BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485276 Length=1429 Score E Sequences producing significant alignments: (Bits) Value AT3G49180.1 | Symbols: RID3 | Transducin/WD40 repeat-like super... 2047 0.0 AT3G49190.1 | Symbols: | O-acyltransferase (WSD1-like) family ... 126 5e-28 > AT3G49180.1 | Symbols: RID3 | Transducin/WD40 repeat-like superfamily protein | chr3:18229749-18232004 FORWARD LENGTH=1508 Length=1508 Score = 2047 bits (1108), Expect = 0.0 Identities = 1335/1442 (93%), Gaps = 26/1442 (2%) Strand=Plus/Plus Query 1 TAGATATCACAAAACCCAGACTTTGGAATCAGTTTCTCtttttttCCCTCTTTCTCTTAG 60 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || Sbjct 1 TAGATATCACAAAACCCAGAC-TTGGAATCAGTTTCTCTTTACTTCCCTCTTTCTCTGAG 59 Query 61 CGATGGAGATTTCTGTTATCGCTTCATCGTCAATCGATGAAGGAATTGGAAGCTGGGATC 120 | ||||||||| |||| |||||||| || ||||||||||||||||||||||| ||||||| Sbjct 60 CTATGGAGATTACTGTAATCGCTTCTTCCTCAATCGATGAAGGAATTGGAAGTTGGGATC 119 Query 121 TCAAAACCGGGA-ATGAGCAGCTTCGTTTCAAGCAGTGTGCTTCTCCGGCGCATGGTCTC 179 |||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 120 TCAAAACCGGGACA-GAGCAGCTTCAATTCAAGCCGTGTGCTTCTCCGGCGCATGGTCTC 178 Query 180 ACCGCCGTCGGCGAGAAATTCCTCGCCTCCTCTCAGCTC-CGTAAAGAATCTACTTCTTC 238 |||||||||||||| ||||| |||||||||||||||||| || |||| | | |||| Sbjct 179 ACCGCCGTCGGCGAAAAATTTCTCGCCTCCTCTCAGCTCTCGGCGAGAA---A-TACTTC 234 Query 239 TGGCTCGATTTTTTACTGGTCTTGGACTAAGCCTCAAGTTGAAGTGAGGAGCTTTCCAGT 298 |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct 235 TGGCTCGATTTTTTACTGGTCTTGGACTAAGCCTCAAGCTGAAGTGAAGAGCTACCCAGT 294 Query 299 GGAACCAATAAAGGCTCTTGCAGCAAACAATGAAGGAACTTACTTAGTTGGTGGTGG-AT 357 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 295 GGAACCAATAAAGGCTCTTGCAGCAAACAATGAAGGAACTTACTTAGTTGGTGGTGGAAT 354 Query 358 CCTCCGGAGATATTTACCTTTGGGAGGTTGCGACTGGGAAGTTGCTTAAGAAGTGGCATG 417 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 -CTCTGGAGATATTTACCTTTGGGAGGTTGCGACTGGGAAGTTGCTTAAGAAGTGGCATG 413 Query 418 GTCATTATCGTTCAGTGACATGTTTGGTGTTCTCTGGAGATGATTCTTTGTTGGTTTCAG 477 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 414 GTCATTATCGTTCAGTAACATGTTTGGTGTTCTCTGGAGATGATTCTTTGTTGGTTTCTG 473 Query 478 GATCTCAAGATGGATCTGTTAGAGTTTGGTCTCTTATAAGGCTATTTGATGATTTCCAGA 537 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 474 GATCTCAAGATGGGTCTATTAGAGTTTGGTCTCTTATAAGGCTATTTGATGATTTCCAGA 533 Query 538 GGCAGCAAGGGAAAACTCTTTATGAACATAATTTTAATGAGCATACAATGTCTGTGACAG 597 ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || | Sbjct 534 GGCAGCAAGGGAACACTCTTTATGAACACAATTTTAATGAGCATACAATGTCTGTAACTG 593 Query 598 ACATTGTTATTGATTATGGAGGCTGCAATGCTATGATAATTTC-TGCTTCGGAAGATCGG 656 | |||||||| || |||||||||||||||||| |||||||||| | |||| ||||||||| Sbjct 594 ATATTGTTATAGACTATGGAGGCTGCAATGCTGTGATAATTTCCT-CTTCAGAAGATCGG 652 Query 657 ACTTGCAAGGTTTGGAGCTTGTCAAGAGGGAAATTGTTGAAAAATATCATTTTTCCTTCA 716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653 ACTTGCAAGGTTTGGAGCTTGTCAAGAGGGAAATTGTTGAAAAATATCATTTTTCCTTCA 712 Query 717 GCCATCAATGCACTCGCGTTGGACCCTGGCGGGTATGTGTTCTATGCTGGTGGTAGAGAT 776 | ||||||||||||||| ||||||||||| |||| ||||||||||||||||| ||||| Sbjct 713 GTCATCAATGCACTCGCATTGGACCCTGGAGGGTGTGTGTTCTATGCTGGTGCCAGAGAC 772 Query 777 GGCAAAATTTATATCGGTGCCATTAATGCCACGAGTGAATATGGGACACAAGTTCTAGGT 836 ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct 773 AGCAAAATCTATATCGGTGCCATTAATGCCACAAGTGAATACGGGACACAAGTTCTTGGT 832 Query 837 TCAGTATCCGAACAAAG-CAAAGCTGTTACTTGCTTAGCATATTGCACAGAGGGAAACCT 895 |||||||| ||| |||| ||||||| ||||||||||||||||||| |||| |||||||| Sbjct 833 TCAGTATCTGAA-AAAGGCAAAGCTATTACTTGCTTAGCATATTGTGCAGACGGAAACCT 891 Query 896 TTTAATTTCTGGATCAGAAGAAGGTGTGGTTTGTGTTTGGGATCCCAAATCACGTCGCCC 955 ||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 892 TTTGATATCTGGATCAGAAGATGGTGTGGTTTGTGTTTGGGATCCCAAATCACTTCGCCA 951 Query 956 TGTTCGTACTCTCGGCCGTGGAAAAGG----A-AAA-GGTCCTCCTGTGAACAATATTCA 1009 ||||||||||||| || || |||||| | ||| |||||| |||||||||||||| Sbjct 952 TGTTCGTACTCTCATCCATGCAAAAGGTTCTAGAAAAGGTCCT---GTGAACAATATTCA 1008 Query 1010 AATTGTTAGAAAAACGATTGTTGATAATTCCAACAAAACACAA-TCTTCCTGGAAAAGAC 1068 ||||||||||||||||||||||| ||||||||||||||| ||| | |||||||||||| | Sbjct 1009 AATTGTTAGAAAAACGATTGTTGCTAATTCCAACAAAACCCAAGT-TTCCTGGAAAAGTC 1067 Query 1069 GTGGGTCTTTGATGCCACCGCCTTTGGAAAAATATGAAAGATCAGGAGAAGATACTATGG 1128 ||||| |||| || ||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct 1068 GTGGGGCTTTAATCCCACCGCCTTTGGAAAAATATGAAAGACCAGTAGAAGATACTATGG 1127 Query 1129 ATGGTATCGTTACCGTTGATCCACCCCCATTTTCTGATGTTCCTGTTTACTCTTCTTTCC 1188 ||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1128 ATGGTATCGTTACGGTTGATCCGCCGCCATTTTCTGATGTTCCTGTTTACTCTTCTTTCC 1187 Query 1189 TCAGCGCTGACCTTATTGACGAGCAAGTTAGAGAACTTCAGCAACAAGGCTCTGCAGCAA 1248 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1188 TCAGTGCTGACCTTATTGACGAGCAAGTTAAAGAACTTCAGCAACAAGGCTCTGCAGCAA 1247 Query 1249 CAGAGATCGAAATGGAAAGACTGAAACTTGAATACAAAAGATCTTTACAGATGAATGATC 1308 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1248 CAGAGATGGAAATGGAAAGACTGAAACTTGAATACAAAAGATCTTTACAGATGAATGAAC 1307 Query 1309 AATGGCAGAAGAACTATGAGAATTTGCTTCAGGTGGTTATGGAAGAAGAACAAATCGGTG 1368 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1308 AATGGCAGAAGAACTATGAGAATTTGCTTCAAGTGGTTATGGAAGAAGAACAAATCGGTG 1367 Query 1369 GTTCCAATTGAAAGCTTTT-ATTGTTGTTTCTACACATTTTTGGAATTATATTGAGAGAT 1427 || |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| Sbjct 1368 GTACCAATTGAAAGCTTTTTATTGTTGTTTCTACACATTTTTGGAATTACATTAAGAGAT 1427 Query 1428 AT 1429 || Sbjct 1428 AT 1429 > AT3G49190.1 | Symbols: | O-acyltransferase (WSD1-like) family protein | chr3:18231845-18234391 REVERSE LENGTH=1727 Length=1727 Score = 126 bits (68), Expect = 5e-28 Identities = 77/81 (95%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 1350 GAAGAAGAACAAATCGGTGGTTCCAATTGAAAGC-TTTTATTGTTGTTTCTACACATTTT 1408 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct 1727 GAAGAAGAACAAATCGGTGGTACCAATTGAAAGCTTTTTATTGTTGTTTCTACACATTTT 1668 Query 1409 TGGAATTATATTGAGAGATAT 1429 |||||||| ||| |||||||| Sbjct 1667 TGGAATTACATTAAGAGATAT 1647 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70431364635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5