BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg485280 Length=1961 Score E Sequences producing significant alignments: (Bits) Value AT3G49220.1 | Symbols: | Plant invertase/pectin methylesterase... 3110 0.0 > AT3G49220.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:18249776-18253839 FORWARD LENGTH=2053 Length=2053 Score = 3110 bits (1684), Expect = 0.0 Identities = 1872/1964 (95%), Gaps = 7/1964 (0%) Strand=Plus/Plus Query 1 AATGTAAATCAAAAGAGAACTAAACCAAGAAACAAAAATGGGATACGAAAGGCTCGGACC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 29 AATGTAAATCAAAAGAGAACTAAACCAAGAAAC-AAAATGGGATACGAAAGGCTCGGACC 87 Query 61 ATCTGGAGCAACTGGTTCGGTC-CCAATCTCCACTACTACAGCTCCGATCCTAAACCAAG 119 ||| |||||||||||||||||| || | |||||||||||||||||| ||||| ||||||| Sbjct 88 ATCCGGAGCAACTGGTTCGGTCACC-ACCTCCACTACTACAGCTCCAATCCTTAACCAAG 146 Query 120 TCTCCACGTCATCA-CAACCGGAGAACAACAACCGGAGAAGCAAAAAGAAGCTTGTAGTG 178 ||||||||||| | |||||||||||||||||||| |||||||||||||||||||| || Sbjct 147 TCTCCACGTCA-GAGCAACCGGAGAACAACAACCGAAGAAGCAAAAAGAAGCTTGTCGTA 205 Query 179 TCATCAATCGTCTTAGCCATCTCACTTATCCTCGCCGCCGCGATCTTCGCCGGAGTCAGA 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 206 TCATCAATCGTCTTAGCCATCTCACTTATCCTCGCCGCCGCGATCTTCGCCGGAGTCAGA 265 Query 239 TCACGTCTCAAGTTAAACCAATCTGTTCCAGGCCTAGCTCGTAAACCAAGCCAAGCAATC 298 ||||||||||||||||||||||| || |||||||||||||||||||| || ||||||||| Sbjct 266 TCACGTCTCAAGTTAAACCAATCAGTCCCAGGCCTAGCTCGTAAACCGAGTCAAGCAATC 325 Query 299 TCTAAAGCTTGTGGGTTAACTCGTTTCCCCGAGTTATGCGTTGACTCACTCATGGACTTT 358 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 326 TCTAAAGCTTGTGAGTTAACTCGTTTCCCCGAGTTATGCGTTGACTCACTCATGGACTTT 385 Query 359 CCCGGCTCACTCGCCGCTTCCTCCTCCAAAGATCTGATCCACGTGACGGTTAACATGACG 418 |||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||| Sbjct 386 CCCGGCTCACTCGCCGCTTCCTCCTCTAAAGATCTCATCCACGTGACTGTGAACATGACG 445 Query 419 CTCCACCACTTCAGTCGCGCTCTCTACTCCTCTGCTTCCCTCTCCTTCGTCGACATGCCG 478 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 CTCCACCACTTCAGCCACGCTCTCTACTCCTCTGCTTCCCTCTCCTTCGTCGACATGCCG 505 Query 479 CCACGTGCTCGCTCAGCTTACGACTCTTGCGTCGAGCTACTAGATGATTCCGTCGACGCG 538 ||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||| Sbjct 506 CCACGTGCTCGCTCAGCTTACGACTCTTGCGTCGAGCTACTTGACGATTCCGTTGACGCG 565 Query 539 CTCTCACGCGCTCTCTCCTCCGTCGTATCGTCCTCGGCCAAGCCACAAGACGTTACCACG 598 || ||||||||||| |||||||||||||| ||||| || ||||| ||||| ||||| ||| Sbjct 566 CTATCACGCGCTCTTTCCTCCGTCGTATCCTCCTCCGCTAAGCCGCAAGATGTTACAACG 625 Query 599 TGGCTTAGCGCGGCTTTAACGAACCATGACACGTGCACTGAAGGATTCGACGGCGTCGAC 658 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 626 TGGCTTAGCGCGGCTTTAACAAACCATGACACGTGTACTGAAGGATTCGACGGCGTCGAC 685 Query 659 GACGGTGGAGTGAAGGATCATATGACAGCGGCGATAAAGAATCTTTCTGAGCTTGTTAGT 718 |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||| Sbjct 686 GACGGTGGAGTGAAGGATCATATGACGGCGGCGTTACAGAATCTTTCTGAGCTTGTTAGT 745 Query 719 AACTGTCTTGCTATATTCTCGGCGAGCCACGACGGTGACGATTTCGCCGGAGTTCCGATA 778 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 746 AACTGTCTTGCTATATTCTCGGCGAGTCACGACGGTGACGATTTCGCCGGAGTTCCAATA 805 Query 779 CAGAACAGGAGACTGTTGGGAGTGGAGGAACGAGAAGAGAAATTCCCGAGATGGATGAGG 838 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 CAGAACAGGAGGCTGCTGGGAGTGGAGGAACGAGAAGAGAAATTCCCGAGATGGATGAGA 865 Query 839 CCAAGAGAACGCGAGATATTGGAAATGCCGGTATCTCAGATACAAGCTGATATTATCGTC 898 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 866 CCAAAAGAACGCGAGATACTGGAAATGCCGGTATCTCAGATACAAGCTGATATTATCGTA 925 Query 899 TCGAAAGACGGCAACGGCACGTGCAAAACTATATCGGAAGCTATCAAGAAAGCTCCTCAG 958 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 TCGAAAGACGGTAACGGCACGTGCAAAACTATATCGGAAGCTATCAAGAAAGCTCCTCAG 985 Query 959 AACAGTACTCGCCGGATAATTATCTATGTCAAGGCCGGAAGGTATGAAGAGAACAACCTC 1018 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 986 AACAGTACTCGCCGGATAATTATCTACGTCAAGGCCGGAAGATATGAAGAGAACAACCTC 1045 Query 1019 AAGGTCGGTAGGaaaaaaaTAAATTTGATGTTCGTTGGAGATGGGAAGGGTAAAACTGTC 1078 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1046 AAGGTCGGTAGGAAAAAAATTAATTTGATGTTCGTTGGAGATGGCAAGGGTAAAACTGTT 1105 Query 1079 ATTTCGGGAGGGAAAAGTATATTTGACAACATCACTACTTTCCACACGGCGTCATTTGCT 1138 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1106 ATTTCGGGAGGCAAAAGTATATTTGACAACATCACTACTTTCCACACGGCGTCATTTGCT 1165 Query 1139 GCGACCGGAGCTGGATTTATTGCAAGGGACATCACATTCGAAAATTGGGCTGGTCCAGCG 1198 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1166 GCGACCGGAGCTGGATTTATTGCAAGGGACATCACATTCGAAAACTGGGCCGGTCCAGCG 1225 Query 1199 AAGCACCAAGCGGTGGCTCTCCGTATTGGGGCTGACCACGCAGTGATCTACCGATGCAAT 1258 ||||||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct 1226 AAGCACCAAGCCGTGGCTCTCCGCATCGGAGCTGACCACGCAGTGATCTACCGATGCAAT 1285 Query 1259 ATAATCGGTTACCAAGACACACTTTACGTTCATTCAAACCGTCAATTCTTTCGTGAATGC 1318 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct 1286 ATAATCGGTTACCAAGACACACTCTACGTCCATTCAAACCGCCAATTCTTTCGTGAATGC 1345 Query 1319 GATATCTACGGTACAGTCGATTTTATCTTTGGTAATGCAGCCGTCGTACTACAAAACTGT 1378 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1346 GATATCTACGGTACAGTCGATTTTATCTTTGGTAACGCAGCCGTCGTACTACAAAACTGT 1405 Query 1379 AGCATCTACGCACGAAAGCCCATGGATTTTCAGAAAAATACAATCACGGCTCAAAACAGA 1438 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1406 AGCATCTACGCACGGAAGCCAATGGATTTTCAGAAAAATACAATCACGGCTCAAAACAGA 1465 Query 1439 AAAGATCCGAACCAAAACACCGGAATATCGATACATGCGTCTAGGGTTCTTGCAGCATCC 1498 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1466 AAAGATCCGAACCAAAACACCGGAATATCAATACATGCGTCTAGGGTTCTTGCAGCATCC 1525 Query 1499 GATCTCCAAGCGACAAACGGTAGTACCCAGACGTATCTAGGCCGACCTTGGAAGCTATTC 1558 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1526 GATCTCCAAGCGACAAACGGTAGTACACAGACGTATCTAGGCCGACCTTGGAAGCTATTC 1585 Query 1559 TCTAGGACGGTGTATATGATGTCGTATATCGGTGGTCATGTACACACGAGAGGTTGGCTC 1618 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1586 TCTAGGACAGTGTATATGATGTCGTATATCGGTGGTCATGTACACACGAGAGGTTGGCTC 1645 Query 1619 GAGTGGAACACAACATTTGCTTTAGATACGTTATATTACGGAGAGTATTTGAACAGTGGA 1678 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct 1646 GAGTGGAACACAACATTTGCTTTAGATACTTTGTATTATGGAGAGTATTTGAACAGTGGA 1705 Query 1679 CCGGGGTCAGGTCTCGGGCAACGTGTGACCTGGCCGGGGTATCGGGTCATCAATTCGACG 1738 || ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 1706 CCTGGGTCGGGTCTCGGGCAACGTGTGAGCTGGCCGGGTTATCGGGTCATCAATTCGACG 1765 Query 1739 GCCGAGGCTAACCGGTTCACGGTGGCTGAATTTATATACGGTTCGTCGTGGTTGCCTTCG 1798 |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| Sbjct 1766 GCCGAGGCAAACCGGTTCACTGTGGCAGAATTTATATACGGTTCCTCGTGGTTGCCATCG 1825 Query 1799 ACCGGAGTTTCGTTCTTGGCCGGATTAAGCATATAGGTAGAGGGAAAAAT-GAAATGCTT 1857 |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 1826 ACCGGAGTTTCGTTCTTGGCCGGATTAAGCATATAGGTAGAGA-AAAAATTGAAATGCTT 1884 Query 1858 ATGTTTCCGATGAATTGTTTCATTCTTACGGTCCTTATAATAATGGACATATCATTAATC 1917 || |||||||||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct 1885 ATTTTTCCGATGAATTGTTTCATTCTTACGGTCCTTATATTAATGGACATATCAGTATTC 1944 Query 1918 CTATATATATGAGTATATTTTAACTTTTAATTGTACTATCTCCA 1961 | ||||||||||||||||||||||||||||||||| | |||||| Sbjct 1945 CAATATATATGAGTATATTTTAACTTTTAATTGTAATGTCTCCA 1988 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97138054575 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5