-ATACCGGAGATCTTC-TCAGAGGGAG-TTGTGAATCCAGC-AGCTGACTTTTCTTGAC 412
| |||||||||||| | | |||||| | ||||| || || | |||| ||||||| ||
Sbjct 2914 ACTTACCGGAGATCTCCGT-AGAGGG-GTTTGTG-AT---GCTAACTGAGTTTTCTTCAC 2861
Query 413 AAAAGACTTT-GAAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGC 469
| ||||||| |||| |||| | || | ||||||| | |||| ||||| || |||| |
Sbjct 2860 AGGAGACTTTGGAACTACTGTTG--GTTG-CTTCTCACCAAGAGATTTTGCAATTGTTCC 2804
Query 470 AACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctg 528
| |||| || ||| || | || ||||| || || || | |||| ||||| || |
Sbjct 2803 TGCAGATTCTGAACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACT--TT 2746
Query 529 cagtttg-tgaacctgatcctgctgctt-tc-cc-tgatg-ctgctgctgatgctgctgc 583
| |||| || || || || ||||| || || || | | || ||| | |||| |
Sbjct 2745 CCTTTTGTTGCTCC--ATTTTGTTGCTTCTCACCAAGA-GATTTCT-CTG-T--TGCTCC 2693
Query 584 -tttccctg-c-tgatgctgctgattttcctactgatgctgctgctTCCAATGG-TGATT 639
||| || | || ||||||||| |||||| ||| |||| ||| | ||| | |
Sbjct 2692 ATTTTGTTGACTTGCTGCTGCTGACTTTCCTTTTGAGGCTGATGC-T--GTTGGAT-AAG 2637
Query 640 TTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTG-ACATGTTGCATCTGTATG-GTT 697
|| || | |||| ||||||| |||| |||||| || || || |||||| | |||
Sbjct 2636 TT--GATT---G-AGAACTCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGT-GGTGTT 2585
Query 698 TTCA-AAGATCACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAG 755
|||| | || ||||||||| |||||||||||||| ||||| | |||||||||||||| |
Sbjct 2584 TTCATAGGA-AACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGG 2527
Query 756 TATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACA 815
||||||||||||||||||||||||||||| || ||||| |||||||| | | |||| |||
Sbjct 2526 TATGTCACATCCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACA 2467
Query 816 AATATCTTT-ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCT 872
|||| |||| ||||| || || ||||||||||||||||| |||||||| | ||| || ||
Sbjct 2466 AATA-CTTTCACTGCAGCAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CT 2410
Query 873 TGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTT 931
| |||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||
Sbjct 2409 TTTGTCTGCCAACGTCCTTCTGCAACAATAACGTCAT-TGTAAGACAAATCCAGTAGTTT 2351
Query 932 GCATTTGTT-C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACA 980
||| ||||| | | |||||||||| ||||| ||||| ||||| || | |
Sbjct 2350 GCACTTGTTTCCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C- 2296
Query 981 TTGTGTTAATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTT 1038
|| || | | || || | | | |||| | ||||||| |||||| |||| | |||
Sbjct 2295 TTA-GT-A-T-GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTT 2247
Query 1039 ACCTGGGCTTCAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGC 1097
||||| || |||||| ||| | ||| || | ||| |||||| |||||||||||||| |
Sbjct 2246 ACCTGTGC---AATGTCGTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAAC 2191
Query 1098 AGGCCATGCAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCT 1157
| |||| || ||||| || |||||| ||||||| || | ||||||| | || |||||
Sbjct 2190 AAGCCAAGCTATCATCTGACCAACAACTTTCTCCATAATTTCCATGTTAACTGCGGGTCT 2131
Query 1158 CCAAAGGAATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCC 1217
||||||| ||||||||||| ||| |||||||||||||| ||||||||||| ||||| ||
Sbjct 2130 CCAAAGGTATGCTTCTGGTACAACCGCAGTGTCAATCAATACTTTAACATCTGTAGGACC 2071
Query 1218 TAAGGGACAGTC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCA 1275
|||| ||| || ||| |||| | ||| ||||||||||||| |||||||| |||||||||
Sbjct 2070 TAAGCGACT-TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCA 2013
Query 1276 ACTTTTACATTAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTT 1334
|| || ||| || |||||||||||| | | |||| ||| || ||||||||| || |||
Sbjct 2012 ACGGTTGCATCAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTT 1954
Query 1335 CACACTCTGTAAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATA 1392
||||||||||| || ||| | ||| | | ||||| | ||| || || | || |
Sbjct 1953 CACACTCTGTATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAAGA 1901
Query 1393 AATCAAA-GCATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGG 1451
|||||| | ||| ||| ||||||||||||||||||||||| ||||||| |||||||
Sbjct 1900 GATCAAAAGTATCAAATAAAAGTGACTTACTCTTGCAGCTGAGGTTTCACCAACTTCAGC 1841
Query 1452 TGATTGTCTCTGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TT 1494
||||||||||||| || ||||||||| | |||| || || | || || | ||
Sbjct 1840 TGATTGTCTCTGT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATT 1783
Query 1495 A--TATAT--A-AA-TAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCT 1548
| | ||| | || ||| ||||| || | |||||||| || || |||||||| |||
Sbjct 1782 AGCTTTATGTATAAGTAGACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCT 1725
Query 1549 TGTAGCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACAC 1608
|||| |||||||||||||| |||||| || ||| |||| ||||||||||||||||||
Sbjct 1724 TGTAACTCATTGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACAT 1665
Query 1609 TTG-TGCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCT 1667
||| | || |||||||||||||||| |||||||| |||||||| | ||||| || ||
Sbjct 1664 TTGCTTTTT-ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCT 1606
Query 1668 CATTCTACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGT 1727
| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 1605 TAGTCTACCAGGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGT 1546
Query 1728 TGCATGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783
||| |||| || | |||| ||||||||| ||||||||||| | |||| |||
Sbjct 1545 CCCATTTGATTGAGGACCACTACTAACAATCTTAGCTGCCTTTTTCCGCAAAC-CAT 1490
> AT4G08060.1 | Symbols: | transposable element gene | chr4:4924776-4928259
REVERSE LENGTH=3484
Length=3484
Score = 990 bits (536), Expect = 0.0
Identities = 1442/1857 (78%), Gaps = 152/1857 (8%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
||| ||| | |||| ||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct 3484 TCAGTAGGTCACCATCTTATCCTTTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 3425
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120
||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||
Sbjct 3424 ATACTCGATTTCATCTGATGGCCTCCAGACTGCTGCATCATCTACATTCACTACATCTAC 3365
Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180
|||||||||||||||||| | ||||| |||||||||||||||||| | |||||||| ||
Sbjct 3364 CCAAACTCTAGCTGCATTCTCTCCCAAACGAACATGGTGTACCTTTTGATCTGGGTCTAT 3305
Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240
||||||||| |||||| || |||||||| ||||||||||||| |||||||||| ||| ||
Sbjct 3304 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTACCTTGCA 3245
Query 241 CTTCTGATTGGCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATA 297
||| ||||| ||||| | ||| ||||| | |||| || || || |||| || ||||
Sbjct 3244 CTTATGATTAGCCTTCA-AACCTTCAGATGTT-TTTTGGCGGTGACA-TGTTGCATTATA 3188
Query 298 AACCAGGTTTAAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAA 356
||||||| |||| ||||||||||| | | || | ||||| || ||| ||| | ||||
Sbjct 3187 AACCAGGATTAAACGCATGTAGAAATTTTATTAG-T-CAATATGTCAAACCAA-AGACAA 3131
Query 357 AAT-ACCGGAGATCTTC-TCAGAGGGAGTT-GTGAATCCAGCAGCTGACTTTTCTTGACA 413
| | ||||||||||| | | |||||| ||| |||| | | |||||| ||||||| |||
Sbjct 3130 ACTTACCGGAGATCTCCGT-AGAGGG-GTTTGTGA-TGCT--AGCTGAGTTTTCTTCACA 3076
Query 414 AAAGACTTTG-AAC--CTGTAGCTGTGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCA 470
|||||||| ||| |||| | | || ||||||| | |||| ||||| || |||| |
Sbjct 3075 GGAGACTTTGGAACTACTGTTGGT-TG--CTTCTCACCAAGAGATTTTGCAATTGTTCCT 3019
Query 471 ACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctg-ctgctgc 529
| |||| || ||| || | || ||||| || || || | |||| ||||| || | |
Sbjct 3018 GCAGATTCTGAACCCTTGGCTGCAGATACCTGAATAGAAGAATTATGACCTGACTT-TCC 2960
Query 530 agtttgt-gaacctgatcctgctgctt-tc-cct-gatgctg-ctgctgatgctgc-tgc 583
||||| | || || || ||||| || || || | | || ||| |||| | |
Sbjct 2959 T-TTTGTTGCTCC--ATTTTGTTGCTTATCACCAAGA-GATTTCT-CTGTTGCTCCAT-- 2907
Query 584 tttccctg-ct-gatgctgctgattttcctactgatgctgctgctTCCAAT-GG-TGATT 639
||| || || | ||||||||| |||||| ||| | |||| | || | || | | |
Sbjct 2906 TTTGT-TGACTTGTTGCTGCTGACTTTCCTTTTGA-G--GCTGAT-CCTGTTGGATAAGT 2852
Query 640 TTCCTCTTGCAGCAGAAGTCTGAAGTGGAGATTTCTGA-CATGTTGCATCTGTA-TGGTT 697
| | | | || | | ||||||| |||| ||||||| | || || |||||| || ||
Sbjct 2851 TGA-T-T-G-AG-A-AC-TCTGAAGAGGAGCTTTCTGAAC-TGCTGAATCTGTGGTG-TT 2801
Query 698 TTCAAAG-ATCACTTTGTGGACAGGCCATGCTACATAAGACAT-TAAACAGTCCTCAAAG 755
|||| || | ||||||||| |||||||||||||| ||||| | |||||||||||||| |
Sbjct 2800 TTCATAGGAA-ACTTTGTGGGCAGGCCATGCTACAAAAGAC-TGTAAACAGTCCTCAAGG 2743
Query 756 TATGTCACATCCATCGTTGGCCTCCATATAAAAGTCTCTGGTTGAAGAACTGCATCGACA 815
||||||||||||||||||||||||||||| || ||||| |||||||| | | |||| |||
Sbjct 2742 TATGTCACATCCATCGTTGGCCTCCATATGAACGTCTCAGGTTGAAGTATTACATCCACA 2683
Query 816 AATATCTTT-ACTGCTGCTGGCCCGAGAGGAAGCCCATTGACTAATGC-G-TTGTGTTCT 872
|||| |||| ||||| || || ||||||||||||||||| |||||||| | ||| || ||
Sbjct 2682 AATA-CTTTCACTGCAGCAGGTCCGAGAGGAAGCCCATTAACTAATGCAGATTG-GT-CT 2626
Query 873 TGTGTCTGCCAACGTCCTTCTGCAACAACAACCTCATCTG-AAGACAAATCCAGTAGTTT 931
| |||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||
Sbjct 2625 TTTGTCTGCCAACGTCCTTCTGCAACAATAACGTCAT-TGGAAGACAAATCCAGTAGTTT 2567
Query 932 GCATTTGTT-C-A---------CTTGGTCCCTATCAAAAACATTGAAACCCAAAAATACA 980
|| ||||| | | |||||||||| ||||| ||||| ||||| || | |
Sbjct 2566 CCACTTGTTTCCATAAGTGGGTCTTGGTCCCTGTCAAACACATT-AAACC-AATG-T-C- 2512
Query 981 TTGTGTTAATAGAAGATCATTATTCTATATATGAGTATGAGAATGAATA-ATAA-ACTTT 1038
|| || | | || || | | | |||| | ||||||| |||||| |||| | |||
Sbjct 2511 TTA-GT-A-T-GAC--TC-TGAAT--ATAT-T-AGTATGACTCTGAATATATAACATTTT 2463
Query 1039 ACCTGGGCTTCAATGTCTTCTTG-TTGGAGATCCTCTTCTAGGTTAACACACATAGCAGC 1097
||||| || |||||||||| | ||| || | ||| |||||| |||||||||||||| |
Sbjct 2462 ACCTGTGC---AATGTCTTCTGGATTG-AGCTTCTCCTCTAGGCTAACACACATAGCAAC 2407
Query 1098 AGGCCATGCAATCATATGTCCAACAGCTTTCTCAATGGTGAACATGTTAGCCGCAGGTCT 1157
|||||| || ||||| | |||||| ||||||| || | ||||||| | || |||||
Sbjct 2406 AGGCCAAGCTATCATCTAACCAACAACTTTCTCCATAATTTCCATGTTAACTGCGGGTCT 2347
Query 1158 CCAAAGGAATGCTTCTGGTTCAATAGCAGTGTCAATCAAGACTTTAACATCCGTAGGGCC 1217
||||||| ||||||||||| |||| |||||||||||||| |||||||||| ||||| ||
Sbjct 2346 CCAAAGGTATGCTTCTGGTACAATCGCAGTGTCAATCAATACTTTAACATTTGTAGGACC 2287
Query 1218 TAAGGGACAGTC-ATTAACTAAT-TCACCCGGATCAGAAGAAATAATACATCCCTCAGCA 1275
|||| ||| || ||| |||| | ||| ||||||||||||| |||||||| |||||||||
Sbjct 2286 TAAGCGACT-TCCATTGACTA-TCTCATCCGGATCAGAAGATATAATACAACCCTCAGCA 2229
Query 1276 ACTTTTACATTAGAACCAGCCCAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTT 1334
|| || ||| || |||||||||||| | | |||| ||| || ||||||||| || ||
Sbjct 2228 ACGGTTGCATCAGTACCAGCCCAATCCA-TCAAGATACACTTAGGTTGTGATCCTTGGTC 2170
Query 1335 CACACTCTGTAAAAACAAT-AGGTAGACAAAATATCAGGTGATTGTATCTGTTAG-AATA 1392
||||||||||| || ||| | ||| | | ||||| | ||| || || | || |
Sbjct 2169 CACACTCTGTATAAGGAATCAA-TAGGCTAT-TATCATCTAATT--AT--GT-ACCAAGA 2117
Query 1393 AATCAAA-GCATCTGATATGAGTGACTTACTCTTGCAGCTGAGTTTTCACCTACTTCAGG 1451
|||||| | ||| ||| |||||| |||||||||||||||| ||||||| |||||||
Sbjct 2116 GATCAAAAGTATCAAATAAAAGTGACCTACTCTTGCAGCTGAGGTTTCACCAACTTCAGC 2057
Query 1452 TGATTGTCTCTGTTAC-aaaaaaaaaGA-AAAG--AA------GT-C-AA---AT-G-TT 1494
||||||||| ||| || ||||||||| | |||| || || | || || | ||
Sbjct 2056 TGATTGTCTTTGT-ACCAAAAAAAAA-ACAAAGTCAAATATATGTACTAACCGATTGATT 1999
Query 1495 A--TATATAAATA-GTTAA---GTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCT 1548
| | ||| ||| || || ||| || | |||||||| || || |||||||| |||
Sbjct 1998 AGCTTTATGTATAAGTAAACAAGTGTT-TA-CATGGTTCTTTATCTTGTCAATTACTTCT 1941
Query 1549 TGTAGCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACAC 1608
|||| |||||||||||||| |||||| || ||| |||| ||||||||||||||||||
Sbjct 1940 TGTAACTCATTGACCTTCTGCTGGAGCTGGTCCTGTTTCTGTTGCATTTCAGCCATACAT 1881
Query 1609 TTG-TGCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCT 1667
||| | || |||||||||||||||| |||||||| |||||||| | ||||| || ||
Sbjct 1880 TTGCTTTTT-ACTTGGAAACAAGCTAGTTTGGTCTTGTTCATATTTCTTCCCATCGCCCT 1822
Query 1668 CATTCTACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGT 1727
| ||||||| |||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct 1821 TAGTCTACCACGATTGTCAGGCCCTAAGAGTTGGCTAAGTGAATCTTGTGCTTCATTCGT 1762
Query 1728 TGCATGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAACTCAT 1783
||| |||| || | ||||| |||||||||| ||||||||||||| |||| |||
Sbjct 1761 CCCATTTGATTGAGGACCACTGCTAACAATCTCAGCTGCCTTTTTCTGCAAAC-CAT 1706
Score = 536 bits (290), Expect = 5e-151
Identities = 707/895 (79%), Gaps = 81/895 (9%)
Strand=Plus/Minus
Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTACGTGA 1908
||||||||| |||||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct 1523 ACTCACAATTTTTTCAGCCGCATTTGTATTCACTGGTGTTCCATCTTTCTTGGTCCGTGA 1464
Query 1909 CTTAACCCAAACCTTTAGGCGT-GTCACTTCAGATGGGTCTGCACTAGCAGTTTTCT--- 1964
||||||||||||||||| || | |||||||||| |||||||||| || |||||||||
Sbjct 1463 CTTAACCCAAACCTTTA-GCCTCGTCACTTCAGTTGGGTCTGCATTACCAGTTTTCTGAA 1405
Query 1965 AAACAAAAAATACACAAGTGTT--T-G-GA-CT---T-TGGGAAAA-GGCTGAGCAATAT 2014
||||| || || | ||| | || | | | || | | |||| | |||||||
Sbjct 1404 AAACACAACATGC-CAA-TATTAGTAGCAAGCTAAGTGTTTTAAAATTTCAAAGCAATA- 1348
Query 2015 GAACAATATAA-GT-GTA-GCA-AT---ATTACCATATCTTCTGCTAGTCTAACCATTCC 2067
|| || |||| | | ||| || ||||||||||||||||| |||||||||| |||
Sbjct 1347 -AAAAACATAACCTAACAGGCACATAAGATTACCATATCTTCTGCAAGTCTAACCA-TCC 1290
Query 2068 C-CTGCGACTACAAGTGTGTGGAATCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTA 2126
| ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||
Sbjct 1289 CTCTGCGACTACAAGTGTGAGGAATCTGGTTGCGCCTTCTCTCCTTGTAGCTATCGCTTA 1230
Query 2127 CAACCTAAC-A-GA-TG--AA-T-GTTAA-TTTCT--A-AGGAAAGATA--TAGATAAAT 2173
|||||||| | || || || | | ||| ||||| | || ||| ||| ||| ||||
Sbjct 1229 TAACCTAACAATGATTGTTAATTAG-TAACTTTCTACATAGTAAATATACTTAGTTAAA- 1172
Query 2174 TTACAAATTCC-AAATGCATACCTTAAATTCTTTGCTAGTTTTGAGCTTCACAAATTTAC 2232
|||| | || || |||||||||||||| |||||||||| |||||||||||| |
Sbjct 1171 --ACAACTCCCTCAA--CATACCTTAAATTCAGGGCTAGTTTTGCTCTTCACAAATTTTC 1116
Query 2233 GCCAATCAAATGGAGAAATATTTTTAGGTCGCATG-TTCATCCTCT-CTTGGTTAGTCTT 2290
|| | | | | | ||||||||| || | |||||||||| | ||||| |||||
Sbjct 1115 TCC-A-C---T-G-G------TTTTAGGTCTCA-GATTCATCCTCTGC-TGGTTTGTCTT 1071
Query 2291 AGCTTCTCTAATGTTTGTAACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATCTG 2350
|||||||||| || || |||||||||||||||||||| |||||||| |||||||| ||
Sbjct 1070 TGCTTCTCTAAACTTAGTTACTTGCCTTGATTTCCAGGATCTCCACAAACATCCCATTTG 1011
Query 2351 CTTAAGCACTGTAACCTTTTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAAAA 2410
||||||||||| ||||||||| ||||| |||||||||||||||||||||| || ||||
Sbjct 1010 CTTAAGCACTGCAACCTTTTGATACTCCTCATCTAGTTCAAACCTTGCCTTCAATCAATT 951
Query 2411 ACA-AAACA--GCTAAGTAC--TCA-CACCAATATATAAT-AAA-CTT-GTAAATTTTAC 2461
||| ||| | | | | | | | | | || | ||| | ||| || ||| ||
Sbjct 950 ACAGAAAAAGTGATTATTGCTGTGATAAGGAA-AGATAGTCAAATATTACAAAAAAATAA 892
Query 2462 ACA---AA-TCTTACCTGGACAGATTTCCAGAGAACTGTCCTGACTTCTTCACCTATTTT 2517
| | || | |||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 891 AAAGTGAAGTGTTACCTGGACAGATTTCCAGAGAAGTGTCCTGATTTCTTCACCTATTTT 832
Query 2518 TGTCCAACGATCAATTGTGATTGGAACGTGTTCTCTTACCAATGCGCCTACATATGATGC 2577
|||||| |||||||||||||| || |||||||| | | |||||||||| ||||| ||||
Sbjct 831 TGTCCAGCGATCAATTGTGATAGGGACGTGTTCACGGATCAATGCGCCTGCATATAATGC 772
Query 2578 TAGTTTAACTGAGCCTTTACCAATAGGCTCTCCCATGTTAGTG-AACTCTACTCTTACTC 2636
|| |||||||||||||||||||||||||||||||| | ||| || || ||||| ||||
Sbjct 771 TAACTTAACTGAGCCTTTACCAATAGGCTCTCCCATCATGGTGTAA-TCCACTCTCACTC 713
Query 2637 TGGTATTTGGATCCTTGGCAATATCCTTCAGCCTAGTTGGTCCTCGATGTCTCTT 2691
||| |||||||||||| |||||||| |||| |||||||||||| || || |||||
Sbjct 712 TGGCATTTGGATCCTTAGCAATATCTTTCATCCTAGTTGGTCCACGCTGCCTCTT 658
> AT1G36630.1 | Symbols: | transposable element gene | chr1:13840145-13847625
REVERSE LENGTH=7481
Length=7481
Score = 531 bits (287), Expect = 2e-149
Identities = 733/937 (78%), Gaps = 75/937 (8%)
Strand=Plus/Minus
Query 1849 ACTCACAATCTTTTCAGCAGCATTCGTATTCACTGGTGTACCATCTTTCTTAGTAC-GTG 1907
||||||||| |||||||| |||||||||||||||||||| ||||||||||| || | |||
Sbjct 3922 ACTCACAAT-TTTTCAGCCGCATTCGTATTCACTGGTGTTCCATCTTTCTTGGT-CTGTG 3865
Query 1908 ACTTAACCCAAACCTTTAGGCGT-GTCACTTCAGATGGGTCTGCACTAGCAGTTTTCTAA 1966
|||||||||| ||| ||| || | |||||||||| |||||| |||||| ||||||||| |
Sbjct 3864 ACTTAACCCAGACCATTA-GCCTCGTCACTTCAGCTGGGTCCGCACTACCAGTTTTCTGA 3806
Query 1967 ACAA-A-AA-AT-ACACAAGT-GTTTG-GACTTTGGGAAAAGGCTGAGCAATATGAACAA 2020
|||| | || || ||| | | | | | | ||| |||| || | || | |||
Sbjct 3805 ACAACACAACATGCCACTATTAG-TAGTAAGTTTAATAAAA-ACT---C--TA--AGCAA 3755
Query 2021 TATAAGTGTAGCAATATTACCATATCTTCTGCTAGTC-TAACCATTCCC-CTGCGACTAC 2078
|| || | || | || || ||||||| |||| | |||||| |||| |||||||||
Sbjct 3754 TA-AA----A--AACA-TAACA-ATCTTCTACTAG-CTTAACCA-TCCCTTTGCGACTAC 3706
Query 2079 AAGTGTGTGGAA-TCTGATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAG 2137
|||| || ||| || | ||||||||||||||||||||| ||||||||| ||||||| |
Sbjct 3705 AAGTATGAAGAATTC-GGTTGCGCCTTCTTTCCTTGTAGTTATCGCTTATAACCTAA-AA 3648
Query 2138 ATGAATGTTAATTTCTAA--GGAAAGAT-ATAGATAAA-TT--TACAAATTCCAAATGCA 2191
|||| |||||||| ||| | || ||| ||||| || | ||| ||| ||
Sbjct 3647 ATGATTGTTAATTAGTAACTTTCTATATAATAAATAAACTTAGTTTTTTTTCTAAAAACA 3588
Query 2192 TACCTTAAATTCTTTGCT-AGTTTTGAGCTTCACAAATTTACGCCAATCAAATGGAGAAA 2250
||||||| |||| ||| | ||||| |||||| ||||| | ||| |||||||||||||
Sbjct 3587 TACCTTACATTCAGGGCTCA-TTTTGCTCTTCACGAATTTTCTCCACTCAAATGGAGAAA 3529
Query 2251 TATTTTTAGGTCGCATGTTCATCCTCT-CTTGGTTAGTCTTAGCTTCTCTAATGTTTG-T 2308
|||||||||||||| |||||||||| | ||||| ||||| |||||||||| ||| |
Sbjct 3528 CATTTTTAGGTCGCACATTCATCCTCTGC-TGGTTTGTCTTTGCTTCTCTAA-ACTTGAT 3471
Query 2309 AACTTGCCTTGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTT 2368
|||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 3470 TACTTGCCTAGATTTCCAGGACCTCCACAAACATCCCATCTGCTTAAGCACTGCAACCTT 3411
Query 2369 TTGGTACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAAAAACA-AAACAGCTAAG-TA 2426
||| ||||| |||||||||||||||||||||| || |||| ||| ||| | ||| |
Sbjct 3410 TTGATACTCCTCATCTAGTTCAAACCTTGCCTTCAATCAATTACAGAAA-A--AAAGAGA 3354
Query 2427 CTCACACCAATATATAA-TA-A-ACTTGT-AAATTTTACACAAATCTTACCTGGACAGAT 2482
| | | | | |||| | | | | || |||| ||||| ||| | | || || |
Sbjct 3353 TTGATA-TAGT-GATAAGGACAGA-TAGTCAAATATTACA-AAAAAAGA-GT-GA-AG-T 3302
Query 2483 TTCCAGAGAACTGTCCTGACT-TCTTCACCTATTTTTGTCCAACGATCAATTGTGATTGG 2541
||||||||| |||||||| | ||||||||| |||||||||| |||||||||||||| ||
Sbjct 3301 GTCCAGAGAAGTGTCCTGA-TATCTTCACCTGTTTTTGTCCAGCGATCAATTGTGATAGG 3243
Query 2542 AACGTGTTCTCTTACCAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTTTACCAAT 2601
|||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 3242 GACGTGTTCTCGGACCAATGCGCCTGCATATGATGCTAACTTAACTGAGCCTTTACCAAT 3183
Query 2602 AGGCTCTCCCATGTTAGTGA-ACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATAT 2660
|||||||||||| | || | |||| || || ||||| | |||||||||||| |||||||
Sbjct 3182 AGGCTCTCCCATCATGGT-ATACTCCACGCTGACTCTTGCATTTGGATCCTTAGCAATAT 3124
Query 2661 CCTTCAGCCTAGTTGGTCCTCGATGTCTCTTACG-CTTTGGATCAGCA-CAATCATAATC 2718
| |||| |||||||||||| || || ||||| | ||| || | | | || || | |||
Sbjct 3123 CTTTCATCCTAGTTGGTCCACGTTGCCTCTTG-GTCTTAGGTTGAACTGCA-TCTTCATC 3066
Query 2719 CTC-AGATAATACAAGCTCTCCTTCAGCCTCTTCCAC 2754
|| ||||||| ||||||| ||||||| ||||||||
Sbjct 3065 -TCCAGATAATTCAAGCTCGCCTTCAGGTTCTTCCAC 3030
Score = 396 bits (214), Expect = 8e-109
Identities = 441/548 (80%), Gaps = 25/548 (5%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
||| ||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||
Sbjct 7481 TCAGTAGATCTCCAACTTATTCATTGGCCATGCAATTGATGAACCAAGTGAATCTCTCAT 7422
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCAC 120
|||||||||||||| ||||||||||||||||||||||||||||| || |||| ||| |
Sbjct 7421 ATACTCGATTTCATTTGATGGCCTCCAAACTGCTGCATCATCTACATTAACTACATCTAT 7362
Query 121 CCAAACTCTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGAT 180
|||||||||||||||||| ||||||||||||||||||| |||||| | ||| |||||||
Sbjct 7361 CCAAACTCTAGCTGCATTCTCCCCCAAGCGAACATGGTGCACCTTTTGATCTTGGTCGAT 7302
Query 181 TGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACA 240
||||||||| |||||| || |||||||| ||||||||||||| |||||||||||||| ||
Sbjct 7301 TGAATGCACTCGTCCTGCACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCA 7242
Query 241 CTTCTGATTGGCCTTGATAAC-TTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATA 297
||||||||| ||||| | | | ||||| | | |||| ||||| || ||||||| ||||
Sbjct 7241 CTTCTGATTAGCCTTCA-ATCCTTCAGATGCT-TTTTGGCGCTGACA-TGTTACATTATA 7185
Query 298 AACCAGGTTTAAT-GCATGTAGAAAAATA-ACCAGATTCAATAGGTAAAAAC-AATAAAC 354
||||| | |||| | ||||| |||| | | ||| |||||| || ||| | || ||||
Sbjct 7184 AACCAAGATTAAACGGATGTA-AAAATTTTATTAGAGTCAATATGTCAAA-CTAACAAAC 7127
Query 355 AAAAT-ACCGGAGATCTTCTCAGAGGG-AGTTGTGAATCC-AGCAGCTGACTTTTCTTGA 411
||| | || |||||||| | ||||||| | |||||| | | || | ||| |||||| |
Sbjct 7126 AAACTTACAGGAGATCTCCGCAGAGGGGA-TTGTGA-TGCTAG-A--TGAGATTTCTTCA 7072
Query 412 CAAAAGACTTTG-AACCTG-TAGCTG-TGGACTTCTCAGCTAGAGCTTTTGAAACTGTTG 468
|| |||||||| ||| | | |||| | | ||||||| | |||| || || || ||||
Sbjct 7071 CAGGAGACTTTGGAAC-TACT-GCTGGTTG-CTTCTCACCAAGAGATTATGCAATTGTTC 7015
Query 469 CAACGGATTTTGTACCTTTTGTTGTAGATATCTCAAGGGATGGCTTATAAcctgctgctg 528
| | |||| || |||||| | || ||||| || || || | |||||||||| |||||
Sbjct 7014 CTGCAGATTCTGAACCTTTGGCTGCAGATACCTTAATAGAAGAATTATAACCTGATGCTG 6955
Query 529 cagtttgt 536
| |||||
Sbjct 6954 CCTTTTGT 6947
Score = 254 bits (137), Expect = 5e-66
Identities = 242/293 (83%), Gaps = 6/293 (2%)
Strand=Plus/Minus
Query 1493 TTATATATAAATAGTTAAGTGCACTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTA 1552
|||| ||||||||| |||||| | ||||||||||| ||||| ||||| || |||||||
Sbjct 4353 TTATGTATAAATAGATAAGTG--TTTACCTGGTTCTTTATTTTGTCAATCACTTCTTGTA 4296
Query 1553 GCTCATTGACCTTCTTCTGGAGATGAAGCTGATTCTCTTGCATTTCAGCCATACACTTGT 1612
|||| ||||||||| ||||||| | ||| |||| |||||||||||||||| | ||||
Sbjct 4295 ACTCAGTGACCTTCTACTGGAGAGGGTCCTGCTTCTATTGCATTTCAGCCATATATTTGT 4236
Query 1613 GCTTCACTTGGAAACAAGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTC 1672
|| |||||||||||||||| ||||| || |||||||| | ||||| || |||| ||
Sbjct 4235 TTTTTACTTGGAAACAAGCTAGTTTGGTTTTGTTCATATTTCTTCCCATCGCCCTCAGTC 4176
Query 1673 TACCAGGATTGTCAGGCCCTAACAGTTGGCTTAGTGAATCTTGTGCTTCATTTGTTGC-A 1731
| ||||||||||||||||||||||||||||| |||||||||||||||||||| || | |
Sbjct 4175 TCCCAGGATTGTCAGGCCCTAACAGTTGGCTAAGTGAATCTTGTGCTTCATTC-TTCCCA 4117
Query 1732 TGTGATGGATTATCACTGTTAACAATCTCCTCTGCCTTTTTCTG-AAAC-TCA 1782
| |||| || | ||||| |||||||||| |||||||||| || |||| |||
Sbjct 4116 TTTGATTGAGGACCACTGCTAACAATCTCAGCTGCCTTTTTTTGCAAACATCA 4064
> AT1G41930.1 | Symbols: | transposable element gene | chr1:15685411-15695693
FORWARD LENGTH=10283
Length=10283
Score = 525 bits (284), Expect = 1e-147
Identities = 1140/1531 (74%), Gaps = 147/1531 (10%)
Strand=Plus/Minus
Query 666 GGAGATTTCTGACATGTTGCATCTGTATG-GTTTTCAAAGATC-ACTTTGTGGACAGGCC 723
||||||| ||||| |||||||||| | || ||||||||||| | ||||||| |||||||
Sbjct 1613 GGAGATTCCTGACCTGTTGCATCT-TTTGTGTTTTCAAAGA-CAACTTTGTTCACAGGCC 1556
Query 724 ATGCTACATAAGACATTAAACAGTCCTCAAAGTATGTCACATCCATCGTTGGCCTCCATA 783
||| |||| |||| | || ||| ||||||| |||||| ||||| || || || |||| |
Sbjct 1555 ATGATACAAAAGATAATAGACAATCCTCAAGGTATGTTACATCAATAGTAGGTGTCCAGA 1496
Query 784 TAAAAGTCTCTGGTTGAAGAACTGCATCGACAAATATCTTTACTGC-TGCTGGCCCGAGA 842
|||| || || |||||| | || |||| ||||||||||| ||||| | ||| | ||||
Sbjct 1495 TAAATGTATCAGGTTGATGTACCACATCTACAAATATCTTCACTGCAT-TTGGTCTGAGA 1437
Query 843 GGAAGCCCATTGACTAATGCGT-T-GTGTTCTTGTGTCTGCCAACGTCCTTCTGCAACAA 900
|| | |||||| ||||| | || | | ||||||||||||||||||| ||| ||||||
Sbjct 1436 GGTATCCCATTTACTAA-G-GTATCACGATCTTGTGTCTGCCAACGTCTTTCAGCAACAT 1379
Query 901 CAACCTCATCTGAAGACAAATCCAGTAGTTTGCATTTGTTCACTTGGTCCCT-A-T-CAA 957
| || ||||||||||||||||||||||| ||||||||||||| | | | | | | |
Sbjct 1378 CCACGTCATCTGAAGACAAATCCAGTAGCTTGCATTTGTTCA-TCGCTGAATAAGTCCTT 1320
Query 958 AAACATTG--AAACCCAAAAATACATTGTGTTAATAGAAGAT-CAT-TATTCTA-TA-TA 1011
| ||| |||| || ||| | ||||||| | | ||| ||| | | || ||
Sbjct 1319 TGGCTTTGTCAAACACATTCATAGAACATGTTAAT---ACTTCCATATATAC-ATTATTA 1264
Query 1012 TGAGT-ATG-AGAATGAATAATAAACTTTACCTGGGCTTCAATGTCTTCTTGTTGGAGAT 1069
| | | ||| || |||||| ||||||||||||| || |||||||| || |||| | |
Sbjct 1263 T-ACTCATGAAG-ATGAATCATAAACTTTACCTCTTCTGCAATGTCTCCTGGTTGTTGCT 1206
Query 1070 CCTCT-TCTAGGTTAACACACATAGCA-GCAGGCCATGCAATCATATGT-CC---AACAG 1123
| | | | |||||||||| || ||| | |||||||| |||||||| | | || |||||
Sbjct 1205 CATATAT-TAGGTTAACATACTTAG-AGGCAGGCCACGCAATCATCT-TACCGATAACAG 1149
Query 1124 CTTTCTCAATGGTGAACATGTT-AGCCGCAGGTCTCCAAAGGA-ATGCT-TCTGGTTCAA 1180
| ||||| ||| | ||||| || | |||||||||||| || ||| | |||||| | |
Sbjct 1148 --AT-TCAATTGTGCATATGTTAAG-CACAGGTCTCCAAA-GATATG-TGTCTGGTACCA 1095
Query 1181 TAGCAGTGTCAATCAAGACTTTAACATCCGTA-GGGCCTAAGGGACAGTCATTAACTAAT 1239
|||||||||||| ||| ||||| ||||| | | |||||||| |||| ||||| |||||
Sbjct 1094 TAGCAGTGTCAACCAACACTTTGACATCAG-ATGGGCCTAACCGACAATCATTCACTAAG 1036
Query 1240 TCACCCGGATCAGAAGAAATAATACATCCCTCAGCAACTTTTACATTA-GA--ACCAGCC 1296
||| | |||||||||| || |||| |||||| |||| || ||| | | ||||| |
Sbjct 1035 TCATCTGGATCAGAAGTTATTATACGCCCCTCAACAACAGTTGCATCACCATTACCAGTC 976
Query 1297 CAATCAAGT-AAGACACATTTTGGTTGTGATTTTTTGTTCACACTCTGTAAAAACAATAG 1355
||||||| | |||| ||| || ||||||||| ||||||| || |||| ||||| ||||
Sbjct 975 CAATCAA-TCAAGATACACTTAGGTTGTGATCTTTTGTTAACGCTCTATAAAATTAATA- 918
Query 1356 GTAGACAAAATA-TCAGGTGATTGTATCTGTTAGAATAAATCAAAGCATCTGATAT-GAG 1413
|||| || || | ||| ||| || | |||||| | | | || |||||| |
Sbjct 917 -AAGACTAATTACTAAGG-CATT-CCTCAAACA-AATAAAAC-ATGGATTTGATATCAAT 863
Query 1414 T---GACTTACTCTTGCAGCTGAGTTTTCACCTA-CTTCAGG-TGATTGTCTCTGTTACa 1468
| ||||||||| |||||||||||| | | | | ||||| | |||||||||||||||
Sbjct 862 TACAAACTTACTCTAGCAGCTGAGTTTGAAGC-AGCATCAGGCT-ATTGTCTCTGTTACA 805
Query 1469 aaaaaaaaGAAAAG--AAGTCAAATGTTAT-AT--AT-AA---ATAGT-TAAGT---GCA 1515
|||| ||| |||| || || | |||||| || || || | ||| ||| | | |
Sbjct 804 AAAATAAACCAAAGTCAAATCTAGTGTTATAATGCATCAAGTTAAAGTATAATTAAAGAA 745
Query 1516 ----CTAACCTGGTTCTTCATTTTCTCAATTACATCTTGTAGCTCATTGACCTTCT-TCT 1570
||||| |||||||| ||||| |||||||||||||||| |||||||||||| | ||
Sbjct 744 GTGTCTAACTTGGTTCTTTATTTTGTCAATTACATCTTGTAACTCATTGACCTT-TAACT 686
Query 1571 GGAGATGAAGC-TGATTCT-CTTGCATTTCAGCCATACACTTGTGCTTCACTTGGAAACA 1628
||||||| ||| || || | ||| | |||||||||||||||||| |||| |||||||||
Sbjct 685 GGAGATG-AGCTTGCTT-TGCTTCCGTTTCAGCCATACACTTGTTTTTCATTTGGAAACA 628
Query 1629 AGCTAACTTGGTCTTATTCATATTGCGACCCATTGCTCTCATTCTACCAGGATTGTCAGG 1688
||||| |||||||||||||| || ||||||||||| ||||||| |||||||||||||||
Sbjct 627 TGCTAATTTGGTCTTATTCATGTTTCGACCCATTGCCCTCATTCGACCAGGATTGTCAGG 568
Query 1689 CCCTAA-CAGTTGGCTTAGTGAATCTTGTG-CTTCATTTGTTGCATG-TGATGGATTATC 1745
|| || |||||||| ||||||||||| | ||||| ||| | |||||| ||||
Sbjct 567 TCC-AAGTAGTTGGCTAAGTGAATCTTG-GCCTTCAAAACAAGCA-GATGATGGCGTATC 511
Query 1746 ACTGTTAACAATCTCCT-CTGCCTTTTTCTGA--AACTCATAAGATACATATTAAAATAT 1802
||| || ||||||| || ||||| | ||| | || | | ||||||| ||| | || |
Sbjct 510 ACTTTTGACAATCT-CTGATGCCTCTCTCT-ATCAAGT-ACAAGATACGGATTCACATGT 454
Query 1803 CAAGTGTGATTCAAATGCCA-AAATGCAAATCATTAGAAGCAA-A----ATAACTCACAA 1856
| ||| || ||| | | |||| |||| | ||| | ||| | ||||||||||
Sbjct 453 ----TATGA-TCTAATTCTAGCAATGAAAAT-AATAGTA-CAAGATCTTGTAACTCACAA 401
Query 1857 TCTTTTCAGCAGCATTCGTA-TTCACTGGTGTACCATC-TTTCTTAGTACGTGACTTAAC 1914
|||||||||| ||||| || |||||| |||||||||| |||| ||||||||||||| |
Sbjct 400 TCTTTTCAGCCGCATT-TTATTTCACTAGTGTACCATCTTTTC-TAGTACGTGACTTGAT 343
Query 1915 CCAAACCTTTAGGCGTGTCACTTCAGA-TGGG-TCTGCACTAGCAGTTTTCT-A---A-A 1967
||| |||| || | || || || | | |||| | || ||| | |||||| | | |
Sbjct 342 CCACACCTGAAGCCTTGACA-TTTA-ACTGGGATTTGGACTCTCCTTTTTCTAATTCAGA 285
Query 1968 -C-AAAAAA-TACACAAGT-GTTTG-GACT-TTGGGAAA--AG-G-CTGAG---CAATAT 2014
| |||||| | |||| | | | | | | || ||| || | ||||| || ||
Sbjct 284 CCAAAAAAAGTTTACAAATAGCTAGTAAGTATT-CAAAAGTAGTGACTGAGTTTAAACAT 226
Query 2015 GAACAATATAAGTGTAGCAAT-ATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCG 2073
| || |||| ||||| || |||||||||||||||||||||||||||||||| || ||
Sbjct 225 G--TAACATAATTGTAG-TATGATTACCATATCTTCTGCTAGTCTAACCATTCCTCTACG 169
Query 2074 ACTACAAGTGTGTGGAATCTGATTGCGCCTT 2104
||| ||||| |||||||| |||| ||||
Sbjct 168 GCTAGTGGTGTGAGGAATCTGTTTGCTCCTT 138
Score = 202 bits (109), Expect = 2e-50
Identities = 198/240 (83%), Gaps = 10/240 (4%)
Strand=Plus/Minus
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATT-TTCACTATATCCA 119
|||||||||||||||||||||||||||||| ||||| |||||| || ||||||||||| |
Sbjct 2085 ATACTCGATTTCATCTGATGGCCTCCAAACCGCTGCGTCATCT-TTCTTCACTATATCAA 2027
Query 120 CCCAAACTCTAGCTGCAT-TAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCG 178
|| | ||||||||||||| | | |||||||||||| || ||||| | ||| |||||
Sbjct 2026 CC-ATACTCTAGCTGCATGT-GAACCCAAGCGAACACATTGGACCTTAACTTCTAGGTCG 1969
Query 179 ATTGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTA 238
| ||||||||||||||||||||| || || |||||| |||||||||||||||| |||||
Sbjct 1968 AGTGAATGCACACGTCCTTCAGCGACAACTTGCTTCCTTCCACTAATATCCATCAACTTG 1909
Query 239 CACTTCTGATTGGCCTTGATAACTTCAGCTAC-ACTTTTACGCTG-CAATG-TTACAATA 295
|| || | ||| | ||||| || | |||| | | |||||||||| || || ||| ||||
Sbjct 1908 CATTTTTTATTTTCTTTGATGACCTAAGCTCCCA-TTTTACGCTGTCA-TGATTATAATA 1851
> AT1G42150.1 | Symbols: | transposable element gene | chr1:15742399-15746446
FORWARD LENGTH=4048
Length=4048
Score = 307 bits (166), Expect = 4e-82
Identities = 257/300 (86%), Gaps = 10/300 (3%)
Strand=Plus/Minus
Query 1 TCAATAGATGACCAACTTATCCATTGGCCATGCAATAGCTGAACCAAGTGAATCTCTCAT 60
|||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 4048 TCAAAAGATGACCAACTTATCCATTGGCCATGCAATAGATGAACCAAGTGCATCTCTCAT 3989
Query 61 ATACTCGATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATT-TTCACTATATCCA 119
||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |
Sbjct 3988 GTACTCGATTTCATCTGATGGCCTCCAAACTGCTGCGTCATC-ATTCTTCACTATATCAA 3930
Query 120 CCCAAACTCTAGCTGCAT-TAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCG 178
|| | ||||||||||||| | | ||||||||||||| ||| ||||| | |||||||||
Sbjct 3929 CC-ATACTCTAGCTGCATCT-GAACCCAAGCGAACATAGTGGACCTTAACTTCTGGGTCG 3872
Query 179 ATTGAATGCACACGTCCTTCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTA 238
| ||||||||||||||||| ||| || || |||||| |||||||||||||||| |||||
Sbjct 3871 AGTGAATGCACACGTCCTTTAGCGACAACTTGCTTCCTTCCACTAATATCCATCAACTTG 3812
Query 239 CACTTCTGATTGGCCTTGATAACTTCAGCTACACTTTT-ACGCTG-CAATG-TTACAATA 295
|| || ||||| | ||| | || ||| || | ||||| |||||| || || ||| ||||
Sbjct 3811 CATTTTTGATTTTCTTTGTTGACCTCAACT-CTCTTTTTACGCTGTCA-TGATTATAATA 3754
> AT5G28524.1 | Symbols: | transposable element gene | chr5:10508115-10508919
REVERSE LENGTH=805
Length=805
Score = 231 bits (125), Expect = 2e-59
Identities = 370/482 (77%), Gaps = 42/482 (9%)
Strand=Plus/Minus
Query 68 ATTTCATCTGATGGCCTCCAAACTGCTGCATCATCTATTTTCACTATATCCACCCAAACT 127
|||||||| |||||||||||||||||||||||||||| ||||||| ||| | |||||||
Sbjct 629 ATTTCATCAGATGGCCTCCAAACTGCTGCATCATCTACATTCACTACATCTATCCAAACT 570
Query 128 CTAGCTGCATTAGCCCCCAAGCGAACATGGTGTACCTTTAGGTCTGGGTCGATTGAATGC 187
||||| | | | | | |||||||||||| | ||||| ||||||||||||
Sbjct 569 CTAGC-G-A--A-C----A--------TGGTGTACCTTTTGATCTGGATCGATTGAATGC 527
Query 188 ACACGTCCT-TCAGCAACCACCTGCTTCTTTCCACTAATATCCATTAACTTACACTTCTG 246
| |||||| | | |||||||| ||||||||||||| |||||||||||||| ||||||||
Sbjct 526 ATTCGTCCTGT-ACCAACCACCCGCTTCTTTCCACTTATATCCATTAACTTGCACTTCTG 468
Query 247 ATTGGCCTT-GATAACTTCAGCTACACTTTTA-CGCTG-CAATGTTACAATATAAACCAG 303
||| ||||| || | |||||| | | |||| ||||| || | ||||| |||||||||
Sbjct 467 ATTAGCCTTCGA-ACCTTCAGATGCT-TTTTGGCGCTGTCA-TATTACATTATAAACCAA 411
Query 304 GTTTAAT-GCATGTAGAAAAATAACCAGATTCAATAGGTAAAAACAATAAACAAAAT-AC 361
|||||| ||||||||||| ||| |||| || | | ||| ||| || |||| | ||
Sbjct 410 GTTTAAACGCATGTAGAAATTTAATTAGATGCAGTTTTTCAAACCAACAATCAAACTTAC 351
Query 362 CGGAGATCTTCT-CAGAGGG-AGTTGTGAATCCAGCAGCTGACTTTTCTTGACAAAAGAC 419
||||||| ||| ||||||| | |||||| | | |||||| ||||||| |||| ||||
Sbjct 350 CGGAGAT-TTCCGCAGAGGGGA-TTGTGA-TGCT--AGCTGAGTTTTCTTCACAAGAGAC 296
Query 420 TTTG-AACCTG-TAGCTG-TGGACTTCTCAGCTAGAGCTTTTGAAACTGTTGCAACGGAT 476
|||| ||| | | |||| | | ||||||| | |||| ||||| || |||||| |||||
Sbjct 295 TTTGGAAC-TACT-GCTGGTAG-CTTCTCACCAAGAGATTTTGCAATTGTTGCTGCGGAT 239
Query 477 TTTGTACCTTTTGTTGTAGATATC-TCAAGGGATGGCTTATAAcctgctgctgcagtttg 535
| || || ||| | || ||||| | | | || | |||||||||| |||||| ||||
Sbjct 238 TCTGAACATTTGGCTGCAGATA-CATGTATAGAAGAATTATAACCTGATGCTGCCTTTTG 180
Query 536 tg 537
||
Sbjct 179 TG 178
> AT5G32825.1 | Symbols: | transposable element gene | chr5:12353841-12360571
REVERSE LENGTH=6731
Length=6731
Score = 172 bits (93), Expect = 2e-41
Identities = 495/680 (73%), Gaps = 64/680 (9%)
Strand=Plus/Minus
Query 2033 AATATTACCA-TATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAGTGTGTGGAAT 2091
||| |||||| | || || |||| |||||||||| | | || || |||||||| |||||
Sbjct 4871 AAT-TTACCAGT-TCCTCAGCTAATCTAACCATTTCTTTACGGCTGCAAGTGTGAGGAAT 4814
Query 2092 CTGATTGCGCCTTCTTTCCTTGTAGCT-ATCGCTTACAACCT-AACAGATGAAT-GTTAA 2148
|||| | || ||||| |||||||| | || || | ||||| || | |||| | |||
Sbjct 4813 CTGACTACGTCTTCTCTCCTTGTA-TTGTTCACTCAAAACCTAAATA-ATGACTAATTAG 4756
Query 2149 T-TTCTAAGGAAAGATATAGATAAATTTACAAAT-TCCA-AATGC--ATACCTTAAATTC 2203
| | | || | ||| ||||| |||| || | | | || || |||||| ||||||
Sbjct 4755 TGTAC-AATCTGA-ATAGAGATATGTTTA-AATTGTTAAGAAAGCAAATACCTGAAATTC 4699
Query 2204 TTTG-CTAGTTTTGAGCTTCACAAATTTACGCCAATCA--AATGGAGAAATATT-TTTAG 2259
| | ||||||||||||||||||||||||||||| ||| ||| ||||||||| ||| |
Sbjct 4698 -TGGACTAGTTTTGAGCTTCACAAATTTACGCCATTCAGCAAT--AGAAATATTCTTT-G 4643
Query 2260 GTCGCATG-TTCATCCTCTCTTG-GTTAGTCTTAGC-TTCT-CTA-ATGTTTGTAACT-T 2313
||| || | |||||||||||| | |||| | ||| || | | | || | | | |
Sbjct 4642 GTCTCA-GCTTCATCCTCTCT-GCGTTATTAGCAGCATTATTC-ACATCACGG-ACCAAT 4587
Query 2314 GCCTTGATTTCCAGGACCTCCACAAGCATCCCATCTGCTTAAGCACTGTAACCTTTTGGT 2373
| ||||||| |||| |||||||| |||||||| | ||| | || | |||| | |
Sbjct 4586 -C-TTGATTTATAGGATCTCCACAAACATCCCATATTCTTGATAACAGCG-CCTTCTCAT 4530
Query 2374 ACTCTTCATCTAGTTCAAACCTTGCCTGCACTCAAAA-ACA-AA-ACAGCTAAGTACTCA 2430
| ||| |||| |||||||||||| ||| || |||||| | | || |||| ||| | | |
Sbjct 4529 ATTCTCCATCAAGTTCAAACCTTACCTACATTCAAAAGA-AGAAGACAG-TAAAT--T-A 4475
Query 2431 CACCAATATATAATA-A-ACT-TGTAAATTTTACACAAATC-TT-ACCTGGACAGATTTC 2485
||||| | |||| | | || | ||||| | | ||| | || ||||| || ||||||
Sbjct 4474 -ACCAA-A-ATAAGAGACACCATACAAATTA-A-AGAAA-CATTCACCTGAACTGATTTC 4421
Query 2486 CAGAGAACTGTCCTGA-CTTCTTCACCTATTTTTGTCCAA-CGATCAATTGTGATTGGAA 2543
|| || || |||||| || ||||||| || || |||| | |||||||| | |||||
Sbjct 4420 CACAGGACAGTCCTGCGCT-CTTCACCAATCTTCCTCCAGTCC-TCAATTGTAACTGGAA 4363
Query 2544 CGTGTTCTCTTACCAATGCGCCTACATATGATGCTAGTTTAACTGAGCCTT-TACCA-AT 2601
| ||||| |||||||| | |||| ||||||| ||| || ||||| ||| | ||| ||
Sbjct 4362 CATGTTCCCTTACCAAAGAACCTATGTATGATGATAGCTTCACTGATCCTGGT-CCACAT 4304
Query 2602 AGGCTCTCCCATGTTAGTGAACTCTACTCTTACTCTGGTATTTGGATCCTTGGCAATATC 2661
|| ||||| | || |||||| || |||| || ||| | ||| ||||||||||| || ||
Sbjct 4303 -GGTTCTCCAAGGTCAGTGAAGTCAACTCGTATTCTAGAATTAGGATCCTTGGCGATGTC 4245
Query 2662 CTTCAGCCTAGTTGGTCCTC 2681
|||| | | ||||||||||
Sbjct 4244 TTTCATCTTTGTTGGTCCTC 4225
> AT2G06902.1 | Symbols: | transposable element gene | chr2:2803448-2804634
FORWARD LENGTH=1187
Length=1187
Score = 139 bits (75), Expect = 2e-31
Identities = 175/221 (79%), Gaps = 16/221 (7%)
Strand=Plus/Minus
Query 2035 TATTACCATATCTTCTGCTAGTCTAACCATTCCCCTGCGACTACAAG-TGTGTGGAATCT 2093
||||||||||||||||||||||||||||||||| |||| ||| | | |||| |||||||
Sbjct 793 TATTACCATATCTTCTGCTAGTCTAACCATTCCTTTGCGGCTA-ATGGTGTGAGGAATCT 735
Query 2094 GATTGCGCCTTCTTTCCTTGTAGCTATCGCTTACAACCTAACAGATGAA-TG-TTAATT- 2150
| |||| |||||| ||||| || ||||| || ||||||||||||| ||| || || ||
Sbjct 734 GTTTGCTCCTTCTATCCTTATAACTATCACTAACAACCTAACAGA-GAAATGCTT--TTA 678
Query 2151 TCTAAGGA-A--AGATATAGA-TAAATTTACA-AATTCCAAATGCAT-ACCTTAAATTCT 2204
| |||| | | | ||||| | |||| ||| || | |||| | || | |||||| |||
Sbjct 677 TGTAAG-ATACTATATATAAAATAAACTTAGTTAAGTACAAAGG-ATTATCTTAAACTCT 620
Query 2205 TTGCTAGTTTTGAGCTTCACAAATTTACGCCAATCAAATGG 2245
||||||||||||| || || | ||| ||||| ||||||||
Sbjct 619 TTGCTAGTTTTGATTTTGACTAGTTTTCGCCACTCAAATGG 579
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 165751579672
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5