BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg485308
Length=2011
Score E
Sequences producing significant alignments: (Bits) Value
AT3G49510.1 | Symbols: | F-box family protein | chr3:18353842-... 2575 0.0
AT3G49520.1 | Symbols: | F-box and associated interaction doma... 1013 0.0
AT1G54550.1 | Symbols: | F-box and associated interaction doma... 579 5e-164
AT4G17200.1 | Symbols: | F-box and associated interaction doma... 265 1e-69
AT1G67450.1 | Symbols: | F-box and associated interaction doma... 108 3e-22
AT5G36730.1 | Symbols: | F-box and associated interaction doma... 97.1 6e-19
AT5G36820.1 | Symbols: | F-box and associated interaction doma... 97.1 6e-19
AT1G25150.1 | Symbols: | F-box family protein | chr1:8821008-8... 82.4 2e-14
AT1G25055.1 | Symbols: | F-box family protein | chr1:8806607-8... 82.4 2e-14
AT1G24881.1 | Symbols: | F-box family protein | chr1:8784036-8... 82.4 2e-14
AT1G25211.1 | Symbols: | F-box family protein | chr1:8835386-8... 82.4 2e-14
AT1G24800.1 | Symbols: | F-box family protein | chr1:8769660-8... 82.4 2e-14
AT3G16880.1 | Symbols: | F-box and associated interaction doma... 75.0 3e-12
AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | ch... 71.3 3e-11
AT3G22770.1 | Symbols: | F-box associated ubiquitination effec... 65.8 2e-09
AT3G16820.1 | Symbols: | F-box and associated interaction doma... 60.2 7e-08
AT5G60560.1 | Symbols: | F-box and associated interaction doma... 52.8 1e-05
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 52.8 1e-05
AT3G25090.1 | Symbols: | F-box associated ubiquitination effec... 52.8 1e-05
AT3G20690.1 | Symbols: | F-box and associated interaction doma... 52.8 1e-05
> AT3G49510.1 | Symbols: | F-box family protein | chr3:18353842-18356508
FORWARD LENGTH=2038
Length=2038
Score = 2575 bits (1394), Expect = 0.0
Identities = 1838/2044 (90%), Gaps = 63/2044 (3%)
Strand=Plus/Plus
Query 1 AAATCTCTGGAGAAAGTTTTGAAGAATGACGACAATTTCCGATCTATCAGAAGATTTGGT 60
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 25 AAATTTCTGGAGAAAGTTTTGAAGAATGACGACAATTTCCGATCTATCAGATGATTTGGT 84
Query 61 AGGTGAGATTCTTTCTTGGGTTCCATTTACATCTCTTACCGCAGTGCGATCTACTTGTAA 120
|||||| ||||||||| ||||||||||||||||||| | | |||||||||||||||||||
Sbjct 85 AGGTGATATTCTTTCTAGGGTTCCATTTACATCTCTAATCTCAGTGCGATCTACTTGTAA 144
Query 121 AAAGTGGAATGCTTTATCGAAAAATCACATCTTTGGTAGAAAAACAGCATCAAGGAATCA 180
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 145 AAAGTGGAATGCTTTATCGAAAAATCAGATCTTTGGTAGAAAAACAGCAGCAAGGAATCA 204
Query 181 GTTTCTGGAGTTCATGGTTGC-AGATTCTAGGGTTTGTTCTTTGAGATTAGATCTCCAAG 239
||||| ||||||||| || | ||||||||| ||||||||||||||||||||||| ||||
Sbjct 205 ATTTCTAGAGTTCATGATT-CTAGATTCTAGAGTTTGTTCTTTGAGATTAGATCTTCAAG 263
Query 240 GAATCCGTAACGACGACGTAGAAGACTACGTTGATTCATCTATGAAGC-AGATAACTATA 298
||||||||||||| ||| |||||||| ||||||| |||||||||||| | |||| ||||
Sbjct 264 GAATCCGTAACGAAGACAAAGAAGACTTCGTTGATCCATCTATGAAGCTA-ATAAGTATA 322
Query 299 CCTAATAATGATGATCAAGTCGAGATATCTCAAGTCTATCACTGCGATGGCTTATTGTTA 358
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 323 CCTAGTAATGATGATCAAGTCGAGATATCTCAAGTCTATCATTGCGATGGCTTATTGTTA 382
Query 359 TGCATCGCCAAAGATAACTCG-AGGCTCTTTGTGTGGAATCCGTATCTAGGGCAAACCAA 417
|||||||||||||| |||||| | | |||||||||||||||||||| | |||||||| ||
Sbjct 383 TGCATCGCCAAAGAGAACTCGAATG-TCTTTGTGTGGAATCCGTATTTGGGGCAAACGAA 441
Query 418 ATGGATCCAACCAAGAAACA-AGTTCCACAAATATGACAGGTTTGCTCTCGGATACGACA 476
|||||| | ||||||||||| | ||||||| |||||||||||||||||| ||||||||||
Sbjct 442 ATGGATTCGACCAAGAAACACA-TTCCACAGATATGACAGGTTTGCTCTTGGATACGACA 500
Query 477 ACAACCGTAACCACAAAATCTTGAGGTTTCTTTATGATGAAGAGAACAACGAAAGCTGTC 536
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||
Sbjct 501 ACAACCGTAACCACAAAATCTTGAGGTTTCTCTATGATGAAGAGAGCAACGAAAGCAGTC 560
Query 537 GAAGAACTCACATTGATGTATACGATTTCAGCTCTGATTCATGGAGGGTTCTTGATGTCA 596
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 561 GAAGAACTCACATTGATGTATACGATTTTAGCTCTGATTCATGGAGGGTTCTTGATGTCA 620
Query 597 ATCCTGACTGGGATATTATACCTTTTTATC-GCAGCGGCGTGTCTTTGAAGGGAAATACT 655
|||||||||| | | |||||| ||||||| | | ||| |||||||||||||||||||||
Sbjct 621 ATCCTGACTGTG--A-TATACCGTTTTATCAG-ACCGGAGTGTCTTTGAAGGGAAATACT 676
Query 656 TACTTCTTCGGTCAAGAAGTAACACAAGCGA-GTAAGGTAACAAACATTGAAACTTGTTT 714
|||||||||||||||||||| |||||||||| | || |||||| | ||||||||||||||
Sbjct 677 TACTTCTTCGGTCAAGAAGTGACACAAGCGACG-AAAGTAACAGAGATTGAAACTTGTTT 735
Query 715 ACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCACCC 774
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 736 ACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCGTGTTTGCCTCTGCTGTTTTACCC 795
Query 775 TCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGT 834
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 TCCCTGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGT 855
Query 835 GTTATACAACCACTACGTCACATCTGAGATTATAGAGATTAGGATTTCGACTAAGATTGA 894
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 856 GTTATACAACCACTACGTCACAGCTGAGATTATAGAGATTAGGATTTCGACTAAGATTGA 915
Query 895 ACCCAATGCGGTATTGTGGAGCTCTTTTTTGACAGTGGATATGTCAGTAGTCAATGGTTT 954
|||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 916 ACCCAATGCGGTATCCTGGAGCTCTTTTTTGACTGTGGATATGTCACTAGTCAATGGTTT 975
Query 955 ACCGGATGATTTTTCGATGTACTTTGAAGCTAAGAGCTTCTTCATTGACGAGGAGAAGAA 1014
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 976 ACCGGATCATTTTTCGATGTACTTTGAAGCTAAGAGCTTCTTCATTGACGAGGAGAAGAA 1035
Query 1015 AGTCGTTGTGCTTTTTGATAGTAAAGTGATCGAGACCTGTCGCTACCAAATGGCTTACAT 1074
||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1036 AGTTGTTGTGCTTTTTGATAGTAAAGAGATCAAGACCTGTCGCTACCAAATGGCTTACAT 1095
Query 1075 CGTTGGAGATGATGGATACTTCAAATCTGTCAACATCGGAGTAAATG-ATCA-AGTCGAG 1132
|||||||||||||||||||||||||||||||||||| |||| ||| | | | | | |||
Sbjct 1096 CGTTGGAGATGATGGATACTTCAAATCTGTCAACATTGGAGAAAAAGTAGGAGA-TAGAG 1154
Query 1133 ATATCTCAA-G-TCTATCAC-TGCGATGGCT-TATTGTTATGCATCGCCAAAAATAACTC 1188
| | || | | | ||| || | || | || |||||||||||| || | |||||
Sbjct 1155 AAAGA--AACGGT-TCTCAAATGAAAAC-CTCTCTT-TTATGCATCGCCGAAGACAACTC 1209
Query 1189 GAGTCTTATGGTATGGAATCCGTATCTGGGGCAAACGAAATGGATTCGACCCAGAAACAC 1248
| | ||| ||||||||||||||||| || | ||||| ||||||||||||| ||||||||
Sbjct 1210 GGGACTTGTGGTATGGAATCCGTATTTGTGTCAAACCAAATGGATTCGACTTAGAAACAC 1269
Query 1249 ATTCCACAGAGCTGACA-GCTTTGCTCTTGGATACGACAACAACCGTAACCACAAAATCT 1307
|||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||
Sbjct 1270 ATTCCACAGATATGACGTG-TTTGCTCTTGGACACGACAACAACCGTAACCACAAAATCT 1328
Query 1308 TGAGGTTTCTTTATGATGCCGAGA-GAAACAGAACCGGTCAAGGATGGGTCATTGATGTA 1366
|||||||||||||||||||| ||| | | ||||||||||| ||| | | || ||||||
Sbjct 1329 TGAGGTTTCTTTATGATGCCAAGAAGTA-CAGAACCGGTCGCGGACGCGACAATGATGTC 1387
Query 1367 TACGATTTTAGTTCTGATTCATGGAGG-G--TTCTTGATGTTAATGCCGATTGGGATGAA 1423
||||||||||| ||||||||||||||| | || ||||||||||| || | ||| ||||
Sbjct 1388 TACGATTTTAGCTCTGATTCATGGAGGAGGGTTTTTGATGTTAATCCCCACAGGGGTGAA 1447
Query 1424 CTGTTTTATCAGAGTGGCGTGTCTTTGAAGGGAAATTCATATTTTTTCGCTCGAGAGGTA 1483
||||||||| | ||||||||||| ||||||||||||||||| ||||||| || |||||||
Sbjct 1448 CTGTTTTATTACAGTGGCGTGTCCTTGAAGGGAAATTCATACTTTTTCGGTCAAGAGGTA 1507
Query 1484 ACAACAGAGGCAGAAGTGGGGAAAGAAGACTTGTTGGTAACAGAGATTGA-AGATTATTT 1542
|||| ||||| ||||| || ||||| || | || || | | || |||||||||
Sbjct 1508 ACAATAGAGGAAGAAG-----AA-GAAGAA--GT-GATATCACA-ACCGAGAGATTATTT 1557
Query 1543 ACTCTGTTTTGATGTTACAACAGAGAGATTTGGACCGCGTTTGTCTCTGCCGTTTAACCC 1602
||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1558 ACTATGTTTTGATTTTACAACCGAGAGATTTGGACCGCGTTTGTCTCTGCCGTTTAACCC 1617
Query 1603 TCCCTCTCCTATTTTTGAATATTTGACTCTATCTTGGGCTAGAGATGATAAGCTCGCTGT 1662
||||||||||| |||||| |||||||||||||| |||||||||||||| ||||| |||||
Sbjct 1618 TCCCTCTCCTAATTTTGACTATTTGACTCTATCATGGGCTAGAGATGAGAAGCTGGCTGT 1677
Query 1663 GTTATATAGCCACTACGACACATC-TGAGATT-TACGAGATTTGGATTTCGACTAAGATT 1720
|||||||| ||||||| ||||| | ||||||| || ||||||||||||||||||||||||
Sbjct 1678 GTTATATAACCACTACAACACA-CGTGAGATTATA-GAGATTTGGATTTCGACTAAGATT 1735
Query 1721 GAGCCCAACGCCGTATCGTGGAGCACTTTTTTGACAGTGGATAAGTCACTAATCAATGGT 1780
|| |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1736 GAACCCAACACGGTATCGTGGAGCACTTTTTTGACAGTGGATACGTCACTAATCAATGGT 1795
Query 1781 TT------T--T----CAACTTTCTATG-ACCCTATGAGCTTCTTCATTGATGAGGAGAA 1827
|| | | |||||||||||| ||| || ||||||||||||||||||||||||
Sbjct 1796 TTACCGGATCGTTTTTCAACTTTCTATGGACC-TAGGAGCTTCTTCATTGATGAGGAGAA 1854
Query 1828 GAAAGTAGCTGTGTTTTTTGATATTAAAGGGACCGAGACCGGTTGTTACCAAATCGCTTG 1887
|||||| |||||||||||||||| |||||||||||||||||||||||||||| | ||||
Sbjct 1855 GAAAGTCGCTGTGTTTTTTGATAATAAAGGGACCGAGACCGGTTGTTACCAAGTGGCTTA 1914
Query 1888 CATCATTGGAGATAATGGATACTTCAAATCTGTCAACATTGGAGTAATCTCGAACTCCCA 1947
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1915 CATCATTGGAGATAATGGATACTTCAAATCTGTCAAAATTGGAGTAATCTCGAACTCCCA 1974
Query 1948 GTGGAAACAAGGCAAACTTGTGTGCTCTTCATATGTTCCAAGTTTAGTGCAACTGCAAGA 2007
|||| ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1975 GTGGCAACAAGGCATACTTGTGTGCTCTTCTTATGTTCCAAGTTTAGTGCAACTACAAGA 2034
Query 2008 TTAG 2011
||||
Sbjct 2035 TTAG 2038
Score = 756 bits (409), Expect = 0.0
Identities = 702/835 (84%), Gaps = 53/835 (6%)
Strand=Plus/Plus
Query 1119 ATGATCAAGTCGAGATATCTCAAGTCTATCACTGCGATGGCTTATTGTTATGCATCGCCA 1178
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 333 ATGATCAAGTCGAGATATCTCAAGTCTATCATTGCGATGGCTTATTGTTATGCATCGCCA 392
Query 1179 AAAATAACTCG-A-GTCTTATGGTATGGAATCCGTATCTGGGGCAAACGAAATGGATTCG 1236
|| | |||||| | ||||| | || |||||||||||| ||||||||||||||||||||||
Sbjct 393 AAGAGAACTCGAATGTCTT-T-GTGTGGAATCCGTATTTGGGGCAAACGAAATGGATTCG 450
Query 1237 ACCCAGAAACACATTCCACAGAGCTGACAGCTTTGCTCTTGGATACGACAACAACCGTAA 1296
||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 451 ACCAAGAAACACATTCCACAGATATGACAGGTTTGCTCTTGGATACGACAACAACCGTAA 510
Query 1297 CCACAAAATCTTGAGGTTTCTTTATGATGCCGAGAGAAACAGAAC-CGGTC-AAGGA-TG 1353
||||||||||||||||||||| ||||||| ||||| ||| ||| | ||| ||| | |
Sbjct 511 CCACAAAATCTTGAGGTTTCTCTATGATGAAGAGAGCAAC-GAAAGCAGTCGAAGAACTC 569
Query 1354 GGTCATTGATGTATACGATTTTAGTTCTGATTCATGGAGGGTTCTTGATGTTAATGCC-G 1412
||||||||||||||||||||| |||||||||||||||||||||||||| ||| || |
Sbjct 570 A--CATTGATGTATACGATTTTAGCTCTGATTCATGGAGGGTTCTTGATGTCAAT-CCTG 626
Query 1413 ATTGGGATGA-ACTGTTTTATCAGAGTGGCGTGTCTTTGAAGGGAAATTCATATTTTTTC 1471
| || ||| | || ||||||||||| || |||||||||||||||||| | || || |||
Sbjct 627 ACTGTGAT-ATACCGTTTTATCAGACCGGAGTGTCTTTGAAGGGAAATACTTACTTCTTC 685
Query 1472 GCTCGAGAGGTAACAACAGAGGCAGAAGTGGGGAAAGAAGACTTGTTGGTAACAGAGATT 1531
| || ||| || ||| || || | || | |||| | ||||||||||
Sbjct 686 GGTCAAGAAGTGACA-CA-AG-C-GACG-----AAAG-----T-------AACAGAGATT 724
Query 1532 GAAGA-TTATTTACTCTGTTTTGATGTTACAACAGAGAGATTTGGACCGCGTTTGTCTCT 1590
||| | || |||||||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct 725 GAA-ACTTGTTTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCGTGTTTGCCTCT 783
Query 1591 GCCGTTTAACCCTCCCTCTCCTATTTTTGAATATT-TGACTCTATCTTGGGCTAGAGATG 1649
|| |||| ||||||||| ||||| ||||||| | | ||||||||||||||| ||||||||
Sbjct 784 GCTGTTTTACCCTCCCTGTCCTAGTTTTGAA-ACTGTGACTCTATCTTGGGTTAGAGATG 842
Query 1650 ATAAGCTCGCTGTGTTATATAGCCACTACGACACATCTGAGATT-TACGAGATTTGGATT 1708
| ||||||||||||||||| | |||||||| |||| |||||||| || |||||| |||||
Sbjct 843 AGAAGCTCGCTGTGTTATACAACCACTACGTCACAGCTGAGATTATA-GAGATTAGGATT 901
Query 1709 TCGACTAAGATTGAGCCCAACGCCGTATCGTGGAGCACTTTTTTGACAGTGGATAAGTCA 1768
|||||||||||||| ||||| || ||||| |||||| |||||||||| ||||||| ||||
Sbjct 902 TCGACTAAGATTGAACCCAATGCGGTATCCTGGAGCTCTTTTTTGACTGTGGATATGTCA 961
Query 1769 CTAATCAATGGTTTTTCA-A-C-TTTCT--ATG-ACCCT-A---T--GAGCTTCTTCATT 1816
||| |||||||||| | | | ||| | ||| || | | | |||||||||||||
Sbjct 962 CTAGTCAATGGTTTACCGGATCATTTTTCGATGTACTTTGAAGCTAAGAGCTTCTTCATT 1021
Query 1817 GATGAGGAGAAGAAAGTAGCTGTGTTTTTTGATATTAAAGGGACCGAGACCGGTTGTTAC 1876
|| |||||||||||||| | |||| ||||||||| ||||| || | ||||| || | |||
Sbjct 1022 GACGAGGAGAAGAAAGTTGTTGTGCTTTTTGATAGTAAAGAGATCAAGACCTGTCGCTAC 1081
Query 1877 CAAATCGCTTGCATCATTGGAGATAATGGATACTTCAAATCTGTCAACATTGGAG 1931
||||| |||| |||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1082 CAAATGGCTTACATCGTTGGAGATGATGGATACTTCAAATCTGTCAACATTGGAG 1136
Score = 656 bits (355), Expect = 0.0
Identities = 655/793 (83%), Gaps = 48/793 (6%)
Strand=Plus/Plus
Query 356 TTATGCATCGCCAAAGATAACTCGAGGCTCTT-T-GTGTGGAATCCGTATCTAG-GGCAA 412
|||||||||||| |||| |||||| || ||| | || |||||||||||| | | | |||
Sbjct 1187 TTATGCATCGCCGAAGACAACTCG-GG-ACTTGTGGTATGGAATCCGTAT-TTGTGTCAA 1243
Query 413 ACCAAATGGATCCAACCAAGAAACA-AGTTCCACAAATATGACAG-GTTTGCTCTCGGAT 470
||||||||||| | || ||||||| | ||||||| ||||||| | ||||||||| |||
Sbjct 1244 ACCAAATGGATTCGACTTAGAAACACA-TTCCACAGATATGAC-GTGTTTGCTCTTGGAC 1301
Query 471 ACGACAACAACCGTAACCACAAAATCTTGAGGTTTCTTTATGATG--AAGA-GAACAACG 527
||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |
Sbjct 1302 ACGACAACAACCGTAACCACAAAATCTTGAGGTTTCTTTATGATGCCAAGAAGTACA--G 1359
Query 528 AAAGCTGTCGAAGAACTC-ACATTGATGTATACGATTTCAGCTCTGATTCATGGAGG-G- 584
|| | |||| || | | ||| |||||| |||||||| |||||||||||||||||| |
Sbjct 1360 AAC-CGGTCGCGGA-CGCGACAATGATGTCTACGATTTTAGCTCTGATTCATGGAGGAGG 1417
Query 585 -TTCTTGATGTCAATCCTGACTGGGATATTATACCT-TTTTATCGCAGCGGCGTGTCTTT 642
|| ||||||| ||||| || ||| | | || | |||||| ||| |||||||| ||
Sbjct 1418 GTTTTTGATGTTAATCCCCACAGGGGTG--A-AC-TGTTTTATTACAGTGGCGTGTCCTT 1473
Query 643 GAAGGGAAATACTTACTTCTTCGGTCAAGAAGTAACAC-A-AGC--GA-GTA-A-G--GT 693
|||||||||| | ||||| ||||||||||| |||||| | || || | | | | ||
Sbjct 1474 GAAGGGAAATTCATACTTTTTCGGTCAAGAGGTAACAATAGAGGAAGAAGAAGAAGAAGT 1533
Query 694 -A-A-CA-AACATTGAAACTTGTTTACTCTGTTTTGATTTTACAACAGAGAGATTTGGAC 749
| | || ||| || | || |||||| ||||||||||||||||| |||||||||||||
Sbjct 1534 GATATCACAACCGAGAGA-TTATTTACTATGTTTTGATTTTACAACCGAGAGATTTGGAC 1592
Query 750 CACGTTTGCCTCTGCTGTTTCACCCTCCATGTCCTAGTTTTGAA-ACTGTGACTCTATCT 808
| |||||| |||||| |||| ||||||| | ||||| |||||| | | ||||||||||
Sbjct 1593 CGCGTTTGTCTCTGCCGTTTAACCCTCCCTCTCCTAATTTTGACTATT-TGACTCTATCA 1651
Query 809 TGGGTTAGAGATGAGAAGCTCGCTGTGTTATACAACCACTACGTCACATC-TGAGATTAT 867
|||| ||||||||||||||| ||||||||||| ||||||||| |||| | |||||||||
Sbjct 1652 TGGGCTAGAGATGAGAAGCTGGCTGTGTTATATAACCACTACAACACA-CGTGAGATTAT 1710
Query 868 AGAGATTAGGATTTCGACTAAGATTGAACCCAATGCGGTATTGTGGAGCTCTTTTTTGAC 927
||||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||||||
Sbjct 1711 AGAGATTTGGATTTCGACTAAGATTGAACCCAACACGGTATCGTGGAGCACTTTTTTGAC 1770
Query 928 AGTGGATATGTCAGTAGTCAATGGTTTACCGGAT-GATTTTTCGA-TGTACTTTGAAGCT 985
|||||||| |||| || ||||||||||||||||| | |||||| | | | || || | ||
Sbjct 1771 AGTGGATACGTCACTAATCAATGGTTTACCGGATCG-TTTTTCAACTTT-CTATGGACCT 1828
Query 986 AAGAGCTTCTTCATTGACGAGGAGAAGAAAGTCGTTGTGCTTTTTGATAGTAAAGTGATC 1045
| ||||||||||||||| |||||||||||||||| |||| ||||||||| ||||| || |
Sbjct 1829 AGGAGCTTCTTCATTGATGAGGAGAAGAAAGTCGCTGTGTTTTTTGATAATAAAGGGACC 1888
Query 1046 GAGACCTGTCGCTACCAAATGGCTTACATCGTTGGAGATGATGGATACTTCAAATCTGTC 1105
|||||| || | |||||| ||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1889 GAGACCGGTTGTTACCAAGTGGCTTACATCATTGGAGATAATGGATACTTCAAATCTGTC 1948
Query 1106 AACATCGGAGTAA 1118
|| || |||||||
Sbjct 1949 AAAATTGGAGTAA 1961
> AT3G49520.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:18359584-18360750 FORWARD LENGTH=1167
Length=1167
Score = 1013 bits (548), Expect = 0.0
Identities = 954/1135 (84%), Gaps = 87/1135 (8%)
Strand=Plus/Plus
Query 26 ATGACGACAATTTCCGATCTATCAGAAGATTTGGTAGGTGAGAT-TCTTTCTTGGGTTCC 84
||||||||||||||||||||| || | ||||||||| ||||| | |||||||||||||
Sbjct 1 ATGACGACAATTTCCGATCTACCATATGATTTGGTAAAAGAGATAT-TTTCTTGGGTTCC 59
Query 85 ATTTACATCTCTTACCGCAGTGCGATCTACTTGTAAAAAGTGGAATGCTTTATCGAAAAA 144
|||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||
Sbjct 60 ATTTACATCTCTTAGAGCAGTGCGATCTACTTGTAAAACGTGGAACGCTTTATCGAAAAA 119
Query 145 TCACATCTTTGGTAGAAAAA-CAGCATCAAGGAATCAGTTTCTGGAGTTCATGGTTGC-A 202
||| |||||||||| ||||| ||| | |||||||||||||||| ||||| ||| || | |
Sbjct 120 TCAGATCTTTGGTA-AAAAATCAGTAGCAAGGAATCAGTTTCTAGAGTTAATGATT-CTA 177
Query 203 GATTCTAGGGTTTGTTCTTTGAGATTAGATCTCCAAGGAATCCGTAACGACGACGTAGAA 262
||||||||||||||||| |||||||| ||||||||| |||||||||||| |||| ||||
Sbjct 178 GATTCTAGGGTTTGTTCCTTGAGATTCGATCTCCAAAAAATCCGTAACGAAGACGAAGAA 237
Query 263 GACTACGTTGATTCATCTATGAAGCAGATAA-CTATACCTAATAATGATGATCAAGTCGA 321
|||| |||||| |||||||||| || |||| | ||||||||||||||||||||||||||
Sbjct 238 GACTTGGTTGATCCATCTATGAAACAAATAAGC-ATACCTAATAATGATGATCAAGTCGA 296
Query 322 GATATCTCAAGTCTATCACTGCGATGGCTTATTGTTATGCATCGCCAAAGATAACTCGAG 381
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 297 GATATCTCGAGTCTATCACTGCGATGGCTTATTGTTATGCATCCCCAAAGATAACTCGAG 356
Query 382 GCTCTT-TGTG-TGGAATCCGTATCTAGGGCAAACCAAATGGATCCAACC-AAGAAACA- 437
|||| ||| |||||||||||| | |||||||||||| |||| | ||| || |||||
Sbjct 357 --TCTTATGTTATGGAATCCGTATTTGGGGCAAACCAAACGGATTCGACCCAA-AAACAC 413
Query 438 AGTTCCACAAATATGACAGGTTTGCTCTCGGATACGACAACAACCGTAACCACAAAATCT 497
| ||||||| | ||||||| |||||||| |||||| | | ||||||||||||||||||||
Sbjct 414 A-TTCCACAGAGATGACAGCTTTGCTCTGGGATAC-A-A-CAACCGTAACCACAAAATCT 469
Query 498 TGAGGTTTCTTTATGATGAAGAGAACAACGAAAGCTGTCGAAGAACTCACATTGATGTAT 557
||||||| | | || | ||| |||||||| | | | | | ||||||| |
Sbjct 470 TGAGGTTG----A--ACGA-G-GAA-AACGAAAG-T--C-A-----T-A--TTGATGTCT 508
Query 558 ACGATTTCAGCTCTGATTCATGGAGG--G-TTCTTGATG-TCAATCC-TGACT-GGGATA 611
||||||| |||||||||||||||||| | ||| ||||| | ||||| | | | |||||
Sbjct 509 ACGATTTTAGCTCTGATTCATGGAGGACGGTTCCTGATGAT-AATCCCT-A-TAGGGATG 565
Query 612 TTATAC-CTTTTTATCGCAGCGGCGTGTCTTTGAAGGGAAATACTTACTTCTTCGGTCAA 670
| || | ||| ||| || ||||||||||||||||||||| ||||||| |||| || |
Sbjct 566 --A-ACTCATTT-ATCAAAGTGGCGTGTCTTTGAAGGGAAATGCTTACTTTTTCGATCGA 621
Query 671 GAAGTAAC-ACA-AG-C-GA-GT----A-AG--G--TA----ACAA-A--CATTGAA-AC 708
|| ||||| ||| || | || || | || | | | || | ||||||| |
Sbjct 622 GAGGTAACGACAGAGGCAGAAGTGGGGACAGAAGACTTGTTGATAACAGGCATTGAAGA- 680
Query 709 TTGTTTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTT 768
|| ||||| |||||||||||| ||||| |||||||||||||| ||||||||||| | |||
Sbjct 681 TTATTTACGCTGTTTTGATTTCACAACCGAGAGATTTGGACCGCGTTTGCCTCTTCCGTT 740
Query 769 TCACCCT-CCATGTCCTAGTTTTGAA-ACTGTGACTCTATCTTGGGTTAGAGATGAGAAG 826
| | ||| || | ||||||||||||| | | || |||||||||||| ||||||||| |||
Sbjct 741 T-ATCCTTCCCTCTCCTAGTTTTGAATATT-TGGCTCTATCTTGGGCTAGAGATGATAAG 798
Query 827 CTCGCTGTGTTATACAACCACTACGTCACATCTGAGATTATAGAGATTAGGATTTCGACT 886
|||||||||||||| | |||||||| ||||| ||| || ||||||||| |||||||||||
Sbjct 799 CTCGCTGTGTTATATAGCCACTACGACACATTTGACATCATAGAGATTTGGATTTCGACT 858
Query 887 AAGATTGAACCCAATGCGGTATT-GTGGAGCTCTTTTTTGACAGTGGATATGTCAGTAGT 945
|||||||| ||||||||||| || ||||||| ||||||||| ||||||||||||| || |
Sbjct 859 AAGATTGAGCCCAATGCGGT-TTCGTGGAGCACTTTTTTGAAAGTGGATATGTCACTAAT 917
Query 946 CAATGGTTTACCGGATGATTTTTCGATGTAC-TTTGAAGCTAAGAGCTTCTTCATTGACG 1004
|||||||||| |||||||||||| ||| || |||||| |||| ||||| || || ||||
Sbjct 918 CAATGGTTTAACGGATGATTTTTTGAT-TAGATTTGAACCTAAAAGCTTTTTTATCGACG 976
Query 1005 AGGAGAAGAAAGTCGTTGTGCTTTTTGATAGTAAAGTGATC-GAGACCTGTCGCTACCAA 1063
||||||||||||||| ||| |||||||||| |||||||| | ||||||||||||||||||
Sbjct 977 AGGAGAAGAAAGTCGCTGTACTTTTTGATACTAAAGTGA-CAGAGACCTGTCGCTACCAA 1035
Query 1064 ATGGCTTACATCGTTGGAGATGATGGATACTTCAAATCTGTCAACATCGGAGTAA 1118
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1036 ATGGCTTACATCGTTGGAGATGATGGATACTTCAAATCTGTCAACATTGGAGTAA 1090
Score = 942 bits (510), Expect = 0.0
Identities = 786/912 (86%), Gaps = 47/912 (5%)
Strand=Plus/Plus
Query 1119 ATGATCAAGTCGAGATATCTCAAGTCTATCACTGCGATGGCTTATTGTTATGCATCGCCA 1178
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 284 ATGATCAAGTCGAGATATCTCGAGTCTATCACTGCGATGGCTTATTGTTATGCATCCCCA 343
Query 1179 AAAATAACTCGAGTCTTATGGTATGGAATCCGTATCTGGGGCAAACGAAATGGATTCGAC 1238
|| ||||||||||||||||| |||||||||||||| |||||||||| ||| |||||||||
Sbjct 344 AAGATAACTCGAGTCTTATGTTATGGAATCCGTATTTGGGGCAAACCAAACGGATTCGAC 403
Query 1239 CCAGAAACACATTCCACAGAGCTGACAGCTTTGCTCTTGGATACGACAACAACCGTAACC 1298
||| ||||||||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct 404 CCAAAAACACATTCCACAGAGATGACAGCTTTGCTCTGGGAT---ACAACAACCGTAACC 460
Query 1299 ACAAAATCTTGAGGTTTCTTTATGATGCCGA-GAGAAACAGAACCGGTCAAGGATGGGTC 1357
|||||||||||||| | ||| ||| || |||| ||| ||| | |
Sbjct 461 ACAAAATCTTGAGG------T-TGA--ACGAGGA-AAAC-GAA--AGTC----A----T- 498
Query 1358 ATTGATGTATACGATTTTAGTTCTGATTCATGGA-G--GGTTCTTGATGTTAATGCCGAT 1414
|||||||| ||||||||||| ||||||||||||| | ||||| ||||| |||| || ||
Sbjct 499 ATTGATGTCTACGATTTTAGCTCTGATTCATGGAGGACGGTTCCTGATGATAATCCCTAT 558
Query 1415 TGGGATGAACTGTTTTATCAGAGTGGCGTGTCTTTGAAGGGAAATTCATATTTTTTCGCT 1474
|||||||||| ||||||| |||||||||||||||||||||||| | || ||||||| |
Sbjct 559 AGGGATGAACTCATTTATCAAAGTGGCGTGTCTTTGAAGGGAAATGCTTACTTTTTCGAT 618
Query 1475 CGAGAGGTAACAACAGAGGCAGAAGTGGGGAAAGAAGACTTGTTGGTAACAGAG-ATTGA 1533
||||||||||| ||||||||||||||||||| ||||||||||||| |||||| | |||||
Sbjct 619 CGAGAGGTAACGACAGAGGCAGAAGTGGGGACAGAAGACTTGTTGATAACAG-GCATTGA 677
Query 1534 AGATTATTTACTCTGTTTTGATGTT-ACAACAGAGAGATTTGGACCGCGTTTGTCTCTGC 1592
||||||||||| |||||||||| || ||||| ||||||||||||||||||||| |||| |
Sbjct 678 AGATTATTTACGCTGTTTTGAT-TTCACAACCGAGAGATTTGGACCGCGTTTGCCTCTTC 736
Query 1593 CGTTTAACCCTCCCTCTCCTATTTTTGAATATTTGACTCTATCTTGGGCTAGAGATGATA 1652
|||||| || ||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 737 CGTTTATCCTTCCCTCTCCTAGTTTTGAATATTTGGCTCTATCTTGGGCTAGAGATGATA 796
Query 1653 AGCTCGCTGTGTTATATAGCCACTACGACACATCTGAGATT-TACGAGATTTGGATTTCG 1711
||||||||||||||||||||||||||||||||| ||| || || |||||||||||||||
Sbjct 797 AGCTCGCTGTGTTATATAGCCACTACGACACATTTGACATCATA-GAGATTTGGATTTCG 855
Query 1712 ACTAAGATTGAGCCCAACGCCGTATCGTGGAGCACTTTTTTGACAGTGGATAAGTCACTA 1771
||||||||||||||||| || || ||||||||||||||||||| |||||||| |||||||
Sbjct 856 ACTAAGATTGAGCCCAATGCGGTTTCGTGGAGCACTTTTTTGAAAGTGGATATGTCACTA 915
Query 1772 ATCAATGGTTTTTC--A--ACTTTCT-AT--GAC-----CCTATGAGCTTCTTCATTGAT 1819
||||||||||| | | | ||| | || || |||| ||||| || || ||
Sbjct 916 ATCAATGGTTTAACGGATGATTTTTTGATTAGATTTGAACCTAAAAGCTTTTTTATCGAC 975
Query 1820 GAGGAGAAGAAAGTAGCTGTGTTTTTTGATATTAAAGGGACCGAGACCGGTTGTTACCAA 1879
|||||||||||||| ||||| ||||||||| ||||| ||| |||||| || | ||||||
Sbjct 976 GAGGAGAAGAAAGTCGCTGTACTTTTTGATACTAAAGTGACAGAGACCTGTCGCTACCAA 1035
Query 1880 ATCGCTTGCATCATTGGAGATAATGGATACTTCAAATCTGTCAACATTGGAGTAATCTCG 1939
|| |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1036 ATGGCTTACATCGTTGGAGATGATGGATACTTCAAATCTGTCAACATTGGAGTAATCTCG 1095
Query 1940 AACTCCCAGTGGAAACAAGGCAAACTTGTGTGCTCTTCATATGTTCCAAGTTTAGTGCAA 1999
|| ||||| |||| | |||| |||||||| ||||||| ||||||||||||||| |||||
Sbjct 1096 AATTCCCATTGGATAGGAGGCGAACTTGTGCGCTCTTCTTATGTTCCAAGTTTATTGCAA 1155
Query 2000 CTGCAAGATTAG 2011
||||||| ||||
Sbjct 1156 CTGCAAGTTTAG 1167
> AT1G54550.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:20369651-20370986 FORWARD LENGTH=1336
Length=1336
Score = 579 bits (313), Expect = 5e-164
Identities = 549/657 (84%), Gaps = 39/657 (6%)
Strand=Plus/Plus
Query 21 GAAGAATGACGACAATTTCCGATCTATCAGAAGATTTGGTAGGTGAGAT-TCTTTCTTGG 79
|||||||| ||||| | |||||||| | || ||||||||| | || || | ||||| ||
Sbjct 34 GAAGAATGGCGACAGTAACCGATCTACCGGATGATTTGGTAAGAGAAATAT-TTTCTAGG 92
Query 80 GTTCCATTTACATCTCTTACCGCAGTGCGATCTACTTGTAAAAAGTGGAATGCTTTATCG 139
|||||||| |||||||| | |||||| |||||||||||||||||||||| ||| |||||
Sbjct 93 GTTCCATTGACATCTCTAAGAGCAGTGAGATCTACTTGTAAAAAGTGGAACGCTATATCG 152
Query 140 AAAAATCACATCTTTGGTAGAAAAA-CAGCATCAAGGAATCAGTTTC-TGGAGTTCATGG 197
||| || ||||||| |||| ||||| ||||| ||| ||||||| ||| ||||||||||||
Sbjct 153 AAATATGACATCTTAGGTA-AAAAAGCAGCAGCAAAGAATCAG-TTCTTGGAGTTCATGG 210
Query 198 TTGCAGATTCTAGGGTTTGTTCTTTGAGATTAGATCTCCAAGGAATCCGTAACGACGACG 257
|| |||||||||||||||||||||||||||||||||| ||||||||||||| | |||
Sbjct 211 TTACAGATTCTAGGGTTTGTTCTTTGAGATTAGATCTTCAAGGAATCCGTA--G-CGA-- 265
Query 258 TAGAAGACTACG-TTGAT-TCATCTATGAAGCAGATAACTATACCTAATAATGATGATCA 315
|||||| | | ||||| | |||||| ||||| |||| |||||||||||| | ||||||
Sbjct 266 -AGAAGATTT-GATTGATCT-ATCTATAAAGCAAATAAGTATACCTAATAAAGTTGATCA 322
Query 316 AGTCGAGATATCTCAAGTCTATCACTGCGATGGCTTATTGTTATGCATCGCCAAAGATAA 375
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 323 AGTCGAGATATCTCAAGTCTATCACTGTGATGGCTTATTGTTATGCATCGCCAAAGACAA 382
Query 376 CTCGAGGCTCTT-TG-TGTGGAATCCGTATCTAGGGCAAACCAAATGGATCCAACCAAGA 433
|||||| | || || | |||||||||||| ||||||| || |||| ||| |||||||||
Sbjct 383 CTCGAG--TGTTATGGTATGGAATCCGTATTTAGGGCAGACGAAATTGATTCAACCAAGA 440
Query 434 AACAAGTTCCACAAATATGACAGGTTTGCTCTCGGATACGACAACAACCGTAACCACAAA 493
|| || |||||| |||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 441 AAAAAACTCCACAGATATGACAAGTTTGCTCTTGGATACGACAACAACCGTAACCACAAA 500
Query 494 ATCTTGAGGTTTCTTTATGATGAAGAGAACAACGAAAGCTGTCGAAGAACTCACATTGAT 553
|| ||||||||||||||||| | ||| ||| |||| | ||| | | | |||||
Sbjct 501 ATTTTGAGGTTTCTTTATGAGGG-GAGTCCAA-GAAA-C-GTC-AT----T-A--TTGAT 548
Query 554 GTATACGATTTCAGCTCTGATTCATGGAGGGTTCTTGATGTCAATCCT-GACTGGGATAT 612
|| |||||||| ||||||||||||||||||||||||||| | || | || ||| ||
Sbjct 549 GTTTACGATTTTAGCTCTGATTCATGGAGGGTTCTTGATATTGATA-TAGATTGGCATG- 606
Query 613 TATACCTTTTTA-TCGCAGCGGCGTGTCTTTGAAGGGAAATACTTACTTCTTCGGTC 668
| || | |||| || || |||||||||||||||||||||||||||| || ||||
Sbjct 607 -A-AC-TGTTTAGTCACAATAGCGTGTCTTTGAAGGGAAATACTTACTTTTTTGGTC 660
Score = 353 bits (191), Expect = 3e-96
Identities = 310/365 (85%), Gaps = 18/365 (5%)
Strand=Plus/Plus
Query 1120 TGATCAAGTCGAGATATCTCAAGTCTATCACTGCGATGGCTTATTGTTATGCATCGCCAA 1179
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 317 TGATCAAGTCGAGATATCTCAAGTCTATCACTGTGATGGCTTATTGTTATGCATCGCCAA 376
Query 1180 AAATAACTCGAGTCTTATGGTATGGAATCCGTATCTGGGGCAAACGAAATGGATTCGACC 1239
| | ||||||||| |||||||||||||||||||| | ||||| ||||||| ||||| |||
Sbjct 377 AGACAACTCGAGTGTTATGGTATGGAATCCGTATTTAGGGCAGACGAAATTGATTCAACC 436
Query 1240 CAGAAACACATTCCACAGAGCTGAC-AGCTTTGCTCTTGGATACGACAACAACCGTAACC 1298
||||| | | |||||||| |||| || |||||||||||||||||||||||||||||||
Sbjct 437 AAGAAAAAAACTCCACAGATATGACAAG-TTTGCTCTTGGATACGACAACAACCGTAACC 495
Query 1299 ACAAAATCTTGAGGTTTCTTTATGATGCCGAGAGAAACAGAACCGGTCAAGGATGGGTCA 1358
||||||| ||||||||||||||||| | ||| || | ||| | ||| | | |
Sbjct 496 ACAAAATTTTGAGGTTTCTTTATGAGGG-GAGTCCAAGA-AAC-G-TCA----T---T-A 543
Query 1359 TTGATGTATACGATTTTAGTTCTGATTCATGGAGGGTTCTTGATGTTAATGCCGATTGGG 1418
||||||| ||||||||||| |||||||||||||||||||||||| || || ||||||
Sbjct 544 TTGATGTTTACGATTTTAGCTCTGATTCATGGAGGGTTCTTGATATTGATATAGATTGGC 603
Query 1419 ATGAACTGTTTTA-TCAGAGTGGCGTGTCTTTGAAGGGAAATTCATA-TTTTTTCGCTCG 1476
||||||||||| | ||| | | |||||||||||||||||||| | || |||||| | |||
Sbjct 604 ATGAACTGTTT-AGTCACAATAGCGTGTCTTTGAAGGGAAATACTTACTTTTTTGG-TCG 661
Query 1477 AGAGG 1481
| |||
Sbjct 662 AAAGG 666
Score = 250 bits (135), Expect = 4e-65
Identities = 363/468 (78%), Gaps = 36/468 (8%)
Strand=Plus/Plus
Query 1574 GGACCGCGTTTGTCTCTGCCGTTTAACCCTCCCTCTCCTATTTTTGAATATTTGACTCTA 1633
||||| |||||| || ||| |||||| ||||| |||| | |||||||||||||||||||
Sbjct 666 GGACCACGTTTGCCTATGCTGTTTAAACCTCCATCTCGTCGTTTTGAATATTTGACTCTA 725
Query 1634 TCTTGGGCTAGAGATGATAAGCTCGCTGTGTTATATAGCCA-CTACGACACATCT-G-AG 1690
||||| | |||| |||| || |||||||||||||| ||||| || | ||| || | | |
Sbjct 726 TCTTGTGTTAGAAATGAGAAACTCGCTGTGTTATACAGCCACCT-CAACAGATTTGGCAC 784
Query 1691 ATTTACGAGATTTGGATTTCGACTAAGATTGAGCCCAACGCCGTATCGTGGAGCACTTTT 1750
| || |||||||| ||||||||||||||||| |||| || ||||| |||| |||||||
Sbjct 785 A-ATA-GAGATTTGTATTTCGACTAAGATTGATCCCAGTGCAGTATCATGGACCACTTTT 842
Query 1751 TTGACAGTGGATAAGTCACTAATCAATGGTTTTTC----AAC-TTTCT-ATGAC-C---- 1799
|||| | | |||| | |||||||||||||||| | ||| ||| | | || |
Sbjct 843 TTGAGAATTGATATGACACTAATCAATGGTTTACCGGATAACTTTTTTGTTCACTCTTAT 902
Query 1800 -CTATGAGCTTCTTCATT-GATGAGGAGAAGAAAGTAGCTGTG-TTTT---T--TGATA- 1850
||| |||||| ||| || |||||||||||||| || |||||| |||| | | |
Sbjct 903 GCTACGAGCTTTTTC-TTCGATGAGGAGAAGAAGGTCGCTGTGCTTTTCGGTACAAACAG 961
Query 1851 TTAAAG-GGAC-CGAGACCGGT-TGT--TACCAAATCGCTTGCATCATTGGAGATAATGG 1905
|| || |||| |||||| || || ||||| | ||||||||| ||||||||| |||
Sbjct 962 ATATAGAGGACGTGAGACCTGTCAGTACTACCAGAGAGCTTGCATCGTTGGAGATAGTGG 1021
Query 1906 ATACTTCAAATCTGTCAACATTGGAGTA-ATCTCGAACTCCCAG-TGGAAACAAGGCAAA 1963
|||||||||| |||||||||| | | || | || || || ||| || || | || ||
Sbjct 1022 ATACTTCAAAGCTGTCAACATCGAACTAGTTTTC-AATTCACAGCTGCAATC-TTGCCAA 1079
Query 1964 CTTGTGTGCTCTTCATATGTTCCAAGTTTAGTGCAACTGCAAGATTAG 2011
|||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 1080 CTTGTGAGCTCTTCTTATGTTCCAAGTTTAGTGCAACTGCAAGATTAG 1127
> AT4G17200.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:9651108-9652253 FORWARD LENGTH=1146
Length=1146
Score = 265 bits (143), Expect = 1e-69
Identities = 631/850 (74%), Gaps = 100/850 (12%)
Strand=Plus/Plus
Query 26 ATGACGACAATTTCCGATCTATCAGAAGATTTGGTAGGTGAGATTCTTTCTTGGGTTCC- 84
||||||||||| || ||||| ||| |||||||||||| |||||||| || |||||||
Sbjct 1 ATGACGACAATGTCTGATCTTTCACCAGATTTGGTAGGGGAGATTCTCACTAGGGTTCCG 60
Query 85 ATTTACATCTCTT-ACCGCAGTGCGATCTACTTGTAAAAAGTGGAATGCTTTATCGAAA- 142
| | |||||| || | |||| || | |||||| |||| |||||| |||||||| |||
Sbjct 61 A-TGACATCT-TTGATTTCAGTACGGTGTACTTGCAAAATGTGGAACGCTTTATCCAAAG 118
Query 143 AATCACATCTTTGGTAGAAAAACAGCATCAAGGAATCAGTTTCT-GGAGTTCATGGTTGC 201
|| || ||| | || |||| ||||||| |||||| | ||| |||| | ||
Sbjct 119 AA-GGTAT-TTT-CT---TTAA-AGCAGCAAGGAAGCAGTTTATGGGA-TTCA-CGATG- 168
Query 202 A--GATTCTAGGGTTTGTTCTTTG-AGATTAGATCTCCAAGGAATCCGTAACGACGACGT 258
| ||||||||||||||||| || || || ||||||||||||||||| || || |||
Sbjct 169 ATGGATTCTAGGGTTTGTTCAATGAAG-TTTGATCTCCAAGGAATCCG-AA--ACAACGA 224
Query 259 AGAAGACTACGTTGATTCATCTATGAAGCAGATAACTATACCTAATAATGATGATCAAGT 318
| | |||| |||||| ||| ||| |||| | || | | |||| | | ||||||| |
Sbjct 225 ACATGACTTTGTTGATCCATGTATAAAGC--A-AA-T-T-GCTAA-ACT--TGATCAAAT 275
Query 319 CGAGATATCTCAAGT-CTATCACTGCGATGGCTTATTGTTATGCATCGCCAAAGATAACT 377
|||| ||||| |||| || ||| |||||||| || ||||||||| ||| || || ||||
Sbjct 276 CGAGGTATCTAAAGTCCT-TCAATGCGATGGTTTGTTGTTATGCGTCGGTAAGGACAACT 334
Query 378 CGAGGC-TCTTTGTGTGGAATCCGTATCTAGGGCAAACCAA-ATGGATCCAACCAAGAAA 435
|||||| || | ||||||||||| ||| ||||||||| ||| | ||| ||||||||||
Sbjct 335 CGAGGCTTC-TAGTGTGGAATCCTTATTTAGGGCAAA-CAAGGTTTATCAAACCAAGAAA 392
Query 436 CAA-GTTCCACAAATAT-GACA-GGTTTGCTCTCGGATACGACAACAACCGTAACCACAA 492
|| ||| ||||| | || | ||| ||||||||||| ||||| |||| ||| ||||
Sbjct 393 -AAGGTTTAACAAA-CTCGA-ATGGTACGCTCTCGGATATGACAATAACCACAACTACAA 449
Query 493 AATCTTGAGGTTTCTTTATGATGAAGAGAACAACGAAAGC-TGTCGAAGAACTCACATTG 551
|||||||| | | |||||| | || | || | | | | | | || |
Sbjct 450 AATCTTGATG-AAC--TATGAT--ACAGGGC-AC-----CTTTTTG--G---TTAC---G 490
Query 552 ATGTATACGA-TTTCAGCTCTGATTCATGGAGGGTTCTTGATGTCAATCCTGACTGGGAT 610
| | ||||| ||| ||||||||||||||||||||||||||||||| ||| ||||| ||
Sbjct 491 AAATCTACGACTTT-AGCTCTGATTCATGGAGGGTTCTTGATGTCAGTCCCGACTGCCAT 549
Query 611 ATTATACCTTTTTATCG-CAGCGGCGTGTCTTTGAAGGGAAATACTTACTT-CTTCGGTC 668
|| | || ||| ||| ||| | |||||||||||| ||||| ||||| || ||| | ||
Sbjct 550 AT-A--CCGTTTCATCAACAGAG-CGTGTCTTTGAATGGAAACACTTATTTTCTT-GCTC 604
Query 669 AAGA-A-G-TAACAC---AAGC-GA-GTA-A-G--GTAACA-A--ACATTGAAAC-TTGT 712
|||| | | ||| ||| || | | | | ||| | | | ||||||| || |
Sbjct 605 AAGAGAAGATAATTGTGGAAGGAGAAGAAGAAGAAGTAGTAGATGAGATTGAAAAGTT-T 663
Query 713 TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGT-TTGCCTCTGCTGTTTCA 771
|||||||||||||||||||| |||||||| |||||||| ||| || ||||||| |||||
Sbjct 664 TTACTCTGTTTTGATTTTACTACAGAGAGGTTTGGACCGCGTCTT-CCTCTGCCATTTCA 722
Query 772 CCCTCCATGTCCTAGTTTTG-AAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCG 830
| || || | |||||| |||||||| || ||||||| ||||||||||| |||| |
Sbjct 723 C--TC--TGA--T-GTTTTGGAAACTGTGGCTATATCTTGTGTTAGAGATGATCAGCTTG 775
Query 831 CTGTGTTATA 840
| ||||||||
Sbjct 776 CGGTGTTATA 785
> AT1G67450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr1:25266163-25267359 FORWARD LENGTH=1197
Length=1197
Score = 108 bits (58), Expect = 3e-22
Identities = 355/488 (73%), Gaps = 62/488 (13%)
Strand=Plus/Plus
Query 41 GATCTATCAGAA-GATTTGGTAGGTGAGATTCTT-TCTTGGGTTCC-ATTTACATCTCTT 97
||||| || ||| |||||||||| |||||| || ||| ||||||| | | ||||||| |
Sbjct 19 GATCT-TCCGAATGATTTGGTAGAAGAGATT-TTGTCTAGGGTTCCGA-TAACATCTC-T 74
Query 98 A-CCGCAGTGCGATCTACTTGTAAAAAG-TGGAATGCTTTATCGAAAAATCACATCTTTG 155
| |||||| |||||||||| ||| | ||||| | |||||| ||| || | | ||
Sbjct 75 AGGAGCAGTGAGATCTACTTG-CAAACGATGGAACGGTTTATCCAAAGAT--CGT-ATT- 129
Query 156 GTA-GAAAAACAGCAT-C-AAGGAATCAGTTT-CTGGAGTTCATG-G---T-TGCA-GAT 205
||| | ||| || || | || || |||||| | || ||||| | | | || | ||
Sbjct 130 GTATGTAAAGGAG-ATGCAAATCAA-CAGTTTACAGG-GTTCACGAGATATGTGAACGAA 186
Query 206 TCTAGGGTTTGTTCTTTGAGA-TTAGATCTCCAA-GGAATCCGTAACGACGACGTAGAAG 263
|||| ||||||||| ||||| || ||||| || | ||||| || || ||||| | |
Sbjct 187 TCTACGGTTTGTTCAATGAGACTT-GATCT-TAATGAAATCCAAAATGAAGACGTTG-A- 242
Query 264 ACTACGTTGA-TTCATCTATGAAGCAGATAACTATACCTAATAATGATGATCAAGTCGAG 322
|||| ||||| || ||||| || |||||| ||| ||| | || | || | |||
Sbjct 243 ACTA-GTTGAGCTC-TCTATAAATAAGATAA--ATA---AAT--TTAT--TGAACTTGAG 291
Query 323 ATATCTCAAGTCTATCACTGCGATGGCTTATTGTTA-T-GCATCGCCA-AAGATA-ACTC 378
||| |||||| ||| || |||||||||| |||||| | | | | | || || | ||
Sbjct 292 TTATTTCAAGTTTATTACAGCGATGGCTTGTTGTTATTGGTAAC-TGATGAGGTAGATTC 350
Query 379 GAGGCTCTTTGTGTGGAATCCGTATCTAGGG-CAAACCAAATGGATCCAA-CCA-AGAAA 435
| | || | || |||||||||||| | ||| ||||||| | ||||||| || ||| |
Sbjct 351 CAAGATCGTGGTTTGGAATCCGTAT-TTGGGACAAACCAGGTTGATCCAATGCAGAGATA 409
Query 436 C-AAG--TTCCACAAATATGACAGGTTTGCTCTCGGATACGACAACAACCGTAACCACAA 492
| || || ||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 410 CTGAGCATT--TCAAATAT---AGGTATGCTCTCGGATACGACAACAACCGTAACCACAA 464
Query 493 AATCTTGA 500
||||||||
Sbjct 465 AATCTTGA 472
Score = 71.3 bits (38), Expect = 3e-11
Identities = 40/41 (98%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1270 TGCTCTTGGATACGACAACAACCGTAACCACAAAATCTTGA 1310
|||||| ||||||||||||||||||||||||||||||||||
Sbjct 432 TGCTCTCGGATACGACAACAACCGTAACCACAAAATCTTGA 472
> AT5G36730.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14436317-14437549 FORWARD LENGTH=1233
Length=1233
Score = 97.1 bits (52), Expect = 6e-19
Identities = 100/122 (82%), Gaps = 8/122 (7%)
Strand=Plus/Plus
Query 719 TGTTTTGATTTTACAACAGAGAGATTTGGACCACGT-TTGCCTCTGCTGTTTCACCCTCC 777
|||||||||||||||||||||||||||||||| ||| || | ||||| ||||||| |||
Sbjct 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTT-CATCTGCCGTTTCACTCTC- 772
Query 778 ATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGTGTT 837
|| | || |||| ||||||||||| || | |||||||| ||| |||| || |||||
Sbjct 773 --GT--T-GTGTTGATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTT 827
Query 838 AT 839
||
Sbjct 828 AT 829
> AT5G36820.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14495617-14496849 FORWARD LENGTH=1233
Length=1233
Score = 97.1 bits (52), Expect = 6e-19
Identities = 100/122 (82%), Gaps = 8/122 (7%)
Strand=Plus/Plus
Query 719 TGTTTTGATTTTACAACAGAGAGATTTGGACCACGT-TTGCCTCTGCTGTTTCACCCTCC 777
|||||||||||||||||||||||||||||||| ||| || | ||||| ||||||| |||
Sbjct 715 TGTTTTGATTTTACAACAGAGAGATTTGGACCGCGTCTT-CATCTGCCGTTTCACTCTC- 772
Query 778 ATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGTGTT 837
|| | || |||| ||||||||||| || | |||||||| ||| |||| || |||||
Sbjct 773 --GT--T-GTGTTGATACTGTGACTCTCGCTAGTGTTAGAGAAGAGCAGCTTGCGGTGTT 827
Query 838 AT 839
||
Sbjct 828 AT 829
> AT1G25150.1 | Symbols: | F-box family protein | chr1:8821008-8822533
FORWARD LENGTH=1526
Length=1526
Score = 82.4 bits (44), Expect = 2e-14
Identities = 101/128 (79%), Gaps = 6/128 (5%)
Strand=Plus/Plus
Query 713 TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCAC 772
|||||||||||||||||||||||||||| |||||| | ||| ||||||| | |||||||
Sbjct 761 TTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCAC 820
Query 773 CCTCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCT 832
|| | | || | | || ||||||| || ||||| |||||||| || |||||||
Sbjct 821 TCTAC-TATCG-A-TGC-GA--CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 874
Query 833 GTGTTATA 840
||| ||||
Sbjct 875 GTGCTATA 882
> AT1G25055.1 | Symbols: | F-box family protein | chr1:8806607-8808156
FORWARD LENGTH=1550
Length=1550
Score = 82.4 bits (44), Expect = 2e-14
Identities = 101/128 (79%), Gaps = 6/128 (5%)
Strand=Plus/Plus
Query 713 TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCAC 772
|||||||||||||||||||||||||||| |||||| | ||| ||||||| | |||||||
Sbjct 784 TTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCAC 843
Query 773 CCTCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCT 832
|| | | || | | || ||||||| || ||||| |||||||| || |||||||
Sbjct 844 TCTAC-TATCG-A-TGC-GA--CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 897
Query 833 GTGTTATA 840
||| ||||
Sbjct 898 GTGCTATA 905
> AT1G24881.1 | Symbols: | F-box family protein | chr1:8784036-8785634
FORWARD LENGTH=1599
Length=1599
Score = 82.4 bits (44), Expect = 2e-14
Identities = 101/128 (79%), Gaps = 6/128 (5%)
Strand=Plus/Plus
Query 713 TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCAC 772
|||||||||||||||||||||||||||| |||||| | ||| ||||||| | |||||||
Sbjct 826 TTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCAC 885
Query 773 CCTCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCT 832
|| | | || | | || ||||||| || ||||| |||||||| || |||||||
Sbjct 886 TCTAC-TATCG-A-TGC-GA--CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 939
Query 833 GTGTTATA 840
||| ||||
Sbjct 940 GTGCTATA 947
> AT1G25211.1 | Symbols: | F-box family protein | chr1:8835386-8837007
FORWARD LENGTH=1622
Length=1622
Score = 82.4 bits (44), Expect = 2e-14
Identities = 101/128 (79%), Gaps = 6/128 (5%)
Strand=Plus/Plus
Query 713 TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCAC 772
|||||||||||||||||||||||||||| |||||| | ||| ||||||| | |||||||
Sbjct 761 TTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCAC 820
Query 773 CCTCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCT 832
|| | | || | | || ||||||| || ||||| |||||||| || |||||||
Sbjct 821 TCTAC-TATCG-A-TGC-GA--CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 874
Query 833 GTGTTATA 840
||| ||||
Sbjct 875 GTGCTATA 882
> AT1G24800.1 | Symbols: | F-box family protein | chr1:8769660-8771251
FORWARD LENGTH=1592
Length=1592
Score = 82.4 bits (44), Expect = 2e-14
Identities = 101/128 (79%), Gaps = 6/128 (5%)
Strand=Plus/Plus
Query 713 TTACTCTGTTTTGATTTTACAACAGAGAGATTTGGACCACGTTTGCCTCTGCTGTTTCAC 772
|||||||||||||||||||||||||||| |||||| | ||| ||||||| | |||||||
Sbjct 823 TTACTCTGTTTTGATTTTACAACAGAGACATTTGGTCTGCGTCTGCCTCTTCCGTTTCAC 882
Query 773 CCTCCATGTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCT 832
|| | | || | | || ||||||| || ||||| |||||||| || |||||||
Sbjct 883 TCTAC-TATCG-A-TGC-GA--CTGTGACCCTCTCTTGTGTTAGAGACCAGCAGCTCGCG 936
Query 833 GTGTTATA 840
||| ||||
Sbjct 937 GTGCTATA 944
> AT3G16880.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:5766733-5767830 FORWARD LENGTH=1098
Length=1098
Score = 75.0 bits (40), Expect = 3e-12
Identities = 94/119 (79%), Gaps = 8/119 (7%)
Strand=Plus/Plus
Query 721 TTTTGATTTTACAACAGAGAGATTTGGACC-ACGTTTGCCTCTGCTGTTTCACCCTCCAT 779
|||||||||||||||||||||||||||||| || | ||||||||| ||| ||| |||
Sbjct 657 TTTTGATTTTACAACAGAGAGATTTGGACCGAC-TCTGCCTCTGCCGTTCCACTCTC--- 712
Query 780 GTCCTAGTTTTGAAACTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGTGTTA 838
|| | || || | |||| |||| ||| | |||||||| ||||| || || ||||||
Sbjct 713 GT--T-GTGGAGATATTGTGGCTCTCTCTAGTGTTAGAGAAGAGAAACTTGCAGTGTTA 768
> AT3G25225.1 | Symbols: | pseudogene, hypothetical protein |
chr3:9184970-9186171 FORWARD LENGTH=1202
Length=1202
Score = 71.3 bits (38), Expect = 3e-11
Identities = 44/47 (94%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 988 GAGCTTCTTCATTGACGAGGAGAAGAAAGTCGTTGTGCTTTTTGATA 1034
||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct 998 GAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGATA 1044
Score = 67.6 bits (36), Expect = 4e-10
Identities = 46/51 (90%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 557 TACGATTTCAGCTCTGATTCATGGAGGGTTCTTGATGTCAATCCTGACTGG 607
|||||||| | ||||||||||||||||||||||||||||| ||| || |||
Sbjct 594 TACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACTCCAGATTGG 644
> AT3G22770.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8047684-8048667 REVERSE LENGTH=984
Length=984
Score = 65.8 bits (35), Expect = 2e-09
Identities = 44/48 (92%), Gaps = 2/48 (4%)
Strand=Plus/Plus
Query 988 GAGCTTCTTCATTGACGAGGAGAAGAAAGTCGTTGT-GCTTTTTGATA 1034
||| |||||||||||||||||||||||||||| ||| | |||||||||
Sbjct 798 GAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTTG-TTTTTGATA 844
> AT3G16820.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:5728016-5729174 REVERSE LENGTH=942
Length=942
Score = 60.2 bits (32), Expect = 7e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 719 TGTTTTGATTTTACAACAGAGAGATTTGGACC 750
||||||||||||||||||||||||||||||||
Sbjct 505 TGTTTTGATTTTACAACAGAGAGATTTGGACC 536
> AT5G60560.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:24345949-24347172 FORWARD LENGTH=1125
Length=1125
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 992 TTCTTCATTGACGAGGAGAAGAAAGTCG 1019
||||||||||||||||||||||||||||
Sbjct 937 TTCTTCATTGACGAGGAGAAGAAAGTCG 964
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 992 TTCTTCATTGACGAGGAGAAGAAAGTCG 1019
||||||||||||||||||||||||||||
Sbjct 433 TTCTTCATTGACGAGGAGAAGAAAGTCG 460
> AT3G25090.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:9140039-9141094 REVERSE LENGTH=978
Length=978
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 992 TTCTTCATTGACGAGGAGAAGAAAGTCG 1019
||||||||||||||||||||||||||||
Sbjct 745 TTCTTCATTGACGAGGAGAAGAAAGTCG 772
> AT3G20690.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7231570-7232682 REVERSE LENGTH=1113
Length=1113
Score = 52.8 bits (28), Expect = 1e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 632 GGCGTGTCTTTGAAGGGAAATACTTACT 659
||||||||||||||||||||||||||||
Sbjct 610 GGCGTGTCTTTGAAGGGAAATACTTACT 637
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99648081825
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5