BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485296
Length=1962
Score E
Sequences producing significant alignments: (Bits) Value
AT3G49370.1 | Symbols: | Calcium-dependent protein kinase (CDP... 2970 0.0
AT5G24430.1 | Symbols: | Calcium-dependent protein kinase (CDP... 1724 0.0
AT2G46700.1 | Symbols: ATCRK3, CRK3 | CDPK-related kinase 3 | c... 252 1e-65
> AT3G49370.1 | Symbols: | Calcium-dependent protein kinase (CDPK)
family protein | chr3:18304742-18307906 REVERSE LENGTH=1997
Length=1997
Score = 2970 bits (1608), Expect = 0.0
Identities = 1821/1924 (95%), Gaps = 13/1924 (1%)
Strand=Plus/Plus
Query 1 ATGGGTCATTGTTACAGCCGGAACATTTCCACCGTCGACGATGACGACGATATCCCCTCC 60
||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1 ATGGGCCACTGTTACAGCCGGAACATTTCCACCGTCGACGACGACGACGAAATCCCCTCC 60
Query 61 GGAATCGCTCAGTTACCACATCGGTCTGATCAAAACCACCACCAGA----GT--TCATCA 114
| || ||||||||||||||||||||| | |||||||||||||||| | ||||||
Sbjct 61 GCAACCGCTCAGTTACCACATCGGTCACACCAAAACCACCACCAGACTTCATCATCATCA 120
Query 115 TCAATTCCTCAGTCTCCGGCTACTTCAGAAGTCAACCCTTAC-ACAATCAGCCCATTTCA 173
|||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 121 TCAATTCCCCAGTCTCCGGCTACTTCAGAAGTCAACCCTTACAAC-ATCAGCCCATTTCA 179
Query 174 AAGCCCGTTACCGGCGGGAGTAGCTCCATCTCCGGCGAGAACTCCGGGAAGAAAATTCAA 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 AAGCCCGTTACCGGCGGGAGTAGCTCCATCTCCGGCGAGAACTCCGGGAAGAAAATTCAA 239
Query 234 ATGGCCATTCCCGCCTCCTTCACCTGCGAAACCGATTATGGCGGCTCTGAGACGACGACG 293
|||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||
Sbjct 240 ATGGCCATTCCCGCCTCCTTCACCTGCGAAACCGATTATGGCGGCTTTAAGACGGCGACG 299
Query 294 AGGTACTGCACCACATCCTCGAGATGGTCCGATCCCTGAGGATAGTGAAGACGGCGGAAG 353
|||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 300 AGGTACAGCACCACATCCTCGGGATGGTCCGATCCCTGAGGATAGTGAAGCCGGCGGAAG 359
Query 354 CGGAGGCGGAATCGGAGAGAGATTAGATAAGAATTTCGGATTTGCGAAGAATTTTGAAGG 413
||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct 360 CGGCGGCGGAATCGGAGAAAGGTTAGATAAAAATTTCGGATTTGCGAAGAATTTTGAAGG 419
Query 414 TAAGTATGAGCTTGGGAGAGAGGTAGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAA 473
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 420 TAAGTATGAGCTTGGGAGAGAAGTAGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAA 479
Query 474 AGCTAAGAAAGGGAAGATCAAAGGTCAAACTGTTGCAGTCAAAATCATCTCTAAATCTAA 533
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 480 AGCTAAGAAAGGGAAGATCAAAGGTCAAACAGTTGCAGTCAAAATCATCTCTAAATCTAA 539
Query 534 GATGACATCGGCTTTGTCGATTGAAGATGTTCGTCGAGAGGTGAAATTGTTGAAAGCTTT 593
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 540 GATGACATCAGCTTTGTCGATTGAAGATGTTCGTCGAGAGGTGAAGTTGTTGAAAGCTTT 599
Query 594 GTCTGGGCATAGTCATATGGTTAAGTTCTACGATGTGTTCGAGGATTCGGATAATGTCTT 653
||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 600 GTCTGGGCATAGTCACATGGTTAAGTTCTATGATGTGTTTGAGGATTCGGATAATGTCTT 659
Query 654 TGTTGTTATGGAGTTATGTGAAGGTGGAGAGCTATTGGACAGTATTTTGGCGAGAGGTGG 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TGTTGTTATGGAGTTATGTGAAGGTGGAGAGCTATTGGACAGTATTTTGGCGAGAGGTGG 719
Query 714 TCGATACCCGGAAGCAGATGCTAAGCGTATACTTGTACAGATTTTATCTGCAACGGCTTT 773
|||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 720 TCGATATCCGGAAGCAGAAGCTAAGCGTATTCTTGTACAGATTTTATCTGCAACTGCTTT 779
Query 774 TTTCCATCTTCAAGGTGTTGTGCACCGTGATCTGAAACCGGAGAATTTTCTCTTTACCAG 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 780 TTTCCATCTTCAAGGTGTTGTGCACCGTGATCTGAAACCGGAGAATTTTCTCTTTACAAG 839
Query 834 CAAAAATGAGGATGCAATACTCAAGGTCATAGATTTTGGCTTGTCTGATTACGCTAGATT 893
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 840 CAAAAATGAGGATGCAGTACTCAAGGTTATAGATTTTGGCTTGTCTGATTACGCTAGATT 899
Query 894 CGATCAGCGTCTCAACGATGTGGTAGGAAGTGCATACTATGTTGCACCTGAAGTACTTCA 953
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TGATCAGCGTCTCAACGATGTGGTAGGAAGTGCATACTATGTTGCACCTGAAGTACTTCA 959
Query 954 CAGATCATATAGCACTGAAGCAGATATATGGAGCATTGGTGTCATATCTTACATATTACT 1013
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 CAGATCCTATAGCACCGAAGCAGATATATGGAGCATTGGTGTCATATCTTACATATTACT 1019
Query 1014 CTGTGGAAGTAGACCTTTTTACGGACGAACCGAGTCTGCAATTTTTCGTTGTGTTCTTAG 1073
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1020 CTGTGGAAGTAGACCTTTTTACGGAAGAACCGAGTCTGCAATTTTTCGTTGTGTGCTTAG 1079
Query 1074 AGCGAATCCTAATTTCGAAGATTTACCGTGGCCTTCCATATCTCCTATTGCCAAAGACTT 1133
|||||| || |||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1080 AGCGAACCCGAATTTCGACGATTTGCCGTGGCCTTCAATATCTCCTATTGCCAAAGACTT 1139
Query 1134 TGTGAAAAGGCTTTTGAACAAAGACCATAGGAAAAGAATGACAGCTGCTCAAGCTTTAGC 1193
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TGTGAAAAGGCTTTTGAATAAAGACCATAGGAAAAGAATGACAGCTGCTCAAGCTTTAGC 1199
Query 1194 TCATCCATGGCTTCGAGACGAAAATCCTGGTTTGCTTCTGGATTTCTCTATCTACAAATT 1253
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct 1200 TCATCCATGGCTTCGAGATGAAAATCCTGGTTTACTTCTGGATTTCTCTATCTACAAATT 1259
Query 1254 GGTGAAATCTTATATTCGTGCAA-GCCCTTTCCGACGAGCAGCACTTAAGTCGCTATCGA 1312
|||||| ||||||||||||||| ||| ||||||| |||||||||||||||| ||||| |
Sbjct 1260 GGTGAAGTCTTATATTCGTGCATCGCC-TTTCCGAAGAGCAGCACTTAAGTCTCTATCCA 1318
Query 1313 AAGCTATGCCCGAAGAAGAACTCGTATTCCTTAAAGCACAGTTTATGCTTTTGGAGCCAG 1372
||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 1319 AAGCTATACCCGAAGAGGAACTCGTGTTCCTTAAAGCACAGTTTATGCTCTTGGAGCCAG 1378
Query 1373 AAGATGGAGGCTTGCATCTTCACAATTTCACCACGGTTCTGACAAGATATGCTACAGATG 1432
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1379 AAGATGGAGGCTTGCATCTTCACAATTTCACCACGGCTCTGACAAGATATGCTACGGATG 1438
Query 1433 CTATGATCGAATCTAGGCTTCCTGACATTTTAAACATGATGCAACCATTGGCACATAAAA 1492
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1439 CTATGATCGAATCTAGACTTCCTGACATATTAAACATGATGCAACCATTGGCACATAAGA 1498
Query 1493 AACTAGATTTTGAAGAGTTTTGTGCGGCTGCGGTCAGTGTTTATCAACTTGAGGCTCTTG 1552
|||| |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||
Sbjct 1499 AACTTGATTTTGAAGAGTTTTGTGCGGCTTCAGTCAGCGTTTATCAACTTGAGGCTCTTG 1558
Query 1553 AAGAATGGGAACAGATCGCAACTATAGCATTTGACCACTTTGAACGTGAAGGAAGCCGAG 1612
|||||||||||||||||||||| |||| ||||| ||||||||| |||||||||||||||
Sbjct 1559 AAGAATGGGAACAGATCGCAACGGTAGCCTTTGAACACTTTGAAAGTGAAGGAAGCCGAG 1618
Query 1613 CCATTTCCGTCCAAGAACTCGCTGAAGAGATGGGTTTGGGACCAAATGCTTATCCTCTGC 1672
||||||| |||||||||||||| || |||||| |||||||||||||||| ||||||||||
Sbjct 1619 CCATTTCGGTCCAAGAACTCGCCGAGGAGATGAGTTTGGGACCAAATGCGTATCCTCTGC 1678
Query 1673 TCAAGGATTGGATCCGAAGTTTAGATGGGAAGCTGAATTTCTTAGGCTACGCCAAGTTCT 1732
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1679 TCAAGGATTGGATCCGTAGTTTAGATGGGAAGCTGAATTTCTTAGGTTACGCCAAGTTCT 1738
Query 1733 TGCACGGTGTGACTGTACGAAGCTCGAGCTCGAGACCGACGAGATGACTTCTAACTTCGC 1792
|||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||| ||
Sbjct 1739 TGCACGGTGTGACTGTTCGAAGCTCGAGCTCGAGACCAATGAGATGACTCCTAACTTTGC 1798
Query 1793 AAATCAAAGACCCTAATCATTAAAACATGGATCTCATTATTATACTGTCGATTCAAGACA 1852
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1799 AAATCAAA--CCCTAATCATTAAAACATGAATCTCATTATTATACTGTCGATTCAAGACA 1856
Query 1853 AAAACATCAACCGGAAAAAA-GGTACCTCTATTTGTATTAAGCATTTTGTTTTTAGAGGG 1911
|||||||| || | |||||| ||||||||| |||||||||||||||||||||| |||||
Sbjct 1857 AAAACATCGACTGAAAAAAAAGGTACCTCTTTTTGTATTAAGCATTTTGTTTTCAGAGGA 1916
Query 1912 ACCA 1915
||||
Sbjct 1917 ACCA 1920
Score = 76.8 bits (41), Expect = 7e-13
Identities = 45/47 (96%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 1916 ttttttttttGTATTTAAATTCCGGTTTGTATAGAAAGAATTAGATG 1962
||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1951 TTTTTTTATTGTATTGAAATTCCGGTTTGTATAGAAAGAATTAGATG 1997
> AT5G24430.1 | Symbols: | Calcium-dependent protein kinase (CDPK)
family protein | chr5:8339144-8343102 REVERSE LENGTH=2220
Length=2220
Score = 1724 bits (933), Expect = 0.0
Identities = 1529/1809 (85%), Gaps = 71/1809 (4%)
Strand=Plus/Plus
Query 1 ATGGGTCATTGTTACAGCCGGAACATTTCCACCGTCGACGATGACGACGATATCCCCTCC 60
|||||||||||||||||||||||||| ||| ||||||| | |||||||| |||||| ||
Sbjct 190 ATGGGTCATTGTTACAGCCGGAACATCTCCGCCGTCGA-G--GACGACGAGATCCCCACC 246
Query 61 GG-AATC-GCTCA-GTTACCACATCGGTC-TGATCAAAACCACCACCAGAG-TTC-A-TC 113
|| || | || | ||| | | ||| | | |||||| |||| || | ||| | ||
Sbjct 247 GGTAA-CGGC-GAGGTTTCGA-ATCAACCAT-CTCAAAATCACCGGCA-TGCTTCGATTC 301
Query 114 ATCAATTCCT-CAG-T-C-TCCGGCTACTTCAGAAGTCAAC-CCT-TACACAATCAGCCC 167
|| | | || | | | | || || |||| | ||||||||| | | || || || |||||
Sbjct 302 CTC-AGT-CTCCGGTTGCTTCTGG-TACTCCTGAAGTCAACTCATATA-AC-ATTAGCCC 356
Query 168 ATTT-CAAAGCCCGTTACCGGCGGGAGTAGCTCCATCTCCGGCGAGAACTCCGGGAAGAA 226
||| |||||||||||||||||||||||||||||||| |||||||||||||||||| | |
Sbjct 357 -TTTCCAAAGCCCGTTACCGGCGGGAGTAGCTCCATCACCGGCGAGAACTCCGGGACGGA 415
Query 227 AATTCAAATGGCCATTCCCGCCTCCTTCACCTGCGAAACCGATTATGGCGGCTCTGAGAC 286
| ||||||||||| || || || || ||||||||||||||||||||||||||| ||||||
Sbjct 416 AGTTCAAATGGCCGTTTCCTCCACCGTCACCTGCGAAACCGATTATGGCGGCTTTGAGAC 475
Query 287 GACGACGAGGTACTGCACCACATCCTCGAGATG-GTCCGATCCCTGAGGATAGTGAAGAC 345
||||||| || || | || || |||||||||| | |||||||| ||||||||||||||
Sbjct 476 GACGACGTGGCGCTCCGCCTCAGCCTCGAGATGAG-CCGATCCCGGAGGATAGTGAAGAT 534
Query 346 G--GCGGA--AGCGG-AG-G-C---GGAATCGGAGAGAGATTAGATAAGAATTTCGGATT 395
| | || | ||| | | | || ||||||||| ||||||||||||||||| ||
Sbjct 535 GTAGTAGATCA-CGGTGGTGACAGTGGCGGCGGAGAGAGGTTAGATAAGAATTTCGGGTT 593
Query 396 TGCGAAGAATTTTGAAGGTAAGTATGAGCTT-GGGAGAGAGGTAGGTCGAGGGCATTTTG 454
|| |||||| || ||||| ||||||||| || |||| ||| ||||| |||||||||||||
Sbjct 594 TGGGAAGAACTTCGAAGGGAAGTATGAG-TTAGGGAAAGAAGTAGGGCGAGGGCATTTTG 652
Query 455 GTCATACTTGTTGGGCTAAAGCTAAGAAAGGGAAGATCAAAG-GTCAAACTGTTGCAGTC 513
|||||||||||||||| ||||| |||||||| ||||| ||| ||||| || || |||
Sbjct 653 GTCATACTTGTTGGGCAAAAGCGAAGAAAGGCAAGAT-GAAGAACCAAACCGTGGCTGTC 711
Query 514 AAAATCATCTCTAAATCTAAGATGACATCGGCTTTGTCGATTGAAGATGTTCGTCGAGAG 573
||||||||||||||| |||||||||| ||| | || || ||||||||||||||| ||||
Sbjct 712 AAAATCATCTCTAAAGCTAAGATGACGTCGACGTTATCTATTGAAGATGTTCGTAGAGAA 771
Query 574 GTGAAATTGTTGAAAGCTTTGTCTGGGCATAGTCATATGGTTAAGTTCTACGATGTGT-T 632
||||||||| |||||||||| || |||||||| ||||||||||||||||| ||||| | |
Sbjct 772 GTGAAATTGCTGAAAGCTTTATCAGGGCATAGGCATATGGTTAAGTTCTATGATGTATAT 831
Query 633 CGAGGATTCGGATAATGTCTTTGTTGTTATGGAGTTATGTGAAGGTGGAGAGCTATTGGA 692
|||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 832 -GAGGATGCTGATAATGTCTTTGTTGTTATGGAGTTATGCGAAGGTGGAGAGCTATTGGA 890
Query 693 CAGTATTTTGGCGAGAGGTGGTCGATACCCGGAAG-CAGATGCTAAGCGTATACTTGTAC 751
|| ||||||||||||||||| |||||||| |||| | ||||| || ||||| ||||| |
Sbjct 891 TAGAATTTTGGCGAGAGGTGGACGATACCCTGAAGTC-GATGCCAAACGTATTCTTGTGC 949
Query 752 AGATTTTATCTGCAACGGC-TTTTTTCCATCTTCAAGGTGTTGTGCACCGTGATCTGAAA 810
||||||| |||||||| || |||||| || ||||||||||| |||||||||||||||||
Sbjct 950 AGATTTTGTCTGCAACAGCATTTTTT-CACCTTCAAGGTGTCGTGCACCGTGATCTGAAG 1008
Query 811 CCGGAGAATTTTCTCTTTACCAGCAAAAATGAGGATGCAATACTCAAGGTCATAGATTTT 870
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 1009 CCGGAGAATTTTCTCTTTACCAGCAGAAATGAGGATGCGATACTCAAGGTCATAGATTTT 1068
Query 871 GGCTTGTCTGATTACGCTAGATTCGATCAGCGTCTCAACGATGTGGTAGGAAGTGCATAC 930
||||||||||||| | ||||| ||||||||||||||| ||||| |||||||||||||||
Sbjct 1069 GGCTTGTCTGATTTCATTAGATACGATCAGCGTCTCAATGATGTTGTAGGAAGTGCATAC 1128
Query 931 TATGTTGCACCTGAAGTACTTCACAGATCATATAGCACTGAAGCAGATATATGGAGCATT 990
|||||||||||||||||||| || || || || ||||||||||||||||| ||||||||
Sbjct 1129 TATGTTGCACCTGAAGTACTCCATAGGTCTTACAGCACTGAAGCAGATATGTGGAGCATC 1188
Query 991 GGTGTCATATCTTACATA-TTACTCTGTGGAAGTAGACCTTTTTACGGACGAACCGAGTC 1049
||||||||| ||||||| || ||||||||||| |||||||| || ||| |||| |||||
Sbjct 1189 GGTGTCATAAGTTACATACTT-CTCTGTGGAAGCAGACCTTTCTATGGAAGAACTGAGTC 1247
Query 1050 TGCAATTTTTCGTTGTGTTCTTAGAGCGAATCCTAATTTCGAAGATTTACCGTGGCCTTC 1109
|||||| || |||||||| |||||||| || |||||||| || ||| | || ||||||||
Sbjct 1248 TGCAATATTCCGTTGTGTGCTTAGAGCAAACCCTAATTTTGAGGATATGCCTTGGCCTTC 1307
Query 1110 CATATCTCCTATTGCCAAAGACTTTGTGAAAAGGCTTTTGAACAAAGACCATAGGAAAAG 1169
|||||||||| |||||||||||| |||||||||||||||||||| |||||||||||| |
Sbjct 1308 TATATCTCCTACTGCCAAAGACTTCGTGAAAAGGCTTTTGAACAAGGACCATAGGAAACG 1367
Query 1170 AATGACAGCTGCTCAAGCTTTAGCTCATCCATGGCTT-CGAGACGAAAATCCTGGTTTGC 1228
||||||||||||||||||| |||||||||| ||| || || |||||||| || |||||||
Sbjct 1368 AATGACAGCTGCTCAAGCTCTAGCTCATCCGTGG-TTACGTGACGAAAACCCCGGTTTGC 1426
Query 1229 TTCTGGATTTCTCTATCTACAAATTGGTGAAATCTTATATTCGTGCAAGC-CCTTTCCGA 1287
|||| |||||||| ||||||| ||||| || || ||||| ||||| | |||||||||
Sbjct 1427 TTCTTGATTTCTCGGTCTACAAGTTGGTCAAGTCCTATATCCGTGCCT-CACCTTTCCGA 1485
Query 1288 CGAGCAGCACTTAAGTCGCTATCGAAAGCTATGCCCGAAGAAGAACTCGTATTCCTTAAA 1347
||| ||||||||||| | || ||||||||||| || || |||||||| || ||||||||
Sbjct 1486 CGATCAGCACTTAAGGCTCTCTCGAAAGCTATACCTGATGAAGAACTTGTGTTCCTTAAG 1545
Query 1348 GCACAGTTTATGCTTTTGGAGCC-AGAAGATGGAGGCTTGCATC--TTCACAATTTCACC 1404
|||||||| ||||| |||| || | |||| |||||| | ||| || || ||||||
Sbjct 1546 GCACAGTTCATGCTCCTGGATCCTA-AAGACGGAGGCCT--ATCCCTTAACTGTTTCACA 1602
Query 1405 ACGG-TTCTGACAAGATATGCTACAGATGCTATGATCGAATCTAGGCTTCCTGACATTTT 1463
| || || | |||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 1603 ATGGCTT-TAACAAGATATGCTACTGATGCTATGATGGAATCAAGGCTTCCTGACATTTT 1661
Query 1464 AAACATGATGCAACCAT-TGGCACATAAAAAA-CTAGATTTTGAAGAGTTTTGTGCGGCT 1521
||| | ||||||||| | |||| || ||| || || || ||||||||||| |||||||||
Sbjct 1662 AAATACGATGCAACC-TCTGGCGCA-AAAGAAGCTTGACTTTGAAGAGTTCTGTGCGGCT 1719
Query 1522 GCGGTCAGTGTTTATCAACTTGAGGCTCTTGAAGAATGGGAACAGATCGCAACTAT-AGC 1580
|||||||||||||| ||||| |||||||||||||||||||||||||| |||||| | |||
Sbjct 1720 GCGGTCAGTGTTTACCAACTGGAGGCTCTTGAAGAATGGGAACAGATTGCAACT-TCAGC 1778
Query 1581 ATTTGACCACTTTGAACGTGAAGGAAGCCGAGCCATTTCCGTCCAAGAACTCGCTGAAGA 1640
|||||| |||||||||| |||||||| |||| ||| || |||||||||||||| | ||
Sbjct 1779 ATTTGAGCACTTTGAACATGAAGGAAACCGAATCATATCTGTCCAAGAACTCGCCGGGGA 1838
Query 1641 GATGGGTTTGGGACCAAATGCTTATCCTCTGCTCAAGGATTGGATCCGAAGTTTAGATGG 1700
|||| | ||||||| | ||| ||||||||||||||||||||||||||||||| |||||
Sbjct 1839 GATGAGCGTGGGACCGAGTGCATATCCTCTGCTCAAGGATTGGATCCGAAGTTCGGATGG 1898
Query 1701 GAAGCTGAATTTCTTAGGCTACGCCAAGTTCTTGCACGGTGTGACTGTACGAAGCTCGAG 1760
||||||| |||||| || ||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct 1899 AAAGCTGAGTTTCTTGGGGTACGCTAAGTTCTTGCATGGTGTGACCGTACGAAGCTCAAG 1958
Query 1761 CTCGAGACC 1769
|||||||||
Sbjct 1959 CTCGAGACC 1967
> AT2G46700.1 | Symbols: ATCRK3, CRK3 | CDPK-related kinase 3 |
chr2:19182724-19186578 REVERSE LENGTH=2180
Length=2180
Score = 252 bits (136), Expect = 1e-65
Identities = 734/1011 (73%), Gaps = 88/1011 (9%)
Strand=Plus/Plus
Query 400 AAGAATTTTGAAGGTAAGTATGAGCTT-GGGAGAGAGGTAGGTCGAGGGCATTTTGGTCA 458
|||||||||| | |||||| || || |||| ||| || ||||||||||||||||||||
Sbjct 557 AAGAATTTTGGTGCTAAGTACGA-ATTGGGGAAAGAAGTGGGTCGAGGGCATTTTGGTCA 615
Query 459 TACTTGTTG-GGCTAAAGCTAAGAAAGGGA-AGATCAAAGG-TCAAACTGTTGCAGTCAA 515
|||||||| ||| | |||||| |||| | || || || ||| || |||| |||||
Sbjct 616 TACTTGTTCTGGCCGTGG-TAAGAA-GGGAGATATTAA-GGATCATCCTATTGCTGTCAA 672
Query 516 AATCATCTCTAAATCTAAGATGACATCGGCT-TTGTCGATTGAAGATGTTCGTC-GAGAG 573
|||||||| || ||||||||||| | || ||| | |||||||||||||| | | |||
Sbjct 673 GATCATCTCCAAGGCTAAGATGACAACAGCAATTG-CAATTGAAGATGTTCG-CAGGGAG 730
Query 574 GTGAAATTGTTGAAAGCTTTGTCTGGGCATAG-TCATATGGTTAAGT-TCTACGATG--T 629
||||| || ||||| | || ||||| || | | || | | || | | || |||| |
Sbjct 731 GTGAAGTTACTGAAATCATTATCTGGACACAAAT-ATTTAATCAAATAT-TATGATGCAT 788
Query 630 GTTCGAGGATTCGGATAATGTCTTTGTTGTTATGGAGTTATGTGAAGGTGGAGAGCTATT 689
|| ||||| | |||| || | | || |||||||| ||||| |||||||| || ||
Sbjct 789 GT--GAGGACGCCAATAACGTATACATAGTCATGGAGTTGTGTGATGGTGGAGAACTTTT 846
Query 690 GGACAGTATTTTGGCGAGAGGTGGTCGATACCCGGAAGCA-GATGCTAAG-CGTATACTT 747
|||||| ||||| || || |||||| ||||||||| | | ||||| ||| || || |
Sbjct 847 GGACAGAATTTTAGCAAGGGGTGGTAAATACCCGGAGG-ATGATGCAAAGGCG-ATTGTC 904
Query 748 GTACAGATTTTATCTGCAACGGCTTTTT-TCCATCTTCAAGGTGTTGTGCACCGTGATCT 806
||||| ||| || ||| | |||| || |||| ||||| |||||||||||||| ||
Sbjct 905 GTACAAATTCTAACTGTTGTTTCATTTTGTC-ATCTCCAAGGAGTTGTGCACCGTGA-CT 962
Query 807 GAAA-CCGGAGAATTTTCTCTTTACCAGCAAAAAT-GAGGA-TGCAATACTC-AAGGTCA 862
||| || ||||||||||| ||||| | ||| || || | || ||| || | |
Sbjct 963 TAAAGCCAGAGAATTTTCTATTTAC-ATCAAGCCGCGAAGACT-CAG-ACTTGAAACTTA 1019
Query 863 TAGATTTTGG-CTTGTCTGA-TT-ACGCTAGAT-TCGATCAGCGTCTCAACGATGTGGTA 918
| |||||||| || || || || | |||| | ||| | | || || ||| | ||
Sbjct 1020 TTGATTTTGGTCTC-TCAGACTTTAT--TAGACCT-GATGAAAGACTGAATGATATAGTT 1075
Query 919 GGAAGTGCATACTATGTTGCACCTGAAGTACTT-CACAGATCATATAGCACT-GAAGCAG 976
|||||||| |||||||| || |||||||| || ||||| ||||||||| || || || |
Sbjct 1076 GGAAGTGCCTACTATGTCGCGCCTGAAGTT-TTACACAGGTCATATAGC-CTTGAGGCTG 1133
Query 977 ATATATGGAGCATTGGTGTCATATCTTACATAT-TACTCT---GTGGAAGTAGACCTTTT 1032
|||||||||| ||||| || ||| | |||||| |||||| ||||||| ||||||||
Sbjct 1134 ATATATGGAGTATTGGAGT--TAT-T-ACATATATACTCTTATGTGGAAGCCGACCTTTT 1189
Query 1033 TACGG-ACGAACCGAGTCTGCAATTTTTCGTTGTGTTCTTAGAGC-GAATCCTAATT-TC 1089
| || ||| || || |||| ||| ||||| ||| || ||| | ||| || || | |
Sbjct 1190 TG-GGCACGGACAGAATCTGGAATCTTTCGCACTGTACTAAGAACTGAA-CCAAACTAT- 1246
Query 1090 GAAGATTTACCGTGGCCTTCCATAT-C-TCCTATTGCCAAAGACTTTGTGAAAAGGCTTT 1147
|| || |||| |||||||| | | | || | | ||||| ||||||||| | |||
Sbjct 1247 GATGACGTACCTTGGCCTTCT-TGTTCATCAGAAGGT-AAAGATTTTGTGAAACGACTTC 1304
Query 1148 TGAACAAAGACCATAGGAAAAGAATGACAGCTGCTCAAGCTTT-AGCTCATCCATGGCTT 1206
| ||||||||| ||||||| ||||| | || | ||||||||| | ||||||| ||| ||
Sbjct 1305 TCAACAAAGACTATAGGAAGCGAATGTCTGCAGTTCAAGCTTTGA-CTCATCCGTGG-TT 1362
Query 1207 -CGAGACGAAAATCCTG-GTTTGCTTCTGGA--TTTCTCTATCTACAAATTGGTGAAATC 1262
|| || || | || || | || ||| | || ||| | ||||| || ||||| ||| |
Sbjct 1363 ACGGGATGATAGTCGTGTGATTCCTT-TAGACATTT-TG-ATCTATAAGTTGGTCAAAGC 1419
Query 1263 TTATATT-CGTGCAAGC-CCT-TTCCGACGAGCAGCACTTAA-GTCGCTATCGAAAGCTA 1318
|| || | || | | ||| || ||||||| || |||| | ||||| | ||||| |
Sbjct 1420 CTAC-TTGCACGCGA-CACCTCTTA-GACGAGCTGCT-TTAAAGGCGCTAGCAAAAGC-A 1474
Query 1319 T-GCCCGAAGAA-GAACTCGTAT-TCCTTAAAGCACAGTTTATGCTTTTGG 1366
| | |||| ||| || || || | || ||| ||||||||| ||||| ||||
Sbjct 1475 TTGACCGA-GAACGAGCTAGTCTATC-TTAGAGCACAGTTCATGCTGTTGG 1523
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97188255120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5